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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046756 ID=TCONS_00046756|Name=TCONS_00046756|organism=Clytia hemisphaerica|type=transcript|length=1510bp
ttcatgcgttaatcaccatctgaagtattcttaggtttttatgtgctacc
tgACCTCACTACCTggattcgccaaatttaatccctttAAATGTTTTCGG
CTGATTAGGAAAGATTAAAGaaagaactttttttttcttgggAATTTTGC
GAACAATCTGACTTTTTATACAGGGgcaggggtggacgaacctttttaag
CCAAAAGAAGATTCTTTAAGATATGTGGATACCCCatggaaaatggcaaa
acttGCTAGAAACCCTTGAAAAATTTGCTCTATACCTTAAAGTGACAGTG
GACGaattaaaattagtcatttaCCCACTAGAATTTTTAGAATAACCTTT
CTGCCACTCGAAAAAGTTTAATCCTTAGACCCCCTGTAAATACTTCTAGG
actaccccctggaaatgttcgccCACACCCCTTGATTTcgtccccattcg
aaattccatgtttaaaaattgcaagagttgcactccaaaatcattcctac
tggattttttaactttggaacaatagaatttctatcccctttgggatttc
aataggattTTTGTacccactgaagaaaaaagttccaccggggctgtgag
acagggatgtgagaATAAACATTCGGATAACAAAGGTTTCGAATCAGAGG
GGGAGTTGACTGCGTAAAGGGAATTGAACTCGACTCATTTTTCCGttaga
tttttttatcttttctgttGTGGTAAGGTTTTCGAAGAAATCTATTCtcc
ataaaaaataataatatacaTTATCcataaaaatgaggaaaaaaaacaca
gaaagaAAACACGAACTAATTTCTATAAACATTATTAAACACCTATGTAC
AGAGGATATTTGAGAAATTTGTCAAATAGACCAAATTCGTATGAAAACGG
TCAAAAGATGGTCACGATTATATTTACTCTGGGATTCAACAATTAAATGC
AAGGAAAAAAGAGAAGTTGCATAATTACTGATTTATTGCCCAGAGAAAAT
TGATTCAAGTCTCCTAAAAattcgggacaagctggagtttttacaagctc
tatttgatttggttggtcgttgaccagtaataaaacaattttgttacttt
ttctaaagaacgcgtcatctctatcacttcaaatgaccaattagtggagt
atcttgtaaaaactccagctagACAACTCGAACCCAGGCTTCAAAGGCGG
GTTGATAGATTTTATTGATATCGAACTAAACAGAATTATGATAGATCATA
CTAAACTTATAAATtatattccaaaaaaatgtaaatattgtaAATAACAA
CATTATATAATAGATCTAAAAAATTTGtaaatctttaatttctcaATATA
ATACTTTAATTTCATCTCACATCTcacaagaaaacaaaattcaaataaaa
ttttgcattttttttttgtccAGCAAAATTAGAAAGTGCAACTAACATTC
TTTTAGAATATACATACATAGTCCTTCAAAGCAATGTTGGTATATGTAGA
GAAGActcta Run BLAST on NCBI transcript from alignment at scaffold_116:826351..827860 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046756 ID=TCONS_00046756|Name=TCONS_00046756|organism=Clytia hemisphaerica|type=transcript|length=1510bp|location=Sequence derived from alignment at scaffold_116:826351..827860 (Clytia hemisphaerica)
tagagTCTTCTCTACATATACCAACATTGCTTTGAAGGACTATGTATGTA
TATTCTAAAAGAATGTTAGTTGCACTTTCTAATTTTGCTggacaaaaaaa
aaatgcaaaattttatttgaattttgttttcttgtgAGATGTGAGATGAA
ATTAAAGTATTATATtgagaaattaaagatttaCAAATTTTTTAGATCTA
TTATATAATGTTGTTATTtacaatatttacatttttttggaatataATTT
ATAAGTTTAGTATGATCTATCATAATTCTGTTTAGTTCGATATCAATAAA
ATCTATCAACCCGCCTTTGAAGCCTGGGTTCGAGTTGTctagctggagtt
tttacaagatactccactaattggtcatttgaagtgatagagatgacgcg
ttctttagaaaaagtaacaaaattgttttattactggtcaacgaccaacc
aaatcaaatagagcttgtaaaaactccagcttgtcccgaatTTTTAGGAG
ACTTGAATCAATTTTCTCTGGGCAATAAATCAGTAATTATGCAACTTCTC
TTTTTTCCTTGCATTTAATTGTTGAATCCCAGAGTAAATATAATCGTGAC
CATCTTTTGACCGTTTTCATACGAATTTGGTCTATTTGACAAATTTCTCA
AATATCCTCTGTACATAGGTGTTTAATAATGTTTATAGAAATTAGTTCGT
GTTTtctttctgtgttttttttcctcatttttatgGATAAtgtatattat
tattttttatggaGAATAGATTTCTTCGAAAACCTTACCACaacagaaaa
gataaaaaaatctaaCGGAAAAATGAGTCGAGTTCAATTCCCTTTACGCA
GTCAACTCCCCCTCTGATTCGAAACCTTTGTTATCCGAATGTTTATtctc
acatccctgtctcacagccccggtggaacttttttcttcagtgggtACAA
Aaatcctattgaaatcccaaaggggatagaaattctattgttccaaagtt
aaaaaatccagtaggaatgattttggagtgcaactcttgcaatttttaaa
catggaatttcgaatggggacgAAATCAAGGGGTGTGggcgaacatttcc
agggggtagtCCTAGAAGTATTTACAGGGGGTCTAAGGATTAAACTTTTT
CGAGTGGCAGAAAGGTTATTCTAAAAATTCTAGTGGGtaaatgactaatt
ttaattCGTCCACTGTCACTTTAAGGTATAGAGCAAATTTTTCAAGGGTT
TCTAGCaagttttgccattttccatGGGGTATCCACATATCTTAAAGAAT
CTTCTTTTGGcttaaaaaggttcgtccacccctgcCCCTGTATAAAAAGT
CAGATTGTTCGCAAAATTcccaagaaaaaaaaagttctttCTTTAATCTT
TCCTAATCAGCCGAAAACATTTaaagggattaaatttggcgaatccAGGT
AGTGAGGTcaggtagcacataaaaacctaagaatacttcagatggtgatt
aacgcatgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046756-exon-scaffold_116-1491911889:826351..827860 | TCONS_00046756-exon-scaffold_116-1491911889:826351..827860 | Clytia hemisphaerica | exon |
| TCONS_00046756-exon-scaffold_116-1510915933:826351..827860 | TCONS_00046756-exon-scaffold_116-1510915933:826351..827860 | Clytia hemisphaerica | exon |
| TCONS_00046756-exon-scaffold_116-1575043694:826351..827860 | TCONS_00046756-exon-scaffold_116-1575043694:826351..827860 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_116 | supercontig | scaffold_116:826351..827860 . |
Blast
The following BLAST results are available for this feature:
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