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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045106 ID=TCONS_00045106|Name=TCONS_00045106|organism=Clytia hemisphaerica|type=transcript|length=944bp
CTTGGTGTGAgaaaattcctttcaatttcgaaatttttcgtCTAAAGGCT
CTAAAGGTCACCTTTAAGTTTAACAAATTCTTTCTTgacatttttgataa
aaatcgtCATCAGCTATATATGTGTAAGAAAATCTTGAAGAATTGATCTT
TCCCAACGAAAAATCTATTAAATAAATGTTTAGCTAAGCTGATCAAACAT
CGGGCATGTGaatagcttgctagactaacaTGTGGGGGGTTTTCGCTACG
GACGGTTgacgaaaacaattttttacctAGTAATAGAATTAATACAGACA
TTAAATTTGAACATGCGGGCATGACAAAACTTTTgtcctttatatttttt
acgtTATGGCATCATGATAATACGTGGGTTGTGATTAATTTTCTCCCCTC
TTTTTAAACTGATGTACGAAAATGTTTACACAAAATGCATGACATTTCGT
AACTATACATCCCTCAATTGTCATTTACTCATCATCGCTCCTCCAATTAC
TAATCCCTCAACGTCTCATAACTTGGATATTTTTTGCGTTGTTGTACCTA
TCATCATAACACCACCACACAAATAAATCAGTGTCAACGTGTACGGAATG
TAGATTAATTTACATAAGTTAACTCTGCCCTCGTTATAAAAGCAcacgtt
cgatttgcgtaaaaTCTAcgttcgaacgtttgcttccataatggcggggA
TTACGTAACCAAACATGAACCGCATGAAAAACTCTGGGGTTTATAAATGG
TTTATATCTTCATTGTATTCTTAGAATTCTTCCTACCTATTACACAGTCT
GGACTCAGGTCATTGTCGTGAAATGGTCGAAAACTACGTCGCCGAAAAAG
CACCCAGTGATCAAATAAGTCGCCTTGAAGTAATCTCCTCTTTTTCGGTC
CAAGCTTGTTGTCATGTTGAATAaaagagatattcaacttttta Run BLAST on NCBI transcript from alignment at sc0006936:5..948 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045106 ID=TCONS_00045106|Name=TCONS_00045106|organism=Clytia hemisphaerica|type=transcript|length=944bp|location=Sequence derived from alignment at sc0006936:5..948 (Clytia hemisphaerica)
taaaaagttgaatatctctttTATTCAACATGACAACAAGCTTGGACCGA
AAAAGAGGAGATTACTTCAAGGCGACTTATTTGATCACTGGGTGCTTTTT
CGGCGACGTAGTTTTCGACCATTTCACGACAATGACCTGAGTCCAGACTG
TGTAATAGGTAGGAAGAATTCTAAGAATACAATGAAGATATAAACCATTT
ATAAACCCCAGAGTTTTTCATGCGGTTCATGTTTGGTTACGTAATccccg
ccattatggaagcaaacgttcgaacgTAGAttttacgcaaatcgaacgtg
TGCTTTTATAACGAGGGCAGAGTTAACTTATGTAAATTAATCTACATTCC
GTACACGTTGACACTGATTTATTTGTGTGGTGGTGTTATGATGATAGGTA
CAACAACGCAAAAAATATCCAAGTTATGAGACGTTGAGGGATTAGTAATT
GGAGGAGCGATGATGAGTAAATGACAATTGAGGGATGTATAGTTACGAAA
TGTCATGCATTTTGTGTAAACATTTTCGTACATCAGTTTAAAAAGAGGGG
AGAAAATTAATCACAACCCACGTATTATCATGATGCCATAacgtaaaaaa
tataaaggacAAAAGTTTTGTCATGCCCGCATGTTCAAATTTAATGTCTG
TATTAATTCTATTACTaggtaaaaaattgttttcgtcAACCGTCCGTAGC
GAAAACCCCCCACAtgttagtctagcaagctattCACATGCCCGATGTTT
GATCAGCTTAGCTAAACATTTATTTAATAGATTTTTCGTTGGGAAAGATC
AATTCTTCAAGATTTTCTTACACATATATAGCTGATGacgatttttatca
aaaatgtcAAGAAAGAATTTGTTAAACTTAAAGGTGACCTTTAGAGCCTT
TAGacgaaaaatttcgaaattgaaaggaattttcTCACACCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045106-exon-sc0006936-1491911889:5..948 | TCONS_00045106-exon-sc0006936-1491911889:5..948 | Clytia hemisphaerica | exon |
| TCONS_00045106-exon-sc0006936-1510915933:5..948 | TCONS_00045106-exon-sc0006936-1510915933:5..948 | Clytia hemisphaerica | exon |
| TCONS_00045106-exon-sc0006936-1575043694:5..948 | TCONS_00045106-exon-sc0006936-1575043694:5..948 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006936 | supercontig | sc0006936:5..948 . |
Blast
The following BLAST results are available for this feature:
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