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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053744 ID=TCONS_00053744|Name=TCONS_00053744|organism=Clytia hemisphaerica|type=transcript|length=999bp
AAaagacatatttttcaaaataatatattttttttaaatagatatTAAGT
ATTCAAATTGtaattttctatttcattttGAACTACCAATTCGAAGGTAG
TTTATATTGTTTATACTGTAAATAGTGCTTGTGTTATAGTTTTAGATATA
TTTTTGGATACATTCGGGATTATAGACTGACGAAGGTTATGTCATGTCTT
CTACATTCAGAATTTAACCCCGGGGTTTAAGTAAATCTCGAAAGGGGTTC
GTCCTTCCTGGACCTGAGCAGTTGTCGGGGTTTCGCGGGGTTTACATTTA
CGGATCGATTATCTATTTAAACTCGCAATTTCTAGTGCGTTACCctataa
atttaaatattttgcttgcaacttgcgaatcgaatgacttgcctggatcg
cttcgcaattcttatacataaaCACTAGTTTAAGGGTCAAATGTTTAAAT
GCTAGATGCATCGCATTTCTTCAAAAGAGAAGTCTTTGAAAATAATCGCG
TGAGGTCAAACACTTTCACCATACCTTATCATATCATGTGATCAAATTCC
TTTACAATAGATCCTATTACAATTATCAGTTGGAATGATGAGAAAGTTTT
TAAATACACAGATCCTAAATGATAGCCTTGAATCAACAAACTTTGAGGAG
TGAGTGAATAGGATTCTTTCTCTTGCTCTCTCTCTGAATCGACCCTGATA
TCAAGTTTCAAACATTCTCTAATCGATTAAAGATGAAACTTTCCTAAAGT
CGAAATCCAAATTAATTTTGTAAATACTGTTGAGTTTTATAAGTTTTATT
TTCCAATCATCTAATATGATAATTTATTCATTAGACAACATTATGTACAA
TATGTAGATATTTCTAAAGTTATAACGAGAGTAGATTAGTAATTATAATT
AACTATAATCAACTCAGTACGTGTACAATTTTcttgggagtttctaaaca
tcgaccagaaatggcgaccacgaccagcgaccacgaccggcgaccagat Run BLAST on NCBI transcript from alignment at scaffold_233:821424..822422 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053744 ID=TCONS_00053744|Name=TCONS_00053744|organism=Clytia hemisphaerica|type=transcript|length=999bp|location=Sequence derived from alignment at scaffold_233:821424..822422 (Clytia hemisphaerica)
atctggtcgccggtcgtggtcgctggtcgtggtcgccatttctggtcgat
gtttagaaactcccaagAAAATTGTACACGTACTGAGTTGATTATAGTTA
ATTATAATTACTAATCTACTCTCGTTATAACTTTAGAAATATCTACATAT
TGTACATAATGTTGTCTAATGAATAAATTATCATATTAGATGATTGGAAA
ATAAAACTTATAAAACTCAACAGTATTTACAAAATTAATTTGGATTTCGA
CTTTAGGAAAGTTTCATCTTTAATCGATTAGAGAATGTTTGAAACTTGAT
ATCAGGGTCGATTCAGAGAGAGAGCAAGAGAAAGAATCCTATTCACTCAC
TCCTCAAAGTTTGTTGATTCAAGGCTATCATTTAGGATCTGTGTATTTAA
AAACTTTCTCATCATTCCAACTGATAATTGTAATAGGATCTATTGTAAAG
GAATTTGATCACATGATATGATAAGGTATGGTGAAAGTGTTTGACCTCAC
GCGATTATTTTCAAAGACTTCTCTTTTGAAGAAATGCGATGCATCTAGCA
TTTAAACATTTGACCCTTAAACTAGTGtttatgtataagaattgcgaagc
gatccaggcaagtcattcgattcgcaagttgcaagcaaaatatttaaatt
tatagGGTAACGCACTAGAAATTGCGAGTTTAAATAGATAATCGATCCGT
AAATGTAAACCCCGCGAAACCCCGACAACTGCTCAGGTCCAGGAAGGACG
AACCCCTTTCGAGATTTACTTAAACCCCGGGGTTAAATTCTGAATGTAGA
AGACATGACATAACCTTCGTCAGTCTATAATCCCGAATGTATCCAAAAAT
ATATCTAAAACTATAACACAAGCACTATTTACAGTATAAACAATATAAAC
TACCTTCGAATTGGTAGTTCaaaatgaaatagaaaattaCAATTTGAATA
CTTAatatctatttaaaaaaaatatattattttgaaaaatatgtcttTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053744-exon-scaffold_233-1491911889:821424..822422 | TCONS_00053744-exon-scaffold_233-1491911889:821424..822422 | Clytia hemisphaerica | exon |
| TCONS_00053744-exon-scaffold_233-1510915933:821424..822422 | TCONS_00053744-exon-scaffold_233-1510915933:821424..822422 | Clytia hemisphaerica | exon |
| TCONS_00053744-exon-scaffold_233-1575043694:821424..822422 | TCONS_00053744-exon-scaffold_233-1575043694:821424..822422 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_233 | supercontig | scaffold_233:821424..822422 . |
Blast
The following BLAST results are available for this feature:
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