TCONS_00045078 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045078
Unique NameTCONS_00045078
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length195

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045078 ID=TCONS_00045078|Name=TCONS_00045078|organism=Clytia hemisphaerica|type=transcript|length=195bp
ACCTGGAAAGCCAGTAaaactaaaaaacaaaacaatgggaccaaaatatt
cttcattttGTATTCTCCGAGTTCTATACAAGTAAAGTACCTTGTAATTT
GCAATTGAAATGAAAGCAAAGTGAATCTTTTAAACAGTTGCTCGGTGATA
AAGTTAGAAAGTATACGAGAATTTCATGCCTTTAAGTCACACAGG
Run BLAST on NCBI

transcript from alignment at sc0006844:1106..1300

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045078 ID=TCONS_00045078|Name=TCONS_00045078|organism=Clytia hemisphaerica|type=transcript|length=195bp|location=Sequence derived from alignment at sc0006844:1106..1300 (Clytia hemisphaerica)
CCTGTGTGACTTAAAGGCATGAAATTCTCGTATACTTTCTAACTTTATCA
CCGAGCAACTGTTTAAAAGATTCACTTTGCTTTCATTTCAATTGCAAATT
ACAAGGTACTTTACTTGTATAGAACTCGGAGAATACaaaatgaagaatat
tttggtcccattgttttgttttttagtttTACTGGCTTTCCAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028661XLOC_028661Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045078-exon-sc0006844-1491911889:1106..1300TCONS_00045078-exon-sc0006844-1491911889:1106..1300Clytia hemisphaericaexon
TCONS_00045078-exon-sc0006844-1510915933:1106..1300TCONS_00045078-exon-sc0006844-1510915933:1106..1300Clytia hemisphaericaexon
TCONS_00045078-exon-sc0006844-1575043694:1106..1300TCONS_00045078-exon-sc0006844-1575043694:1106..1300Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006844supercontigsc0006844:1106..1300 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045078 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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