TCONS_00048725 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00048725
Unique Name	TCONS_00048725
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3766

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_146:42909..52305+

transcript sequence

>TCONS_00048725 ID=TCONS_00048725|Name=TCONS_00048725|organism=Clytia hemisphaerica|type=transcript|length=3766bp
tcaaatataaCTTACAGTACTGTAATAAAACGTTCATAAGATTTAATTGT
TGGATTTTGATTATTGGAACAACTTGACCTGATCCCTGTAGAAATTCCGT
AAACAAAGTAGtttttgtcatctcttttatcaccaattTGGTATAACCAT
AAATACAACGGAGGCCTCtctcttttttaaaaatatatgcTTGAGTTact
atgtacatttaaaatttttttctttttttgttgattaaaataaaaatatt
gaggtAGTCGACTGAGGGAGAAGGGCAGTGGTATATATATAGATCGCAGA
GCTCGAGATGAAAGTGTAGCGTGGGAATCTCATcctgcaaaatcaaaaca
aacaaagtcTGGAAGATTGATTTCGAATAAAAATGGAGGAGATTGATTAT
AATGAATTAATGGGTGATTATCTCACAAGGCCAGGGTGGAAACGTGATGG
ATAGTTATCAAAGCCGTAGTGTGCATAGAATCACTTGGAAGAGCAGGAAA
AGATCTGGGAAAAGCTGTTATCATTTCTTGTTCGGGGCGGGGGCAGTAAA
ACCtccaattaacggacactctaaaagtcggacacctctgattagcggac
aattctattttccccggacatttcctagtcaaatcctcataaaaaagttt
ccaaatggcgaacactcaattagcggaccctccaATAAGCGGACaaaact
ttttgcatgaaatggCCAAACCCTACTTTTTtccctctaattagcggaca
tcgACGGTCAAAGTGGTCACAGACTTTAAAAAATTAGAAGGGATTGATTT
ATCCAAACTATTTAACACTTCAAAGTTTCATTGAACAAATTGCTTATAGA
CGTTTGGAGCGCTCCCTTTATCCAGTCGGTGAATTTGCTTACGTCGTAGA
AATAATAGGGACTTCGCGAGACTACTGTGattcataaaaactaaattgtC
GCATTTAGATAATCATTCTCTTGTTCTTCAATGTCCTAGTGTCTCTAGAA
AAGCACATCGGACCAAAGTCTTACATTAATCTCTTAATAGTACCTTCTTC
CAAAATTATAGCCATAattaaaaagtttctaaaaggcggacactaaCCCT
ATTCCCCGATgttgtccgctaattggaggttccactgtatataattatat
ataatttttttttcaaatatgaaTATATTTCAAACAATATCCTGCAGCTT
TCATTAAAATTATTGATATAGATAGGCCATCATAGTTATGCTTTGAAGAA
AAATATCGAACTCACGTCAACATTAATATTGTGTAAACCATATGTTCCAA
TTGGAGGAGGGGAAGGTGGCGGCGGTAAGGGCGGTTATGCCATCAGGGAA
CGAAAAAAATGGGGGTGGTTgaagtggtggtggtggtggtggttgtCTTG
TCGGTGAAGGTTTCTTGATAAAAGCCCTTCTTGAGATATCACTGACACGG
TGCTTAACTTAAACctgtaaaatgaaaataaagccTACTATATAGTTATG
CTTTAAAGAAAAACCTTTATATGAAGTTCACGTCAACATTAATATGGTGT
AAACCACATGTTCCAATTGGAGGTGGTGGTGGTTGAAGCGGTGGTTGTGG
TTGTAGACGAGATGGTGGTTGTCTTGGCAATGATGGACGGAATGGTAGTT
GGTGTTGCGGTGGTAGTGGTGCGGTTGGGGTGGTGGTGGCAAAGCAGATA
TTTGCATGTGAGGACGTTGTTGGGCCATTGACCAGGTTGCTGTTGGGCCA
TTTTCTAGAACATAATATGAAAAAGGGCCGTTCATTTTTCGTTACATGGA
TATTAGGTAATCTCTTATGTATTCACTGAATGTTCTTCATATCCTTTTTG
TAGTTTTTGCTTATATTTCGGAGAATGTCTTTGACCGGCTGCCAATCCGA
GAAATTGTCTACGAATGACCAACAGTCTCTTGGCTTGCAACTTTGCCACT
TTTTGAAGTTGATCTCGTCATTTTGGATCAAATCTACGTAGTTGTAGAGG
ATCTTTAAGATGGTGTCCCTTTGCCATTTACTAGCCTTGTACCAATCGTT
TCCGTTTGACttcttattcgcgaaattatgTATCTAGAACTCTCTAAGGC
TACGGCTGAAgcggcgagggaaatggcgagtaaggcaagtaatggcgggt
gaaagcaagtccgatatttgacgtacggcattatatcgactttgcttata
cggtgttttggtgtttttcccatacagagcaaagtagacaacgatcTACT
ATGAGTAAACCTGCTAGAGTAAACTTctggatttcaaaaatttaagtgAC
ATGAGACTCAAAAGATAACAAAATCTCcaaataaagaaataaatacaTTA
TCAGCTTTTATTTCACGAAACGCCTGCATGGCATCACGGGAAATTTCTAG
GAAATAGAAAATAGAGGTAATGCTGCTCGCCCAAACATTAAAACATACCC
GAACTAATGTAGAACGGCAAATCATGTCttaaaaacttctttttctcATT
CCTGATAAATGTATTGTCTTCGTACACAGGCATGGTGTAAAAGAGGTCAC
CCAAATTGTGAAATACTTTGTGTCGCCAACTGCGTTGCTGCAAACACTTG
AGGTGATTTATTGTTTGACTAGAGAGTTTGACGATATCCTCCTTCTTCAT
CTCTCGGCAAAGTTTTGCCAAACGACACATTTGGATTTCGGAGATCTCTt
tctctaaaaaaataagaGATGAATTTTACTATTACAATCCTTTTATAAGC
AATAGGATGGtgaaaactttgagaaattttcattccttttaaaaaaaatt
aaaggtaGTGTCTTGTTTAAAAAACCCCATTTTTGGACATTGAGCCAAGC
CTGTTCATAAAACATGATAATTTTAATTCTTTCTGCTTCCTTATGAAAAT
CGGAGAATTGATTGAATTGAAAAGCGTTGAAAGAAAAGGGATGAGATCTC
TTTCTTGACATGATACTATCTACTTTAATGTCAGAAAAATTGGcgtccag
aaaatttcgcgagtAAGACAATTCGCAAAATTTCGCGTGTTTTGATGGAA
TTTAGTTTCGCGAATCGACAAGATTAATTCATTTTGCAGGAAAttatttt
cgcaaaattggatTCTCCCACACTAAAACACTGGTAAAATAAGCTAAAAA
GCGTGTTTTTCTGTTCTAATAAGCAAAATTTGACTAAGAAAACCTGAAAA
CTCTGTCTCGTAGGAATCAATTTTCGCGAATGAGCCAAAAGATTTTTTCG
CGACTATTTCATTTCGCGAATTGAGGGGTCATTCGCGAAATTCGCGAAAT
TTTCTGGACGCAAAATTTTCTGACCTTAAAGTACTCAATTATCCATAACG
AGTCATTAAAATGTATCAACTAACCTTTAAGCATATCGTAGAATTCATCA
ATACCTGGTAAAAAAGAATAACAAAACAGTTTATGTGCTATAAAAGTAGG
CAATACTATTCTTTTCTCCCAAGGTCGTAAAATGCCCACTAATGAAAGTT
CATTTTACCTTCATCATCATTGTCATTCTCATTATTAACATGACCATCAC
CTTCGGGAGCACACTGACCTGATGCTGCTGAAAAGAAATAGAAAAATCAG
TCCGTTAACATTAACCGTAAGCTATTTACATAATGTTTGGTAACAACCAG
TTTCATATCTATAAATGTAGGCAATACTATTGAAGTATTCATACTGCTTC
ATTGTTATATCTCTTAATAAACCTAAAATCTCAGAATAATGCCTACTTTA
AAAAAGGCTTTACACC

Run BLAST on NCBI

transcript from alignment at scaffold_146:42909..52305+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00048725 ID=TCONS_00048725|Name=TCONS_00048725|organism=Clytia hemisphaerica|type=transcript|length=9397bp|location=Sequence derived from alignment at scaffold_146:42909..52305+ (Clytia hemisphaerica)
tcaaatataaCTTACAGTACTGTAATAAAACGTTCATAAGATTTAATTGT
TGGATTTTGATTATTGGAACAACTTGACCTGATCCCTGTAGAAATTCCGT
AAACAAAGTAGtttttgtcatctcttttatcaccaattTGGTATAACCAT
AAATACAACGGAGGCCTCtctcttttttaaaaatatatgcTTGAGTTact
atgtacatttaaaatttttttctttttttgttgattaaaataaaaatatt
gaggtAGTCGACTGAGGGAGAAGGGCAGTGGTATATATATAGATCGCAGA
GCTCGAGATGAAAGTGTAGCGTGGGAATCTCATcctgcaaaatcaaaaca
aacaaagtcTGGAAGATTGATTTCGAATAAAAATGGAGGAGATTGATTAT
AATGAATTAATGGGTGATTATCTCACAAGGCCAGGGTGGAAACGTGATGG
ATAGTTATCAAAGCCGTAGTGTGCATAGAATCACTTGGAAGAGCAGGAAA
AGATCTGGGAAAAGCTGTTATCATTTCTTGTTCGGGGCGGGGGCAGTAAA
ACCtccaattaacggacactctaaaagtcggacacctctgattagcggac
aattctattttccccggacatttcctagtcaaatcctcataaaaaagttt
ccaaatggcgaacactcaattagcggaccctccaATAAGCGGACaaaact
ttttgcatgaaatggCCAAACCCTACTTTTTtccctctaattagcggaca
tcgACGGTCAAAGTGGTCACAGACTTTAAAAAATTAGAAGGGATTGATTT
ATCCAAACTATTTAACACTTCAAAGTTTCATTGAACAAATTGCTTATAGA
CGTTTGGAGCGCTCCCTTTATCCAGTCGGTGAATTTGCTTACGTCGTAGA
AATAATAGGGACTTCGCGAGACTACTGTGattcataaaaactaaattgtC
GCATTTAGATAATCATTCTCTTGTTCTTCAATGTCCTAGTGTCTCTAGAA
AAGCACATCGGACCAAAGTCTTACATTAATCTCTTAATAGTACCTTCTTC
CAAAATTATAGCCATAattaaaaagtttctaaaaggcggacactaaCCCT
ATTCCCCGATgttgtccgctaattggaggttccactgtatataattatat
ataatttttttttcaaatatgaaTATATTTCAAACAATATCCTGCAGCTT
TCATTAAAATTATTGATATAGATAGGccacatggcgttctaaattcaagg
cctagcaagcgtgctttgacgtcaaaatcctGTGGACCTAATTAATGATG
TCATTGCAGTGTTGacgtcaaaagaaagaaaaNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTGGTCAGGTTTTACA
GCTTTGATGATTTCGTTGATAAATGTCCTGTCGGATGTGTTGTTGACTTT
GGACGAGATGTTGGTTAGCGTCTTGATTGAGTGGAGTTTGAAATCGGATC
GGAGCCTTGAGTAGAGTGAACGAGATTGAGAAAAGTAGCCGAATGCTCGC
ATCAGTACTTGTGGAGAATAGAGTTTTTTTCCAACTTGAGGTGGTTTCAT
AGATTctatttgttcttgtaaaatggTTTGATGCCGAGTGAATtcactat
ttttcaaaaagcaaagtgCTTCCTCAAGACACGACNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCATGAATCGAGATGAGTGATACGATTTTTCGAAAGGG
ATTTTATGGTACATTGAACACCCATTTTGTACGCAATGAATCTCAAATCT
TTCGAtattttcagtgaaaatgatggtATTCCTGATATATATTCACCAGA
TTGAATCCACTGTTCACCATTGACTTGCGACAATAGGCAAACCGAGTAAT
GTCAATCGATCGGAGTTGGCGATGTCCTCAAATTTTAGTTTGTCGCGATT
TCTAAACTCTTCCATCTCATCCTCCTGCTGGCTGCGAGTTTCGAAAGACG
TGCGTTTTGTTGGTCTTGGAGGTGGAAGAGGTGTTGGAATGGAACTGGAC
GGTatattatcaaagattgatggtGGTTCGATTGGTCGAGGAAGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCTTTCTTTCTTTTGACGTCAACACTGCAATG
ACATCATTAATTAGGTCCACaggattttgacgtcaaagcacgcttgctag
gccttgaatttagaacgccatgataGGCCATCATAGTTATGCTTTGAAGA
AAAATATCGAACTCACGTCAACATTAATATTGTGTAAACCATATGTTCCA
ATTGGAGGAGGGGAAGGTGGCGGCGGTAAGGGCGGTTATGCCATCAGGGA
ACGAAAAAAATGGGGGTGGTTgaagtggtggtggtggtggtggttgtCTT
GTCGGTGAAGGTTTCTTGATAAAAGCCCTTCTTGAGATATCACTGACACG
GTGCTTAACTTAAACctgtaaaatgaaaataaagccTACTATATAGTTAT
GCTTTAAAGAAAAACCTTTATATGAAGTTCACGTCAACATTAATATAGTG
TAAACCATATGTTCCAATTGGAGGAGGGGAAGGTGGCGGCGATGGTAGTG
CTACCAGGGGTCACAAAAACATTGGAGGAAGTTGAAGTGGTGGTAGACGA
GATGGAGGTTGTCTTGGCAGTGATGGACGGTGTTGCGGCGGTAGTGGTGC
GGTTGGGGTGGTGGTGGCAAAGCAAATATTTGCCTTGGAACCACCCATTT
CCCCATTGACCAAGTTGCTGTTGAAAATTCATATTTCAAGGTAGATGTGA
AAACTAAATTTATTTTCTGAGTCAACTTCACTTACTGTAGGTGTTTCACA
TTAGTTTCGAAGATCTTTGAATTTATCGATTTCCTCTTCGCTTCAAggtt
caaatttttgttttagtttgtGTTTTTATCCGTGTTTCTTGGAGCGAAAG
TGATAGATATAGATGGACCATCATATTAATgctttaaagaaaaactttca
taaGGAACTCACGTCAACATTAATATGGTGTAAACCACATGTTCCAATTG
GAGGTGGTGGTGGTTGAAGCGGTGGTTGTGGTTGTAGACGAGATGGTGGT
TGTCTTGGCAATGATGGACGGAATGGTAGTTGGTGTTGCGGTGGTAGTGG
TGCGGTTGGGGTGGTGGTGGCAAAGCAGATATTTGCATGTGAGGACGTTG
TTGGGCCATTGACCAGGTTGCTGTTGGGCCATTTTCTAGAACATAATATG
AAAAAGGGCCGTTCATTTTTCGTTACATGGATATTAGGTAATCTCTTATG
TATTCACTGAATGTTCTTCATATCCTTTTTGTAGTTTTTGCTTATATTTC
GGAGAATGTCTTTGACCGGCTGCCAATCCGAGAAATTGTCTACGAATGAC
CAACAGTCTCTTGGCTTGCAACTTTGCCACTTTTTGAAGTTGATCTCGTC
ATTTTGGATCAAATCTACGTAGTTGTAGAGGATCTTTAAGATGGTGTCCC
TTTGCCATTTACTAGCCTTGTACCAATCGTTTCCGTTTGACttcttattc
gcgaaattatgTATCTAGAACTCTCTAAGGCTACGGCTGAAgcggcgagg
gaaatggcgagtaaggcaagtaatggcgggtgaaagcaagtccgatattt
gacgtacggcattatatcgactttgcttatacggtgttttggtgtttttc
ccatacagagcaaagtagacaacgatcTACTATGAGTAAACCTGCTAGAG
TAAACTTctggatttcaaaaatttaagtgACATGAGACTCAAAAGATAAC
AAAATCTCcaaataaagaaataaatacaTTATCAGCTTTTATTTCACGAA
ACGCCTGCATGGCATCACGGGAAATTTCTAGGAAATAGAAAATAGAGGTA
ATGCTGCTCGCCCAAACATTAAAACATACCCGAACTAATGTAGAACGGCA
AATCATGTCttaaaaacttctttttctcATTCCTGATAAATGTATTGTCT
TCGTACACAGGCATGGTGTAAAAGAGGTCACCCAAATTGTGAAATACTTT
GTGTCGCCAACTGCGTTGCTGCAAACACTTGAGGTGATTTATTGTTTGAC
TAGAGAGTTTGACGATATCCTCCTTCTTCATCTCTCGGCAAAGTTTTGCC
AAACGACACATTTGGATTTCGGAGATCTCTttctctaaaaaaataagaGA
TGAATTTTACTATTACAATCCTTTTATAAGCAATAGGATGGtgaaaactt
tgagaaattttcattccttttaaaaaaaattaaaggtaGTGTCTTGTTTA
AAAAACCCCATTTTTGGACATTGAGCCAAGCCTGTTCATAAAACATGATA
ATTTTAATTCTTTCTGCTTCCTTATGAAAATCGGAGAATTGATTGAATTG
AAAAGCGTTGAAAGAAAAGGGATGAGATCTCTTTCTTGACATGATACTAT
CTACTTTAATGTCAGAAAAATTGGcgtccagaaaatttcgcgagtAAGAC
AATTCGCAAAATTTCGCGTGTTTTGATGGAATTTAGTTTCGCGAATCGAC
AAGATTAATTCATTTTGCAGGAAAttattttcgcaaaattggatTCTCCC
ACACTAAAACACTGGTAAAATAAGCTAAAAAGCGTGTTTTTCTGTTCTAA
TAAGCAAAATTTGACTAAGAAAACCTGAAAACTCTGTCTCGTAGGAATCA
ATTTTCGCGAATGAGCCAAAAGATTTTTTCGCGACTATTTCATTTCGCGA
ATTGAGGGGTCATTCGCGAAATTCGCGAAATTTTCTGGACGCAAAATTTT
CTGACCTTAAAGTACTCAATTATCCATAACGAGTCATTAAAATGTATCAA
CTAACCTTTAAGCATATCGTAGAATTCATCAATACCTGGTAAAAAAGAAT
AACAAAACAGTTTATGTGCTATAAAAGTAGGCAATACTATTCTTTTCTCC
CAAGGTCGTAAAATGCCCACTAATGAAAGTTCATTTTACCTTCATCATCA
TTGTCATTCTCATTATTAACATGACCATCACCTTCGGGAGCACACTGACC
TGATGCTGCTGAAAAGAAATAGAAAAATCAGTCCGTTAACATTAACCGTA
AGCTATTTACATAATGTTTGGTAACAACCAGTTTCATATCTATAAATGTA
GGCAATACTATTGAAGTATTCATACTGCTTCATTGTTATATCTCTTAATA
AACCTAAAATCTCAGAATAATGCCTACTTTAAAAAAGGCTTTACACC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_030969	XLOC_030969	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00048725-exon-scaffold_146-1491911889:42909..44133	TCONS_00048725-exon-scaffold_146-1491911889:42909..44133	Clytia hemisphaerica	exon
TCONS_00048725-exon-scaffold_146-1510915933:42909..44133	TCONS_00048725-exon-scaffold_146-1510915933:42909..44133	Clytia hemisphaerica	exon
TCONS_00048725-exon-scaffold_146-1575043694:42909..44133	TCONS_00048725-exon-scaffold_146-1575043694:42909..44133	Clytia hemisphaerica	exon
TCONS_00048725-exon-scaffold_146-1491911889:49285..49596	TCONS_00048725-exon-scaffold_146-1491911889:49285..49596	Clytia hemisphaerica	exon
TCONS_00048725-exon-scaffold_146-1510915933:49285..49596	TCONS_00048725-exon-scaffold_146-1510915933:49285..49596	Clytia hemisphaerica	exon
TCONS_00048725-exon-scaffold_146-1575043694:49285..49596	TCONS_00048725-exon-scaffold_146-1575043694:49285..49596	Clytia hemisphaerica	exon
TCONS_00048725-exon-scaffold_146-1491911889:50077..52305	TCONS_00048725-exon-scaffold_146-1491911889:50077..52305	Clytia hemisphaerica	exon
TCONS_00048725-exon-scaffold_146-1510915933:50077..52305	TCONS_00048725-exon-scaffold_146-1510915933:50077..52305	Clytia hemisphaerica	exon
TCONS_00048725-exon-scaffold_146-1575043694:50077..52305	TCONS_00048725-exon-scaffold_146-1575043694:50077..52305	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_146	supercontig	scaffold_146:42909..52305 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.119725	0.0999499	0.201391	0	0.273164	0	0.246867	0	0	0	0	0.318683	0.221968	1.24798e-06	0.138098	0.110336	0.082899	0.0761454	0.337718	0.13718	0.198611	0.215191	0.20168	0.724222	0.629268	0	0.22106	0.237296	0.436888

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00048725 vs. Swiss-Prot (Human)

BLAST of TCONS_00048725 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00048725 (transcript) - C. hemisphaerica