TCONS_00053661 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053661
Unique NameTCONS_00053661
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2184

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053661 ID=TCONS_00053661|Name=TCONS_00053661|organism=Clytia hemisphaerica|type=transcript|length=2184bp
TTGTTACGTATGGGACAAATTTCTCCAACTGGCTTCAAATGGTGGGCATT
ATCTCCAAAACCAGAAATACTTGAGGTGGCAcacatttcaaatttcaaac
aaagATACCTAAGTAAcagttttgaataaaaataatcatttttgaagaaa
ctttgattttcactttttttggaatattttttgggcaaaattcTTGCAAA
CAACCCACGtaatgacagaaagtatgattgataaactcggtgaagttatc
aaaacaaattagttgtcaaagagatttaacagtaagtgaaaatacaggcc
agatatcaacattCCCacgtttcgaccaatcgtcccaagttagagcagtt
gggggtataattataaataatattaaatatattaatttcattataataga
tttaactgaaaaaacaaaaatgaatctTCGTTGTACACAACCTGAAGATC
TGATAAATATGCAACATTGTAACTTACTTTGTTTGCCAGAGAATTATCAG
ATGAAATACTATTTGTATCATGGTTTATCATGGCCACAATTAAGCTATGT
TGCTGAAgatcaaaataaaaaggTTGTTGGTTATGTTTTGGCAAAGATGG
AGGAAGAACCAGATGATGATATTCATGGTCATATCACATCTCTCGCTGTT
AAAAGGTCACATAGAAGATTAGGACTAGCCCGTAAACTGATGGACCAAGC
TGCAAGAGCAATGGTTGAGAATTTCAAAGCTAAATATGTATCACTTCATG
TGCGAGTTAGCAATCGTGCAGCACTCAACTTGTACGAGAAAACCTTGAAA
TTTGATAAGAGTGAAGTAGAGCCGAAATATTATGCTGATGGAGAAGACGC
CTTTGCTATGAAACGTGATCTGGCTGGTTTCAGTATGACCGAGCGATCCG
AATACGATGATAGTGTTGACGAATCGTGTTTAGAAATCGATTGCAATAAC
CGAGGAACGGAGGAAGCGATGAAAAATTTATCGATTAATGCCGAAGAAGA
AGAGAACAACGAGTCAAACGATAAATGTCCGACTAAATCGAATTGAATCG
ATTATTTCCTCGATTGATTCTATAATTGCGAAATGATGACTGGATGACAG
CCTGATAACGAACTTAGTggcaaacaaacaaacagacaaACAAATAGAAT
AAACAATTGGAATCACTCAAACAGTTGTTGTGAACAGCCAGGAGCTAAGC
tccaatttaagaacatattAAATGCTATTAAATATGAAACAAGCGTAACA
ATTCACGGATATTGACGTAATGCTTTATAGACGGGAACACTGAATATAGC
CGGGGCGTTTGCCAATagtttttattgtttaaattcaatatTAACGTCAA
ACACCCGGTCttttttttgggtgcttccgtataaaacattacgtcatgaa
tattacGAATCCGACTTACTTGAACTATAGTGGTCAATACAACACAGAAG
TATACCGAAGATGCTTGATCGATGAAATTAACAGTATAAATAATTTTGAC
CCTCTCATGGTTCAAGTGTTGGTAAATCATCTCTAAACTGGATGATATTA
ATATGAATTGACCGAATGATGATGGAAAACTTTCGATACTTGTTGTTAAG
AGTATTTTTTGGAGGTGTTTTATTTAAAATATCTATCTGTGTactaaaag
caaaagaaaaggGAGTGTGGAAAATTGGCCAATAATATATCTTTCGACCA
ACAATTCTTTCTTTTGACCTTCAAGCTTAAATAATTTTTAAGATGATAAG
ACTCATTTGACTTTGTCGAACGTCCGCCTTGATTTAAGTTAAAACGGGAC
TAAAGATTACATGAATATTGACCACTCCCTTTGTTTTAATAGGAATTCTG
AAAGTTACATCTTCTGATTAGACTTCAAGTGGCCCGCAAACCACCTGTTT
CAAAACGAGGTAGGAGTTGCACTctaaataatttataaaaatgcAGCCGA
GATATGAAAGGGTCTGATATTATGAGCTGGTTTTTAGTCATCGATGGTCA
CTAGGTCTCAAATAAGACTTTGCCGCGATAACTAAAGCAATTTACACCTT
AAAAACTTGATACTCCAAATTATGATAAgatattttttctgaatttcata
gattttttatttctttacttACTTTAGATagtttatgttttgaaaatgaa
aaatttataccTCAAAAAATAAAGTCTGGTTGAA
Run BLAST on NCBI

protein sequence of TCONS_00053661-protein

>TCONS_00053661-protein ID=TCONS_00053661-protein|Name=TCONS_00053661-protein|organism=Clytia hemisphaerica|type=polypeptide|length=208bp
MNLRCTQPEDLINMQHCNLLCLPENYQMKYYLYHGLSWPQLSYVAEDQNK
KVVGYVLAKMEEEPDDDIHGHITSLAVKRSHRRLGLARKLMDQAARAMVE
NFKAKYVSLHVRVSNRAALNLYEKTLKFDKSEVEPKYYADGEDAFAMKRD
LAGFSMTERSEYDDSVDESCLEIDCNNRGTEEAMKNLSINAEEEENNESN
DKCPTKSN
Run BLAST on NCBI

transcript from alignment at scaffold_233:452020..457710-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053661 ID=TCONS_00053661|Name=TCONS_00053661|organism=Clytia hemisphaerica|type=transcript|length=5691bp|location=Sequence derived from alignment at scaffold_233:452020..457710- (Clytia hemisphaerica)
TTGTTACGTATGGGACAAATTTCTCCAACTGGCTTCAAATGGTGGGCATT
ATCTCCAAAACCAGAAATACTTGAGGTGGCACACATTTCAAATTTCAAAC
AAAGATACCTAAGTAACAGTTTTGAATAAAAATAATCATTTTTGAAGAAA
CTTTGATTTTCACTTTTTTTGGAATATTTTTTGGGCAAAATTCTTGCAAA
CAACCCACGTAATGACAGAAAGTATGATTGATAAACTCGGTGAAGTTATC
AAAACAAATTAGTTGTCAAAGAGATTTAACAGTAAGTGAAAATACAGGCC
AGATATCAACATTCCCACGTTTCGACCAATCGTCCCAAGTTAGAGCAGTT
GGGGGTATAATTATAAATAATATTAAATATATTAATTTCATTATAATAGA
TTTAACTGAAAAAACAAAAATGAATCTTCGTTGTACACAACCTGAAGATC
TGATAAATATGCAACATTGTAACTTACTTTGTTTGCCAGAGAATTATCAG
ATGAAATACTATTTGTATCATGGTTTATCATGGCCACAATTAAGCTATGT
TGCTGAAGATCAAAATAAAAAGGTTAGTCTTTAATTACTTTGAATTTCAA
AAATTTCTTATAAGGCTGAAAATTCCTACATTCTCATATTGAAAGAGTGT
CTTTAAGAGTTTAGCTGTATTCATTGTTTAAGCATTATTATATTTCTTTT
TCTGAGAAGCTTAGGGATCATATTTCACAATAAAGTTTTGTACTATTTAT
ATATACTTTGCTGGTGTATGACCAAATTAAAAATGAGAGACTTTGAAAAG
AGTTGATAAGAGTTTTGATATCAAAATGTGTTTCTCATTAAATTTTTCTG
TTAAGATTTTTTTCTTTTTCTCTTTCAGGTTGTTGGTTATGTTTTGGCAA
AGATGGAGGAAGAACCAGATGATGATATTCATGGTCATATCACATCTCTC
GCTGTTAAAAGGTCACATAGAAGATTAGGTATGTCTATACATCTCTCGCT
GTCAAAAGGTCTCTCAGATAAGATAGGATAGGTCATAAAGGTCTTGTAAT
TGTACTAGATGCATCCTTTTGGTGAAGTAAACATCACTTACTGGGAAGAA
AGTCTCATAGAATATCTGATAGGTCATTAAGTCTCATATAAGATTAGTCA
GTCACTTGCTGTGAAAAGTTGCACATAGAAGATAAGGTATGTCGTATCAC
ATCACTCGTCATGGAAAGGTTTTATTAAAGATTCGGGCCATTCTTATATT
ATTTTACCGTAAAAAGGTTTCTCAAAGAGACCTTTGCAGAACTAGACCTT
ACTCATCAATTGCCATGAAAAGGTCTCTTACAGAAGGTTATGTAGGGTAT
GTCACTTCTCTAGATGTGAAAAGGTACAATAGAAAATTATATAGGACAAA
TCAAAGTAATAAGACTTGAATTGAATATATTTTCGCTGCAACGCAGCAGG
ATAACCCTCTACAAAAATAAAGTAGATTACTCTAATACAAATGGGGGGGG
TTCATGGTTGGCGGAGGAGCGGAATCGGCCCTTTTTTCGGACGGAGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTTTTTTTTTGGGGGGGGCCTGTGTACTTGAGGGGA
GTTAAAATCTAATCACTTAGCGTGGGGACTGAAATAATTCAGCTTAAAAG
TTGGCATCAATTATTTGGCATCAATTACTTGAATTGAAGCTCATGAATCT
GAAAAATTTTCCACTGTGGCGCAATATTTTTATAGAAAGTGTGCAAAATA
TTTTATCTTAAACTTAGAACTGAACGCAATTTACATTGGTAAACCCTTTT
TTACTGGATCAATTTTTTGAAAGTGTCTAGGGTCAAAAGTCCTGGGGGCC
AACAAAAAATTCATAAATCTTTGGGGGGACTTAAAACTCAAAGGGGGCCT
AATTTTTGCCTGGGACCTAAACCCAGGCTGACGCTATGGTAGGGAAAGTA
GGTTTCTCAATCGAAAGGGCTATAGTAGTGGTGTGAATAACATTTTGTGT
TTTTAATGCTAACTCTTGCTCCTTTCCTTATTTCAGGACTAGCCCGTAAA
CTGATGGACCAAGCTGCAAGAGCAATGGTTGAGAATTTCAAAGCTAAATA
TGTATCACTTCATGTGCGAGTTAGCAATCGTGCAGCACTCAACTTGTGAG
TTTGATTAGTAACATAAAATAATTTTGAAAATACCAGTCTTTTTCATCTA
AGGTACCTTCAGCTCATCTTATTCAATTTCTTACATCAATTGGGCTCTTC
CAGAAAAAAATTTTACATGGGAGGTGGAGGATATAACAATTTTAATTACC
CCCGGACAGAGCAAATTTACACCCCGGACAAGGCAAATTTTGATGATTTT
TTGCTACCCCCCGGACAATATATCCTCCACCCATCATGTAAAATTTTTTT
CTGGAAGAGCCCATTACACTTTTCTGTCTTGTTGAGGTAATAAATAATGA
TGGTTTTTCTTTTTTAATTTTCTAGAGATAGAAATGGGCTATTGAGGGGT
GTGATGTCCAAGGTGATCTCAAAAATAAAAATCCTGGTCTGGTTTTCGAG
TGTAACATCCAGGGTGGTCAGTAAAATGGGGTCAAAGATCCAGGGTGGTC
CAAAAAAAATCCTAGGGGTCACCTTTCCCAAAAAAGACCTCAACATAAGG
GGTAAGATTCTTTTCTGGAATGTTACATTTATAACACCTATACATATGTA
CAATAATTATATAATTTGTAATTTTATCTCATTAGGTACGAGAAAACCTT
GAAATTTGATAAGAGTGAAGTAGAGCCGAAATATTATGCTGATGGAGAAG
ACGCCTTTGCTATGAAACGTGATCTGGCTGGTAAGTCATCATCTTTAAAG
GGTTACTTACACTACAAATCAGGGGTTTTTCTTTGTTTTTGGTAGGCTGG
CGAATGAAAAATTAACTCTGGTGATTTCTAAATTCTAGGCCGGCGAATTC
TTAGCAAACGTAGTGTATTAATTAGCGTAAATATGTACTTGAGGCGACGA
ACCGAACTTTTTAAATGGCGAATTGTAATTTTTATCGTGCCTTGGACCGG
CAAAATTCGCCGTTTGCCGGGCCTATATAAGACTCCTGCAAATTATATTG
ACGAACAACATTCGACATTGGAGACGCTTTCATAGGAAATCAGTTAGCAA
TTAGTAGCCTATCCTGTCTGTAAAAATGTGATATCTGTGCTTATGAGTAA
ACATTGCAATGGTTCCAAAAACCTTGTTCCAAACGTACTATTCTCTTTTT
AATGTTTTCTGATGGGTGCTAGATATTTTCTTGCATCCATCAGTTACATA
ATAAAACCTGGGACACACAGGGTTAGGCATAGATGATTAACAGGATGGAT
ATTCTTTTTAGCTACTTATTCAGTTTAACCGCGAAAACCCAATAAATACT
GAGTAATTTATAGAAATTGAGTTTATTAAGTCTGCTTTTTTATGCATTGT
ATGCAAAGAGTGTTTCAACCAAACATTCAATTTTTACTCCAGACGTCATA
TAAATATTTACATGATCCTCAGCAAGCCGCTTGAAGGGAGGGGGCCAAAA
CTCTTGTAATTGGCGAGGAAGAAGATTTTTATTTTCTAAACACCATGAAA
CATTTAATTAGATAAGAACAGGTTTTTGACTTTATAAAAATTGCCCCCGC
CCCGTTGATGGGCTTATGGTTTTACATTTACTTTCTTGGCAACAATTTTT
CCTGTTTGCTTACTTTTCTTCTTCTTTATGTAGGTTTCAGTATGACCGAG
CGATCCGAATACGATGATAGTGTTGACGAATCGTGTTTAGAAATCGATTG
CAATAACCGAGGAACGGAGGAAGCGATGAAAAATTTATCGATTAATGCCG
AAGAAGAAGAGAACAACGAGTCAAACGATAAATGTCCGACTAAATCGAAT
TGAATCGATTATTTCCTCGATTGATTCTATAATTGCGAAATGATGACTGG
ATGACAGCCTGATAACGAACTTAGTGGCAAACAAACAAACAGACAAACAA
ATAGAATAAACAATTGGAATCACTCAAACAGTTGTTGTGAACAGCCAGGA
GCTAAGCTCCAATTTAAGAACATATTAAATGCTATTAAATATGAAACAAG
CGTAACAATTCACGGATATTGACGTAATGCTTTATAGACGGGAACACTGA
ATATAGCCGGGGCGTTTGCCAATAGTTTTTATTGTTTAAATTCAATATTA
ACGTCAAACACCCGGTCTTTTTTTTGGGTGCTTCCGTATAAAACATTACG
TCATGAATATTACGAATCCGACTTACTTGAACTATAGTGGTCAATACAAC
ACAGAAGTATACCGAAGATGCTTGATCGATGAAATTAACAGTATAAATAA
TTTTGACCCTCTCATGGTTCAAGTGTTGGTAAATCATCTCTAAACTGGAT
GATATTAATATGAATTGACCGAATGATGATGGAAAACTTTCGATACTTGT
TGTTAAGAGTATTTTTTGGAGGTGTTTTATTTAAAATATCTATCTGTGTA
CTAAAAGCAAAAGAAAAGGGAGTGTGGAAAATTGGCCAATAATATATCTT
TCGACCAACAATTCTTTCTTTTGACCTTCAAGCTTAAATAATTTTTAAGA
TGATAAGACTCATTTGACTTTGTCGAACGTCCGCCTTGATTTAAGTTAAA
ACGGGACTAAAGATTACATGAATATTGACCACTCCCTTTGTTTTAATAGG
AATTCTGAAAGTTACATCTTCTGATTAGACTTCAAGTGGCCCGCAAACCA
CCTGTTTCAAAACGAGGTAGGAGTTGCACTCTAAATAATTTATAAAAATG
CAGCCGAGATATGAAAGGGTCTGATATTATGAGCTGGTTTTTAGTCATCG
ATGGTCACTAGGTCTCAAATAAGACTTTGCCGCGATAACTAAAGCAATTT
ACACCTTAAAAACTTGATACTCCAAATTATGATAAGATATTTTTTCTGAA
TTTCATAGATTTTTTATTTCTTTACTTACTTTAGATAGTTTATGTTTTGA
AAATGAAAAATTTATACCTCAAAAAATAAAGTCTGGTTGAA

Coding sequence (CDS) from alignment at scaffold_233:452020..457710-

>TCONS_00053661 ID=TCONS_00053661|Name=TCONS_00053661|organism=Clytia hemisphaerica|type=CDS|length=3135bp|location=Sequence derived from alignment at scaffold_233:452020..457710- (Clytia hemisphaerica)
GTTTCAGTATGACCGAGCGATCCGAATACGATGATAGTGTTGACGAATCG
TGTTTAGAAATCGATTGCAATAACCGAGGAACGGAGGAAGCGATGAAAAA
TTTATCGATTAATGCCGAAGAAGAAGAGAACAACGAGTCAAACGATAAAT
GTCCGACTAAATCGAATTGAGTACGAGAAAACCTTGAAATTTGATAAGAG
TGAAGTAGAGCCGAAATATTATGCTGATGGAGAAGACGCCTTTGCTATGA
AACGTGATCTGGCTGGACTAGCCCGTAAACTGATGGACCAAGCTGCAAGA
GCAATGGTTGAGAATTTCAAAGCTAAATATGTATCACTTCATGTGCGAGT
TAGCAATCGTGCAGCACTCAACTTGTTGTTGGTTATGTTTTGGCAAAGAT
GGAGGAAGAACCAGATGATGATATTCATGGTCATATCACATCTCTCGCTG
TTAAAAGGTCACATAGAAGATTAGATGAATCTTCGTTGTACACAACCTGA
AGATCTGATAAATATGCAACATTGTAACTTACTTTGTTTGCCAGAGAATT
ATCAGATGAAATACTATTTGTATCATGGTTTATCATGGCCACAATTAAGC
TATGTTGCTGAAGATCAAAATAAAAAGGTTTCAGTATGACCGAGCGATCC
GAATACGATGATAGTGTTGACGAATCGTGTTTAGAAATCGATTGCAATAA
CCGAGGAACGGAGGAAGCGATGAAAAATTTATCGATTAATGCCGAAGAAG
AAGAGAACAACGAGTCAAACGATAAATGTCCGACTAAATCGAATTGAGTA
CGAGAAAACCTTGAAATTTGATAAGAGTGAAGTAGAGCCGAAATATTATG
CTGATGGAGAAGACGCCTTTGCTATGAAACGTGATCTGGCTGGACTAGCC
CGTAAACTGATGGACCAAGCTGCAAGAGCAATGGTTGAGAATTTCAAAGC
TAAATATGTATCACTTCATGTGCGAGTTAGCAATCGTGCAGCACTCAACT
TGTTGTTGGTTATGTTTTGGCAAAGATGGAGGAAGAACCAGATGATGATA
TTCATGGTCATATCACATCTCTCGCTGTTAAAAGGTCACATAGAAGATTA
GATGAATCTTCGTTGTACACAACCTGAAGATCTGATAAATATGCAACATT
GTAACTTACTTTGTTTGCCAGAGAATTATCAGATGAAATACTATTTGTAT
CATGGTTTATCATGGCCACAATTAAGCTATGTTGCTGAAGATCAAAATAA
AAAGGTTTCAGTATGACCGAGCGATCCGAATACGATGATAGTGTTGACGA
ATCGTGTTTAGAAATCGATTGCAATAACCGAGGAACGGAGGAAGCGATGA
AAAATTTATCGATTAATGCCGAAGAAGAAGAGAACAACGAGTCAAACGAT
AAATGTCCGACTAAATCGAATTGAGTACGAGAAAACCTTGAAATTTGATA
AGAGTGAAGTAGAGCCGAAATATTATGCTGATGGAGAAGACGCCTTTGCT
ATGAAACGTGATCTGGCTGGACTAGCCCGTAAACTGATGGACCAAGCTGC
AAGAGCAATGGTTGAGAATTTCAAAGCTAAATATGTATCACTTCATGTGC
GAGTTAGCAATCGTGCAGCACTCAACTTGTTGTTGGTTATGTTTTGGCAA
AGATGGAGGAAGAACCAGATGATGATATTCATGGTCATATCACATCTCTC
GCTGTTAAAAGGTCACATAGAAGATTAGATGAATCTTCGTTGTACACAAC
CTGAAGATCTGATAAATATGCAACATTGTAACTTACTTTGTTTGCCAGAG
AATTATCAGATGAAATACTATTTGTATCATGGTTTATCATGGCCACAATT
AAGCTATGTTGCTGAAGATCAAAATAAAAAGGTTTCAGTATGACCGAGCG
ATCCGAATACGATGATAGTGTTGACGAATCGTGTTTAGAAATCGATTGCA
ATAACCGAGGAACGGAGGAAGCGATGAAAAATTTATCGATTAATGCCGAA
GAAGAAGAGAACAACGAGTCAAACGATAAATGTCCGACTAAATCGAATTG
AGTACGAGAAAACCTTGAAATTTGATAAGAGTGAAGTAGAGCCGAAATAT
TATGCTGATGGAGAAGACGCCTTTGCTATGAAACGTGATCTGGCTGGACT
AGCCCGTAAACTGATGGACCAAGCTGCAAGAGCAATGGTTGAGAATTTCA
AAGCTAAATATGTATCACTTCATGTGCGAGTTAGCAATCGTGCAGCACTC
AACTTGTTGTTGGTTATGTTTTGGCAAAGATGGAGGAAGAACCAGATGAT
GATATTCATGGTCATATCACATCTCTCGCTGTTAAAAGGTCACATAGAAG
ATTAGATGAATCTTCGTTGTACACAACCTGAAGATCTGATAAATATGCAA
CATTGTAACTTACTTTGTTTGCCAGAGAATTATCAGATGAAATACTATTT
GTATCATGGTTTATCATGGCCACAATTAAGCTATGTTGCTGAAGATCAAA
ATAAAAAGGTTTCAGTATGACCGAGCGATCCGAATACGATGATAGTGTTG
ACGAATCGTGTTTAGAAATCGATTGCAATAACCGAGGAACGGAGGAAGCG
ATGAAAAATTTATCGATTAATGCCGAAGAAGAAGAGAACAACGAGTCAAA
CGATAAATGTCCGACTAAATCGAATTGAGTACGAGAAAACCTTGAAATTT
GATAAGAGTGAAGTAGAGCCGAAATATTATGCTGATGGAGAAGACGCCTT
TGCTATGAAACGTGATCTGGCTGGACTAGCCCGTAAACTGATGGACCAAG
CTGCAAGAGCAATGGTTGAGAATTTCAAAGCTAAATATGTATCACTTCAT
GTGCGAGTTAGCAATCGTGCAGCACTCAACTTGTTGTTGGTTATGTTTTG
GCAAAGATGGAGGAAGAACCAGATGATGATATTCATGGTCATATCACATC
TCTCGCTGTTAAAAGGTCACATAGAAGATTAGATGAATCTTCGTTGTACA
CAACCTGAAGATCTGATAAATATGCAACATTGTAACTTACTTTGTTTGCC
AGAGAATTATCAGATGAAATACTATTTGTATCATGGTTTATCATGGCCAC
AATTAAGCTATGTTGCTGAAGATCAAAATAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033845XLOC_033845Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053661-exon-scaffold_233-1575043694:457139..457710TCONS_00053661-exon-scaffold_233-1575043694:457139..457710Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1575043694:456733..456832TCONS_00053661-exon-scaffold_233-1575043694:456733..456832Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1575043694:454916..455024TCONS_00053661-exon-scaffold_233-1575043694:454916..455024Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1575043694:454231..454325TCONS_00053661-exon-scaffold_233-1575043694:454231..454325Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1575043694:452020..453327TCONS_00053661-exon-scaffold_233-1575043694:452020..453327Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1510915933:457139..457710TCONS_00053661-exon-scaffold_233-1510915933:457139..457710Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1510915933:456733..456832TCONS_00053661-exon-scaffold_233-1510915933:456733..456832Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1510915933:454916..455024TCONS_00053661-exon-scaffold_233-1510915933:454916..455024Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1510915933:454231..454325TCONS_00053661-exon-scaffold_233-1510915933:454231..454325Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1510915933:452020..453327TCONS_00053661-exon-scaffold_233-1510915933:452020..453327Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1491911889:457139..457710TCONS_00053661-exon-scaffold_233-1491911889:457139..457710Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1491911889:456733..456832TCONS_00053661-exon-scaffold_233-1491911889:456733..456832Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1491911889:454916..455024TCONS_00053661-exon-scaffold_233-1491911889:454916..455024Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1491911889:454231..454325TCONS_00053661-exon-scaffold_233-1491911889:454231..454325Clytia hemisphaericaexon
TCONS_00053661-exon-scaffold_233-1491911889:452020..453327TCONS_00053661-exon-scaffold_233-1491911889:452020..453327Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053661-proteinTCONS_00053661-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:452020..457710 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.1162	31.2528	22.6906	19.8781	30.7	23.0508	28.7363	29.8019	26.226	23.5802	21.1219	16.82	13.0385	12.4876	17.0253	16.0228	27.5512	23.4377	8.04307	8.86282	22.0935	22.634	34.9571	33.4877	14.4533	21.8149	13.5737	8.61432	19.7137	17.1027
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000182GNAT_dom
IPR016181Acyl_CoA_acyltransferase
Vocabulary: Molecular Function
TermDefinition
GO:0008080N-acetyltransferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008080 N-acetyltransferase activity
Blast
[Close]
BLAST of TCONS_00053661 vs. Swiss-Prot (Human)
Match: NAA11 (N-alpha-acetyltransferase 11 OS=Homo sapiens GN=NAA11 PE=1 SV=3)

HSP 1 Score: 276.174 bits (705), Expect = 7.996e-87
Identity = 128/163 (78.53%), Postives = 143/163 (87.73%), Query Frame = 3 
Query:  420 MNLRCTQPEDLINMQHCNLLCLPENYQMKYYLYHGLSWPQLSYVAEDQNKKVVGYVLAKMEEEPDDDIHGHITSLAVKRSHRRLGLARKLMDQAARAMVENFKAKYVSLHVRVSNRAALNLYEKTLKFDKSEVEPKYYADGEDAFAMKRDLAGFSMTERSEYD 908
            MN+R  QP+DL+NMQHCNLLCLPENYQMKYYLYHGLSWPQLSY+AED++ K+VGYVLAKMEEEPDD  HGHITSLAVKRSHRRLGLA+KLMDQA+RAM+ENF AKYVSLHVR SNR AL+LY  TL F  SEVEPKYYADGEDA+AMKRDL+  +   R + D
Sbjct:    1 MNIRNAQPDDLMNMQHCNLLCLPENYQMKYYLYHGLSWPQLSYIAEDEDGKIVGYVLAKMEEEPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRPALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDLSQMADELRRQMD 163
The following BLAST results are available for this feature:
BLAST of TCONS_00053661 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NAA117.996e-8778.53N-alpha-acetyltransferase 11 OS=Homo sapiens GN=NA... [more]
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