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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045108 ID=TCONS_00045108|Name=TCONS_00045108|organism=Clytia hemisphaerica|type=transcript|length=1299bp
gcgagttacctgcaccaagcgttaaaccagcagcaaaaatatcataaact
agactgtgaaaaaagtttaacgcttggattcccaggctaatcATATTGCT
GTGTCAATTTAAGACNttaaaccagcagcaaaaatatcataaactagact
gtgaaaaaagtttaacgcttggattcccaggctaatcATATTGCTGTGTC
AATTTAAGacggccttaagtccattttttccattttgagataatcgactt
taaaggttgagatgtgttggacttaaggctacacatttcatgtcaatatt
ttagaaaatgaatAGAATTAGAAACTATAGTTAGCCCTAAGAtttaggac
ttaaggctgtttatgattgatatattatggaacattctaaattcttattt
tttttgaattgcaaaaaTACACCTCTTTCCCATTAGAATTCTGTGGATTT
AAGGCCGTTTTTGAAAAGCGTGCATGCTGAAATAGGGGGTTATGGTCGAC
AAAATGGACTTAAGTCGATATACTAATAAGAAATTAATGACATCTGAAAT
TATTTTCCACTAAAAACTTCTCTAGCAAAAGATATAGCTCATTTTTGTTT
ACAGAAaatctaatctttttaaaacaacgCATTTTATGTTAGGGGAATAG
GTTGAGCCATCTGTTTGATGTGAAAGTGTTTATAAAGTATAATTGGAAAA
GCTCTTGCTTTTAGTTGATAAAGAACtcttaaacttttttaaacttttac
aaCTTAACTTTTTTAATGTGTAGCCAAAACTTTTTATATCCACATATGGG
TTAGCCAAGAGAAGGATATCatttaagccatttttgagTGGAGTAAAACT
ATGtttgaacttttgaaaacaaccaagtgaaaataatttcagagtccatt
gaaaaaattgaatttttcattggAATAAGCAGAAAACCTCTTTTTtagcg
gctagttcgaaacgcaggtcacctCATTTTGTGATAACGCCATTATTTCC
ATAATTTAGgtgtcactttgtcaatattaggggttgatgatttgtccTTG
AAATCTTAATAGCATATTTTGTTTGTATACAACATGTCCATTATgcatat
aatatttaaaaaaacatgttatgAATGGCATGTTACGAGTGCAGTACAGT
TTTCTGGACTGTAGTTTAtatgacctgtaacctgtgacctgcgtttcaaA
CTAGCCGCTTCTATAATCCATGTCAAACTGAATCTTACCCGAAATGATTT
TGCATTATTTCTCGTTTACAAATTATCAAGCTTTTAAGTCGCACAAAAT Run BLAST on NCBI transcript from alignment at sc0006938:1..1299 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045108 ID=TCONS_00045108|Name=TCONS_00045108|organism=Clytia hemisphaerica|type=transcript|length=1299bp|location=Sequence derived from alignment at sc0006938:1..1299 (Clytia hemisphaerica)
ATTTTGTGCGACTTAAAAGCTTGATAATTTGTAAACGAGAAATAATGCAA
AATCATTTCGGGTAAGATTCAGTTTGACATGGATTATAGAAGCGGCTAGT
ttgaaacgcaggtcacaggttacaggtcataTAAACTACAGTCCAGAAAA
CTGTACTGCACTCGTAACATGCCATTcataacatgtttttttaaatatta
tatgcATAATGGACATGTTGTATACAAACAAAATATGCTATTAAGATTTC
AAggacaaatcatcaacccctaatattgacaaagtgacacCTAAATTATG
GAAATAATGGCGTTATCACAAAATGaggtgacctgcgtttcgaactagcc
gctaAAAAAGAGGTTTTCTGCTTATTccaatgaaaaattcaattttttca
atggactctgaaattattttcacttggttgttttcaaaagttcaaaCATA
GTTTTACTCCActcaaaaatggcttaaatGATATCCTTCTCTTGGCTAAC
CCATATGTGGATATAAAAAGTTTTGGCTACACATTAAAAAAGTTAAGttg
taaaagtttaaaaaagtttaagaGTTCTTTATCAACTAAAAGCAAGAGCT
TTTCCAATTATACTTTATAAACACTTTCACATCAAACAGATGGCTCAACC
TATTCCCCTAACATAAAATGcgttgttttaaaaagattagattTTCTGTA
AACAAAAATGAGCTATATCTTTTGCTAGAGAAGTTTTTAGTGGAAAATAA
TTTCAGATGTCATTAATTTCTTATTAGTATATCGACTTAAGTCCATTTTG
TCGACCATAACCCCCTATTTCAGCATGCACGCTTTTCAAAAACGGCCTTA
AATCCACAGAATTCTAATGGGAAAGAGGTGTAtttttgcaattcaaaaaa
aataagaatttagaatgttccataatatatcaatcataaacagccttaag
tcctaaaTCTTAGGGCTAACTATAGTTTCTAATTCTattcattttctaaa
atattgacatgaaatgtgtagccttaagtccaacacatctcaacctttaa
agtcgattatctcaaaatggaaaaaatggacttaaggccgtCTTAAATTG
ACACAGCAATATgattagcctgggaatccaagcgttaaacttttttcaca
gtctagtttatgatatttttgctgctggtttaaNGTCTTAAATTGACACA
GCAATATgattagcctgggaatccaagcgttaaacttttttcacagtcta
gtttatgatatttttgctgctggtttaacgcttggtgcaggtaactcgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045108-exon-sc0006938-1491911889:1..1299 | TCONS_00045108-exon-sc0006938-1491911889:1..1299 | Clytia hemisphaerica | exon |
| TCONS_00045108-exon-sc0006938-1510915933:1..1299 | TCONS_00045108-exon-sc0006938-1510915933:1..1299 | Clytia hemisphaerica | exon |
| TCONS_00045108-exon-sc0006938-1575043694:1..1299 | TCONS_00045108-exon-sc0006938-1575043694:1..1299 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006938 | supercontig | sc0006938:1..1299 . |
Blast
The following BLAST results are available for this feature:
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