TCONS_00045714 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045714
Unique NameTCONS_00045714
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2728

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045714 ID=TCONS_00045714|Name=TCONS_00045714|organism=Clytia hemisphaerica|type=transcript|length=2728bp
TGAGGTCGGTAAATGAGAAATTTATTATGCATGCTTCAGTGACTTTGCTA
TAACGGACATTTACCATCTAGGACggtaactttgaaaaaaatacggCACG
gatgaaacaaaaagaaatccCTTAGGGATTGATATCTGGATCGCAGCTAG
AATaaAAATAGCAGTTTATACATCGATCGAACCATCAAGCATCAAAGAAA
GGCACTCTGCAAGCAACACGAACAAGGCTGCATCTGGCAAGGCTCCATTG
CAGATTACAAAGATCAGCACCGCAAAGAGTGTGCATTCAGAAACGTCAGA
TGTCGTCTGTGTAATCAAAAAGTCGCCCGTCATGAAAAGGAGGGACACAA
GTTGACGTGTACACATCGTTTGGTTAATTGCACAACATGTGGTGCCCAGT
ACAGCTTCATCAACAAAAAGAAACACGAAGATGAAGAGTGCAAGGTGCAA
TGCGATTATTGGCGATATGGTTGCAATGAAAAGGTATACAAACCACACAT
GGAACGTCACCTTGCCAATTCAGCAAGACGTCATATCGAACTTGTTAAAA
CTCATTATGACAGAATTGTAACAGAACTTAACACGACAGTCAGCTTGCAG
AGTGAACACATTACAGATTTAACAACGCAACTCGAAAGAACTAAATTACC
CATGGCAACCAGTTCAAGCTCACCAACGGTGAAACAGACAGTTGAACCGA
AAACTCTCCCCAGACCTCCAATTCGAATTTACGAAAAGAAAGAGGACAAG
CAACAACAACAAGCAACAAATCCCTTTCGACCGGTTTCAGCCAAATGGGA
CGGACAGAAAATGTACAACATAGTGTTTCAGGGTAAAACGCTGACATTTG
ATGatgtttacaaaattttggacgaaaagaaattcgcgaaattcgaagaa
attttCCAACAAAATCCGAACATCGTCAACTCGTTGCGTGATGGTTATGG
TTTCACACTTCTCATGGAGGCTGTTTGTAAAGATCGTTTCGACGTTTTCG
TTCACTTGATGAAATATCCTCAAGATTTTTCACTCGTGGGCAATAATGGT
TGGAACGTTCTTCATTGGGTTGGTCGTTATGGAACAGTTCGTCATTTGGA
AAAGTTTGAtcaacaaacaatcaaaatgttgATCGATGGAAGAGACAAAT
GGAACAAAACACCATTGCATTTTGCAGCATGTTGGAACaaacatgacgtc
atcagatggtTGTTGGCCAAAGGAGCGAATCCTGAATTGAAAGATGAAGA
TGGTCAACGCCCTGATGAACAACTCATGTCTGGTTGTGATGGTGTTACCA
AAGAAATCTTTCGATCGTTTCGTTCGTCTTGATCGATGTTTTGATGGGTT
GATCACACAAACATTTCCTTTCCTTCGAAAATTTCCACAAATCACTTCTC
TCCACCAACTCGAAAAGgtCTATCGTTCGTTGTTGCTTTCCAAAGTCCGA
AATCCGTTTCACGTCCCTCGCCGTTAGTGGTGCTCGCATTTTGTACACGA
CCTCCTTCTCGTTTCTCGTACACGACGTTATTCGTTCCTCGTACACGATA
TTATTCGTTTTTCGTACACGACGTTATTCGTTTTTCGTGGACAACATGCT
TCCTTGTCGTTTGTGACGATACTTAATTCGCAGACACTGTCGTTATTTGT
CTTCGTTGCTCGTTACCCTTGGAGTCTTTTTCAACAGTAGCAGTTTAACT
TGCTTGTCCATTGATTGGAGTAAAGACCAGTTTGGAGTTTCATTTAGTGT
AATGGTTTTCAGATTCAGTTGTCATTCGTGGTTATCACAGTATCATGTTT
TCACATACAATGCATTTTGAAACAGTGGACTTTCTTCACAGTGATCCTGG
CAAAAAGTAAACCGTTTACTGGAATCACGCGATGCGTGTCGTTTATTCCG
GCTAAGTAGAACTTTCAATAGATACCTTAACCaaggaaactaattttggc
gagaaataaattttgagaattttgctAGTTTTGCCTAATGTGTTTCCAGA
TATAATTGACAGttgaaacaagaatgcctgtaacttttgatataatttcg
aaactttttctgtttgttttagagaatcaaaagtgctatatttgaatgta
tttttggttgaaaaattcgtgatttttagcggttaaatttgtgattgaaa
aaattgagctttttatcTACTTaagctataacgttcatttttacaccagt
ggtagttcaaccttaggttaagaaggttgtcaaatttAAAGGCAAATGGA
AAAGTCCTTAGGAAGAtaatgggacccgaaataccccttgctaGCACTTT
TTTTCTGTGAAAcatcaaatctccaaatttttaattttacttctcgccaa
aatttctcaTTGATTCAGAACTTAATTTGTTGGGCATTTCggaattgaaa
aagatttaaaaagtcagcatttattttggattttgatgaaCCTGCAATCA
GCTGGACAAGGACCTGAAATAATTCTGGCATCAAGTGATTTAcgaaaatt
ttatatttattttcacgaagaaaaaacaagagttcataaaaacgaaaaaa
tacatttttttatttttagaaaaaatttgaatattattattaCAGAATAT
AAATTTTACATGTATAAATAGAGTAACTTTGTATTTATTGCAGTTTCAAC
CTAAGAAATATTCAAGAAGTCCGATTGAACTTTTAGCGATCCATGCTAAC
TTTGGGAACGAATTTGTCTGGGTATGTG
Run BLAST on NCBI

transcript from alignment at scaffold_100:31396..43510-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045714 ID=TCONS_00045714|Name=TCONS_00045714|organism=Clytia hemisphaerica|type=transcript|length=12115bp|location=Sequence derived from alignment at scaffold_100:31396..43510- (Clytia hemisphaerica)
TGAGGTCGGTAAATGAGAAATTTATTATGCATGCTTCAGTGACTTTGCTA
TAACGGACATTTACCATCTAGGACGGTAACTTTGAAAAAAATACGGCACG
GATGAAACAAAAAGAAATCCCTTAGGGATTGATATCTGGATCGCAGCTAG
AATGTATGCATTCTATTCTTTTCATATCAATTTTTCCATTAGAATAGGAA
ATTATAATAGGATAATTTATAATAAGATAATATCAGTGAAATGAGTTTCC
TTCTTTATAAACGTTACTTTAATCGATATAAAAATCTGTGTGTTATGCTC
AATTTTAAAATAAAACTTCGTTGTTTTTTCTTTAAATTAACTTTTGGAAT
GGCAAAATTTCAAAGAAACTGTGTGTTATGTGAGAGATCACACTCTTTCA
ATGAATCTTTTCTCCGTTTCTTAACCGTGATTCATTCGGGATCCTGGATG
ATTGCCATGGTCACTTTTGGTGCATCGGTGAGTGCGTTGAATGAAATCGG
AATTTGTCCTCGCAGCATAATAATGCTAACCCTTGTAAAGTATCTGCAAA
CAAAAAACGTAAATTTTATTTTGTTAAAGAAAAATAGCAGTTTATACATC
GATCGAACCATCAAGCATCAAAGAAAGGCACTCTGCAAGCAACACGAACA
AGGCTGCATCTGGCAAGGCTCCATTGCAGATTACAAAGATCAGGTTTGGA
CTTCATATTTCCTAATTGGTTGCGATTTAAAGAAAATTCTATCTACATAA
AGTATGTGATTGTTAATGACAAAAATTCGAGTTCGCTATGGTATGTTTAA
AAATGTGTTAAAAATCTTTCTCAATAAATACCGTCATCATCACAATAGCC
AGCATTGTCAATACTTGTTCGTGTAATACGTTACTCCGTCGGGAGTGTTT
ATCAGATTGCTGGGATAATAATAGCCATATCACGTAAAAAATCACAATTT
TCCACTTTCTTAATACTCAATTTTTTGACTTTAAAAGCTCAAAATAAACT
ATAGAGAAAACGAGAAAGCTGATTTAATGAAAAAGTAATACCTTAAGTTT
TGAGTTAAAATAATGTGATTTCTAAACGTCCGAACAATTGAAGTCATTTA
TTCACCAAAGTTTTTCCAGAGCCACCAGTAGAATAATAACTAATGATAAA
GGAGTTAGACATATGTAATTTGTACATAGCACCGCAAAGAGTGTGCATTC
AGAAACGTCAGATGTCGTCTGTGTAATCAAAAAGTCGCCCGTCATGAAAA
GGAGGGACACAAGTTGACGTGTACACATCGTTTGGTTAATTGCACAACAT
GTGGTGCCCAGTACAGCTTCATCAACAAAAAGGTATAACTTTTGTTTTTT
CAACTTTATTTTTTCAAGAGAAATACCCCTGATTTAGTGGCCTTATAAAT
CCTCTAGCAAATGTGGATGAAACAATTGAAAAAATTTGAATTAAGCTAAA
GAGTTTATCAAATTCAATAACATTAGGATAGGATTCCACATAGTCTGTAA
GCAAGGATGGATCAGAAATCAATTTCCAAGGGGGATTTAAATATCATTCT
CTCTGTGGGTAGGACGTTTTTGTCCATGGCTTTATCATAAGAGGTGTTTT
TACCATCCTTTCTCAATCAATCTTCTTTTTTCACCTTAGAAACACGAAGA
TGAAGAGTGCAAGGTGCAATGCGATTATTGGCGATATGGTTGCAATGAAA
AGGTGAGTTCTCTAGTTTTCTGTCTGGGTTGCAATAAATGGGAGATTTGG
AAAAGTCTTTAAAATTCGATGAACGGGGTCTTTATTGCCAATGGGTTTGA
ATTTGTCTATAAACTTGAAATTAAGGTAATTGTAGACTAATACGACGGCT
TTTTAGAGAACAATGAGGAACTCTAAAAATACTCCTAAAAATCAATAAAC
CGTGGGAGAGAGGGTCCTACGAAGGTCCGGCGGTATTGAGAGAATCGAGA
ATGGGGGATAAAGCGTTTTTACGCACCTAAGATCACTTTAGTGCTCGGCT
CCCGAATATTAACCGAACTTCCAGTTCTTGAAGAATTGGCCGCTGTGACA
TTCTGAATTTGTTTACTTCGTTGTTTTATTTTTTTATTTCGTACTCCAGG
TATACAAACCACACATGGAACGTCACCTTGCCAATTCAGCAAGACGTCAT
ATCGAACTTGTTAAAACTCATTATGACAGAATTGTAACAGAACTTAACAC
GACAGTCAGCTTGCAGAGTGAACACATTACAGATTTAACAACGCAACTCG
AAAGAACTAAATTACCCATGGCAACCAGTTCAAGGTATTTATTCAAAGCT
GTGTGTTGGCTTTTGATTAGTTTTATCTTGTTTTTTAAAACTTTTCCTAC
AGCTCGGAAAGTCTCCCTTCTTACTAAGTGGTGACCAAGTATAGCAAATC
AAAATTTTATTATCTGAGTACTTTTATATCGCACACTAGCATACTAAAAT
CCTAGAAAAAATACAAAATTGTTCAAAGTGCTCTTAAGCCCATGAAATGT
AATACCTTTTTTCAACTCTTTTAATTTCATTTATTGCGGCTAGCCTAAAA
CAGGGCACCTTCCTAGTGCTCCAGGTCACGAAAGACCGCATATGGTCAAT
GACCAAAGAAAGAAAGTAATCTTGCATGGTGTTAGTGACAGTTAAATAAT
CTGGGGATAGGCTGGGATAGTTTTTTTGTCGAATTTCAAGAAAGTTTGAG
GCTTCCGAAAATAGGGTGTAAAGACTATTATACATATTATTTTGACCCAT
AAGATCAGAATAAGATTTTATTGATCCAATTGAACTGGATTGTGTTAGTG
ACAATTAATTCATTGCAAGTATATCTTTTATTATGTCAGCCCTACTTTTT
CATTTACTAGCTCACCAACGGTGAAACAGACAGTTGAACCGAAAACTCTC
CCCAGACCTCCAATTCGAATTTACGAAAAGAAAGAGGACAAGCAACAACA
ACAAGCAACAAATCCCTTTCGACCGGTTTCGTGAGTATTTAGCTCTTTTA
AAGCTTTGGAGACCATCATTGTTCATTTAAGAGCCCCCTTATTGGCAGGA
AGACGAAATTCTCTCCCCTTACGAAATTCAGGAGATATTTTTTCATTGAT
TTGAAATTTCAGATTTTAACTATATTTGAAGGAAGCACCCCTCCTCTTAA
ATGCCAGCCCTCTTTTAGGAAATTGGGAACCAAAAGACCCCCTTACAAAA
ATTCTCATATCCCTCCCTCCTCAGGTTAGGGGGTAGACATATAGTTTATG
ATTATGAGGGGCAGTAGTGTAGTGGTTATCAATCTTGAGTACTGGAGAAA
TGCCACAACATAGAACGATTGAATGAAAAATATAAAATTAAATTTGCGTT
TTCCAATTACTGTTACAAAGTTGAGCAGTAAAACTGCTCATTTACATTCG
TATAACGTGTTTCGTTAGTTTTTATTATTATCCTATATCAAAACTTATCA
GAGGGGATGTGTGCAGCCTACTCCTATCTTGTACGTCAATCAGTGAGGCC
CCCCCAGCGGACCCAAATTTCACGCATTCACGCAAAATTTTTTCGCAATT
CACGCATTCACGCGAGTTTTTCTCGAAATTCACGCAAACCCAATTTTTTG
GGAAATCGGGGAAATTTTCGGAAAAAATCGGGGAAAATGTCAAAAATAGA
GGTCTTGCACATTTCGCGCTAAGTTACGTAATTTACGTAATTTCTGCCAT
TATGGAGTAAAACGTTCCATTTGCATAAAAAAGTATGACAAGGCTGTACT
CGAGATATTATTCGACCGGATCTGTTCATGTACTTGAGAAAAACTTAACT
CAGTAGTGATTTTTTCCTGTAGACCTGACTATAAAACACCGTGTTTGGTA
GCGTCATAAGAAGCCCCCAAATAGANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTCTAACGATCGAACGTCACGATCGATTGGAAAAGGTGAAGCTTCTG
CAGTTAACGTATCGCGATAGTAAGTGAAAAGATATGCGCCGCAGGGGAAT
TTTTGTACAAAAATTAGCTTAAACATTATCCAAAATAGGTCAAACAAACT
CGAGTATGAAACCATGATGCTTAGCTCAAGGGTAAGGAGGCGCAACCATG
GTTTACGCAGAGAGGAAATTTTTGCATTTCTGTCACTCGCGTTTGGCTAA
AAATGCTCTCTTTAACACCATTGAAAAAGAATGTAGTCTAAATTCGTTAG
AGGCAAGGTACGATCACTTGAAATCTTGTAAAATGAAGTAAAAGAATGAA
CATTTGTTGCGAGCGAAGCGATCAAAAAAAATTAAAAAGAAAGGTTTTAA
TCAGGGCTCGCCAATTAATTTCCTAACATGGAGGGGCCGAAAACATAGTG
ACTAAGGAGGCGCAACCATGTTTTGCGCCGACAGGAGAAAATTTTTATTT
TAACCCTCTGATGTGCTTGAATGCAACTCCATTTCAGACTAATTTTGCCA
AGAAATCAGGTTATCGAAAGTCTACATCATGGGTAAAAATTTCTTTGAAA
TAAGATTCTTTTTATTTGCAAAAACGAAGTCATGGCTGCCTCCTGCCCCA
AGTGGCTCTGGCCCTTGCTGGCCCTGGCCGTGGCTGGCCCTGGATCACTC
ATCATGCATAACCATAGTTTTATCCGCCTGTTTTATCTTAAACAAACACT
TTCAAGGGGGCAAATTAGAGTTATTTAAGATTCGAGGGCCAATACATGTT
TGGCTCGAGCGAAAAATTCTTGAAATTTAAGGTGTCTAGATTGGTAGAAA
GCGCATCTAAATCATGAATCGTTTTATAAAATAGAGAATTTGAAAGTTGT
TGATTTTTTTGTGCACCTTCACCTGGCATCCCTTGAATTTGGGATAGGTG
CGCACCTTGGGGTTTTCTACAAACTGTGAAAAGGAAAAATTCACGCGTTC
ACGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAGTTTTTTCAATTCACGCATTCACGCAAT
TTTTTTTCGATTTTCACGCATTCACGCAACCAAAAAAGCCCATTCACGCA
TTCACGCAAACCGCTGGGGGGCCCCATCAGTTCACTAAGATGACTTATTT
TCATAAAATAATGCTGAATAATACCCAAAATTGCCGATATTGTTCGAATG
TAAATTTCAGAAATTTTCCCGAAAGAAATTCTTTCTTTGTGCCACAAAAT
GAAACAGTAAACGAAAATACTTCCGCTTATTTTTGAAAACTTCATTGTTT
AATTTAGAGCCAAATGGGACGGACAGAAAATGTACAACATAGTGTTTCAG
GGTAAAACGCTGACATTTGATGGTAAGTTGAATTTTAACACTGTATTTGT
GAAACGGTCAATTTTGCCATTGCGGATATTAATAATTTTAAGCCTGGGGT
TAATGAATGAACCGGGTCTAATTCATTCGGAATTTTCCACCGTGGTCATT
AAATTATGTTATGTCAATTTAGCCTCTTCTGCAGGGAACAGCCAAGTTAA
GAAATGCCTTCCTCAATTTTTATACCCATTCTCAACATTACCTATTTCAA
AGTGAGATTTTGATGGGACCTCAAAATCAAATCCGGTGAAATCTTTACTA
TTTTCATAGTCATCTTGGTGGGTAATGAAACACCACCGGGAGGGGTCGTC
AGAAAATATTCATTTGAAGTTGAAATTGACATTATTTGCATTGAGTTGTC
AATTTCATTCTCGAGAGAGTAATCAATTTTTTTCTCTTCTGATAATAATA
TAAAAAGAAGTTTGGCGCGCTTTTCATTCAGCTTTTCATTCAGTTTTTTT
ATGAGATGGAAGTTGGTCGGTTGTCTTTTGGTTGCGAAAAATACTTACTG
CGAGAGAATGAAAGAATGGTATTCTGAACTTTTGTTCATTTTCTTCTCTT
TCTCATTATTCAAACTCATGCTTTGCTTTAAGACTCTCTCATAAAGGAGG
TTTCTTATCTCCGGGCTAATTTTTAAGCTGGTATGTATGGATTTTCAAGG
GCGGTGAATGAAAAATTCGTTAAAAAAAGCCAAAATATTTTCTTCTCTGA
CCAAATTTTCATAGATTTCTTGAACTTCATTTGTCGAAATATTTTTTAAA
TAATTTTTATTTTTCAGAGAAATTTTTACCGCTGCTAAGAAAAAGAAGTC
GTATAATCGTCCCAGAAAAAAGTTTTTGGTCTTTTCGTTAAATTTTATAC
ACGCTTTTTTTTTAATAAGAATGGTGTAAATCTATTTCATCATGGATAAC
CTTAACTTTTTTGGGAAAATCATCAGAAAAATATTATTACAGCATTCTTA
GGTTAAGATCCCAATTCAGACTAGATTTAACATTTATTAGAACATACGTC
TCAACCATAAAATGGCATTTTTGTGAAAGGAGTGAGCCTTACTTGGGGGT
AATTGACAATTTATAATGAAAATGTTCATTAAAAATGGCCGTCTTGGCTT
TAAGATATTCTTAGCATTATTCTTAATTTTTTGGCCATTTTCATCATGGA
CATTCTTATAAAGTGTATTCTTATAAAAAAAAGCGTGTACCATGAATCTG
AAAAGATCTTAATTGTTTTATCCGAAATTTAACTTACNTTTTTGTTAAAT
TTCATACCATGAATCTGAAAAGATCTTAATTTTGTTGCCCCAAATTTAAC
TTACAATAGTGAGATTGGAGATTTTTTGAATTCTCAGCGTAGAAATATTA
ATAAGTTTTTTGTTCATCAAAAATATCTTCAGCCCAAATAAATAAAGTAT
TTTCTTTTCAAACTAAATGGAAATTCTAATTCCAAAATTTTAACTTAAAA
CAATTCTTTACTCAGAAGATATCGAAATTCAATTTTATTTTTCACGGAGG
AGATTTTTCCCGTTTTAAGTAAAATGATTTTTCACTGAGAAAAAAGTTTT
CATACAAAATTCAAAATTTTTTCGCCATCAATTCGAAAATGTTTTTCTCG
TTCAGATTGCAAAATTTCAGCTTTAAAGTATTTTTACTTTCTGAGATCTC
GAGGTTCGATTTTTTTAAGTGGACATATTCTACCGACACGGATAAAAATG
ATTTCTTGCTGAGCAAAAAGCTTTCCTTCAAAATTCAAAATTTTTTCGCC
ATCAATTCGGAAATATTTTTCTCGTTCTGTTTGCAAAACTTCAGCTTCAA
AGTATTTTTAGTTCTTGAGATATTGAGGTTCATTTTTTTTTGATTTTTTT
TTTACCGCGTGAAAAGTTTGAATTTCTTCACTTTTCTCTTCAGATGTTTA
CAAAATTTTGGACGAAAAGAAATTCGCGAAATTCGAAGAAATTTTCCAAC
AAAATCCGAACATCGTCAACTCGTTGCGTGATGGTTATGGTTTCACACTT
CTCATGGAGGCTGTTTGTAAAGATCGTTTCGACGTTTTCGTTCACTTGAT
GAAATATCCTCAAGATTTTTCACTCGTGGGCAATAATGGTTGGAACGTTC
TTCATTGGGTTGGTCGTTATGGAACAGTTCGTCATTTGGAAAAGTTTGAT
CAACAAACAATCAAAATGTTGATCGATGGAAGAGACAAATGGAACAAAAC
ACCATTGCATTTTGCAGCATGTTGGAACAAACATGACGTCATCAGATGGT
TGTTGGCCAAAGGAGCGAATCCTGAATTGAAAGATGAAGATGGTCAACGC
CCTGATGAACAACTCATGTCTGGTTGTGATGGTGTTACCAAAGAAATCTT
TCGATCGTTTCGTTCGTCTTGGTAAGAAAAATATCCACTTTTTCATGATT
ATCTTTTAGGATAGGAATATTTTTTTTTCGGATAGGATTGATGAAACGCA
AATTTTTTTATTTTGAATTGTCTTTTATACGAATAACATCTTTTATAAGA
ACAATACAATTGTAAGAAATCCTATTTCTTAGGCACGCAAATTAAGAACA
GCATACAACTAAAATTTAGTTGTTCCTATTAAGTTTCTCCTTGGTTTCTT
CCCAGCTGGCACACAACGCTCTTTCAACGTTCATCTAACGTTATATGACT
TTCTGAACGTTAGATAAACGTTGAAACAACGTTGCGTGCCAGCTGGGTTA
GAATAAGGATTTGCAATATTGATTCTTTAATTGATTTCAAATTAAAACAC
TTTTATTCGGAAAGGAGTGAAATAAAGAATGAATGAACAGTCAATGAATG
GATGACCGAATAAATAAGTAATTCATAAGAGAGGACTCTTTCTAGGAAAT
AGCATTTTCTTTCATCAAATTTTTCTTGGAAAGTAAAGGTCGATTTCCAC
GATGAGATAACGCGTGATAATGTGTGACAAAAAACTTGAGATAAAATTTT
ATCTGGTACTCGATGTAGAAATTTTCTTCCGACACGCTAAAGCTCTGAAG
GTCGGGAAAATTTTAACATCTGGAACCTTTGGGTTACCATTTTTCTCTTT
TTCTGTAAGGTTTCTCAGGCAGGAGAGATTTTCATGCTAAATTCAGTCGG
GTGCAACCGATAGTCAAGCAAAAAGTGTAAGGACAGCTAGACACGACTGT
GATGTGGTACATCAAACGATGACTACTATAGGTCTCCGATGCTATATTGG
CCCGCTCCTTCAGAGCTTTAGCGTGGGCGGCCGCCAATACACCATCGGAA
TATTAGATAAGATAAAATTTTGTTTTCTGAAACTACACCTGTTATTTCCT
TTCGTTCAAATTTTAAACAAAGAAAAGTTCAAATAATAAAAAAATGTGAC
TTAGATTTTGCCAGGTGAGTGGCGGTGTCATTTGATTTTGTCATGCGTTA
TCTCACAGAATTCTTTTTAAAATGAATTTCAATCCAAGAACACATGATAA
CGCGTGATAAAATTTTTTTTAGACGTTTTTCCACTACGAGATGATAAACA
AAAAATTTTCGTGATGGTGTGTGACAAACATGCTTTTAATAATAGCATAC
AGTGGAAACTAGCTGGGAGACCCGGCTACAATGTCCGTGTGGTTTTGAGG
TATAGCATTTAGTTCGAGCAGAAAATATCAGAGTTTTGACATAGTACTCA
CTGATTAGCTATGGGATGGATTTTGAAGTATAATTTTTGATTTGAGAGTA
TGGTCTCCAGACTAAGTGGAAACCGACTTTTATAACATACAGTAGAAACA
TACAGTCATTACAATAGAGAAAAGTATAAAACAATAAGATGAAAAAATAT
TTACGACTTCATGAAAAATGATCAATTTAGTACAATGTACGAAACTATTG
TAGTGTTTTTTTAACAGACTGGTTGTTCTATTAGATAACCATGCATTGGG
TTTTTTTTACAGATCGATGTTTTGATGGGTTGATCACACAAACATTTCCT
TTCCTTCGAAAATTTCCACAAATCACTTCTCTCCACCAACTCGAAAAGGT
AAAAGAATTTGATTACTTTTTTCAAGGCACTTCCTCTAAAATCTCAGACA
TCGGGCTGGTTAGTGACGTGGTGGTATACCCTTAAAACTTTTAAATCCTG
GTGAATAAGGGGGGGGGGGGGCGGTATTAGAATCTCAGATTGTACTAAAA
TGATTTTGGAGAATTCTTTGCATAACCCCACTATTGAAAAGTACTTTTTT
AGTACTCTTAGGTTCCAAATAAACGGGCCCCCCCGCTTGTTAATTTTTCG
AAAATTTTCCAACCCCCCCGGACCTTATTAGGACACCTCCGTTTATTAAT
CTCTAAGAATATTTTCAGATCTCAAAGAGAAGGCCCCTTATTTTGCTCTA
AATAGCCTGATTTTAAGCTATTTTTACCGTATTTTTGGGTTTCAGAAGTA
CAATTTCCAACCCCCCCGGCAATTAGGTCCCCCCCGTTTATTAAAATCTA
GAAAATTTTCCAACCCCCCCGTTTATTCGAACCCCCCCGTTTATTTGGAA
CCTAAGAGTACCAATGTACTAAAATTTTTATGATGAGTTTGTTTCAATCT
TATTCAGTTCTTAATAAATCTATGATAAATCACGTGGTTGGATTTTTAAA
TCAAAATGTAGATACTCTAACTATGTATGATTTGGCAATGTTCTTCCGTT
GATTTGATATTAGTGAACATTTCGAAGTACACTTTTTTATAAGAACAATT
TTATAACAACAACGAGGCTCAAAATTCCCAAAAGATAAGAACATTTTAAG
AAAAATGGCGAGCCCGAATCTACTCAATTTCAAGTAATTTAGGGGACAAA
GTAGTAAAATTGGGTATAACATTTATAATTTATAATAATTTCTCAATTAC
ATCCAATAATAAATAAAAATAGTATAAGAACAATTTGAGGCTCAAAATAA
CAAAAAAAATAAGAACAGCCTAGCCTCAGCAAAATTAACTGGTTCTTATG
AAAAAAGTGTGAATGGTTCGATTTCGAATCAGGTGTGCTTGATAACAATA
TTATTTGGTGAAAACAAAGTCTGAAATTTCCTTATCTTATGTTTTTGTTT
TCAGGTCTATCGTTCGTTGTTGCTTTCCAAAGTCCGAAATCCGTTTCACG
TCCCTCGCCGTTAGTGGTGCTCGCATTTTGTACACGACCTCCTTCTCGTT
TCTCGTACACGACGTTATTCGTTCCTCGTACACGATATTATTCGTTTTTC
GTACACGACGTTATTCGTTTTTCGTGGACAACATGCTTCCTTGTCGTTTG
TGACGATACTTAATTCGCAGACACTGTCGTTATTTGTCTTCGTTGCTCGT
TACCCTTGGAGTCTTTTTCAACAGTAGCAGTTTAACTTGCTTGTCCATTG
ATTGGAGTAAAGACCAGTTTGGAGTTTCATTTAGTGTAATGGTTTTCAGA
TTCAGTTGTCATTCGTGGTTATCACAGTATCATGTTTTCACATACAATGC
ATTTTGAAACAGTGGACTTTCTTCACAGTGATCCTGGCAAAAAGTAAACC
GTTTACTGGAATCACGCGATGCGTGTCGTTTATTCCGGCTAAGTAGAACT
TTCAATAGATACCTTAACCAAGGAAACTAATTTTGGCGAGAAATAAATTT
TGAGAATTTTGCTAGTTTTGCCTAATGTGTTTCCAGATATAATTGACAGT
TGAAACAAGAATGCCTGTAACTTTTGATATAATTTCGAAACTTTTTCTGT
TTGTTTTAGAGAATCAAAAGTGCTATATTTGAATGTATTTTTGGTTGAAA
AATTCGTGATTTTTAGCGGTTAAATTTGTGATTGAAAAAATTGAGCTTTT
TATCTACTTAAGCTATAACGTTCATTTTTACACCAGTGGTAGTTCAACCT
TAGGTTAAGAAGGTTGTCAAATTTAAAGGCAAATGGAAAAGTCCTTAGGA
AGATAATGGGACCCGAAATACCCCTTGCTAGCACTTTTTTTCTGTGAAAC
ATCAAATCTCCAAATTTTTAATTTTACTTCTCGCCAAAATTTCTCATTGA
TTCAGAACTTAATTTGTTGGGCATTTCGGAATTGAAAAAGATTTAAAAAG
TCAGCATTTATTTTGGATTTTGATGAACCTGCAATCAGCTGGACAAGGAC
CTGAAATAATTCTGGCATCAAGTGATTTACGAAAATTTTATATTTATTTT
CACGAAGAAAAAACAAGAGTTCATAAAAACGAAAAAATACATTTTTTTAT
TTTTAGAAAAAATTTGAATATTATTATTACAGAATATAAATTTTACATGT
ATAAATAGAGTAACTTTGTATTTATTGCAGTTTCAACCTAAGAAATATTC
AAGAAGTCCGATTGAACTTTTAGCGATCCATGCTAACTTTGGGAACGAAT
TTGTCTGGGTATGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029217XLOC_029217Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045714-exon-scaffold_100-1575043694:43358..43510TCONS_00045714-exon-scaffold_100-1575043694:43358..43510Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1575043694:42818..42931TCONS_00045714-exon-scaffold_100-1575043694:42818..42931Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1575043694:42179..42331TCONS_00045714-exon-scaffold_100-1575043694:42179..42331Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1575043694:41809..41871TCONS_00045714-exon-scaffold_100-1575043694:41809..41871Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1575043694:41227..41411TCONS_00045714-exon-scaffold_100-1575043694:41227..41411Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1575043694:40531..40650TCONS_00045714-exon-scaffold_100-1575043694:40531..40650Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1575043694:37789..37853TCONS_00045714-exon-scaffold_100-1575043694:37789..37853Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1575043694:35390..35867TCONS_00045714-exon-scaffold_100-1575043694:35390..35867Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1575043694:33763..33848TCONS_00045714-exon-scaffold_100-1575043694:33763..33848Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1575043694:31396..32706TCONS_00045714-exon-scaffold_100-1575043694:31396..32706Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1510915933:43358..43510TCONS_00045714-exon-scaffold_100-1510915933:43358..43510Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1510915933:42818..42931TCONS_00045714-exon-scaffold_100-1510915933:42818..42931Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1510915933:42179..42331TCONS_00045714-exon-scaffold_100-1510915933:42179..42331Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1510915933:41809..41871TCONS_00045714-exon-scaffold_100-1510915933:41809..41871Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1510915933:41227..41411TCONS_00045714-exon-scaffold_100-1510915933:41227..41411Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1510915933:40531..40650TCONS_00045714-exon-scaffold_100-1510915933:40531..40650Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1510915933:37789..37853TCONS_00045714-exon-scaffold_100-1510915933:37789..37853Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1510915933:35390..35867TCONS_00045714-exon-scaffold_100-1510915933:35390..35867Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1510915933:33763..33848TCONS_00045714-exon-scaffold_100-1510915933:33763..33848Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1510915933:31396..32706TCONS_00045714-exon-scaffold_100-1510915933:31396..32706Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1491911889:43358..43510TCONS_00045714-exon-scaffold_100-1491911889:43358..43510Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1491911889:42818..42931TCONS_00045714-exon-scaffold_100-1491911889:42818..42931Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1491911889:42179..42331TCONS_00045714-exon-scaffold_100-1491911889:42179..42331Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1491911889:41809..41871TCONS_00045714-exon-scaffold_100-1491911889:41809..41871Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1491911889:41227..41411TCONS_00045714-exon-scaffold_100-1491911889:41227..41411Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1491911889:40531..40650TCONS_00045714-exon-scaffold_100-1491911889:40531..40650Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1491911889:37789..37853TCONS_00045714-exon-scaffold_100-1491911889:37789..37853Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1491911889:35390..35867TCONS_00045714-exon-scaffold_100-1491911889:35390..35867Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1491911889:33763..33848TCONS_00045714-exon-scaffold_100-1491911889:33763..33848Clytia hemisphaericaexon
TCONS_00045714-exon-scaffold_100-1491911889:31396..32706TCONS_00045714-exon-scaffold_100-1491911889:31396..32706Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:31396..43510 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.00414017	0	0	0	0.0487285	0	0	0.0489764	4.2007	3.68914	0.2184	0	0.288682	0.0936357	15.4333	6.71925	0.178947	0	0.197971	0.163946	0.5953	0	0	0.332601	0	0.384364
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045714 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top