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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044938 ID=TCONS_00044938|Name=TCONS_00044938|organism=Clytia hemisphaerica|type=transcript|length=906bp
CTAGTATCTGGAGATATTTGACCAGGACGAACTCAACTCAAAATCGAAAA
CATTGCAAGTGAAAATTGCACGGAACTTTCATGGCCTCAGTTCAGAAAAC
AGAATCAAAAATGAACACAAAGAGTGGGATTGTTATAAGTTTATTGCAAG
ATGATTATTTTAAACGCCATAacaaatattgtatttttataaataatgga
tttttcgtttttttaaatTACGTTTAATCTAATATAAAATGTCTATACAA
ATATTTATTGCTGTAAAATGACCAAGGCTTAATTGGGCAATGTGCCACAG
GTCCCTGGCGTATTTCCTCAAATAAGCGCCGTGGTGCCCCTTATATTTAC
AAGATTTGGGATGTGGCCACACTCGATTTCAGTTCCTTAGTATGCCTTTa
cgattctgatagcgctcacattttcaaaatttaaattgatctgcaataat
tttaaaatatttcaagatacaaagaaatattaattttaCTACcatagttt
agtttttttttagcattttataCTTTTGCTCTATTCCAATAgctttaaaa
tttcttattacaagtTCAAAAGAGTAAAGAATCtatcaaaaagtcaaatt
ttggaTCTATAATTTTCACACAGCAAAAAAGAAAGGCTTCTTTAGTCATC
CCTTTGGAGCTTTAAATTGGCTAGGAGTTTGAAGTTGTTAATTTTAAAAc
tacaaaatctacaaaaaaaaacgaaaagtttaaaaatttcggttttaata
aatatattttagttaaaaagaACGAAACTTTGGATCTATAAATGCCAAGA
TTATATCAAACTTCATTGGATGTGTTGAAAACATTCGTTACATTATGTCG
TATGAATAGAAGTCGAGAGTActtaatagccgcccccccccccgcttatt
aatttt Run BLAST on NCBI transcript from alignment at sc0006498:2..907 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044938 ID=TCONS_00044938|Name=TCONS_00044938|organism=Clytia hemisphaerica|type=transcript|length=906bp|location=Sequence derived from alignment at sc0006498:2..907 (Clytia hemisphaerica)
aaaattaataagcgggggggggggcggctattaagTACTCTCGACTTCTA
TTCATACGACATAATGTAACGAATGTTTTCAACACATCCAATGAAGTTTG
ATATAATCTTGGCATTTATAGATCCAAAGTTTCGTtctttttaactaaaa
tatatttattaaaaccgaaatttttaaacttttcgtttttttttgtagat
tttgtagTTTTAAAATTAACAACTTCAAACTCCTAGCCAATTTAAAGCTC
CAAAGGGATGACTAAAGAAGCCTTTCTTTTTTGCTGTGTGAAAATTATAG
AtccaaaatttgactttttgataGATTCTTTACTCTTTTGAacttgtaat
aagaaattttaaagcTATTGGAATAGAGCAAAAGtataaaatgctaaaaa
aaaactaaactatgGTAGtaaaattaatatttctttgtatcttgaaatat
tttaaaattattgcagatcaatttaaattttgaaaatgtgagcgctatca
gaatcgtAAAGGCATACTAAGGAACTGAAATCGAGTGTGGCCACATCCCA
AATCTTGTAAATATAAGGGGCACCACGGCGCTTATTTGAGGAAATACGCC
AGGGACCTGTGGCACATTGCCCAATTAAGCCTTGGTCATTTTACAGCAAT
AAATATTTGTATAGACATTTTATATTAGATTAAACGTAatttaaaaaaac
gaaaaatccattatttataaaaatacaatatttgtTATGGCGTTTAAAAT
AATCATCTTGCAATAAACTTATAACAATCCCACTCTTTGTGTTCATTTTT
GATTCTGTTTTCTGAACTGAGGCCATGAAAGTTCCGTGCAATTTTCACTT
GCAATGTTTTCGATTTTGAGTTGAGTTCGTCCTGGTCAAATATCTCCAGA
TACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044938-exon-sc0006498-1491911889:2..907 | TCONS_00044938-exon-sc0006498-1491911889:2..907 | Clytia hemisphaerica | exon |
| TCONS_00044938-exon-sc0006498-1510915933:2..907 | TCONS_00044938-exon-sc0006498-1510915933:2..907 | Clytia hemisphaerica | exon |
| TCONS_00044938-exon-sc0006498-1575043694:2..907 | TCONS_00044938-exon-sc0006498-1575043694:2..907 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006498 | supercontig | sc0006498:2..907 . |
Blast
The following BLAST results are available for this feature:
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