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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044618 ID=TCONS_00044618|Name=TCONS_00044618|organism=Clytia hemisphaerica|type=transcript|length=903bp
ATACTATACTGAAAGAAGAAGATGTCCCTGGTGCAAAATTAACCAAAAAG
CCAGAAAATTGTATTGTGGAGGAGCTGAAGAGGTGGCTTGAGTGCcatgg
actgaaaaaatctggAAGGAAACAGGAACTGGTGAAGAGAGTGGAAGATG
CCCTTAAGATGAATCTTCCTGTCACCCCTAAAGTTGATGGTGGACGTTGG
TACAAAATTAAGCTAGATAAGAGTAAAGAAGGGCAACAAGCAACGTCATC
AAGCTCTGCTGATAACACAACTACAGAACGACCCACTGATGGCTGGAGAG
ACTTTCCATCCAGAAATTTACCAGCAAATTTCAATTATGGTCATGTATAC
TTTTATTTAGTTGAATCAATTTCAACTGCTGCTGGAGTACCAGATGATAG
CGATGACCCAGATGATGACAACCTTTACGATAATTGTGACACTGTCACAG
CAAAACCCCTgagaaaaggaagaaatttgtTGAACAGTGAAGGTTACATA
GAAAACATCCACGATAATTATAATCAAGCAAAGGAAGAATACTACATTCG
AGCCCATGTCCATCATTCGATGAAAGGTAGTGAATATCCATTAAATGTTG
CCCTCACCATCAGTAACGTTAGTGGCAGTATAAAAAATGGAACTTGTGAT
TGTAAAGCTAGTGCCCTTAGTAGATGTGCCCATGTTTCGGCATTACTGTT
ATATCTGAGTGACAAAGCAAGCAGTAATAAACTGCTCATACAACCCTCAA
CATCAAAAGAGTGCCCATGGGATAAGGGGAAAAAACGAGAGAAGGATCCT
GGTAAGCTCCATGAAGCAGTATATCCTTCAAGTAAACGCAGACCTCCATC
TGAACTCTACTATTTCGATCCGAGACCAGAGAATCAACGTACTGTGCCTG
AGG Run BLAST on NCBI protein sequence of TCONS_00044618-protein >TCONS_00044618-protein ID=TCONS_00044618-protein|Name=TCONS_00044618-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
TILKEEDVPGAKLTKKPENCIVEELKRWLECHGLKKSGRKQELVKRVEDA
LKMNLPVTPKVDGGRWYKIKLDKSKEGQQATSSSSADNTTTERPTDGWRD
FPSRNLPANFNYGHVYFYLVESISTAAGVPDDSDDPDDDNLYDNCDTVTA
KPLRKGRNLLNSEGYIENIHDNYNQAKEEYYIRAHVHHSMKGSEYPLNVA
LTISNVSGSIKNGTCDCKASALSRCAHVSALLLYLSDKASSNKLLIQPST
SKECPWDKGKKREKDPGKLHEAVYPSSKRRPPSELYYFDPRPENQRTVPE Run BLAST on NCBI transcript from alignment at sc0005885:16..918 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044618 ID=TCONS_00044618|Name=TCONS_00044618|organism=Clytia hemisphaerica|type=transcript|length=903bp|location=Sequence derived from alignment at sc0005885:16..918 (Clytia hemisphaerica)
CCTCAGGCACAGTACGTTGATTCTCTGGTCTCGGATCGAAATAGTAGAGT
TCAGATGGAGGTCTGCGTTTACTTGAAGGATATACTGCTTCATGGAGCTT
ACCAGGATCCTTCTCTCGTTTTTTCCCCTTATCCCATGGGCACTCTTTTG
ATGTTGAGGGTTGTATGAGCAGTTTATTACTGCTTGCTTTGTCACTCAGA
TATAACAGTAATGCCGAAACATGGGCACATCTACTAAGGGCACTAGCTTT
ACAATCACAAGTTCCATTTTTTATACTGCCACTAACGTTACTGATGGTGA
GGGCAACATTTAATGGATATTCACTACCTTTCATCGAATGATGGACATGG
GCTCGAATGTAGTATTCTTCCTTTGCTTGATTATAATTATCGTGGATGTT
TTCTATGTAACCTTCACTGTTCAacaaatttcttccttttctcAGGGGTT
TTGCTGTGACAGTGTCACAATTATCGTAAAGGTTGTCATCATCTGGGTCA
TCGCTATCATCTGGTACTCCAGCAGCAGTTGAAATTGATTCAACTAAATA
AAAGTATACATGACCATAATTGAAATTTGCTGGTAAATTTCTGGATGGAA
AGTCTCTCCAGCCATCAGTGGGTCGTTCTGTAGTTGTGTTATCAGCAGAG
CTTGATGACGTTGCTTGTTGCCCTTCTTTACTCTTATCTAGCTTAATTTT
GTACCAACGTCCACCATCAACTTTAGGGGTGACAGGAAGATTCATCTTAA
GGGCATCTTCCACTCTCTTCACCAGTTCCTGTTTCCTTccagattttttc
agtccatgGCACTCAAGCCACCTCTTCAGCTCCTCCACAATACAATTTTC
TGGCTTTTTGGTTAATTTTGCACCAGGGACATCTTCTTCTTTCAGTATAG
TAT Coding sequence (CDS) from alignment at sc0005885:16..918 >TCONS_00044618 ID=TCONS_00044618|Name=TCONS_00044618|organism=Clytia hemisphaerica|type=CDS|length=900bp|location=Sequence derived from alignment at sc0005885:16..918 (Clytia hemisphaerica)
CTCAGGCACAGTACGTTGATTCTCTGGTCTCGGATCGAAATAGTAGAGTT
CAGATGGAGGTCTGCGTTTACTTGAAGGATATACTGCTTCATGGAGCTTA
CCAGGATCCTTCTCTCGTTTTTTCCCCTTATCCCATGGGCACTCTTTTGA
TGTTGAGGGTTGTATGAGCAGTTTATTACTGCTTGCTTTGTCACTCAGAT
ATAACAGTAATGCCGAAACATGGGCACATCTACTAAGGGCACTAGCTTTA
CAATCACAAGTTCCATTTTTTATACTGCCACTAACGTTACTGATGGTGAG
GGCAACATTTAATGGATATTCACTACCTTTCATCGAATGATGGACATGGG
CTCGAATGTAGTATTCTTCCTTTGCTTGATTATAATTATCGTGGATGTTT
TCTATGTAACCTTCACTGTTCAacaaatttcttccttttctcAGGGGTTT
TGCTGTGACAGTGTCACAATTATCGTAAAGGTTGTCATCATCTGGGTCAT
CGCTATCATCTGGTACTCCAGCAGCAGTTGAAATTGATTCAACTAAATAA
AAGTATACATGACCATAATTGAAATTTGCTGGTAAATTTCTGGATGGAAA
GTCTCTCCAGCCATCAGTGGGTCGTTCTGTAGTTGTGTTATCAGCAGAGC
TTGATGACGTTGCTTGTTGCCCTTCTTTACTCTTATCTAGCTTAATTTTG
TACCAACGTCCACCATCAACTTTAGGGGTGACAGGAAGATTCATCTTAAG
GGCATCTTCCACTCTCTTCACCAGTTCCTGTTTCCTTccagattttttca
gtccatgGCACTCAAGCCACCTCTTCAGCTCCTCCACAATACAATTTTCT
GGCTTTTTGGTTAATTTTGCACCAGGGACATCTTCTTCTTTCAGTATAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044618-exon-sc0005885-1491911889:16..918 | TCONS_00044618-exon-sc0005885-1491911889:16..918 | Clytia hemisphaerica | exon |
| TCONS_00044618-exon-sc0005885-1510915933:16..918 | TCONS_00044618-exon-sc0005885-1510915933:16..918 | Clytia hemisphaerica | exon |
| TCONS_00044618-exon-sc0005885-1575043694:16..918 | TCONS_00044618-exon-sc0005885-1575043694:16..918 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005885 | supercontig | sc0005885:16..918 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008270 |
zinc ion binding |
Blast
The following BLAST results are available for this feature:
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