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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044671 ID=TCONS_00044671|Name=TCONS_00044671|organism=Clytia hemisphaerica|type=transcript|length=1457bp
ttcttgttgaatggtttgcgcggcattttccaacattgtctcaaacattt
attttgttgcattacaacggcttctttcttttgtttatttttcaaatcac
gcgttcgaaatcatattcaatgttcgattagcaatgcaatgtcttccttC
TAGGGAAACCCCGAGTTGAATGTTTGAAAGAATTATGAACTTGttcaaac
attgtttcaaacatattttttgatctttttgttgaaaagatacgaTTTTT
GACTCCGCAAACCGTCAAACATcgatttcaaacatgaaacgtcacgatgt
ttgaagaaaaatgtttgacggtttgctcccagcttaaGTTTCAATTGACG
ATTAAAGGATTGAAAAAGTTGAGCATTTAATGATTTCATCTCTGCTGTTT
TTTCAAGTCTTAtgtacaaaaaaaatttacatattcAGATATCTTAAGCA
CCcgcaaaaaaaacacaaaaatgtggtaaaaaaatttgaaatttcaatga
aatcaAATACTTGATAAGATAGTCACCAGTGCTTCCATATGACTTTAATC
ATAGAAGTCACcattgtcaaaataaaaaaNAAATTTCAATGAAATCAAAT
ACTTGATAAGATAGTCACCAGTGCTTCCATATGACTTTAATCATAGAAGT
CACcattgtcaaaataaaaaataaggtAACTATAAATCATACACAAAATG
CAAATATAATAATGAAAAGCTAGGAGAGGAGAGGAAAAAGATAATAATTT
CGGGACACATTTTGAATAATATATATCTatatattgaaaatattgtttct
ttcattttactTGGCGCTTGGATCAAGTTGATTGCCAACTAGTTTCGACG
ATAGCTTGTACTTTCTTTTCGTATTCACGTTTGTTCTCTTGATAAAGTTG
TGCAGCTAAACTGTTGGCAGGGCTGTTCGGATTTGGCTCGTCTAACAATG
ACTGTCAAGAAAGAGACGTGTTACTTTTAGATTATTTGGTTCACAACGAA
CGGGAAAGGCTGTGatgtttttaaccaaaaaagtTTGTAATCTATACACG
GATAGTTGGAGAAAGTAGTCAATTTAAATGTGTCGGTTTGAGCTGGCTGT
TAGGGTTATATGCAAAAGGATAATGCCTGAAATGTGAAGGAGCCCGATAT
TTGTTGGATAAATTTTAGCCCAAAAAACAGCTAACAAAtggattttttta
taatttgttaGAAATTGCATCATTATTTGTTTCCATAAAAGTAGGGGTGC
CACCGCAGTTTTATTCCATCATCGGACGTAGACCTGGTTTATTAGCGGTC
GAAGACCTTAATTAACGGCCGAAGACTTGAATTAACGTCCCCCTCTTTGA
AAGTGAATTTTATCAAGTTCTATGAACTGTTGTTAAAGAAGCAATCCTAT
TTTTCGGAAAGAgaaaggataaacttaaattttaagcGGTCATTTGTCAA
AAAAAGT Run BLAST on NCBI transcript from alignment at sc0005985:21..1477- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044671 ID=TCONS_00044671|Name=TCONS_00044671|organism=Clytia hemisphaerica|type=transcript|length=1457bp|location=Sequence derived from alignment at sc0005985:21..1477- (Clytia hemisphaerica)
TTCTTGTTGAATGGTTTGCGCGGCATTTTCCAACATTGTCTCAAACATTT
ATTTTGTTGCATTACAACGGCTTCTTTCTTTTGTTTATTTTTCAAATCAC
GCGTTCGAAATCATATTCAATGTTCGATTAGCAATGCAATGTCTTCCTTC
TAGGGAAACCCCGAGTTGAATGTTTGAAAGAATTATGAACTTGTTCAAAC
ATTGTTTCAAACATATTTTTTGATCTTTTTGTTGAAAAGATACGATTTTT
GACTCCGCAAACCGTCAAACATCGATTTCAAACATGAAACGTCACGATGT
TTGAAGAAAAATGTTTGACGGTTTGCTCCCAGCTTAAGTTTCAATTGACG
ATTAAAGGATTGAAAAAGTTGAGCATTTAATGATTTCATCTCTGCTGTTT
TTTCAAGTCTTATGTACAAAAAAAATTTACATATTCAGATATCTTAAGCA
CCCGCAAAAAAAACACAAAAATGTGGTAAAAAAATTTGAAATTTCAATGA
AATCAAATACTTGATAAGATAGTCACCAGTGCTTCCATATGACTTTAATC
ATAGAAGTCACCATTGTCAAAATAAAAAANAAATTTCAATGAAATCAAAT
ACTTGATAAGATAGTCACCAGTGCTTCCATATGACTTTAATCATAGAAGT
CACCATTGTCAAAATAAAAAATAAGGTAACTATAAATCATACACAAAATG
CAAATATAATAATGAAAAGCTAGGAGAGGAGAGGAAAAAGATAATAATTT
CGGGACACATTTTGAATAATATATATCTATATATTGAAAATATTGTTTCT
TTCATTTTACTTGGCGCTTGGATCAAGTTGATTGCCAACTAGTTTCGACG
ATAGCTTGTACTTTCTTTTCGTATTCACGTTTGTTCTCTTGATAAAGTTG
TGCAGCTAAACTGTTGGCAGGGCTGTTCGGATTTGGCTCGTCTAACAATG
ACTGTCAAGAAAGAGACGTGTTACTTTTAGATTATTTGGTTCACAACGAA
CGGGAAAGGCTGTGATGTTTTTAACCAAAAAAGTTTGTAATCTATACACG
GATAGTTGGAGAAAGTAGTCAATTTAAATGTGTCGGTTTGAGCTGGCTGT
TAGGGTTATATGCAAAAGGATAATGCCTGAAATGTGAAGGAGCCCGATAT
TTGTTGGATAAATTTTAGCCCAAAAAACAGCTAACAAATGGATTTTTTTA
TAATTTGTTAGAAATTGCATCATTATTTGTTTCCATAAAAGTAGGGGTGC
CACCGCAGTTTTATTCCATCATCGGACGTAGACCTGGTTTATTAGCGGTC
GAAGACCTTAATTAACGGCCGAAGACTTGAATTAACGTCCCCCTCTTTGA
AAGTGAATTTTATCAAGTTCTATGAACTGTTGTTAAAGAAGCAATCCTAT
TTTTCGGAAAGAGAAAGGATAAACTTAAATTTTAAGCGGTCATTTGTCAA
AAAAAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044671-exon-sc0005985-1575043694:21..1477 | TCONS_00044671-exon-sc0005985-1575043694:21..1477 | Clytia hemisphaerica | exon |
| TCONS_00044671-exon-sc0005985-1510915933:21..1477 | TCONS_00044671-exon-sc0005985-1510915933:21..1477 | Clytia hemisphaerica | exon |
| TCONS_00044671-exon-sc0005985-1491911889:21..1477 | TCONS_00044671-exon-sc0005985-1491911889:21..1477 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005985 | supercontig | sc0005985:21..1477 - |
Blast
The following BLAST results are available for this feature:
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