TCONS_00053158 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053158
Unique NameTCONS_00053158
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1852

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053158 ID=TCONS_00053158|Name=TCONS_00053158|organism=Clytia hemisphaerica|type=transcript|length=1852bp
AGGGGCTTCCTTTTGGCTTGAAGGGATACAAGGAGATTATGGGTCAGATA
ATGACAGAAGGATTTTATTTCGAAAGAGAGGGTTTACAGGAGACTTTGGC
TCAGATTTTTTGTAAttataaaaaatcagaaattatCAGCTTTAATGGAT
TTATGTTTCAGtgaaataaatacaaaaaaataattaataattaaaaatgg
cacaaaaatttcttttcacttCTGAATCAGTGGGAGAAGGTCATCCAGat
aaacTTTGCGATCAAGTATCAGATGCAGTTTTAGATGCACATCTTAAACA
AGATCCAGATGCCAAGGTTGCATGTGAAACAATCGCCAAGACCGGTATGG
TTATGGTTGCTGGTGAGATCTCATCTAAAGGAATAGTAGATTATCAAAAA
GTTGTTCGGGACACAGTCAGAAGAATCGGTTATGACCACAGCTCCAAAGG
TTTCGATTGCAACACAATGAATGTCTTAGTGGCTGTTGAACAACAATCTC
CTGAAATCGCACAATCTGTACATTTAGAAAAAGACGAAAAAGATATTGGA
GCTGGAGATCAAGGTCTTATGTTCGGATATGCCACAGACGAAACTGAAGA
ACTTATGCCACTTACCTGCGTCCTTGCTCACAAATTAAACGAAAAACTTG
CAGAGAACAGGCGTAACGGCACACAACCTTACCTGAGACCAGATACCAAA
ACACAAGTCACAGTCGAATACGAAAATGATGACGGTGCTTGCAAACCGCT
TCGTGTACACACTATCGTCATTTCTACACAACATTCTGAAGATGTCACTA
cggaaaaaattcgaaaagacTGCTTAGAATTAGTTGTTAAAGCTGTTATT
CCAGCAAAATACTTAGATGATCAAACAATTTATCACATTCAACCGTCTGG
TAGTTTTATCATCGGTGGACCAATGGGTGATTGTGGATTGACGGGTCGAA
AGATTATCGTCGATACTTACGGAGGATGGGGTGCCCACGGTGGTGGTGCT
TTCTCTGGAAAAGATTTCTCCAAGGTCGATCGTTCTGCTGCATACGCTGC
TCGTTGGGTTGCCAAGTCTGTCGTAGCCGCTGGTCTTGCTCGCCGATGCC
TGTTACAAGTCTCTTACGCCATCGGTATCGCTGAACCTCTTTCTGTTTCT
GTTATCACCTACGGAACTGGCAAAAAGACCGACGCCGAAATCTTAGAAAT
TGTCAAAAAGAACTTCGATTTACGACCTGGTGTCATCGTCAAGGAATTAG
ACTTGAAGAAACCAATCTACGAGAGCACTTGTACGTACGGTCACTTCAAA
CCTGGTTTCACTTGGGAAGTAcccaaaaaaatgaatttctagaTACATGG
AACACACGTAACACAGAAACACTCTTGAATAATGTCGACCAAAAACCCTG
TACGATAAATCAACACATTGTATGTTATCGTAAAACATGATGATTTTCCG
CCGCCGGAAGAATGGTTATAGGTTTTGGTGTATATTATATTCAAATGGGA
CTTGCTTGTATAaattataataataaaaatgtcTTATAGGGTGTTGTAGA
TTATAAAGATTTATACTTTTTGATTAGGTTCGCTATCTTTATGTCAATTG
ATCCATGATTCTATGGGACTAAGCACTAGTTTCGTTTTCTTTTACACAct
tttgaattatatttttctttactagttttatgttttcttattttgaaatt
CACACTTTTTGGGTATCTATCTACGACGAGACAATGTTTTTGTAAATCAC
TTAAGGTTCATATACAATGactttgtattttttaaaagGGGTAACTCATT
TTAGAGTTACTCTATTGTCTTTCTAGAACATACATATTAAAATTGTAgac
aa
Run BLAST on NCBI

transcript from alignment at scaffold_226:500509..509305+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053158 ID=TCONS_00053158|Name=TCONS_00053158|organism=Clytia hemisphaerica|type=transcript|length=8797bp|location=Sequence derived from alignment at scaffold_226:500509..509305+ (Clytia hemisphaerica)
AGGGGCTTCCTTTTGGCTTGAAGGGATACAAGGAGATTATGGGTCAGATA ATGACAGAAGGATTTTATTTCGAAAGAGAGGGTTTACAGGAGACTTTGGC TCAGATTTTTTGTAAttataaaaaatcagaaattatCAGCTTTAATGGAT TTATGTTTCAGtgaaataaatacaaaaaaataattaataattaaaaatgg cacaaaaatttcttttcacttCTGAATCAGTGGGAGAAGGTCATCCAGGT TTGTATTTTTATTCTATAATCTTATTATTTGAACATGACAAATAGAAGCT ACTGTAAGAGGTTTAAAGAATATTAACGAAGTTATCAAACcctaaaattt tatttgatcgatttattaaaaataattgatCGATCGTGAGGAAGGAAGGG AGTGATTAAGTGTTAATTTTCATGACAAAGGAGCTTTGGTAATGAAATAT AATTCCAAGCACGACTGAATGCACTCAAACAACAATCAAATAAGACCCTT TTACCAGaaggcggtgtcaatcgaacaacttcaaacaaaaattgcaatcg aaccaatcgaatgtaatcgaatgcgattgaataattgcgattcaaTTTGT gtaacgtaatcgaatctcaatcgaacagctGATTCCTTGGTAATATTcta ttgtgttcaattgcgtttgagtaaggttagattggttctaTTGATAGtta tattcgattggttcgattcaTTGGGCGgatctttaaaaattgtttggttc ccgtcatttcgaCTTTACAAAGTGggtcggtcagtcggtcggtcgaaaat atttttttgtacatacATACCATCTTTGTTCATTGTAGGTACCTGCATTG TAAGCCCCATAATCATCATGCAACATCTTGTTTTTTAGAAAGTGATGCTT CGCGAGCGTGGTCTGCTTCCACGAAGGTCCGAATTATGAAATCGGgttaa aaatcgggaaatcatggataaactggtttttggTTCACTTTCCGATGGCG TGCCACGCTCGctatttcaatttgaaaacttgtaaatacTGACCGCGCAG ACAAAGGTTGACAATTAGGAATCCAGAAGTGGCAAAAGGGGTCTCCGACT CTCCGACTCTAACTTCAGAGtaaaaatcagggtcggtcgggacgggaacc aaacaatttttagagATCCGCCTTGTCAATTAccttcgattacgattatg ttcgatgagtttgatttgaaattagaTCACTCCAttagacagttagtcac actaggaaatctagctttcagaaaaatcaacatcagtcatctacaggata catttcaacaacaaggatgagagttacctgaatcaagttcgcaagacaat attaattaaaacataaagttggaaacaaaataaaacgtgcagcagccaaa atcaaccaaccaaaatttttcattcaattccCNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNtgagagtcaagtaaacgatatag cgctttcgcagcattaatctttgatacgcattttggcgggacgctagtgt ggctaactgttagagctttttagcgcaGGCGGCCGAGCACTTAAATACCG TAGGAAAGTGAATagaatctaatacaattgaatcaatcaaacgtaatcaa acataatcaaatacaattgaacgtaattgaagcaatcgaacggcaaatcc tgggtaatattccattgcaattcgattgcgttcaacaatcgaattgcaat tattagATTGTGAACAATCGAATTGcgattattcgattgtgttcaattgc gttcaattgattcggcattcgattcgttcgattgacaccgtctggctttT ATTAAACACAATGTCATGTTGGATAAAAAAAACTCCAGCACAAATCATGA TAACTCCACGTTTGAATTTATTTGAGGGAAACAATAACAATAACCAAACT TTTCCTTGCACCCATTAAAATGTTGAGTTATCGCAATTTATCCCGGTATT TTTAATAGTCCTTTGGGAGAACGCGACAACCTATTGACTGAGTTCCGCAT ATTAATTTTTAACGCAAATTTTTTGCACCAATCTTCAATCTTTGTATACT AAATGGGTTTATGAAACCATGTCACGCTATAGCCAAGTGTTTGACAACAT CCCTGATTGTCATGGCTGCGCTCACAGAAgggaaagtggtcaggggaaga gtctGGAAATTAGTGTTTTTTTAGAGTAAGTCGTTGCAGGGCAAATGTTT CGTAAaattaaaaacccactttcccgtggaaataattgacgtttggTTTT TTGGAACCCTTGGGgcataccgtaacttggtctaatgtcgacacccctct aattccgacaccctttttatcagctgaaatttatagaaaggttgaaactg tttttttgttgcttagtggtcagagaaaaataattctttttccatcagtg attcaagctttcattttattccttcctctaaagaagggtgtcagaattag acaagggatgtcaatattagaccaacttacggtaaggTAATAAGTTTTGA AAGAGAGCATATATAATTTGGGGTATTTTGGGTCCAATGACTTCAATTAA AACCTGAAAAATGCAATATCTCGAATTTGAGAAGACATggaaaagttttc ttaaattgGTTCAATCAAAATTggggatttgaaaaaaattttatgtttac TTTTCTTGCACAAAACCCCTTTAACTAAGGGTTAGCACCCCATTGCTAAG TTGTTGGCTTAAAAGTCCAAAATGATACCACTCTGAACCACGAAAAACAA TAGTTTTATCAGCTGCACTCCAAATCTCGTTATATTGATGTAGGAGTTTT AGTCGTAACTGTCAAGATAGCACATCAATTTCTTAGTCctttatttttgt ctatttggtCGCTAAGATTATGTAATGTTTTTGGAGTCATTACATGGAAT ATTTTGCGTCTTACAGTACAAAAAATATTCGGGGAGGCAATTAAAAATTG ACTTTTGGAAGGACAGGATaccattttttgttaaaagttagCAGTGAAAA TATTACATATTCCTCTGAATATGTTGTTTCCATGAGCAATAAAGTAAAAA AGTATGTTTGTGGGCCTGAGAACATAAACAAAGCATGTGTTTCTCTGTCA ATCAGAAATGCACAGCAGTTTCCTTTGCAACATATATACTATGTCTTATT TTAAAATATCTTATTTCAATGGCACAAGTACTATTAACTTGCTTCAGAAA GTTTCTTCTATGCAGTGGTGATAGTAATAAGGAACCTATTTTATAAAAGA CTTAAAATATGTTTACACATACTTGTTTAcattaatgttaattttttagG GGCATAGCTAGTATAGCTGACAGGTTTCATTGGCATTGCTTATGGAGCAG TGCATTTTGCTTGAGAAAGAATTCAGATTTATATCCAAAATCTTAACTCA TTCTTAGATTTAGATATGAGTTTTCCCTCCAATcactcaaaaaaattaaa aattaattgtTAAAAATTAGTTCAATACATGATAAGGTGTTgtagacaaa tttgtctaaaCTTTCACCATTCAAAAGTTGAAATAAGTTTGCTCGGTACT TAGAATTTCTCAAACTTCTTGTTGTATAGAAGAATCTCTTTTAATAACAT ActtcaactatttttttttagataaacTTTGCGATCAAGTATCAGATGCA GTTTTAGATGCACATCTTAAACAAGATCCAGATGCCAAGGTTGCATGTGG TAAGTGAATGGAAATAGTATAGTATTATATACTGAAATATTGTAATATTA GATATACTATAATATTTTAGTATTAATAATATACTATAGTATCATTTCCT TGATTTGATACTATAGATATATATGTTAGATACTATATTGTGTAGTATAg tgttttcaactttttaaagaggccaaaagaaatattatgtttctattttt cttaactttttcttaactttttccaaaGTCAAGGAATGGCAATTGGAAAT CTCTGAAAATCAGTTCTTACGTGGTTCTTACGTTGGGCGTCTATTATTGT TACGTTTGTAAAAGACACTTTTCAGCTTGAATATCTTGCCTTTAGAAATT TGCTCAATACAATAGAAAGAATATACAGGTCAAACATCTTAAATTATCTG ATTATCCTTTAAAAGAAGAACCTTaagtaaatatttcctttttctttttt ctgtcTAGAAACAATCGCCAAGACCGGTATGGTTATGGTTGCTGGTGAGA TCTCATCTAAAGGAATAGTAGATTATCAAAAAGTTGTTCGGGACACAGTC AGAAGAATCGGTTATGACCACAGCTCCAAAGGTTTCGATTGCAACACAAT GAATGTCTTAGTGGCTGTTGAACAACAATCTCCTGAAATCGCACAATCTG TACATTTAGAAAAAGACGAAAAAGATATTGGTTTGTGCTTTGCGTttaga atatattttttaactGCTTTTTCCAAATATCTGTTTTTACAGGCTAAATC CcgtcttgaaaattttgaagttttggaGGTAGTTTCACTCTCAAAAGCAA AAAACACACTGTATCACTATCAAAAGGAAGGAACCCTCTAATTTGACCCT AGTAAATATAAAATGGGCAGATAATTTGACAGATATTTAATTGGACCTCT TATTCCTCTTTGAAGGAAGGGCCTAGTTCTAAGCAGTCCCTATCATCTAA CTTActatcaaaaatttatttcgcaACAGGAGCTGGAGATCAAGGTCTTA TGTTCGGATATGCCACAGACGAAACTGAAGAACTTATGCCACTTACCTGC GTCCTTGCTCACAAATTAAACGAAAAACTTGCAGAGAACAGGCGTAACGG CACACAACCTTACCTGAGACCAGATACCAAAACACAAGTCACAGTCGAAT ACGAAAATGATGACGGTGCTTGCAAACCGCTTCGTGTACACACTATCGTC ATTTCTACACAACATTCTGAAGATGTCACTAcggaaaaaattcgaaaaga cTGCTTAGAATTAGTTGTTAAAGTAAGATTCTGTTTCACGCCTACCCTGC CCTGTTATCCTTTTTCTGAGCAATTTTTTGACTGTTTGAAATGCTAAAGA GATATTTTCAGTTTAACTAAATTACAAGACTTTCACCATTAtggaagaaa acatttttatgcAATAGCCTCtacaaattttataattttatacaATATGG CGGAAATTCACTAAGCTGCATAAGTTAGCAAAACCTGAAGAACCTACCAA TCCTTAGAAGAAATATGCATCAAGGGGTTTGGGTTTTACCCGAATAAAAT GGTGTGACATTTCTAAAGACATTTTAGGGAATGTCTTACATATAAAGAAA ATTGACACCATTTAGGCTTTCCAAACTTGGATAAGGTTAATGGATGTATT AGAATTAACGTTTGAGTCGATCTGGTTTGTGTTGATGAATTAATTAATTG GAATTTAAAAATAACACGTCAATTCTGAAGTCCTTGCTAGATTTTTGTTT CATGCATTTGGAACAAATGGTATACTAAAACGAATCATAGATCTTGCTGC TTACAATATATTTCTGCGCTATCTAAATGTGGAATTTGAAATGTAACTTA TTTCTTTTCAGGCTGTTATTCCAGCAAAATACTTAGATGATCAAACAATT TATCACATTCAACCGTCTGGTAGTTTTATCATCGGTGGACCAATGGTAAG TTATTCATCTATGTTTTTTGAATCGGTCCTTCAGAGTTTCTAAGCATAaa attgcttcacttttttctttccaTCGGAAGTTTGGTCTTACCTAAACCCA TttatatttctcagtacagtcCCCTCTGAAAATGCATAACACTCACGCAA TACGCAACACTTCCCTTAGAAAATGCACAACATTTTGCTTTGAAAGTACA CAACATTTTCCTTTGCCTTTGAAAATACACagcattttcctttgaaaata cacaacactttccttcgaaaatacacaacatttacctttgaaaatacaca acattttcatttgaaaatacgcaacactttcctttgaaaatacgcaataa tttttttgaaaacacaatACTTTCTCATGTTATGAAAATACAATACCttc tttagataaaaaaaacatgtatatttcctttgaaaatacacaacacTTTC TCTTAAATACACAAAGTAATTTTCTGAAAGCAgattgaacttttaaataa atttttctttagatACACGACATTTACGCgaatttttcctttgaaaatac acaatactctttttttccattttcctttAATAATACACTTCCAAACAGTT CTTTGGACTATACctcttttctttgaaaatacaccaaatgaaaataaaac ctcCTTTAAATCGGTCAAACACAAAAAGCCAAAGGCTGTGTTCACCACGA AAACAAAACAGATAACACAATTTTCATGACATTACTTTTGCAGGGTGATT GTGGATTGACGGGTCGAAAGATTATCGTCGATACTTACGGAGGATGGGGT GCCCACGGTGGTGGTGCTTTCTCTGGAAAAGATTTCTCCAAGGTAAAACA TTGACATCATTTTAATTTATGGTAGACATGTTGCTCACATTAATATCTCC ACTACCTGCAGTAGACATGCTGCTGGTTCACCGAAGCTACAATCTCTACA GACTCTCAACTCCTAATTTTGGTTATAGTCTATCGTTGTTTGAAGCTTAC GAGTATTaaattgaaaagtaatattatATTTCTAGAACTAGGTTTTCTTT GGTTTATGATTGAAAAGTCTGGcctattttttatgtttaatcACCAATAA AACGTTTACCGGACACGTCCGATAAAAAGGCCAAACGATACAGTTCCGTT ATATAGACTCAATCCTTGTTTCCAGGTCGATCGTTCTGCTGCATACGCTG CTCGTTGGGTTGCCAAGTCTGTCGTAGCCGCTGGTCTTGCTCGCCGATGC CTGTTACAAGTCTCTTACGCCATCGGTATCGCTGAACCTCTTTCTGTTTC TGTTATCACCTACGGAACTGGCAAAAAGACCGACGCCGAAATCTTAGAAA TTGTCAAAAAGAACTTCGATTTACGACCTGGTGTCATCGTCAAGTAAGTC ATATTTCTCTTGTCTTTTTGTAAGTGAACTTCGCCATAGctaaagtcatt ataaaaactaGTTTAAGAGAGTTCACCGAGGTCGAAGATGATGTCAGAGA TGATGATCTTCAATAAGAAGTTAGGTTGGGTTTTGTTATGACAAGTTTTC ACTGAATATAAGAAAATCCTTTCAAGTTGAGTATGATTACTGTAAGTTTC ATTCCTGTATTTCCATATCGTGGAAGATGAAAGTTTAATATACTTTTATT TAAcatctttgatgaaaaatgaagggGGCTTGATAACTAAATGTTTTAGT GCGATCACTTCAACTTTGACCCTCCTTTCTACACCTGTAGAAACCAGATC TACATTAGAGATGAAATCCCAGACGTAACTGTTAGTGGAGTGTTAATAAT TATTGATAGTGTCTACATTAATATTAACCCCAAAGATAATGTCTCTAGAT TTCGATTTCACAATACTTCACATGTCATATCATAACCATGACATTATAAA TAAGAGCTGTTTATATCAATAATACAAATCTTTATGACCCTACCGTGACA CAGCATTTTTTATATACTGTAAAAAAACTCGTTGAGAAAAAGAGGGGTTT CCCTTGAACATTGTTGCCACGTTCAAGATTAAAGATCCCTTATCAACAGA CTCTCAATTCCCTTTCAATCTCAAATAACATCTAAAACATGAAGCCTCGT TTTTCTTAATCTTACGTGTATCGTAATTTTCAAGTCTATAAGTAGCCCTT GCAATAAAAGGGGGAGGTTAACCTTGTCGTGACTGAGGTTCCATATGCTG GACATGCATGTCCTTTGAGAATCACGATAGTTTTCAAGCCATTAACGTTC CATAATAAAGAGCATCATTCAACGTATCTCCTACCaattgcttacacagc atttttaaacaaaacaaaagtttctcTCCCTACTGCGCCGCGCGAgtaca aattttgagaaattcttttgtgtATTCTGGTTAGTCAGCATAGAGGTGCG CCTCTATTCTATCATTAAAGAGTATCTTTAAAACAAAGACTGTTACGACC GTTCTAATATTGAACATTTCGTTTTACTTTTCTATAGGGAATTAGACTTG AAGAAACCAATCTACGAGAGCACTTGTACGTACGGTCACTTCAAACCTGG TTTCACTTGGGAAGTAcccaaaaaaatgaatttctagaTACATGGAACAC ACGTAACACAGAAACACTCTTGAATAATGTCGACCAAAAACCCTGTACGA TAAATCAACACATTGTATGTTATCGTAAAACATGATGATTTTCCGCCGCC GGAAGAATGGTTATAGGTTTTGGTGTATATTATATTCAAATGGGACTTGC TTGTATAaattataataataaaaatgtcTTATAGGGTGTTGTAGATTATA AAGATTTATACTTTTTGATTAGGTTCGCTATCTTTATGTCAATTGATCCA TGATTCTATGGGACTAAGCACTAGTTTCGTTTTCTTTTACACActtttga attatatttttctttactagttttatgttttcttattttgaaattCACAC TTTTTGGGTATCTATCTACGACGAGACAATGTTTTTGTAAATCACTTAAG GTTCATATACAATGactttgtattttttaaaagGGGTAACTCATTTTAGA GTTACTCTATTGTCTTTCTAGAACATACATATTAAAATTGTAgacaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033551XLOC_033551Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053158-exon-scaffold_226-1491911889:500509..500756TCONS_00053158-exon-scaffold_226-1491911889:500509..500756Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1510915933:500509..500756TCONS_00053158-exon-scaffold_226-1510915933:500509..500756Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1575043694:500509..500756TCONS_00053158-exon-scaffold_226-1575043694:500509..500756Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1491911889:504180..504257TCONS_00053158-exon-scaffold_226-1491911889:504180..504257Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1510915933:504180..504257TCONS_00053158-exon-scaffold_226-1510915933:504180..504257Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1575043694:504180..504257TCONS_00053158-exon-scaffold_226-1575043694:504180..504257Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1491911889:504717..504938TCONS_00053158-exon-scaffold_226-1491911889:504717..504938Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1510915933:504717..504938TCONS_00053158-exon-scaffold_226-1510915933:504717..504938Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1575043694:504717..504938TCONS_00053158-exon-scaffold_226-1575043694:504717..504938Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1491911889:505238..505530TCONS_00053158-exon-scaffold_226-1491911889:505238..505530Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1510915933:505238..505530TCONS_00053158-exon-scaffold_226-1510915933:505238..505530Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1575043694:505238..505530TCONS_00053158-exon-scaffold_226-1575043694:505238..505530Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1491911889:506120..506203TCONS_00053158-exon-scaffold_226-1491911889:506120..506203Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1510915933:506120..506203TCONS_00053158-exon-scaffold_226-1510915933:506120..506203Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1575043694:506120..506203TCONS_00053158-exon-scaffold_226-1575043694:506120..506203Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1491911889:506952..507050TCONS_00053158-exon-scaffold_226-1491911889:506952..507050Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1510915933:506952..507050TCONS_00053158-exon-scaffold_226-1510915933:506952..507050Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1575043694:506952..507050TCONS_00053158-exon-scaffold_226-1575043694:506952..507050Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1491911889:507384..507601TCONS_00053158-exon-scaffold_226-1491911889:507384..507601Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1510915933:507384..507601TCONS_00053158-exon-scaffold_226-1510915933:507384..507601Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1575043694:507384..507601TCONS_00053158-exon-scaffold_226-1575043694:507384..507601Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1491911889:508696..509305TCONS_00053158-exon-scaffold_226-1491911889:508696..509305Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1510915933:508696..509305TCONS_00053158-exon-scaffold_226-1510915933:508696..509305Clytia hemisphaericaexon
TCONS_00053158-exon-scaffold_226-1575043694:508696..509305TCONS_00053158-exon-scaffold_226-1575043694:508696..509305Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_226supercontigscaffold_226:500509..509305 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
258.903 261.861 306.055 314.573 25.795 21.238 20.0523 20.4479 59.4408 47.0468 111.844 156.083 251.474 240.363 277.16 240.645 339.351 281.98 315.356 239.402 331.527 352.287 230.427 221.43 145.668 120.99 457.378 664.896 345.429 360.204
Blast
BLAST of TCONS_00053158 vs. Swiss-Prot (Human)
Match: METK2 (S-adenosylmethionine synthase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 565.074 bits (1455), Expect = 0.000e+0
Identity = 281/378 (74.34%), Postives = 329/378 (87.04%), Query Frame = 2
Query:  209 FLFTSESVGEGHPDKLCDQVSDAVLDAHLKQDPDAKVACETIAKTGMVMVAGEISSKGIVDYQKVVRDTVRRIGYDHSSKGFDCNTMNVLVAVEQQSPEIAQSVHLEKDEKDIGAGDQGLMFGYATDETEELMPLTCVLAHKLNEKLAENRRNGTQPYLRPDTKTQVTVEYENDDGACKPLRVHTIVISTQHSEDVTTEKIRKDCLELVVKAVIPAKYLDDQTIYHIQPSGSFIIGGPMGDCGLTGRKIIVDTYXXXXXXXXXXXXXKDFSKVDRSAAYAARWVAKSVVAAGLARRCLLQVSYAIGIAEPLSVSVITYGTGKKTDAEILEIVKKNFDLRPGVIVKELDLKKPIYESTCTYGHF-KPGFTWEVPKKMNF 1339
            FLFTSESVGEGHPDK+CDQ+SDAVLDAHL+QDPDAKVACET+AKTGM+++AGEI+S+  VDYQKVVR+ V+ IGYD SSKGFD  T NVLVA+EQQSP+IAQ VHL+++E+DIGAGDQGLMFGYATDETEE MPLT VLAHKLN KLAE RRNGT P+LRPD+KTQVTV+Y  D GA  P+RVHTIVIS QH E+V  +++R    E V+KAV+PAKYLD+ TIYH+QPSG F+IGGP GD GLTGRKIIVDTYGGWGAHGGGAFSGKD++KVDRSAAYAARWVAKS+V  GL RR L+QVSYAIG++ PLS+S+  YGT +K++ E+LEIVKKNFDLRPGVIV++LDLKKPIY+ T  YGHF +  F WEVPKK+ +
Sbjct:   18 FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFGRDSFPWEVPKKLKY 395          
The following BLAST results are available for this feature:
BLAST of TCONS_00053158 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
METK20.000e+074.34S-adenosylmethionine synthase isoform type-2 OS=Ho... [more]
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