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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045081 ID=TCONS_00045081|Name=TCONS_00045081|organism=Clytia hemisphaerica|type=transcript|length=1319bp
AACCGAATGAGGATGTAGAGCCACTTGTGGAACAATTCTTTCATTTTGGA
ATTTCCATTCATGTTGCAACAATCTCGATCTGTATACAATACTTTTGGAG
GTTCAACATTAGCACTTTCATATCGAGACATGATTCCCTCAGCCATGGTT
GCAAGCATTTCAGTTGACTCGGATGACGTGAGCACGCACTGCAAAATCCC
ACCATACTCGTTCCCGACATTGGTGCACCAGGTGGCATTATCTTTGTCAT
AACCGGCAAGTTTGCGCGTGATCTTTTTTGTTGAGTCGATCTTTAGTATC
TTCCCAAAAACAGATGTGATGGATCCTTTGAGGATGTCTGAACGGTACAT
GACATCGTGAGCGTAAGTTGACAAGAACCATTTGGCAGTTGGTATTGCTT
TTCTTGCAGGGCATTCCTCAAAGTTCTTGTCGACTTGTCCGAAAATGGCA
TCTTTTTTCGAGTAGCGCTTGCAATCCTGAAAGTACTGTGCCGCATTTCT
CAAAAAGCGCTCGCTGTGTGTCTCATCGATCGTCTTTTGAATGGCGGTTG
AGCTGTTTCCAAGGGAACGAGAGCGCAACATGGTCATCAAAGACTTGTCC
AGCCCATACTTGTATGTCAGCGTGGCCGGGAACGTTTCCTTTGTTGCAAA
CGGCATAGACTCTAAAAGTCGGTGATCCCAAGCTGGACACTCAGCACCAC
AGGAACATGACAAGTACTCTGTTGCGATGTAGTAGAAGGTGGACAAGTCT
AGAACAGTGCGCACCGTATGATAGACACCTTTACGAAACATCTTTCTCTT
GCAGTTGGGATACTTCACACATGTAAATTGCCAATTCCACATCTTGACGG
GCATCCACAGGAACAAGTTTCGTCTGAAGTACCCTGACAGAATTGGTTTC
TTCGATCCGTACGTCTTGGTGGAAGGAAAATACCAGTTCCTAAGGTCGTC
CTTGAACTTGCATTCGTTGTTCCTTGGATGTTTGCTTACAAAAAGACACT
GGCCGATCCAAGCTTGGTCGATGTCTCCGATGGTTTTTTTCCAGCCATTG
GGAAGTCTGGAAGTATAGTCATTTTCTTGACGAAATTTTCCAGGACTTGG
CGGGCAACTTGGTGGAGGTGGACTGACAGATCTCGACACCAAGCTCTCAC
GGGCAGAACTTAGTGAAGCACGGACATCTGGCGAAGATGGAGGGGATTCG
TATACGTCACGATCCACTGTCGTTGGTGGTGCGTTTTCCGACACGGCAAC
CATTGTCGTTGGTGGTGCGTCATTTTGTGGCAGAGCGACCATTGCCTGTG
GTACGTCATTGTTGGGCGG Run BLAST on NCBI protein sequence of TCONS_00045081-protein >TCONS_00045081-protein ID=TCONS_00045081-protein|Name=TCONS_00045081-protein|organism=Clytia hemisphaerica|type=polypeptide|length=439bp
PPNNDVPQAMVALPQNDAPPTTMVAVSENAPPTTVDRDVYESPPSSPDVR
ASLSSARESLVSRSVSPPPPSCPPSPGKFRQENDYTSRLPNGWKKTIGDI
DQAWIGQCLFVSKHPRNNECKFKDDLRNWYFPSTKTYGSKKPILSGYFRR
NLFLWMPVKMWNWQFTCVKYPNCKRKMFRKGVYHTVRTVLDLSTFYYIAT
EYLSCSCGAECPAWDHRLLESMPFATKETFPATLTYKYGLDKSLMTMLRS
RSLGNSSTAIQKTIDETHSERFLRNAAQYFQDCKRYSKKDAIFGQVDKNF
EECPARKAIPTAKWFLSTYAHDVMYRSDILKGSITSVFGKILKIDSTKKI
TRKLAGYDKDNATWCTNVGNEYGGILQCVLTSSESTEMLATMAEGIMSRY
ESANVEPPKVLYTDRDCCNMNGNSKMKELFHKWLYILIR Run BLAST on NCBI transcript from alignment at sc0006858:37..1355 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045081 ID=TCONS_00045081|Name=TCONS_00045081|organism=Clytia hemisphaerica|type=transcript|length=1319bp|location=Sequence derived from alignment at sc0006858:37..1355 (Clytia hemisphaerica)
CCGCCCAACAATGACGTACCACAGGCAATGGTCGCTCTGCCACAAAATGA
CGCACCACCAACGACAATGGTTGCCGTGTCGGAAAACGCACCACCAACGA
CAGTGGATCGTGACGTATACGAATCCCCTCCATCTTCGCCAGATGTCCGT
GCTTCACTAAGTTCTGCCCGTGAGAGCTTGGTGTCGAGATCTGTCAGTCC
ACCTCCACCAAGTTGCCCGCCAAGTCCTGGAAAATTTCGTCAAGAAAATG
ACTATACTTCCAGACTTCCCAATGGCTGGAAAAAAACCATCGGAGACATC
GACCAAGCTTGGATCGGCCAGTGTCTTTTTGTAAGCAAACATCCAAGGAA
CAACGAATGCAAGTTCAAGGACGACCTTAGGAACTGGTATTTTCCTTCCA
CCAAGACGTACGGATCGAAGAAACCAATTCTGTCAGGGTACTTCAGACGA
AACTTGTTCCTGTGGATGCCCGTCAAGATGTGGAATTGGCAATTTACATG
TGTGAAGTATCCCAACTGCAAGAGAAAGATGTTTCGTAAAGGTGTCTATC
ATACGGTGCGCACTGTTCTAGACTTGTCCACCTTCTACTACATCGCAACA
GAGTACTTGTCATGTTCCTGTGGTGCTGAGTGTCCAGCTTGGGATCACCG
ACTTTTAGAGTCTATGCCGTTTGCAACAAAGGAAACGTTCCCGGCCACGC
TGACATACAAGTATGGGCTGGACAAGTCTTTGATGACCATGTTGCGCTCT
CGTTCCCTTGGAAACAGCTCAACCGCCATTCAAAAGACGATCGATGAGAC
ACACAGCGAGCGCTTTTTGAGAAATGCGGCACAGTACTTTCAGGATTGCA
AGCGCTACTCGAAAAAAGATGCCATTTTCGGACAAGTCGACAAGAACTTT
GAGGAATGCCCTGCAAGAAAAGCAATACCAACTGCCAAATGGTTCTTGTC
AACTTACGCTCACGATGTCATGTACCGTTCAGACATCCTCAAAGGATCCA
TCACATCTGTTTTTGGGAAGATACTAAAGATCGACTCAACAAAAAAGATC
ACGCGCAAACTTGCCGGTTATGACAAAGATAATGCCACCTGGTGCACCAA
TGTCGGGAACGAGTATGGTGGGATTTTGCAGTGCGTGCTCACGTCATCCG
AGTCAACTGAAATGCTTGCAACCATGGCTGAGGGAATCATGTCTCGATAT
GAAAGTGCTAATGTTGAACCTCCAAAAGTATTGTATACAGATCGAGATTG
TTGCAACATGAATGGAAATTCCAAAATGAAAGAATTGTTCCACAAGTGGC
TCTACATCCTCATTCGGTT Coding sequence (CDS) from alignment at sc0006858:37..1355 >TCONS_00045081 ID=TCONS_00045081|Name=TCONS_00045081|organism=Clytia hemisphaerica|type=CDS|length=1317bp|location=Sequence derived from alignment at sc0006858:37..1355 (Clytia hemisphaerica)
CCGCCCAACAATGACGTACCACAGGCAATGGTCGCTCTGCCACAAAATGA
CGCACCACCAACGACAATGGTTGCCGTGTCGGAAAACGCACCACCAACGA
CAGTGGATCGTGACGTATACGAATCCCCTCCATCTTCGCCAGATGTCCGT
GCTTCACTAAGTTCTGCCCGTGAGAGCTTGGTGTCGAGATCTGTCAGTCC
ACCTCCACCAAGTTGCCCGCCAAGTCCTGGAAAATTTCGTCAAGAAAATG
ACTATACTTCCAGACTTCCCAATGGCTGGAAAAAAACCATCGGAGACATC
GACCAAGCTTGGATCGGCCAGTGTCTTTTTGTAAGCAAACATCCAAGGAA
CAACGAATGCAAGTTCAAGGACGACCTTAGGAACTGGTATTTTCCTTCCA
CCAAGACGTACGGATCGAAGAAACCAATTCTGTCAGGGTACTTCAGACGA
AACTTGTTCCTGTGGATGCCCGTCAAGATGTGGAATTGGCAATTTACATG
TGTGAAGTATCCCAACTGCAAGAGAAAGATGTTTCGTAAAGGTGTCTATC
ATACGGTGCGCACTGTTCTAGACTTGTCCACCTTCTACTACATCGCAACA
GAGTACTTGTCATGTTCCTGTGGTGCTGAGTGTCCAGCTTGGGATCACCG
ACTTTTAGAGTCTATGCCGTTTGCAACAAAGGAAACGTTCCCGGCCACGC
TGACATACAAGTATGGGCTGGACAAGTCTTTGATGACCATGTTGCGCTCT
CGTTCCCTTGGAAACAGCTCAACCGCCATTCAAAAGACGATCGATGAGAC
ACACAGCGAGCGCTTTTTGAGAAATGCGGCACAGTACTTTCAGGATTGCA
AGCGCTACTCGAAAAAAGATGCCATTTTCGGACAAGTCGACAAGAACTTT
GAGGAATGCCCTGCAAGAAAAGCAATACCAACTGCCAAATGGTTCTTGTC
AACTTACGCTCACGATGTCATGTACCGTTCAGACATCCTCAAAGGATCCA
TCACATCTGTTTTTGGGAAGATACTAAAGATCGACTCAACAAAAAAGATC
ACGCGCAAACTTGCCGGTTATGACAAAGATAATGCCACCTGGTGCACCAA
TGTCGGGAACGAGTATGGTGGGATTTTGCAGTGCGTGCTCACGTCATCCG
AGTCAACTGAAATGCTTGCAACCATGGCTGAGGGAATCATGTCTCGATAT
GAAAGTGCTAATGTTGAACCTCCAAAAGTATTGTATACAGATCGAGATTG
TTGCAACATGAATGGAAATTCCAAAATGAAAGAATTGTTCCACAAGTGGC
TCTACATCCTCATTCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045081-exon-sc0006858-1491911889:37..1355 | TCONS_00045081-exon-sc0006858-1491911889:37..1355 | Clytia hemisphaerica | exon |
| TCONS_00045081-exon-sc0006858-1510915933:37..1355 | TCONS_00045081-exon-sc0006858-1510915933:37..1355 | Clytia hemisphaerica | exon |
| TCONS_00045081-exon-sc0006858-1575043694:37..1355 | TCONS_00045081-exon-sc0006858-1575043694:37..1355 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006858 | supercontig | sc0006858:37..1355 . |
Blast
The following BLAST results are available for this feature:
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