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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046386 ID=TCONS_00046386|Name=TCONS_00046386|organism=Clytia hemisphaerica|type=transcript|length=261bp
GATAGTCGCAAGGAAAACATACCTGCACTAGGATTGAGGAAAATAACTCT
CAGCTCACTCGAAAATATCCAAACTCCgAAAGCAAGATTGGTGTTCACAA
GCCTAGAGGCCTAGAGGGGAACATCACCTGGGACTCAGTAGCTTCGTTCC
ATTTGTCAAAAGATGCTACgttcaaaacaaagaagaacaaagaaaattct
ACCCGCGATAAAtGCGTTAAGATGCCGTGGAGGTTATTTACAACGGAGAC
GAAAGAAAAAC Run BLAST on NCBI transcript from alignment at scaffold_109:326511..327290+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046386 ID=TCONS_00046386|Name=TCONS_00046386|organism=Clytia hemisphaerica|type=transcript|length=780bp|location=Sequence derived from alignment at scaffold_109:326511..327290+ (Clytia hemisphaerica)
GATAGTCGCAAGGAAAACATACCTGCACTAGGATTGAGGAAAATAACTCT
CAGCTCACTCGAAAATATCCAAACTCCggttggtttttgttttgttagtt
ttaataCCTTTGCACTGCAAAATTAGTTGCCTTAAAGAAGACTTGAAACT
ATTATGGACGCCTTAGTATAAAGATTCTTAtggaagaaagaaaattaaaa
aaaatagtttatATGTCATTTGGGGTGAAAGCTAAAAAGAATATACATGA
CGTGTATAGACTTCAATTGTACAAAACCCTTTGTCCACTTTGATTTATTA
ATGTTTAAAGGATTCCATCTGCCCATTTATATCCAAGCGGATATTTTCTA
AATTACATTTAGAAAGCAAGATTGGTGTTCACAAGCCTAGAGGCCTAGAG
GGGAACATCACCTGGGACTCAGTAGCTTCGTTCCATTTGTCAAAAGATGC
TACgttcaaaacaaagaagaacaaagaaaattctACCCGCGATAAAtgta
agtgaaaaattgcatCGTTTATGGGTTCAATGCCTCTGAATTTTCATAat
atattgaatttgaattgcaatttttttgtttgtgtcttttttgaaaagct
ttttctttttgatacgTTTTTCGATAAGGTTCCAATCCTAACGAGAAGTA
AGTGAGTTAACTTTACAGTAAGTAATTGTTTTCGTTGTCAAACACAATGG
TtattaaattttattcatcCCTTTTATTTTAGGCGTTAAGATGCCGTGGA
GGTTATTTACAACGGAGACGAAAGAAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046386-exon-scaffold_109-1491911889:326511..326588 | TCONS_00046386-exon-scaffold_109-1491911889:326511..326588 | Clytia hemisphaerica | exon |
| TCONS_00046386-exon-scaffold_109-1510915933:326511..326588 | TCONS_00046386-exon-scaffold_109-1510915933:326511..326588 | Clytia hemisphaerica | exon |
| TCONS_00046386-exon-scaffold_109-1575043694:326511..326588 | TCONS_00046386-exon-scaffold_109-1575043694:326511..326588 | Clytia hemisphaerica | exon |
| TCONS_00046386-exon-scaffold_109-1491911889:326873..327007 | TCONS_00046386-exon-scaffold_109-1491911889:326873..327007 | Clytia hemisphaerica | exon |
| TCONS_00046386-exon-scaffold_109-1510915933:326873..327007 | TCONS_00046386-exon-scaffold_109-1510915933:326873..327007 | Clytia hemisphaerica | exon |
| TCONS_00046386-exon-scaffold_109-1575043694:326873..327007 | TCONS_00046386-exon-scaffold_109-1575043694:326873..327007 | Clytia hemisphaerica | exon |
| TCONS_00046386-exon-scaffold_109-1491911889:327243..327290 | TCONS_00046386-exon-scaffold_109-1491911889:327243..327290 | Clytia hemisphaerica | exon |
| TCONS_00046386-exon-scaffold_109-1510915933:327243..327290 | TCONS_00046386-exon-scaffold_109-1510915933:327243..327290 | Clytia hemisphaerica | exon |
| TCONS_00046386-exon-scaffold_109-1575043694:327243..327290 | TCONS_00046386-exon-scaffold_109-1575043694:327243..327290 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_109 | supercontig | scaffold_109:326511..327290 + |
Blast
The following BLAST results are available for this feature:
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