TCONS_00046295 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046295
Unique NameTCONS_00046295
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1342

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046295 ID=TCONS_00046295|Name=TCONS_00046295|organism=Clytia hemisphaerica|type=transcript|length=1342bp
CGATTTTTTTTTGCGGTGGCAAAAATGTGCCCTTCAAAAACTGAAAACCG
CCTGCCGCCTGAAGGAAAAACGCCATGTTGCAAGTGTTGGGGGGACTGGG
CGGTTGTGGTTTTACTACTCAAGGTATGAAGCGAATAGAAACGGACTTCG
ATTTGAAAAGGTGTGTGACCACGCAGCGAGTTATTGTGGAAAGCGATGTT
GGAGCCAACCAGAACATCTATAGATTTTGACCAACCAGAATACTTTTCAT
CTCAAGCCACCAACCAGAAACCATCACTACCCAGTTCCTAGAAGTTCCTC
AAAACAAAGTTTAAATACAAACACAAATGGGTGATCCCGTCAGTTATGGT
GCACATCAGTCCAATTCAGAAGCTGGCCAATTGTTGGCAACCTACTGGCC
ACGTGTCATGGCTGATATCCGGACCAAACCATTTTTGCAGAAAACTGGAA
AGAAAGATGAACCAATTCAAGAACTTCCGCTTGCAAGAATCaagaaaata
atgaaacaaGATGGTGATGTGAAGATGATAAGTGCTGAGGCTCCCATACT
ATTTGCCAAAGCTGCAGAGATTTTTATCAGCGAATTATCTTTGCGTGCTT
GGATTCATACAGAAGATAATAAGAGAAGAACTTTACAGAGAAATGATATA
GCGATGGCAATAACAAAATAtgatcaatttgattttttaattgataTTGT
TCCAAGAGATGAACTGAAACCTGCAAAGCGACAAGAAGAAGTTGTCCGTC
AACCTCCGAACGTGATGGCACCAGAGCAAGTCCAATACTATTTCCATTTA
TCACAACTTCAATCAAATGCAGCAGCTGCAGCAGGGACTACCAACTCATC
TGCAACTCCTGTTCAAGCAACCGCCAACACGCCACAAATCACCCATTTAC
CACCAGGCGCACATGTAATCCAACAGAACGGTCAATTCATTATTGCCACA
CCTCAACAATTAAGTGGTCTACAATCAACCGGTGCAACTCCAGCACAAAC
TGCCAACGGTGCAGTTCAACCACAGATTGTTCAGCTTGCCCAACCCCCGC
CACAAGCCGCCCAACAGAATACATCAACAACACCTGCGTCAGCTGAGGGG
ACACAGAGTGCTGTGCAACAATCGACTTCAAATGTTGTGCAACAACAATC
TACTGAACTGAGCACAAGTCAAGCTCAATCAAACACAACTCAGGTACAAT
GTTtcatatagatttttttttaagttgtgcgacaaaagaaaatttgggCG
AAATATTTTGCTATTTCTGACGCACGTTGAAGCCGAAATTGTTATTTCAA
AAGGTCAAGAAAGTCGATCAGATATTCTTCAACACCTCCTTG
Run BLAST on NCBI

transcript from alignment at scaffold_108:384255..395813-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046295 ID=TCONS_00046295|Name=TCONS_00046295|organism=Clytia hemisphaerica|type=transcript|length=11559bp|location=Sequence derived from alignment at scaffold_108:384255..395813- (Clytia hemisphaerica)
CGATTTTTTTTTGCGGTGGCAAAAATGTGCCCTTCAAAAACTGAAAACCG
CCTGCCGCCTGAAGGAAAAACGCCATGTTGCAAGTGTTGGGGGGACTGGG
CGGTTGTGGTTTTACTACTCAAGGTATGAAGCGAATAGAAACGGACTTCG
ATTTGAAAAGGTGTGTGACCACGCAGCGAGTTATTGTGGAAAGCGATGTT
GGAGCCAACCAGAACATCTATAGATTTTGACCAACCAGAATACTTTTCAT
CTCAAGCCACCAACCAGAAACCATCACTACCCAGTTCCTAGAAGTTCCTC
AAAACAAAGGTAAATGAAAGTATAATTTTTTAAATGTGCAACCATAAAAA
GCAAATCTTATCCTTCAGCTATATCCTAAGGTTTGGTCCTTTTTTACGAA
ATTTTATGAAAAACTTGATCACCACTGTGATCACTGTGGAGTCAGAGAGG
CATTAGGCTATTCCATTTTTAATCCATAATCATAAAGGAGTATTCACAAA
CTTTTCCAGGCGGTCTTACTTAATCCCAGATTTTCCAATGGGTTTTAATT
GTTTTTGAATATTTCCAAGGGCAGGGGGTTATTGAATTTTTTCCAGGGTA
TCAGAGGAGCTTAAAGAAAGTTTTCCAGGACCTATATTTGAGGAATTCGA
TGAAAAACCCATAAATTACTTTCCAGGGGGCTCGTGCAGCCAGGGATTAT
ACTCTAGTTGTTACAAGATATACTCTACAGGACAGGATTAAAAGATTGGT
CAGAATCACTGATTGAAAACAGGTTTTTTTCCTCTCTGACCTCCCCAATA
ATGGGCCATTCCAGTTTTTATTCGTTACCCCCCAATGGACGACATGGAAT
TTCCGTAGCAAATTGCTTTCAAGAAAGTCCGGAATTTCCGTAACAAATTT
TCAAAATACCTATCAAAACAGTGGAATTCCGTTACTGTAACCTAAAAAAA
TCATGGAATTCCAATACTTTAATGCAACATTAAGTAAAATTCATGGAATT
CCGATACTTTCTCTTTAAAGTTTGCCTGGAATTCCGTGCCAAAATTTATT
TCAAAAATTGATGTCATCCATTAGGGGGTAATTTTTTTTTTCTGGAATGG
CCCAATCTGTCCGGCTCTAAAGAAGGGTGTTGGAATTAGACGAGGGATGT
CGACATTAGACCAACTTACGGTATTTAAGAGAAGTTCTCTTCATTAGGAG
ATATCTTTATATACCTTAGTTAGGAGATTTTTTTACCATGCTGATTTTTG
ACCTTACAATGGGCAGTTAGTGAAGCCCCCCCCTGCCAGCCCCCAGCGGA
CTCTCAATTCACGCAATCACGCAATTTTTTTTTGAAATTCACGCATTCAC
GCAAATTTTCCTCGAGTTTCATGCAATAACTCAATTTTTCAGAAAATCGG
GGAAACATTGGAAAATCGGGGACACTGCACACCATCAGTGGAAAAAAAAC
TAAAATTCACGTATTCACGCACAAAATGGCCCAGATTCACGCATTCACAC
AGTCAAAAAGTGGATTTTCACGTTCACGCAAGTTTTTTCAATTCACGCAT
TCACGCATTTTTTTTTCAATTTTCTCGCATTCACGCATACCGCTGGGGGG
GGGGCGTGTTAGTCACACTAGGAAATTTTAAACTTTCAGAAAAAACAACA
TCAGTCATCTACACAGGATGTATTTGCAACAACAAGGATGAGAGTTACCT
GAATCAAGTTCAAGATCCCAAGACAATCAATTAAAACGAGACAGCGCTTC
GATTTTAAGGCCTTGTTTATACGCTAAAGTAAAAATAATAACCCACATGT
AAATGGGTCATTGTTGAGGTCCGGCAAAATTTCCAGGAAACAGCCTACCC
AATGGTGCGCGGATCTAGGTGGGTTCCCTTAGATCTTTTTCTTGGGAAGT
TGATCTTCAAATTAGTTTTCAAGGTTGGCTTGACTCAAAGTTTTTCATCT
ATAGCTCAAATTTTAGGCAATTTCTCAAAGTTTTTGAAAATGTTAATTTC
ATTAAAAAGTGCCGGGTTATTTTTTCATGAATACCTTTAGAAGTTTTGCG
CTTTTGCAGCATTAATCTTTGGCAAGACGCTAGTGTGACTAGCTGATGGG
CTATTCCAAAAAAAAATTGTACAGGGGTATTGACAAACTTTTCTCACTAA
CCCCCCTGGAAATTTTTGATAACAATTATCCCCTGGAAATTAGGAGTCGA
CACCCCTGGAAAGTGAAATTTTGTGAAAAAGGGCCTGGAAAGTGACTATT
GATGTCAGTTTCAGTTTAGGAGGGGAGAACCCCCTGGAAACCTTTAATGG
GTCATTTCCCCCTTGGAAAATCTGAAAATGAACAAAAACCCCTTGGAAAA
TCAAGGCTCAGACCCCCCTGGTCTGGTCTGGAAAAGCTCGTCAATACCCC
TGTATGGTTTAAAAATGGAATAGCCCAATCATCTTGCGGTATACTGCAAT
TGCGGTATAAATGTCACTTTTACATTTTTCATAATATACTGCAATTGCAG
ATTATTCAAAAAACAGAATTCAAGATTCAAGGAGAAAACAGGCAATTTTT
GTACATAATTGACAATATCTTTTTAATACGCACAGGCAAAATATTTTTTC
TGTAGATCAGATTCCTTAATAAAGACAAACTCTCTTCTTTTATGATTATT
TACAATGTTTGTTTATCTTTGTTGACCAGTGCTATTATAAGCCTTTGTAG
GCTAACCACGAATGAAAACTACTGCAATTGCAGTATACTGCAAATTGAGG
GATATCCCTGACTGTCTATAGATCGTCTCAGTACGTCATTTTCTTCCTTC
TGACAAAATTTAGTTGAAATCTGCTTATATTTAGAAAAAGGTGTTGCGAA
AATCATTATCTTTCATTTTGATTTGGTTACTTCAGCAGTAATAAGGCTAA
TTTTGTGTTTTTTTGACAATTGAAAGCAAATCTTCCGGTGTTCCGGAGCA
CAAAAAACAGCACTTTTTGGGTCCAGAGCGCTGAGAGGGTCCTACCTTAA
GGAAATCAGTCAAATGTGCCAAATTCTCCTAGTTTAGGTATGGTTCTCTT
AAGTAGGAGACTAAAAATCTCCTAAATAAGGTAATCCTCTATTTGGGTTT
TCTCTTATCTAGAGTATAATCCTCACCTGTCCTAACTCAATTTCCAGGGG
GTTATGCTGATCAATTACCCCTACGAACAACTAATATGGATCAAATGGTT
GATAGTGTAAAACCCACCAAAGTGTTAATGTACTAATCTATAAAAACGTA
AGATAATATAGAAACAACAGGAGTGTTGATAGTATACCCCAGACAGTCCC
AGGTAAATGCCTGGGATAGAAAAAACTATTTTTCCCTAGATATGTGACTT
GTGCACCACCATGCGCATCTGTAGAGGCACGCTGGGCGGTCATTCAAATT
TACTGCACGATCACCATGTACACTGCCCAACCCTTTGAGTACGTTGCGCT
GCCAGCACGGCACATCACAGTGCCAGAACACTGTGGAATCGTTTGAGTAC
GTTGCGCTGCCAGCATGGCACATCACAGTGCCAGAACATCGTGGAACCGT
GTGAGTGCGTTGCTTCGCCAGTACAGCACATCACAGGCATATTTCTCTAA
TGTTGCACGAACAACACACCAAGTTCGGGGGCGTCCAAGGCACTAAGTTT
CTAAATAAATGTTAAAATCCCTGGACATTTAACAAGAAATCGCTCGACTG
TCTGGAATATCAGCATGGTCATATACCCCTGTAAATTGATTACAAATGGA
ATAGCCCATTGTCAACAATGTTATCTCCCCAACCACTCCCTGTATTTATC
TTTTGCATAGTCAGGCAGCTGAGGTCACATAAAAATGAACGGGGTGCAAA
CAATCTAATAAAACCATTTTTAAATTATACAGCCCAGATATCTATCAACT
GGACCTATCCAAATAGTTGTTATGGAGAATGCAACAATCTATTGAATAAC
AAATAACTCCACATACATTATTTTCCCTTAGCAATCGCGTTCTCCTATTC
TCTTATTTACATGTCATCCTCGTTAACATTTTGGGTCCCAGATGACGTCA
TATAGGCCCAAGATGATAGAATCCAATAACCATTCAAAAGCTCTCAAAAA
TCAATATAGAAGAAGACTTTTAAGAGGATATGTATAATTTCTCAATATAA
CTCAAGAAAATTGATTCTGAAAAAGGGGCAAAATTTCCACATTGTGACGT
CATTAGAATTACAAACCGTTATTAAAATTTCCAGGTGAAATTTGGAAATT
TTATGGTTTTAGGTGGGAGAAACAAGTTAAGGTGGGGATTAATTTCTTTA
GGTGCGATTTTTAGTGTTTTGGTAAAAGTTAATGTTAGTTTTTTCTTCTT
TCCAATTTAATAATAATTTCTTCTAAATTTTATATTCTAAATAATTATTT
TACTATCTATACTAAACTTTTCTCCTTTTTATTACCGGGTGTCTCTGAAA
AAACTTCCCCCTGTTTGATTCAAAATTGCGAAAAAGTGAAAAAATATATT
AGCTTGATTTTTTCGAAATCGTTTAGAGGATGGTTTAACTTAAATTTTGG
TATATCAAACTTTAAAATTGCTTCATTAGACCAAAAGTTATGACAAAAAG
AGTAAAAAATCTTTTTTCAAAAAGAGCGAAAAAAGANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTTTAGAGGAGGGTTTAACTTAAATTTTGG
TATATCAAACTTTAAAATTGCTTCATTAGACCAAAAGTTATGACAAAAAG
AGTAAAAAATCTTTTTTCAAAAAGAGCAAAAAAAGACGAAAAAACAGGGT
ATAGTTACAGCTAATATATTTTTTCACTTTTTCGCAATATTGGATCAAAC
TAGGGGGAAGTATTTTCAGAGACACCCGGTATTATACTGTAAGAATTTTT
GTTTCGTTCCTCAAAATAGTATAATTTTTCGTGGGGATAGCATTTTTAGC
TGGGATCTGGGAGTTTGGATTGAGGTTAGGAATTTTAGGGTTAGGTGGGA
CCTAAATTTTTAGGTGGGACCTGGAATCCCCTTGCACACTATGTAGTATC
TTTTGTACTATGCTGGTCAGTGCTTGTTAAAACTATGTAGAATGTTTGGG
TAATGTTTGGATTGTAATCGGTAAATATCCAGCAAAATATCAAAATTAAT
AAAGTTTATCAAAAATTCAGCAAGACTAATTTAACATGTTTTTGTTTTCC
ATCTCAGTTTAAATACAAACACAAATGGGTGATCCCGTCAGTTATGGTGC
ACATCAGGTATTAACTTCAGAGTTTTTCATATATCATAGTTGAGTGAATG
AAAGTATTTCTAATATATTTAGTTTTATCTTAAATGATCGCCAATCAGTT
GCAAAAGTTTATATTTTTATGGAGAGCAAGTACTCCAATGTTAGCAAAAG
AAATTCTCTCTGTTCTTACTTTTGATCATCTTTTGTAACCAATGTTGATT
ATCTGATCTGATCAATTATTTATTTATTATATTTTAGTCCAATTCAGAAG
CTGGCCAATTGTTGGCAACCTACTGGCCACGTGTCATGGCTGATATCCGG
ACCAAACCATTTTTGCAGAAAACTGTAAGTTGTATGATTTTATTATTCTA
TAGTCAAATTCACTTAAGCAAACTCACCTTTAAAATCATGTCAATATGTC
AATTTTTAAGTATTGTATGTTATATAATATGTCCCAGGGGGCACTCGTTC
TGAAAACAACCATATATTCGGCCCAAAAATTGACTTTTAAAATCAGACGC
TTACAGTGCAGGAATAAGCTACGAAAATTGAAACCCTTACAGTGTGGAAA
CTGACAAAAAATACACCCTTACAGTGCATCATTCTTTTCATCAGACCTTT
TCAATGGAACACCTCCCTTTCAAAAAGGTAATAAGACATATAGGTATCAT
TCAGTGTGTTACTTCTTCTTTCGGAATTTATTTTTTGGACCTACCTGGAG
GTGCTCTGGAGGTGCTATAAATTAACCCATGTTCTTAGTTAGTTTGTGCG
TTCTTTTATTACAGTACCAGATTTTCTCAATATCGATTTTTTGCACAAAA
ATGTGCATTAATTCAAATGAGAGACCAGATCCAAAAATGTCCCATAAAAA
ACTGTTTTTTGGGATTATTTTGAGAATTAATCAAAAGTTTTTCCCTCGAT
GGGTATTAATACTACCAACAACTGTCTGTAGAACCAGAAATTGCTGTTTT
TTGCATTTCCATAAATTTTGCATATTCAAGAATTCACGTAATTATTGTTA
TTAAACACAATTTTTTTGTTAATGGGTTAATGATATTTTCAGGGAAAGAA
AGATGAACCAATTCAAGAACTTCCGCTTGCAAGAATCAAGAAAATAATGA
AACAAGATGGTGATGTGAAGATGATAAGTGCTGAGGTATTTGCCAATGTT
CTTTTTAATCAGTTCTTTTAAAGGTTGCAATTCAAATCATGGTTTTCATT
TTATCAAAAATTGACTGTTTTGCTGCCAACCATATTTTTGTTAACGAAAA
AAAACAGCTAAATCTTTAAAACAGATACCTAGTACTTTGTGTTTTATTTG
TTCAAGATATGGCTTTGACTCGATTAGCAAAATCACTGATGTCTTGCTTT
CTTTTTAATAGTGATAACAGTTTTCTCTAAAGTTTGCTAGAGTTGTAGTT
GTAGTTGCTGTTCTCCAAATTTTACAAATACCTGCATCCCCTAATGAAAA
CAAGTATTTTACCACTTTTAGGCTCCCATACTATTTGCCAAAGCTGCAGA
GATTTTTATCAGCGAATTATCTTTGCGTGCTTGGATTCATACAGAAGATA
ATAAGAGAAGAACTTTACAGGTATAATATCTATCCTAATCTTATTGGATT
TTCGTTTCTTTTTTTGAATCAATGAGAAACGTGTGCATTAAAATTTTGAA
GTGTCTAGAATTTAGATAACTTACTGTAGGAATCACTTAACATCTGGAAA
AACTGGGTGCTCATATCAGTACATCATAAACTCAAAACAGATTTATGTTG
TAAACTTCTGCCTAGCAACCTTTCTTTGCATTTAACGTTTTTCTTTCCTC
TTTTTAGAGAAATGATATAGCGATGGCAATAACAAAATATGATCAATTTG
ATTTTTTAATTGATATTGTTCCAAGAGATGAACTGAAACCTGCAAAGCGA
CAAGTAAGCGTNTTTGTAACCAATGTTGATTATCTGATCTGATCAATTAT
TTATTTATTATATTTTAGTCCAATTCAGAAGCTGGCCAATTGTTGGCAAC
CTACTGGCCAAGTGTCATGGCTGATATCCGGACCAAACCATTTTTGCAGA
AAGCTGTAAGTTGTATGATTTTATTATTCTATAGTCAAATTCACTTAAGC
AAACTCTCCTTTAAAATCATATCAATATGTCAATTTTTAAGTATTGTATG
TTATATAATATGTCCCAGGGGGCACTCGTTCTGAAAACAACCATACATTT
GGCCCAAAAATTGACTTTTAAAATCAGACACTTACAGTGCAGGAATAAGC
TACGAAAATTGACACCCTTACAGTGTGGAAACTGACAAAAAATACACCCT
TACAGTGCATCATTCTTTTCATCAGACCTTTTCAATGGAACATCTCCCTT
TCAAAAAGGTAATAAGACATATAGGTATCATTCAGTGTGTTACTTCTTCT
TTCGGAATTTATTTTTTGGACCTACCTGGAGGTGCTCTGGAGGTGCTATA
AATTAACCCATGTTCTTAGTTAGTTTGTGCGTTCTTTTATTACAGTACCA
GATTTTCTCAATATCGATTTTTTGCACAAAAATGTGCATTAATTCAAATG
AGAGACCAGATCCAAAAATGTCCCATAAAAAACTGTTTTTTGGGATTATT
TTGAGAATTAATCAAAAGTTTTTCCCTCGATGGGTATTAATACTACCAAC
AACTGTCTGTAGAACCAGAAATTGCTGTTTTTTGCATTTCCATAAATTTT
GCATATTCAAGAATTCACGTAATTATTGTTATTAAACACAATTTTTTTGT
TAATGGGTTAATGATATTTTCAGGGAAAGAAAGATGAACCAATTCAAGAA
CTTCCGCTTGCAAGAATCAAGAAAATAATGAAACAAGATGGTGATGTGAA
GATGATAAGTGCTGAGGTATTTGCCAATGTTCTTTTTAATCAGTTCTTTT
AAAGGTTGCAATTCAAATCATGGTTTTCATTTTATCAAAAATTGACTGTT
TTGCTGCCAACCATATTTTTGTTAACGAAAAAAAACAGCTAAATCTTTAA
AACAGATACCTAGTACTTTGTGTTTTATTTGTTCAAGATTTGGCTTTGAC
TCGATTAGCAAAATCACTGATGTCTTGCTTTCTTTTTAATAGTGATAACA
GTTTTCTCTAAAGTCAGTCTTTCCGGGTCCGATTGAGAAAAAAATTTTTT
TGGTAGAGTTGTAGTTGTAGTTGCTGTTCTCCAAATTTTACAAATACCTG
CATCCCCTAATGAAAACAAGTATTTTTCCACTTTTAGGCTCCCATACTAT
TTGCCAAGGCCGCAGAGATTTTTATCAGCGAATTATCTTTGCGTGCTTGG
ATTCATACAGAAGATAATAAGAGAAGAACTTTACAGGTATAATATCTATC
CTAATCTTATTGGATTTTCGTTTCTTTTTTGAATCAATGAGAAACGTGTG
CATTAAAATTTTGAAGTGTCTAGAATTTAGATAACTTAATGTAGGAATCA
CTTAACATCTGGAAAAACTGGGTGCTCATATCAGTACATCATAAACTCAA
AACAGATTTATGTTGTAAACTTCTGCCTAGCAACCTTTCTTTGCATTTAA
CGTTTTTCTTTCCTCTTTTTAGAGAAATGATATAGCGATGGCAATAACAA
AATATGATCAATTTGATTTTTTAATTGATATTGTTCCAAGAGATGAACTG
AAACCTGCAAAGCGACAAGTAAGCGTNTACCTAGTACTTTGTGTTTTATT
TGTTCAAGATATGGCTTTGACTCGATTAGCAAAATCACTGATGTCTTGCT
TTCTTTTTAATAGTGATAACAGTTTTCTCTAAAGTTTGCTAGAGTTGTAG
TTGTAGTTGCTGTTCTCCAAATTTTACAAATACCTGCATCCCCTAATGAA
AACAAGTATTTTACCACTTTTAGGCTCCCATACTATTTGCCAAAGCTGCA
GAGATTTTTATCAGCGAATTATCTTTGCGTGCTTGGATTCATACAGAAGA
TAATAAGAGAAGAACTTTACAGGTATAATATCTATCCTAATCTTATTGGA
TTTTCGTTTCTTTTTTGAATCAATGAGAAACGTGTGCATTAAAATTTTGA
AGTGTCTAGAATTTAGATAACTTAATGTAGGAATCACTTAACATCTGGAA
AAACTGGGTGCTCATATCAGTACATCATAAACTCAAAACAGATTTATGTT
GTAAACTTCTGCCTAGCAACCTTTCTTTGCATTTAACGTTTTTCTTTCCT
CTTTTTAGAGAAATGATATAGCGATGGCAATAACAAAATATGATCAATTT
GATTTTTTAATTGATATTGTTCCAAGAGATGAACTGAAACCTGCAAAGCG
ACAAGTAAGCGTCAAAACCTCCGTCCAGTTTCATTTGGATAATTGTTACC
GACTATCAAGTGAAAACCTTTCCTTTTCAATATCAGAAAAAATGAAAATA
AATTGCTTATAAAAAACAGTACCAGATGATATAATAGTGGTTCTTTGGCT
TTTCTTCAGTCTGATGTTTCATATCAGACATATTTTTATTTTATATCAGG
CCGGGTACTTGTGTTTTATTGTGTTCTTATTTTGTGTCGTGTAAACAAAT
AAATTGATTTTCTTTCCTTTCTCTATCTAAAATTGCCCTATTTTGAGTCC
AATCATGCATGGCGTTCTAAATCTAGATTGAGAACGGCATGAGTCCAATC
AATAAAAAGAACTTATGATCTCAAATTGAAGAATCTTGCAACTAAAAACA
AGATTACTTTTTATTAAAAACAAAACTTTTATCATTAACAGGAAGAAGTT
GTCCGTCAACCTCCGAACGTGATGGCACCAGAGCAAGTCCAATACTATTT
CCATTTATCACAACTTCAATCAAATGCAGCAGCTGCAGCAGGGACTACCA
ACTCATCTGCAACTCCTGTTCAAGCAACCGCCAACACGCCACAAATCACC
CATTTACCACCAGGCGCACATGTAATCCAACAGAACGGTCAATTCATTAT
TGCCACACCTCAACAATTAAGTGGTCTACAATCAACCGGTGCAACTCCAG
CACAAACTGCCAACGTAAGCTCATCACAATAGTATGGTAGAGTTCATTCC
ATTCATAGTTTTCTTTTGATGCGCTTAAAATGTCATCAAAGTTGACAGTT
GACGCTCTCTAATTCGATCTTCAAGGGGAATTGAATTTTCATTGAATAAG
GGAGCTTATCGAATAAAGGAGCGTCGTTTATGAGAGTTTCTTGTTGACGG
GGACTTTAAATTTCATCCAATAAGGGAGCCTATCGAATAGTAGAACGTCG
AATTAGAGAGCGTCAACTTTATTTAAAAGGGTTTTATGTCATTTTTATTG
GTTCATACGTTATGCTCTATCTCACCGCCTTTTCGATATTCTAGATCCTT
TGAGTGATTTTTTCAAAAATTTCCAAAATGTTTCATGAAATTCCACATTT
TTTCTTTGTTTTTTTAATCAAATGCCTCAAAAATCTTTACATTTTTAGTC
CTACTTTAGAGGTCTAAACTAACCTTTGTTCATTCGCCCGTTCGTCTGTT
ACCAGCTATTCTCGGGATCGGCCCATTAGTTTTTTCAGATTTTTTGCATA
GTGATGCAAAATGACAGTACCCAAAAAGTGAGTCCGATATACAAAAGAAA
TTTTTGGGTGAAGTGGAAAATATGGGCTAGATTTTGGGCTTTTGTCAAAA
TTCATTTGATTTTGTTGAGTTACTTAGCATGGTTTGACTTCCAAAAAAAT
GGGGATTCCTATCTCTAAAACATCGGAAATCCATTGTAAAACAAGTTTCT
TCATGTTTTCAAGCTTACGCTTCTCTGTGCTATGCTGTTATTTTTCCTTT
TTCGTCAAAATATTTTCATTGCCAATCACCATGTTTTCGACTACCTGTAT
CAGGTCAGCATGTTGCTTGTCATTTTAAATTTAACCTCAATTAAATCTTT
TTCTTCTGAAATTCCATTTTATACGGGCCCACGCAATCTAGAATTAGCTA
ATTTAACAACTATTTAACAAATAGGGTGCAGTTCAACCACAGATTGTTCA
GCTTGCCCAACCCCCGCCACAAGCCGCCCAACAGAATACATCAACAACAC
CTGCGTCAGCTGAGGGGACACAGAGTGCTGTGCAACAATCGACTTCAAAT
GTTGTGCAACAACAATCTACTGAACTGAGCACAAGTCAAGCTCAATCAAA
CACAACTCAGGTACAATGTTTCATATAGATTTTTTTTTAAGTTGTGCGAC
AAAAGAAAATTTGGGCGAAATATTTTGCTATTTCTGACGCACGTTGAAGC
CGAAATTGTTATTTCAAAAGGTCAAGAAAGTCGATCAGATATTCTTCAAC
ACCTCCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029558XLOC_029558Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046295-exon-scaffold_108-1575043694:395505..395813TCONS_00046295-exon-scaffold_108-1575043694:395505..395813Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1575043694:390557..390606TCONS_00046295-exon-scaffold_108-1575043694:390557..390606Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1575043694:390240..390326TCONS_00046295-exon-scaffold_108-1575043694:390240..390326Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1575043694:387698..387790TCONS_00046295-exon-scaffold_108-1575043694:387698..387790Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1575043694:386592..386690TCONS_00046295-exon-scaffold_108-1575043694:386592..386690Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1575043694:386260..386355TCONS_00046295-exon-scaffold_108-1575043694:386260..386355Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1575043694:385550..385822TCONS_00046295-exon-scaffold_108-1575043694:385550..385822Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1575043694:384255..384589TCONS_00046295-exon-scaffold_108-1575043694:384255..384589Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1510915933:395505..395813TCONS_00046295-exon-scaffold_108-1510915933:395505..395813Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1510915933:390557..390606TCONS_00046295-exon-scaffold_108-1510915933:390557..390606Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1510915933:390240..390326TCONS_00046295-exon-scaffold_108-1510915933:390240..390326Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1510915933:387698..387790TCONS_00046295-exon-scaffold_108-1510915933:387698..387790Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1510915933:386592..386690TCONS_00046295-exon-scaffold_108-1510915933:386592..386690Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1510915933:386260..386355TCONS_00046295-exon-scaffold_108-1510915933:386260..386355Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1510915933:385550..385822TCONS_00046295-exon-scaffold_108-1510915933:385550..385822Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1510915933:384255..384589TCONS_00046295-exon-scaffold_108-1510915933:384255..384589Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1491911889:395505..395813TCONS_00046295-exon-scaffold_108-1491911889:395505..395813Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1491911889:390557..390606TCONS_00046295-exon-scaffold_108-1491911889:390557..390606Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1491911889:390240..390326TCONS_00046295-exon-scaffold_108-1491911889:390240..390326Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1491911889:387698..387790TCONS_00046295-exon-scaffold_108-1491911889:387698..387790Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1491911889:386592..386690TCONS_00046295-exon-scaffold_108-1491911889:386592..386690Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1491911889:386260..386355TCONS_00046295-exon-scaffold_108-1491911889:386260..386355Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1491911889:385550..385822TCONS_00046295-exon-scaffold_108-1491911889:385550..385822Clytia hemisphaericaexon
TCONS_00046295-exon-scaffold_108-1491911889:384255..384589TCONS_00046295-exon-scaffold_108-1491911889:384255..384589Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_108supercontigscaffold_108:384255..395813 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.50512	1.88708	0.973811	1.66726	3.66117	2.28103	0.608163	1.15203	0	0.709854	0	0.143205	0.314591	0.485792	0.366281	0.5241	0.322825	1.32354	0.685702	0.23918	0.415781	0.60841	0.739601	0.89654	1.77757	1.52986	0	0	0.477303	0.486297
Blast
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BLAST of TCONS_00046295 vs. Swiss-Prot (Human)
Match: NFYC (Nuclear transcription factor Y subunit gamma OS=Homo sapiens GN=NFYC PE=1 SV=3)

HSP 1 Score: 213.386 bits (542), Expect = 7.129e-63
Identity = 109/149 (73.15%), Postives = 122/149 (81.88%), Query Frame = 3 
Query:  360 SNSEAGQLLATYWPRVMADIRTKPFLQKTGKKDEPIQELPLARIKKIMKQDGDVKMISAEAPILFAKAAEIFISELSLRAWIHTEDNKRRTLQRNDIAMAITKYDQFDFLIDIVPRDELKPAKRQEEVVRQPPNVMAPEQVQYYFHLSQ 806
            S+S+A Q L ++WPRVM +IR          KD  +QELPLARIKKIMK D DVKMISAEAP+LFAKAA+IFI+EL+LRAWIHTEDNKRRTLQRNDIAMAITK+DQFDFLIDIVPRDELKP KRQEE VRQ  +V   E VQYYF L+Q
Sbjct:   11 SSSDAQQSLQSFWPRVMEEIRNLTV------KDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEE-VRQ--SVTPAEPVQYYFTLAQ 150
The following BLAST results are available for this feature:
BLAST of TCONS_00046295 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NFYC7.129e-6373.15Nuclear transcription factor Y subunit gamma OS=Ho... [more]
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