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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053169 ID=TCONS_00053169|Name=TCONS_00053169|organism=Clytia hemisphaerica|type=transcript|length=3457bp
CCTAGCATTAACTTTTTCTCCTGGCCTGGAAACTCCTTGAATCTCCTgga
atttattatatattttttcaaaatatcctggGATGAGACCATTCAAAAGc
TAAGAAAATATGGAATTAGTTACCATAATCCATAATAATCGTCCACTTCA
ACTTCCAAGACTCTTTTTAAGAGCAGATGATCTTGCTGCATGTTTTGCTG
TTGATCGGGAAGGACTACACTTAAAGTGTATAACTAACAATGGGgaaatt
aaaaactttattcCTCTTTCTGATGGAAAGTTTGAACTTGATCCCACCAT
CAACAAATACAACCTGGTTGCAGTAAATAATGATACTCACAGACTCATTA
ATAACGACAGTAGCAGTAGTAGCAGAACTCCAAATGTTAGGTATGGCCAT
GGTTCAATGAACAATGAAAACAACGAAATGAGAACTCCTACCATTGCATA
TGGTCGGAGAGGCAATGCTGGTCTGAGAGCTGTGCCGGGTTTTAAACGAA
AGTCAAACTCATCTCCTGTTTTACCCGTTCCTCTTGggaggaaaaaaaaa
gaagaaacaaaatcgaaaaagaaaatttcgatttgGTTGAGTGgaataaa
aaagattgaaaaggaCCGTAATCgtgaattttttcatcaagaagACTTAC
GTAACAAGGAACCTGTTAAATTTGAACCCTACCCTTTCTATGAAGTTCCG
GTTTGTTTGGAAGAAATAAGTTGCAAGGAACAGGTCAATGTAAGATCCAT
AATTGGAGAAATAAGACGACAAATAGGAGGCATGGATTATGTGATAACTG
ATAAAAAAGGCAACCCAATAAGGGATATGCCAAACACAAGGGGTGCTGAA
AATTGGGTTGGAAATAAATACATAAGAGCAATCGATGCAATCGCATACAA
GAAATGGCGACCAGCAACATTTGAGCTCATCAAAACAGATTATGAAATAT
ATTCTTCAAGCTCAGATTCAGAGTTCGGAGACATTCCACCCCCACCATCG
CCTTCATTTTCTGACCTTCACTTTTTGAACATCCAATCAAGCACTAACTC
AAGTTCGAGCTCCACTAGCACTACAGTAACCAACTCACCATCCACCAATG
TAATTGAAACTTCAACAACTCAAGTTGCTTCTTCGTCAACACATGTCTCT
TCTACAGCGATGCAAAATCAATCATATGTTTCAAACAGAGACTTACTGGC
TGAGATTGAACGCTTAGAAGAAATTAACAACAGAATTGAAAGCAAAATAG
ACCAGTTGCCAACCTTGCAACCAGAAACCTTGCAACCTGAAGTCTCACAA
CCAGAAGCAGTTGTTTCCAAAGCAGATGTTAAGGAATTGCTCACTTGTCC
CATATGCACTTGTTGCAATTTCGACATTGTATATTGTCATACCTGTAATC
AGTTTGCAGGCTGCAAAGATTGTATTTATCGCGTCGATTCGTGCCCGCTT
TGCCGGGCTAGTTTTTCCATCACTTGTGATGGATGTTCCAATGAAATCAA
TTTCCGCCCAAAATCGATCACGATTCCCGGATTACGCGATATTCTGGAAG
AATAGTCTTAGAATGCGCTCTATTTTGAAAGTACATTTTGAGATTTATTT
TTAAGAAGAAAGATTGCCATATTTAGATATTTTACGTTTTACTTTAGCTA
GCAGacgtttaaatttgaaaaacatcTAAAGGCTATTGTCAGTCGTCCAG
GTTTTAAGCATTTTTATGCACGGCTAAAAGGGTACAAAACTACGTTTGAA
GATTTTTATATTTAATAcattcattttatgtttttaaaaagaaaaagatt
ttgttgtgaagactttgttataatttttatttcagaacTTTTACtcatat
tattttattatttacttGTATTCATTATTGATCCACTTTAAGCTAAGGGG
ACACGGAAACAAATCTTCTAGCGATTgcaacaataaaaatttttgttgcA
ATCGCATGGATATGTTTCATTGTGTTCCCACATCAGATATCGCTATTTTG
CAACATTTTCCGCTAGATGTTTTTGTTGCagcaacaaaattttcatgttg
CAATTGAGAATTATACCCTCGTGTCCCCTCACCTTGAGAAgattttttgc
aacatttttttattttacccaATCAAAGTCGTTTATACAACTCAAAACAA
ATTATGACATAATCTTCCCATTTTTAACACGCAAGACATGAGTTCAAAAT
GGTGGAGTtgctttgttttcatttttatgattttatttcGTGTGCTAGGC
CTATACGACacggtgtaaaattttattgcGATTGCgacaatttgtttttg
ttgcaattgcacaaaaaaaatttccgtgTCCCCTTAGGtttaaggtattt
ttttttaaagacactTAGGGTTTTAACTGTGCTATTGATATTGTATTTGC
ACACAAATTACCTTTTACAGTTCAgtcatataaaaaatatatctgCTTTT
ACCACTGTGTACGAGAACCTATTTTGTTCCGTTAGTCCCTACAGTATTAG
CCACTACATTATAATTCTTAGTCTTGTCAAGAGTTAATTCTTAATGTGAG
CAAAGCTTTTCAGGTTACTAAAATTTGACGTCTGAGCTGGTCTGAGCgtc
tcttttttataaaaaaaacactttgtTTCCGACGAGTTTCACCCCTAACG
TTTTAGGAGTTTTTATTATGTGTAGAGTTTTAATCTCTTTTGATATTTAT
TGATTCATTGATCACAAGTTTATTATTTGTGTAGACTTTTATCTCTTTTg
atatttattgatttattgatcACAAGTTTATATTATTTGTGTAGAGTTTT
AATCTCTTTTgatatttattgattttttataagaaatatacgtattattt
attttgtaaaagtttAGGCTATTTTTATGTTGGAGTATCTGACATATTAT
ACATCAAAAGTTCCCAAATCTTACGTAGAATAGGAATTTCCATGCTTAGC
AAGGTCAAAATCGTATGGAATGGGCCAAATTTGGGCCCAGAAAGCCAAAA
AAGGCCTAAAATTATTATCCCCTCCCTGTACAAGTCGAATTTTGAAAGTC
TGAAACCATGCCATTTTCTGATAGTACTCATTAACATTTCGTGAAACCTT
CCAGAaggtgctgacgtcagcaacgAAATGAGCATTTTTGGACCTAAAAT
CATCCAAAACTTGGTTCCAGGTGATCAAAACctaacaaatgaccccattt
tttCATCAGCTTTTCGATTTGAATCTGATGATAACATCAAAACCCGATTT
TCAGACTTTCGAAATTCGACTTGATAATCGTGTTTAGGCCTTCTAGactc
aaattcttttttcttgcttgagccTTATTCTCAGCTCATGGACTAGTAGG
gatttttcagatttcttttttccctttaGCTCGAGTATGGCATTAttagt
ttttcttattttacttCTGATTAGGCTAGTTATCTTATGTTTTACTTCGT
ATTTTAT Run BLAST on NCBI protein sequence of TCONS_00053169-protein >TCONS_00053169-protein ID=TCONS_00053169-protein|Name=TCONS_00053169-protein|organism=Clytia hemisphaerica|type=polypeptide|length=481bp
MELVTIIHNNRPLQLPRLFLRADDLAACFAVDREGLHLKCITNNGEIKNF
IPLSDGKFELDPTINKYNLVAVNNDTHRLINNDSSSSSRTPNVRYGHGSM
NNENNEMRTPTIAYGRRGNAGLRAVPGFKRKSNSSPVLPVPLGRKKKEET
KSKKKISIWLSGIKKIEKDRNREFFHQEDLRNKEPVKFEPYPFYEVPVCL
EEISCKEQVNVRSIIGEIRRQIGGMDYVITDKKGNPIRDMPNTRGAENWV
GNKYIRAIDAIAYKKWRPATFELIKTDYEIYSSSSDSEFGDIPPPPSPSF
SDLHFLNIQSSTNSSSSSTSTTVTNSPSTNVIETSTTQVASSSTHVSSTA
MQNQSYVSNRDLLAEIERLEEINNRIESKIDQLPTLQPETLQPEVSQPEA
VVSKADVKELLTCPICTCCNFDIVYCHTCNQFAGCKDCIYRVDSCPLCRA
SFSITCDGCSNEINFRPKSITIPGLRDILEE Run BLAST on NCBI transcript from alignment at scaffold_226:212629..224151- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053169 ID=TCONS_00053169|Name=TCONS_00053169|organism=Clytia hemisphaerica|type=transcript|length=11523bp|location=Sequence derived from alignment at scaffold_226:212629..224151- (Clytia hemisphaerica)
CCTAGCATTAACTTTTTCTCCTGGCCTGGAAACTCCTTGAATCTCCTGGA
ATTTATTATATATTTTTTCAAAATATCCTGGGATGAGACCATTCAAAAGG
TACGTACGCTCAAAGTCGGTGAAAATTGACCACGCCCTCCCACCTTGTAC
GCTCTTGTACGCTTTGGCATTACCCCCCCCCCCCCCCCCCTCCCCCTTCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTGTCTTCTGAACAAAAGCGTCTCAAAAAGA
AAAATGGCGGACATGAAAAAAATCAAGAGGGGCTTCCTTGTAGTGCTTTA
TATTAGGATTGTGATTGATTGCACCGAGAAATTTTGATAATTTTTTTAAA
ACTTTACCAATTCGAGGCTGCTCTTTCCATTAAAACTAGTTTCAAAATGC
GCGGAAAAGCCTAAAGCCCTTAAAATTGAGATTAAAGTTTTATGTCTCCT
AATTAGGAGACGGGTCTCCTAATCAAGCGACCCCAAGTAAGCGACCTACA
TGTCTCCTAATCAGGAGAAGTCTCCTAATCAGGAGGCGTCTCCTAATAAG
GCGACTGTTCCTGACTGTACACCTTCAAGTGTAATTGAAGTAATTGAAAC
ACAATCGAATGCCAATCGAAAAAAATGTAAATTCAATTGATGTTCGATCA
ATTCGACAAATCAAATTCCAAATCGAATTCCATTCATTCGATTAATTTCG
ATCGACTTCGATTAATTCGGCAATCAAAGAAGTTCAATTGACTTCCCCTG
GTTATAATCTTATTTTAATATTTATTATACCGTAATCGATTGCGCTGGAT
TATTTTTTATTATTTATTAATTTTACCCAGGCTAGGGTAGGGGGCCGTCC
ACATAGTACGTACGCACTAAAGGGGGGAGGGAGAGTTTTCTCAAAAGCGT
ATGCTTGCGTACGAAGGGGAGGGGAGGGGTCAAAGCAAAATGTACGTACG
CAGAGAAATTTTTACGCTTCTTATATTTCTATTTGGTTGTGTTGCAGGAG
GCTTTAGAGACCTATTCTCGCAACTATAGACGCTTACTAATGAGCGTCCC
GTCAGCACCTTGAACTGACTACCCAATTCCCCTCACATGGCATGGGTTGA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGACCCGGGCGAAGGAACATTCACTTGCCAAGTGAACTGCCGTG
AGTGGGAATCGAACCCTGGCCGCCTGCACAGAAGCCAAGGTCGACTACCA
CTATACCACGACATATATTATACGCATCAAGGAAAAGAAAAGGTCTCTTG
ATAAACATAGAGTTTCATGTATGAAAATAAAGGTCCGAACCAAACGATTT
GAATTTGAAATTTTCTTCAACCGAGGGGGGTGTGGATGAAAAGTACGTAC
TTACCAGGGGGTATAGCCATTCGTGTACGCTTGCGTAGAAGGGGGGTATC
CGATTTTTGACATTTTAGTGCGTACGTACTATGTGGACGGCCCCTAGAGT
GTAGCTACTAAGGCAGCGAAAACACTGATGTGGGCCTGGATTCAGAAATG
GCTACCTCTGATTTTTGAATGCCCGTCCTACATCTACATGGCTAAATTAC
GCTAGACGAGATGATGTTGAGACGCGATACTTTCTCATTCACCATCCTCC
TCCAAGAACGATGACAAGATTTTGGTAGCAGCCAATGGCTCAAACCTGTA
CCATAATTCACCCTTTCTATTGTAAGGCAAGCGCCTAACCAACTGAGCTA
TACCATCTCGATTGCATTCAATTAATCAAATTCCAATCGTCAGGTGATCA
GAGGTGATTGGAAACTAAAACATCTTGCTAAGGATTCATGTGGTTGGCTG
CTAATATAGGAAGGCTAACTGTTGTTTTTGCTAAAAAGTTTCAGTTGTCA
GCGGGGGTAAAAACCAGACATTTTTCAGTGGGTCATAATCCTCATGCCTT
AAGTGGGTCTCATGTTCTTTTGGGTCCCCCAAAAAAATACGTAAAAAGGC
TACCTGTATGTGACTCTAGTTGGATTTTAAGGGATATTAGTTAGTCTATA
TTGGACATCAGAAAATAAATAACTACTTGCAAAGAAAATTTTACTGCCTT
ACTGCCTTAGTTGACAAAATTACAATGTGGTTGTTTTACCATTTGAGGTC
ATTTTTTAGTTATTTGAGGTCATTCTACCATTATATGAGCTCGTTATTTC
ACATTATACGTTTCATCAGTATTACGTTATTACGTTCTAGCATTATACGT
CTTATCGTTATATGTTTTAACATTATAAGTTGCCAGTCAAAAATAGTGTA
AACTTTTTAAAAAGCTAAAAATGATGAAAAAATACCCTAAGGGAACTTAT
TTTGGCGAGAACTGATTTTGGCGAACGGTCGATTCGAATTTTTTTTAAAA
TTTTGGCAAGAACTAATTTTGGCGAACGAGGAATTTTTTAATTTTGACGA
GAACTTATTTTGGCGAATGACCAAAATAAGTTATTTTGAGAGAACTAATT
TTGGCGAATTAAAGAAAGTCATAGAATTTAGCTTTTATATATTTAGCCGT
TAAAAGTTCTTTTTACTTGTCAAAATTGTCATGAATACGTCACAAGATGT
AAAATTATCAGTCTTTAACTTCAGCTTCATCATCAATGATGATGTCGAAA
GCGTTTCGGCTAAAGTCTATTTAATCTTCCTCTTCAAGTACCTATATTCT
TCCCCTTCTTCAAATTCGTCATCTGCTCGTGAAATCAACAGCAAAACCAA
GGGATATTTGCAGTTTTTTTGGAAACGCAGCTCCGGCAAAGAAAAGAAGA
AATGAAGAAAACCCACGTTTAAGTGGAGGAGAATTGATTACTATTGACTC
ATGACAAACACTAGATTATGGTGCTGAGAAAAGAATTGAAAAAGTGAAAT
CAACTTCAAAAATTGCAATTCTTTTATTTTCTTTAGAGGGGCTAATGTTG
ATGAACCACCAATTTTTTTAATTTTGGTGAGAACAAATTTTGGCAAACCA
TGAATTTTTTAAATTTTTGTATTTGATATTCGAAATATATATCTGTATAA
CTTGAGAAAATTCATTTCAAAGAGAGAAACATTTTTGTGGCGCACCTGGT
ACAGGGATCGAATTAGCGTATCGCATTTCGCAATTAGCGATGCGTTTTTG
GATTACTTACAAGCTAAAAATTGAAAATTGATCCATTTTAGGATGCAAAA
TCATGCTTATCAAAAAATTGCGATGCACTTTCTATCTCTTATTTCGATGC
CTGTGGTATAATGGTAAAACGACTTCATAATGGTACAACAATCTCATATA
ACTAAAAAATAACCTCATGTGATGGTAAAATAACCCCATATAATGGTAAA
ACGATGCCTTGTAATTTTGCTGACAACTTAAGGCAGTAATCATGAAGTTA
CATATTTTTTGTTTATTTGATAGTATAAAATCAATTAGCTTAAAATTATG
GTGATATTTTCTGATGATGAAATAGCTGTCATATCTCAAATGGTTAGAAG
AGGTTTCACCCATGAAGAAGTCTCACAATATTTCATAAGGCTCTATCCAG
GAATCAGGGGTTACAGTGCGAGAAGTATAAGAAGAGCTTGTAATACTCAT
CATATTACGCGGATTTCTGATATTGAACTTGATGATGTCATCAGAAATTT
GATTGTTAGGTATGGAAATATGTATGGTCGCACAATGATGCAAGGAAGTG
TAAATGCTATTCTTCAGGTTACACGAGGTGCAGTTTCACAAAGGCGAATT
GCAAGATCTCTTCAACGAGTTGACCCAGTAGCTTACGATGCAAGAAGACG
AGATGTGTTAGAAAGGACAAATCCTATCCCTTACTATGCGCCATATTTTG
GCTATAAGGTCCACATGGACCAAAATGAAAAAATAGCCCAGCGCTATGGA
TGCACCCATGTTGTACTTATTGATGGTTGTTCCAGAATGGTGTGTGGGTT
TGCATCAATGGAGGTCAAAAATCCTATACTAATTTATGAGTTTGTGTTTC
GACCTGCCATCCAACGTTATGGTCTATGGGATCAACTACGTGTGGACCAT
GGCACAGAATTTTTTCTTTGCCTCTTTATTCAAGATTTGCTGAAAAATCA
CCGTGTGAATCAACACAGGGTCCCTTGGAGGCAAACAACTTCTACTGAGA
ATTATGTTGTTGAAAGGTTCTGGCCAGAGGTCAATTCAAGAGTCAACTAT
CCATTGAAGCGAGCTCTAAACCAGTTGGCAGAAATGCACTATGATTTGAC
TGATCCTTTGAGCAAATTTTGTATTTCTTGGGTCACCCTCTTTGTTGTGA
AAGATTCTGCACAACATTTGGTGAATTCATGGAATCACCACAGAGTTCCT
GGATCTCTAGGATGTGTTCCTGTGGAAAATATGATTGAAACTCAAAACAC
GGCTCAGTTACCAGAAATTCATATACCAACAACGGCTGAAGCAGTTAGAA
TGTACCTGGAAAGAGGAGGTCAACTAAACCACAACCCAGCTTTTGGTGTC
GACCCTCTTTTGGGAACAGACCATTTATATGAATCAAGGAATGAAATGTT
TCATCAACTAAAGATGTTTTCTGCAGATCAAGTTTTCTCTGACGTATTGC
GTGGTGATTATCATAGCTTGAAATCCCTCATTGACTTGTTTGTATATTTA
ACCAGTTATTTGAATAGCTTGGATGTTCAATAAGAGTTTTTTTTTTAATT
CTATTTACTATATCAATTGATATCTAGCACTGTTGTTTGTTTCATTGTTT
TACCGCTTTGTGGTAAATTTTTTGGGTAAATAACCCAAATTCCTGATATA
ATTGAAATTTGAAATTAAAACTCTGATCTGACAGTTTAAAGTTTGTTTTG
GTGTTCTAATGAATCCCCGAAAGACTTTTCGATTCGGACCACTAGATCAG
AATATATTTCACTTTTATTTTCTCCACACGTTTATCGTTCTCAAAGTCAT
TCTTTAACCCTTTCACAGCAAAAGTCTTTTAGCACTTTTCAAAAATCTTG
ACCCCCTTCTAGTAGGGGGGAATTTGTTCGTTTTTTTGAGGTCGCTCGAC
TTTTTTAGTCAAAGCACTTGTTATACATTTTTGGAAAGCTAAGGGGTAGG
CAGGGGAATCAAAATAATTTGGGTGCCAATTTTTTTCGGACACTTTGCTG
TGATTTTCGGACAAATACGACGGTCTCAGGCAAAAATCATAGGGTGAAAA
ATTAATGAAAATTTTAGCTGGAGAAAACGGAGACCTGTTGTATATTTTTG
GAAAGCTCTCAAAAAATCAAGATTAGTGATATATTGCGAGTATAGGTGAT
ATCTTTACCTAACTCGAGATATTAATCCTTAAAAACAGTGTTTTTCAGCC
AGAAACAGCTGTTCTGTCCAGTTTTTGCGCTTTCGGAAGCTCAATATCTC
GAGTTAGGTACTGAAATCACTTATACTCGCAATATATCACTAATCTTAAT
TTTTTGAGAGCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCAAATTATTTTGATTCCCCTACCC
CTTAGCTTTCCAAAAATGTATAACAAGTGCTTTGACTAAAAAAGTCGAGC
GATTTTACAAATTTCCCCCTACTATTCTCTGGAAAAGAAATTGTTTTATT
GTGTTGCTTGTGCTCATGAGACAGGGTTGATATACATTTTTTTCAAAAGG
ATCATTAAATATTTCTGATTATTTAAAAGTTTATTTTTATTTATTTAAAA
AAGTAGGGTACTATCTATCATAGGAAAATGATGGCTGAAGTAGATTTTGT
TTTAAAAAGTTTTTGGCTTGAAAAATGAATCTTTAGCTATAAAAATCAAT
ATCTATTTATTAATCATCTATCAAAATTTTCATGCAATAAAGTAATTCTA
GCTGAAAAATTAATCATTTTTTATAAAGTTTTGTTTATGGCCAGAGCAAT
GGTGTTTCTTAAGTTAAAGAAAAAAGGTTAACGTTTTTTATTAGCAACCC
CCCTTTATAAATGGAGGCTGGCACATACCAGACACTATGGCAATATTTCT
GATGTACAATACAGTAATTTGAAAATTACTGAAATTGAGCCCAGTGCAGT
GCGCACGTTGTCAGTTAATAAACACTTATCTTCAGCTTTCATTATCGCTG
ACCTCATAAAAATGACTTTGTTAAACTAAAAAGATTATGGCAATCTATTA
AATTCTCTTTTATTTTGCATCACGTAACCACTGAGTAATTCTTATTCAAT
TAACCTACAGAATTCTTATATCTTAGGGGTCACCTAAGAAATTTGAATGC
TAAGGGTCGTTCACCTAAATTCTTAGGGGTCTCCTAAAGCCTGATTACAA
GCCATGTACTGTGATTTTTCTTTCTTTTCATTTAACCTTTCAAAGCCGTT
AACTTTTTTGAAAAAGCCCAAAAAATTCAACATTTTTTTTGGAAATTTAT
TCTTTGAAAGGCAATTTCTCGACCAGGACAAACGATTCAGGTATCAACTT
TGGTATCGTTGGAAAGCTCTTTCTCTCAGCTACAAAAAATTGCAGATTTT
TTTTCTCTGAATCTCAAGTGGTCAGGAGTTATGACCAAANAATGGACCTT
TAAAAACCCTATAAGGGTCAAAATAGACTAAATTTAGGCTTTTTTTAGAG
TAAAACGAGGAATTTTCCTTTTTGTAGCTGGGAATCTTTTCAAAAATTAA
TAAACGGGGGGGGTCCTAATAAGGTCCGGGGGGTGGAAAAAAATCGAAAA
ATTAACAAGCGGGGGGCCTGTTTATTTGGCACCTAAGAGTACTGTGATTT
TTCTTTCATTTAAAAAAAGAATATTGCAATGCAAAATCTCTTTGTTTTGT
TATAAAGAAGTCACTGTATTGCTACACTGGGCAGGGCAGGGTGATAGAGA
AAGTAGGTGGCAAGAATGTCCCCCCGATGTAGAGTGCAAAAGTGTTAATA
GTGCAATTAACGATTAATCACACTCCTCTAAACCTATCAGATTTGAGTAA
TTTTGCACAACTGACGATTACATAGTTTTATACTCTTTCCAAGATTTTGA
TTCCTAAAAGTTTGCATTTATTTAACTGATTTCTTTCTTTCCATTTTTAG
CTAAGAAAATATGGAATTAGTTACCATAATCCATAATAATCGTCCACTTC
AACTTCCAAGACTCTTTTTAAGAGCAGATGATCTTGCTGCATGTTTTGCT
GTTGATCGGGAAGGACTACACTTAAAGTGTATAACTAACAATGGGGAAAT
TAAAAACTTTATTCCTCTTTCTGATGGAAAGTTTGAACTTGATCCCACCA
TCAACAAATACAACCTGGTTGCAGTAAATAATGATACTCACAGACTCATT
AATAACGACAGTAGCAGTAGTAGCAGAACTCCAAATGTTAGGTATGGCCA
TGGTTCAATGAACAATGAAAACAACGAAATGAGAACTCCTACCATTGCAT
ATGGTCGGAGAGGCAATGCTGGTCTGAGAGCTGTGCCGGGTTTTAAACGA
AAGTCAAACTCATCTCCTGTTTTACCCGTTCCTCTTGGGAGGAAAAAAAA
AGAAGAAACAAAATCGAAAAAGAAAATTTCGATTTGGTTGAGTGGAATAA
AAAAGATTGAAAAGGACCGTAATCGTGAATTTTTTCATCAAGAAGACTTA
CGTAACAAGGAACCTGTTAAATTTGAACCCTACCCTTTCTATGAAGTTCC
GGTTTGTTTGGAAGAAATAAGTTGCAAGGAACAGGTCAATGTAAGATCCA
TAATTGGAGAAATAAGACGACAAATAGGAGGCATGGATTATGTGATAACT
GATAAAAAAGGCAACCCAATAAGGGATATGCCAAACACAAGGGGTAAGTT
TGGGCTAAATCAGGCTAAATGACTTTGGAAAATTTAAGCAGTAATACAAT
TTTTGGGTCTCATCAACCCCTTATACACTAAAATATTTTTTTGCCTGGCT
TTGTACTGTTTTTTTTTTTGTAACTAAATTTCAACTCTAGTCACCAAGCC
TGTTCCTTTAATTACATTCCAGCCTTTTCTCAATTTTTTACTACTATATA
GGGCTACTTGCATTACAACAATATATTATTGGCCCAATATATTGCTGTAG
TTTAAGTTGCCCTTAACAGGGCTTTTCCTTTCATTCAACCAAAAGTATTG
GACCTTAATGATGGACAAATACTTTTGTGTCTCCTTTTCTTGGGAAATAT
TGGGTAATAATCAACTTTTTGGGGTTAATTCTCAAAATTGCATCAATAAA
AGTTATTTCTGACCAACCATCCTCCAAACAAAACCTAAGCAAACCAACAT
TTTTAAGTCCTTATATTTATGGGATTTATTTCAGCGTTTTTCTCTTCTCT
CTATTTTCAATTGTTTTTGACTGTCTTTATAAGGTATGTCCAATCAACTA
CTACTTTTGTAGCAAGAAAATGTTGTGGTTTTTGGAGCTCGACCGCAAAA
CCGTGAAATTTTCATGCAGTAAAAAAAGAACAATCCTACCTGCCCCTACA
GCAAAAATTGTCAATTTGGGCTGAATTCATTATAATTTTCACATTATGTT
TTATCTAGGTGCTGAAAATTGGGTTGGAAATAAATACATAAGAGCAATCG
ATGCAATCGCATACAAGAAATGGCGACCAGCAACATTTGAGCTCATCAAA
ACAGATTATGAAATATATTCTTCAAGCTCAGATTCAGAGTTCGGAGACAT
TCCACCCCCACCATCGCCTTCATTTTCTGACCTTCACTTTTTGAACATCC
AATCAAGCACTAACTCAAGTTCGAGCTCCACTAGCACTACAGTAACCAAC
TCACCATCCACCAATGTAATTGAAACTTCAACAACTCAAGTTGCTTCTTC
GTCAACACATGTCTCTTCTACAGCGATGCAAAATCAATCATATGTTTCAA
ACAGAGACTTACTGGCTGAGATTGAACGCTTAGAAGAAATTAACAACAGA
ATTGAAAGCAAAATAGACCAGTTGCCAACCTTGCAACCAGAAACCTTGCA
ACCTGAAGTCTCACAACCAGAAGCAGTTGTTTCCAAAGCAGATGTTAAGG
AATTGCTCACTTGTCCCATATGCACTTGTTGCAATTTCGACATTGTATAT
TGTCATACCTGTAATCAGTTTGCAGGCTGCAAAGATTGTATTTATCGCGT
CGATTCGTGCCCGCTTTGCCGGGCTAGTTTTTCCATCACTTGTGATGGAT
GTTCCAATGAAATCAATTTCCGCCCAAAATCGATCACGATTCCCGGATTA
CGCGATATTCTGGAAGAATAGTCTTAGAATGCGCTCTATTTTGAAAGTAC
ATTTTGAGATTTATTTTTAAGAAGAAAGATTGCCATATTTAGATATTTTA
CGTTTTACTTTAGCTAGCAGACGTTTAAATTTGAAAAACATCTAAAGGCT
ATTGTCAGTCGTCCAGGTTTTAAGCATTTTTATGCACGGCTAAAAGGGTA
CAAAACTACGTTTGAAGATTTTTATATTTAATACATTCATTTTATGTTTT
TAAAAAGAAAAAGATTTTGTTGTGAAGACTTTGTTATAATTTTTATTTCA
GAACTTTTACTCATATTATTTTATTATTTACTTGTATTCATTATTGATCC
ACTTTAAGCTAAGGGGACACGGAAACAAATCTTCTAGCGATTGCAACAAT
AAAAATTTTTGTTGCAATCGCATGGATATGTTTCATTGTGTTCCCACATC
AGATATCGCTATTTTGCAACATTTTCCGCTAGATGTTTTTGTTGCAGCAA
CAAAATTTTCATGTTGCAATTGAGAATTATACCCTCGTGTCCCCTCACCT
TGAGAAGATTTTTTGCAACATTTTTTTATTTTACCCAATCAAAGTCGTTT
ATACAACTCAAAACAAATTATGACATAATCTTCCCATTTTTAACACGCAA
GACATGAGTTCAAAATGGTGGAGTTGCTTTGTTTTCATTTTTATGATTTT
ATTTCGTGTGCTAGGCCTATACGACACGGTGTAAAATTTTATTGCGATTG
CGACAATTTGTTTTTGTTGCAATTGCACAAAAAAAATTTCCGTGTCCCCT
TAGGTTTAAGGTATTTTTTTTTAAAGACACTTAGGGTTTTAACTGTGCTA
TTGATATTGTATTTGCACACAAATTACCTTTTACAGTTCAGTCATATAAA
AAATATATCTGCTTTTACCACTGTGTACGAGAACCTATTTTGTTCCGTTA
GTCCCTACAGTATTAGCCACTACATTATAATTCTTAGTCTTGTCAAGAGT
TAATTCTTAATGTGAGCAAAGCTTTTCAGGTTACTAAAATTTGACGTCTG
AGCTGGTCTGAGCGTCTCTTTTTTATAAAAAAAACACTTTGTTTCCGACG
AGTTTCACCCCTAACGTTTTAGGAGTTTTTATTATGTGTAGAGTTTTAAT
CTCTTTTGATATTTATTGATTCATTGATCACAAGTTTATTATTTGTGTAG
ACTTTTATCTCTTTTGATATTTATTGATTTATTGATCACAAGTTTATATT
ATTTGTGTAGAGTTTTAATCTCTTTTGATATTTATTGATTTTTTATAAGA
AATATACGTATTATTTATTTTGTAAAAGTTTAGGCTATTTTTATGTTGGA
GTATCTGACATATTATACATCAAAAGTTCCCAAATCTTACGTAGAATAGG
AATTTCCATGCTTAGCAAGGTCAAAATCGTATGGAATGGGCCAAATTTGG
GCCCAGAAAGCCAAAAAAGGCCTAAAATTATTATCCCCTCCCTGTACAAG
TCGAATTTTGAAAGTCTGAAACCATGCCATTTTCTGATAGTACTCATTAA
CATTTCGTGAAACCTTCCAGAAGGTGCTGACGTCAGCAACGAAATGAGCA
TTTTTGGACCTAAAATCATCCAAAACTTGGTTCCAGGTGATCAAAACCTA
ACAAATGACCCCATTTTTTCATCAGCTTTTCGATTTGAATCTGATGATAA
CATCAAAACCCGATTTTCAGACTTTCGAAATTCGACTTGATAATCGTGTT
TAGGCCTTCTAGACTCAAATTCTTTTTTCTTGCTTGAGCCTTATTCTCAG
CTCATGGACTAGTAGGGATTTTTCAGATTTCTTTTTTCCCTTTAGCTCGA
GTATGGCATTATTAGTTTTTCTTATTTTACTTCTGATTAGGCTAGTTATC
TTATGTTTTACTTCGTATTTTAT Coding sequence (CDS) from alignment at scaffold_226:212629..224151- >TCONS_00053169 ID=TCONS_00053169|Name=TCONS_00053169|organism=Clytia hemisphaerica|type=CDS|length=2892bp|location=Sequence derived from alignment at scaffold_226:212629..224151- (Clytia hemisphaerica)
GTGCTGAAAATTGGGTTGGAAATAAATACATAAGAGCAATCGATGCAATC
GCATACAAGAAATGGCGACCAGCAACATTTGAGCTCATCAAAACAGATTA
TGAAATATATTCTTCAAGCTCAGATTCAGAGTTCGGAGACATTCCACCCC
CACCATCGCCTTCATTTTCTGACCTTCACTTTTTGAACATCCAATCAAGC
ACTAACTCAAGTTCGAGCTCCACTAGCACTACAGTAACCAACTCACCATC
CACCAATGTAATTGAAACTTCAACAACTCAAGTTGCTTCTTCGTCAACAC
ATGTCTCTTCTACAGCGATGCAAAATCAATCATATGTTTCAAACAGAGAC
TTACTGGCTGAGATTGAACGCTTAGAAGAAATTAACAACAGAATTGAAAG
CAAAATAGACCAGTTGCCAACCTTGCAACCAGAAACCTTGCAACCTGAAG
TCTCACAACCAGAAGCAGTTGTTTCCAAAGCAGATGTTAAGGAATTGCTC
ACTTGTCCCATATGCACTTGTTGCAATTTCGACATTGTATATTGTCATAC
CTGTAATCAGTTTGCAGGCTGCAAAGATTGTATTTATCGCGTCGATTCGT
GCCCGCTTTGCCGGGCTAGTTTTTCCATCACTTGTGATGGATGTTCCAAT
GAAATCAATTTCCGCCCAAAATCGATCACGATTCCCGGATTACGCGATAT
TCTGGAAGAATAGATGGAATTAGTTACCATAATCCATAATAATCGTCCAC
TTCAACTTCCAAGACTCTTTTTAAGAGCAGATGATCTTGCTGCATGTTTT
GCTGTTGATCGGGAAGGACTACACTTAAAGTGTATAACTAACAATGGGGA
AATTAAAAACTTTATTCCTCTTTCTGATGGAAAGTTTGAACTTGATCCCA
CCATCAACAAATACAACCTGGTTGCAGTAAATAATGATACTCACAGACTC
ATTAATAACGACAGTAGCAGTAGTAGCAGAACTCCAAATGTTAGGTATGG
CCATGGTTCAATGAACAATGAAAACAACGAAATGAGAACTCCTACCATTG
CATATGGTCGGAGAGGCAATGCTGGTCTGAGAGCTGTGCCGGGTTTTAAA
CGAAAGTCAAACTCATCTCCTGTTTTACCCGTTCCTCTTGGGAGGAAAAA
AAAAGAAGAAACAAAATCGAAAAAGAAAATTTCGATTTGGTTGAGTGGAA
TAAAAAAGATTGAAAAGGACCGTAATCGTGAATTTTTTCATCAAGAAGAC
TTACGTAACAAGGAACCTGTTAAATTTGAACCCTACCCTTTCTATGAAGT
TCCGGTTTGTTTGGAAGAAATAAGTTGCAAGGAACAGGTCAATGTAAGAT
CCATAATTGGAGAAATAAGACGACAAATAGGAGGCATGGATTATGTGATA
ACTGATAAAAAAGGCAACCCAATAAGGGATATGCCAAACACAAGGGGTGC
TGAAAATTGGGTTGGAAATAAATACATAAGAGCAATCGATGCAATCGCAT
ACAAGAAATGGCGACCAGCAACATTTGAGCTCATCAAAACAGATTATGAA
ATATATTCTTCAAGCTCAGATTCAGAGTTCGGAGACATTCCACCCCCACC
ATCGCCTTCATTTTCTGACCTTCACTTTTTGAACATCCAATCAAGCACTA
ACTCAAGTTCGAGCTCCACTAGCACTACAGTAACCAACTCACCATCCACC
AATGTAATTGAAACTTCAACAACTCAAGTTGCTTCTTCGTCAACACATGT
CTCTTCTACAGCGATGCAAAATCAATCATATGTTTCAAACAGAGACTTAC
TGGCTGAGATTGAACGCTTAGAAGAAATTAACAACAGAATTGAAAGCAAA
ATAGACCAGTTGCCAACCTTGCAACCAGAAACCTTGCAACCTGAAGTCTC
ACAACCAGAAGCAGTTGTTTCCAAAGCAGATGTTAAGGAATTGCTCACTT
GTCCCATATGCACTTGTTGCAATTTCGACATTGTATATTGTCATACCTGT
AATCAGTTTGCAGGCTGCAAAGATTGTATTTATCGCGTCGATTCGTGCCC
GCTTTGCCGGGCTAGTTTTTCCATCACTTGTGATGGATGTTCCAATGAAA
TCAATTTCCGCCCAAAATCGATCACGATTCCCGGATTACGCGATATTCTG
GAAGAATAGATGGAATTAGTTACCATAATCCATAATAATCGTCCACTTCA
ACTTCCAAGACTCTTTTTAAGAGCAGATGATCTTGCTGCATGTTTTGCTG
TTGATCGGGAAGGACTACACTTAAAGTGTATAACTAACAATGGGGAAATT
AAAAACTTTATTCCTCTTTCTGATGGAAAGTTTGAACTTGATCCCACCAT
CAACAAATACAACCTGGTTGCAGTAAATAATGATACTCACAGACTCATTA
ATAACGACAGTAGCAGTAGTAGCAGAACTCCAAATGTTAGGTATGGCCAT
GGTTCAATGAACAATGAAAACAACGAAATGAGAACTCCTACCATTGCATA
TGGTCGGAGAGGCAATGCTGGTCTGAGAGCTGTGCCGGGTTTTAAACGAA
AGTCAAACTCATCTCCTGTTTTACCCGTTCCTCTTGGGAGGAAAAAAAAA
GAAGAAACAAAATCGAAAAAGAAAATTTCGATTTGGTTGAGTGGAATAAA
AAAGATTGAAAAGGACCGTAATCGTGAATTTTTTCATCAAGAAGACTTAC
GTAACAAGGAACCTGTTAAATTTGAACCCTACCCTTTCTATGAAGTTCCG
GTTTGTTTGGAAGAAATAAGTTGCAAGGAACAGGTCAATGTAAGATCCAT
AATTGGAGAAATAAGACGACAAATAGGAGGCATGGATTATGTGATAACTG
ATAAAAAAGGCAACCCAATAAGGGATATGCCAAACACAAGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053169-exon-scaffold_226-1575043694:224053..224151 | TCONS_00053169-exon-scaffold_226-1575043694:224053..224151 | Clytia hemisphaerica | exon |
| TCONS_00053169-exon-scaffold_226-1575043694:215959..216701 | TCONS_00053169-exon-scaffold_226-1575043694:215959..216701 | Clytia hemisphaerica | exon |
| TCONS_00053169-exon-scaffold_226-1575043694:212629..215243 | TCONS_00053169-exon-scaffold_226-1575043694:212629..215243 | Clytia hemisphaerica | exon |
| TCONS_00053169-exon-scaffold_226-1510915933:224053..224151 | TCONS_00053169-exon-scaffold_226-1510915933:224053..224151 | Clytia hemisphaerica | exon |
| TCONS_00053169-exon-scaffold_226-1510915933:215959..216701 | TCONS_00053169-exon-scaffold_226-1510915933:215959..216701 | Clytia hemisphaerica | exon |
| TCONS_00053169-exon-scaffold_226-1510915933:212629..215243 | TCONS_00053169-exon-scaffold_226-1510915933:212629..215243 | Clytia hemisphaerica | exon |
| TCONS_00053169-exon-scaffold_226-1491911889:224053..224151 | TCONS_00053169-exon-scaffold_226-1491911889:224053..224151 | Clytia hemisphaerica | exon |
| TCONS_00053169-exon-scaffold_226-1491911889:215959..216701 | TCONS_00053169-exon-scaffold_226-1491911889:215959..216701 | Clytia hemisphaerica | exon |
| TCONS_00053169-exon-scaffold_226-1491911889:212629..215243 | TCONS_00053169-exon-scaffold_226-1491911889:212629..215243 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_226 | supercontig | scaffold_226:212629..224151 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001841 | Znf_RING |
Blast
The following BLAST results are available for this feature:
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