TCONS_00048802 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048802
Unique NameTCONS_00048802
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048802 ID=TCONS_00048802|Name=TCONS_00048802|organism=Clytia hemisphaerica|type=transcript|length=186bp
CAGATGAAGTATCGATGTTTCAGGTCAGGTATCATATTGATGAAAAACTC
TTTCCCTCAGTGTAATAAAGGCCGATTTGTAGTTTCAGATtccgaaatat
ttttaattagGTGTAAAGTTAGCATTCGTCTGATTGGATTTGAATAGCGT
ATTTAAATCCCATTTAAATTCATGatatattcatga
Run BLAST on NCBI

transcript from alignment at scaffold_146:299854..300039

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048802 ID=TCONS_00048802|Name=TCONS_00048802|organism=Clytia hemisphaerica|type=transcript|length=186bp|location=Sequence derived from alignment at scaffold_146:299854..300039 (Clytia hemisphaerica)
tcatgaatatatCATGAATTTAAATGGGATTTAAATACGCTATTCAAATC
CAATCAGACGAATGCTAACTTTACACctaattaaaaatatttcggaATCT
GAAACTACAAATCGGCCTTTATTACACTGAGGGAAAGAGTTTTTCATCAA
TATGATACCTGACCTGAAACATCGATACTTCATCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031021XLOC_031021Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048802-exon-scaffold_146-1491911889:299854..300039TCONS_00048802-exon-scaffold_146-1491911889:299854..300039Clytia hemisphaericaexon
TCONS_00048802-exon-scaffold_146-1510915933:299854..300039TCONS_00048802-exon-scaffold_146-1510915933:299854..300039Clytia hemisphaericaexon
TCONS_00048802-exon-scaffold_146-1575043694:299854..300039TCONS_00048802-exon-scaffold_146-1575043694:299854..300039Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_146supercontigscaffold_146:299854..300039 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048802 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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