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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044612 ID=TCONS_00044612|Name=TCONS_00044612|organism=Clytia hemisphaerica|type=transcript|length=201bp
CAACTTTCATTTTTCTGGCAATTTTAACGATCGttgatttgtctttttta
gAGGTTACAAATAAATGCATAAAAGGAATACCAGAAAATATCCATGGAGC
TAAGCCACAAATATCGATCGAAGAAATGAAAGCCAGATCTGGTGGATTTA
TTACAAGCATTGCACGGCAGTCTACCGAATGGGAAATCTCTTTCACCGTC
A Run BLAST on NCBI transcript from alignment at sc0005876:1723..3248+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044612 ID=TCONS_00044612|Name=TCONS_00044612|organism=Clytia hemisphaerica|type=transcript|length=1526bp|location=Sequence derived from alignment at sc0005876:1723..3248+ (Clytia hemisphaerica)
CAACTTTCATTTTTCTGGCAATTTTAACGATCGttgatttgtctttttta
gAGGTTACAAATAAATGCATAGTAAGTACAAATACGGTCCAAAAAGACCG
GACAAGGCCATTTTCTAGAAAAGCAGTATGGTGTCCGCTAGCATTTTTCT
TCTACTGGTGTTTTTTATAAAAGGGACTTATATAACAAGATTTTGCTGAG
AGAGGAGAGAGGCATacggggccgtccacatagtacgtacgcactaaaat
gccGAAAATTGAGTAACTTCTCACCCcatgtacgcaagcgtacgcaaatg
gatgtaccccctggtaagtacgtactttttcattcaccgCCCCTCCCCTC
GTTTGAATAaattttcgaattcaaatcatttggttcggacctttatttca
tacatgaaactcaatgtttattaagaaacttttccTTGATGggtataaga
agcgtaaaagtcgacagaaaaacaagcgaaaaaaggctatgaaaaatttc
tcttcgtacgtacattttcctttgacccctcccctcccccagtacgcaag
catatgcttttgagaagaccccctcccccctttagtgcgtacgtaccaTG
TGAGCGGCCCCTACATCGCTGTGAGTTTGATTATGTTTAATCTGAATTAT
TTTTCTAGAAAGGAATACCAGAAAATATCCATGGAGCTAAGCCACAAATA
TCGATCGAAGGTAAAAAAGGctctttgagaaaaatttttgtacatggggg
tggatttccaaaaaatgttatataatccacccccatattcaaattttttc
ttggaatgccaaataaatattttctgaaAAGACGAAGGAGAGAGAAAAAT
CTTAAACCATTCCCATGCAAGCAAAGTGAAGGCTTCTTAGAATTTTCTGC
ATTTCAGATGGTGGATTGGGGTTAgcactttctttttgttttggcGTTTT
TCGAATTCTGCTGGCAGATATTACTTCCAATATTATGGGCCATCTGAATT
TCTAGTGAGACGGGGACAACTCTTTACAAGTTTGTTGATAAGAACGTCTA
AGATTTTaatccttcggatgttcttaactttttgaatttaggcctaaaaa
tgttcttaaattattcCCTATTTTCTGTGTATTTTCGTTCTTAATATTTT
CGtcgtcgaagccttatgttctttatAGCTTGTTCTTctatattgggctc
ttccagaaaatgtccgtacatgggggtggaggatatagtgtccggggggt
agcgaaaaatcataaaaatttgccttgtccggggggtaaacttgctctgt
ccggggggtaatttgggttatCCGGGAGGTTTtcatcactgaaaattgtt
atatcctccaccccccatattccAATTTTTTCTGGGAAAACCCATTAAAA
TAATTGTACATACTTAGCTGGTCtattaaagaaatttttctgtCTTAGAA
ATGAAAGCCAGATCTGGTGGATTTATTACAAGCATTGCACGGCAGTCTAC
CGAATGGGAAATCTCTTTCACCGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044612-exon-sc0005876-1491911889:1723..1793 | TCONS_00044612-exon-sc0005876-1491911889:1723..1793 | Clytia hemisphaerica | exon |
| TCONS_00044612-exon-sc0005876-1510915933:1723..1793 | TCONS_00044612-exon-sc0005876-1510915933:1723..1793 | Clytia hemisphaerica | exon |
| TCONS_00044612-exon-sc0005876-1575043694:1723..1793 | TCONS_00044612-exon-sc0005876-1575043694:1723..1793 | Clytia hemisphaerica | exon |
| TCONS_00044612-exon-sc0005876-1491911889:2381..2432 | TCONS_00044612-exon-sc0005876-1491911889:2381..2432 | Clytia hemisphaerica | exon |
| TCONS_00044612-exon-sc0005876-1510915933:2381..2432 | TCONS_00044612-exon-sc0005876-1510915933:2381..2432 | Clytia hemisphaerica | exon |
| TCONS_00044612-exon-sc0005876-1575043694:2381..2432 | TCONS_00044612-exon-sc0005876-1575043694:2381..2432 | Clytia hemisphaerica | exon |
| TCONS_00044612-exon-sc0005876-1491911889:3171..3248 | TCONS_00044612-exon-sc0005876-1491911889:3171..3248 | Clytia hemisphaerica | exon |
| TCONS_00044612-exon-sc0005876-1510915933:3171..3248 | TCONS_00044612-exon-sc0005876-1510915933:3171..3248 | Clytia hemisphaerica | exon |
| TCONS_00044612-exon-sc0005876-1575043694:3171..3248 | TCONS_00044612-exon-sc0005876-1575043694:3171..3248 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005876 | supercontig | sc0005876:1723..3248 + |
Blast
The following BLAST results are available for this feature:
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