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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053221 ID=TCONS_00053221|Name=TCONS_00053221|organism=Clytia hemisphaerica|type=transcript|length=157bp
CACAAGTCAGGACAATGAAGAAATTCATTTTAGTATTATGTATGATACTT
CCATATGCTTTGTGCTTTGATGCAGGAGATACATACATCGATTGCgtcaa
aacaacacaaaatcCCGCTTCATGCTCTGCATATGAAGACGTTGGAAAGA
ATTATCG Run BLAST on NCBI transcript from alignment at scaffold_227:350842..351891+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053221 ID=TCONS_00053221|Name=TCONS_00053221|organism=Clytia hemisphaerica|type=transcript|length=1050bp|location=Sequence derived from alignment at scaffold_227:350842..351891+ (Clytia hemisphaerica)
CACAAGTCAGGACAATGAAGAAATTCATTTTAGTATTATGTATGATACTT
CCATATGCTTTGTGCTTTGATGCAGGTAATACTTTTATTAAAATAACATG
CCCCTTAATTAGTATTCTCACACACACGAACACTTTCGCTTATGTGCTAG
CCTTGGCGACCGATACAATGACGTACCGTCGGAGTTTgaataatagcgag
tttatgtatttacgCTTTTGAGGACGCTGGGGGTCGGctgagtgactgaa
gcgatttggaataacccgcagttctgcccctcaaaatcgaggacggtaca
agtgctgatttaccgtcatcCTCAGATGGTCAGGATCTAGagaaattaga
accttaccgtctccgtcgcaggaaaacacacatacataaactcgataATA
GACTAAGAAAGACTGTAAGAAGCCACTACTTTtagacatccctgtctcac
agccgcGGTAAAAACTTTTCCCACAGCAAGGATAAAGTTTTCCATCGTTA
TCCCAATGGGAgtcaaaattttattgttcctgAGTCGAAAAATCGGGTGG
GAATGGtcttgaagtgcaattttttacattgaattttgaatgggaatgaa
atcaaagtgaattccccagtggggatgaaaatgtAGGGTATTCGCCCCAC
CGGGGACGAGATTTTGGCCGAATTGCTCAATGGGGCTGGGGTCttagcgg
gtctgtgacacaggggtgacCCTAGTTTAGTATTCTCCACAAACACAACC
ACTTTCATCTATGTGACCTTGGCGGTCGACAATGACGTACCGCCAGAGTT
TGAATAATAGACAAAGAAAGACCGTTAGAATCcactactttcagcaaaga
ttttCACAAATAGTCAACAAATAGTCGACTTTTGAAATGTAGTAAATTTT
GATCCTGTAGCAGCACATTCTGTGCCCTCAACGTTTCTTTCAAACCCAAA
TCTACACTTTGTTTTCAGGAGATACATACATCGATTGCgtcaaaacaaca
caaaatcCCGCTTCATGCTCTGCATATGAAGACGTTGGAAAGAATTATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053221-exon-scaffold_227-1491911889:350842..350916 | TCONS_00053221-exon-scaffold_227-1491911889:350842..350916 | Clytia hemisphaerica | exon |
| TCONS_00053221-exon-scaffold_227-1510915933:350842..350916 | TCONS_00053221-exon-scaffold_227-1510915933:350842..350916 | Clytia hemisphaerica | exon |
| TCONS_00053221-exon-scaffold_227-1575043694:350842..350916 | TCONS_00053221-exon-scaffold_227-1575043694:350842..350916 | Clytia hemisphaerica | exon |
| TCONS_00053221-exon-scaffold_227-1491911889:351810..351891 | TCONS_00053221-exon-scaffold_227-1491911889:351810..351891 | Clytia hemisphaerica | exon |
| TCONS_00053221-exon-scaffold_227-1510915933:351810..351891 | TCONS_00053221-exon-scaffold_227-1510915933:351810..351891 | Clytia hemisphaerica | exon |
| TCONS_00053221-exon-scaffold_227-1575043694:351810..351891 | TCONS_00053221-exon-scaffold_227-1575043694:351810..351891 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_227 | supercontig | scaffold_227:350842..351891 + |
Blast
The following BLAST results are available for this feature:
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