TCONS_00054799 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054799
Unique NameTCONS_00054799
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2041

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054799 ID=TCONS_00054799|Name=TCONS_00054799|organism=Clytia hemisphaerica|type=transcript|length=2041bp
AATCAAGTGTAGGCTTTGACAACCAACACTGTTATGTTAAACGTGGATTG
AAAAGCAATCAAAAAAGATTGGATTAATTTTCAGTCGAGTGAAAAAAAAT
GGATTAGTATAGTAAGTGTTTCATTTCGTCTTTATGTTTTTGCGGTACAT
CATATCATTTGAGCTTTGTTTTGAACTCGTTGCAAGGGAACTGATTGATT
AGCAAGTAAAAAGTTAGAGGGAAGTTTCATTCTTGAATTTCACTCAGAAA
AACGACGGAAAAAGCACCGATTTCACTTTGCAGGCATCTTGAATCTAAAA
AAGGACAATCTTTTAAATACGCAGAGGGGCGAAGGACAAAGAGATACGTT
AAACCTAACAAACATTTATGAGATTTTTATGACTTtgtgaaaatatattt
tactttaCTGATCATAAGTTTATTGTAACCATGGCAACACACGGGAGAAG
ATTATTGAATTGGAATCATGCCTGTAACACTTGTTAAGAGTTTTGAAGAA
CCGTCAGACGATACAGTAGAGAAAGAAGATCGAGATAAAAAGACGATGGG
AAAAACGCTGTCTAAATGGATGTTCAAAAATGCTAACAGTGTGGCAGATA
TGTCGGAAGACCGGGTCCAACAAGTACCCGGATCTTTAGGCTTAACCTTG
TTCAATGTGATGGGATTGGTCAAATCCGGACACCTTTTCTACCGGAACAG
ACGAGATCGaaacaaatcgaatgtttacaaggtGTCTATCTACCAGCCGA
GAATCGTTTTATGTAGTTTTGATGGCATACGACAAATGTACGAAAACACA
GCCGTCCGAAAAGAACCAAGCTTCGGAATGTTTGTCTTCAACCAGGAAAT
CTTAGGAAATCACACACCTTTGATTTTCGAAAATGACGAAATACACCATC
AAAGACGTCACATTTTTATCGAACTGTCAAAGAAAATATTCTgtaacaaa
aatttcatcaacGAGCTTTCCCAAAGCATTAGTTCAGAATTAGACCACGT
GATTGATACAATGACATCACAACCATCGTCTGATTTCGAAGATGCATTAT
CTGGCGCTGTTGGGAACGTCGTTACCAGATGCATTGTGGGAAAAACAATC
GATAACGAACTCCTTAAGAAATGGATGGATAATTGCTTgatcaagaaatt
caagaaagcAAGAGCAGAAGGGCCTTTGGTTTATGAGAAAATACGACAAT
CGGTAAAAGAAGGTCCGATTTTCCGTGAGTTTGCTGCAGGTTTAGTAAAA
AAGAACGGCTTGTTGGAGGAAGATATATGCAACGAGATCATCTTTGCTTT
GATTTTCAATGCTTATAAAGCATTACACGGGTTTGTCGTTTCCGCCCTTG
TTCATTTATCCAACCTCTCTGAAGACAAACAGATCAAACTACAAAACGAT
GcctcaaactttcaccaaagcaCCGACAAAACAACAGAATTAAATAGTGC
AACTGATGTGGAGAATTATACACTTGAGATATTTCGCTTATTCCCGCCCG
CTTCGTTTGTGTTCCGGAGAGTGACGGAGAACTTCGTACTTCCGTTAAAA
TCCGGTAACTATCAGGTCAACAAAGACGATCTCTTGTGTGGAAACGTCTA
TTTGAGTCAAAGAGATCCCGATATCTTCGACAATCCAGATAAATTAGACC
CTGACCGTTTCCAGCGACAACCACATCTCAAAGACTATTTAACATGTTTT
GGCGCTCCATTCTTACAAGACAGTGTGCCGAATATACATAAATGTGGAGG
TCAAAAACTAGCCTTAACCTTTGCAAAGGTCTTTGTAATGCACCTTTTGA
CATTGAGAATTGAGTACGACGGACAACCTTCATGGTCCGGTAAGAAAATT
AAGCGAATCATTGGTTCAGATAAACCAGTGAGAGTGAAAGCTATACGGAA
ATGAATATAATGCATCTTAATAAGGCATACCTACGTTTGAGAGATTGAAG
ATTGTATAAAGGGAACGAAAATTGAACGTACAACGGACACCAATTTCAGA
TTTGCAGGATTTGAcactttttgatttaattcGAAAAAAGA
Run BLAST on NCBI

protein sequence of TCONS_00054799-protein

>TCONS_00054799-protein ID=TCONS_00054799-protein|Name=TCONS_00054799-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
MPVTLVKSFEEPSDDTVEKEDRDKKTMGKTLSKWMFKNANSVADMSEDRV
QQVPGSLGLTLFNVMGLVKSGHLFYRNRRDRNKSNVYKVSIYQPRIVLCS
FDGIRQMYENTAVRKEPSFGMFVFNQEILGNHTPLIFENDEIHHQRRHIF
IELSKKIFCNKNFINELSQSISSELDHVIDTMTSQPSSDFEDALSGAVGN
VVTRCIVGKTIDNELLKKWMDNCLIKKFKKARAEGPLVYEKIRQSVKEGP
IFREFAAGLVKKNGLLEEDICNEIIFALIFNAYKALHGFVVSALVHLSNL
SEDKQIKLQNDASNFHQSTDKTTELNSATDVENYTLEIFRLFPPASFVFR
RVTENFVLPLKSGNYQVNKDDLLCGNVYLSQRDPDIFDNPDKLDPDRFQR
QPHLKDYLTCFGAPFLQDSVPNIHKCGGQKLALTFAKVFVMHLLTLRIEY
DGQPSWSGKKIKRIIGSDKPVRVKAIRK
Run BLAST on NCBI

transcript from alignment at scaffold_245:142526..148071-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054799 ID=TCONS_00054799|Name=TCONS_00054799|organism=Clytia hemisphaerica|type=transcript|length=5546bp|location=Sequence derived from alignment at scaffold_245:142526..148071- (Clytia hemisphaerica)
AATCAAGTGTAGGCTTTGACAACCAACACTGTTATGTTAAACGTGGATTG AAAAGCAATCAAAAAAGATTGGATTAATTTTCAGTCGAGTGAAAAAAAAT GGATTAGTATAGTAAGTGTTTCATTTCGTCTTTATGTTTTTGCGGTACAT CATATCATTTGAGCTTTGTTTTGAACTCGTTGCAAGGGAACTGATTGATT AGCAAGTAAAAAGTTAGAGGGAAGTTTCATTCTTGAATTTCACTCAGAAA AACGACGGAAAAAGCACCGATTTCACTTTGCAGGCATCTTGAATCTAAAA AAGGACAATCTTTTAAATACGCAGAGGGGCGAAGGACAAAGAGATACGTT AAACCTAACAAACATTTATGAGATTTTTATGACTTTGTGAAAATATATTT TACTTTACTGATCATAAGTTTATTGTAACCATGGCAACACACGGGAGAAG ATGTAAGTATCTTTTACATGTCTGATATCCGCACAGGCTAATTTGGAGAA CGCACTGCGGCTATGGGATTGTATGGGTTTTTATGTTTGATTTGATAGAA AACAGGGATTGGGGGTTAAGTTAGTCACAAGTGATATTGCGTAGCACAGT TGCATGATATGACTAGGTAAACTAATTAAAATTCACAACTATATTTTATG TACACAAACACGAGAAAGTTCAGGTTGTTAAGTTGATGAGAATTTCTTTG CTTGCGAAATCGTTTGTGTAGTAAGGAAGTATACATACCAGATATTAGTT TGTAAGCATTGATTTACTAGTATTATATTCAACTAGCCCTACTAAACAAA ACTATGGTCACTCCAATAAAATGGCATTTCCTCTCTCTCTCTGAGAAAGA GACCGACGGGGTTTGCAGCTGTAATCTTTTAAAAATCTTCTTTTGAAATT TAGGAATAAGTCTCCTTTAAATGGATCTACTTTTCCTCAAAGTTCCTATA CTGTAATAGCATCTAGAATAGCACAAAATAGCATCACATCTCCGTATCCT GCTTGAACTAGCCTATACTAGACGTTACGGCTTTCTATTTTTCTACGCTG AAAAATCCCGGTTTTTGGTGAGGTGCTCGCTACCTAAGTACCCACTATTT CTATAAGTACTCCCATCAGGATTCCTTCTAACGGAAAAACTCAGAAACCG AATACATCAATATCTAGGTGGAACAGCAGTGATTTTTAACAATTTTCCTG CAATTCATCAAAAAGTAAATTATTTCAAATCAAAAGCTAAACGAAAATGG CAAAAACCTCACGGGGTCATCATAGAGGCTCATTGAGAATAAATCTAAAA CATCTATCCATATCGTGCCCTTCATAGTTTGAACAGGAAAACATGTAAAC AAATAAAATCCTTGATTGCAGTGGTAAGAAGTAAAATTTACACGTTTTTT TATAACAACAAACTATATAAGAACATTTTCATTTTGCTTTCAATGGCCAA AATATCAAGAACAAGTTAAGAAAATCTTAAGCCTTTGTAGACTCCAAAAC ACAAAAACACAAACACAAAAAGGAGAAAACAAGAACATATTAACCCTTTA ACCGCCGTTCGTATTTTTTAAGGTTCGACCTATTTGCCACGGAAAAAAAG AAGGTTCGACCTATTTGCCTATGTCGGCATATGCTGACATGGGAAAAAAG TAGCGATTTTGAGTTCATTTTCTGAATAATATATGAAGTATTAGCCAAGG ACTATAACTTTGAGTTGAACATTGTAGAATAGTTATTTTTCAACATAGAA AAGTTTGTAACTATTAATTTTTTATTCAAACCACCTAATACAAAAACCTT GTAAAAAATGATAAATTTTCGGCAAATAGGTCGAAATTTCGCATGTCGGC AAATCCCGACAATGACAAGGAAATCGAAAATGCTCATGTCGGCATATGCC GACATCGGCACGGAAATGGTTAAGAACATTTTTGGGCTTAAAACTCAAAA GCTAAGAACATCCGAAGACTTTTTGGATATTCTTATAAAAAAACCCGTGT AAATGAAAATCAGTAAAAACACCAAAAGCTCAGAGTCAAGAAATATTTTG GTTTTGCTATACCAGTTTAAGATATCAGACCAGAAGACTCAAGAAAGGAG ACAAAACTTCATAGGGGATTTGTACTTTTACGGTGTGACAGGATCGGCCC TTTTCTAGTACGATATTACGGGATTTTTTTCAATTTTCAGGATTCCGGGG TTCAGCAAAAACTTTAACGGGAAAACGGTATTTCGTACCCCCTACAACCT CCCCCCCTTCATACAGTGTATGTAGAAAGGGGATGAGTAGTTAGGTGTCG ATAAGTGGGTAAACATTAAAGGTTACACACAGGGGGTGGATGATCAAGTC TTTTTTGATTGGTAAAATACGTCATATTGTGTAAAAATAAATCACGGCAA TTCATTAAAGTATGAAATGAGATTACGTTTTGCTGTGATTACCCCTTGGC AAGAAAATAGATCACGAATTCTCATCTCCTGTGAAGTTACATGTTGAGAG AGGAATTATTTGTTTTTCTGATAGATTAAATATAAGTCAAGTTCGGTCAG GTGAAAATTATGATAATTAATTTGATTAAGGAATCATTAGGTAAGATTTA GTCTTAAATTTGATTTTGAAAGAATTATAGTACTATTTATGAGATATGAT TGGTTGGGTACGCAGAAAAAAAGTGATTCTTGTTGTTAATATTCATGGTT ATTCTTTCAGGCCGTGTACTGTATCCTATCTTTAAGATAATTGTATTGAA AGTAGCTTCGATTACGTTCAGATTTTGGTAGTCCGCAGACAAGTTTAGCG AAGATACTTTCTGGAAAAAGAGAGTACACATTTGATACAAGTGTTTTGAA TTCAAAGTCTTCTCCCTTGTTCATAGAACAAGAGAAACTTTCGAGTTGAA AAAGTTAGTTTTATATAGTTGGTTATTGATACATTTGAGTCAATATTTAA GAAAACTAAAAACACCAGAAAGTACACAGTTACTAGTCTATAAGTAAGTT CTCAGGTTGCTCTACTTTTTTATCTTTTGACTTGATTTTCTTGATTAACA GTAGTGATATTATTGTACTATTTTATCAATTTTGGTTTTTATAAAAAGGG AAGAGGGAAGGAATTAAAGTAGACTGGAGTCGTTCATAATGCATAGTATA GGCGTTATATGATAATATGATTATTGTTACGGGATTTAGCTGGTATAAAA TTTGTTCACTCCATTACTTTTTGCGTTATTTCTACTATGTCTGAATTAGT CGTCTAGCTTGCTAGACTAGAATTAAAGAGAGTTTCTGATCGATCGTCGG CCAAAGTACATTTTAGAGGGCAAAAAGTATTTTTGACTAAACTAAAAGTT TTTCTTGGTAACAACTATCTATTCTCAAACATTATCATAGAGGATATCTT ATATTATAAAATGATAAAAGGGTTTTTATTGAGGTGTAAATTTGCGCTTG TCGATTCAAAAATCTTAGAGATGAGGTAATCGCAAAACGAAATTTTGTTA CACAAAAATTAACACCATGCTATCAAGAATTTGAGCAAACTGCGTGAATA TTAACTAATAAGTTCCTATGGCGATCAACGAAACAACGGGAAAACTCAAC TAAGCTGGATGCTAATTTTCTAAATCAGTTTAATTCTTTATTGATATTTT TCTATTGATTTTTAGTATTGAATTGGAATCATGCCTGTAACACTTGTTAA GAGTTTTGAAGAACCGTCAGACGATACAGTAGAGAAAGAAGATCGAGATA AAAAGACGATGGGAAAAACGCTGTCTAAATGGATGTTCAAAAATGCTAAC AGTGTGGCAGATATGTCGGAAGACCGGGTCCAACAAGTACCCGGATCTTT AGGCTTAACCTTGTTCAATGTGATGGGATTGGTCAAATCCGGACACCTTT TCTACCGGAACAGACGAGATCGAAACAAATCGAATGTTTACAAGGTGTCT ATCTACCAGCCGAGAATCGTTTTATGTAGTTTTGATGGCATACGACAAAT GTACGAAAACACAGCCGTCCGAAAAGAACCAAGCTTCGGAATGTTTGTCT TCAACCAGGAAATCTTAGGAAATCACACACCTTTGATTTTCGAAAATGAC GAAATACACCATCAAAGACGTCACATTTTTATCGAACTGTCAAAGAAAAT ATTCTGTAACAAAAATTTCATCAACGAGCTTTCCCAAAGCATTAGTTCAG AATTAGACCACGTGATTGATACAATGACATCACAACCATCGTCTGATTTC GAAGATGCATTATCTGGCGCTGTTGGGAACGTCGTTACCAGATGCATTGT GGGAAAAACAATCGATAACGAACTCCTTAAGAAATGGATGGATAATTGCT TGATCAAGAAATTCAAGAAAGCAAGAGCAGAAGGGCCTTTGGTTTATGAG AAAATACGACAATCGGTAAAAGAAGGTCCGATTTTCCGTGAGTTTGCTGC AGGTTTAGTAAAAAAGAACGGCTTGTTGGAGGAAGATATATGCAACGAGA TCATCTTTGCTTTGATGTGAGTATTATTTATTGGCTTTAAAGATAGGATA GTGTCAAAATAAGCAATTACTCATATTGATATGTTTTTCATAATTCGCCT CAGGGAATTGAGACGAAGCAACCACCCAATCAATCAAGTTAAGTAATCTT CTTTAAAAAGGTCTGTGTTGCATTGATAGCACTTTCAAAAATTGTGTCTT CTAACTTATTCGTCGCATCGATTGCGATAAGGTGAAGGAATAAAGTAGCA AAATTGGGTATTATACATGGTTTTGATGATAAAACATTCTTATTTTTTTC TCTTCTAGTTTCAATGCTTATAAAGCATTACACGGGTTTGTCGTTTCCGC CCTTGTTCATTTATCCAACCTCTCTGAAGACAAACAGATCAAACTACAAA ACGATGCCTCAAACTTTCACCAAAGCACCGACAAAACAACAGAATTAAAT AGTGCAACTGATGTGGAGAATTATACACTTGAGATATTTCGCTTATTCCC GCCCGCTTCGTTTGTGTTCCGGAGAGTGACGGAGAACTTCGTACTTCCGT TAAAATCCGGTAACTATCAGGTCAACAAAGACGATCTCTTGTGTGGAAAC GTCTATTTGAGTCAAAGAGATCCCGATATCTTCGACAATCCAGATAAATT AGACCCTGACCGTTTCCAGCGACAACCACATCTCAAAGACTATTTAACAT GTTTTGGCGCTCCATTCTTACAAGACAGTGTGCCGAATATACATAAATGT GGAGGTCAAAAACTAGCCTTAACCTTTGCAAAGGTCTTTGTAATGCACCT TTTGACATTGAGAATTGAGTACGACGGACAACCTTCATGGTCCGGTAAGA AAATTAAGCGAATCATTGGTTCAGATAAACCAGTGAGAGTGAAAGCTATA CGGAAATGAATATAATGCATCTTAATAAGGCATACCTACGTTTGAGAGAT TGAAGATTGTATAAAGGGAACGAAAATTGAACGTACAACGGACACCAATT TCAGATTTGCAGGATTTGACACTTTTTGATTTAATTCGAAAAAAGA

Coding sequence (CDS) from alignment at scaffold_245:142526..148071-

>TCONS_00054799 ID=TCONS_00054799|Name=TCONS_00054799|organism=Clytia hemisphaerica|type=CDS|length=2874bp|location=Sequence derived from alignment at scaffold_245:142526..148071- (Clytia hemisphaerica)
TTTCAATGCTTATAAAGCATTACACGGGTTTGTCGTTTCCGCCCTTGTTC
ATTTATCCAACCTCTCTGAAGACAAACAGATCAAACTACAAAACGATGCC
TCAAACTTTCACCAAAGCACCGACAAAACAACAGAATTAAATAGTGCAAC
TGATGTGGAGAATTATACACTTGAGATATTTCGCTTATTCCCGCCCGCTT
CGTTTGTGTTCCGGAGAGTGACGGAGAACTTCGTACTTCCGTTAAAATCC
GGTAACTATCAGGTCAACAAAGACGATCTCTTGTGTGGAAACGTCTATTT
GAGTCAAAGAGATCCCGATATCTTCGACAATCCAGATAAATTAGACCCTG
ACCGTTTCCAGCGACAACCACATCTCAAAGACTATTTAACATGTTTTGGC
GCTCCATTCTTACAAGACAGTGTGCCGAATATACATAAATGTGGAGGTCA
AAAACTAGCCTTAACCTTTGCAAAGGTCTTTGTAATGCACCTTTTGACAT
TGAGAATTGAGTACGACGGACAACCTTCATGGTCCGGTAAGAAAATTAAG
CGAATCATTGGTTCAGATAAACCAGTGAGAGTGAAAGCTATACGGAAATG
AATGCCTGTAACACTTGTTAAGAGTTTTGAAGAACCGTCAGACGATACAG
TAGAGAAAGAAGATCGAGATAAAAAGACGATGGGAAAAACGCTGTCTAAA
TGGATGTTCAAAAATGCTAACAGTGTGGCAGATATGTCGGAAGACCGGGT
CCAACAAGTACCCGGATCTTTAGGCTTAACCTTGTTCAATGTGATGGGAT
TGGTCAAATCCGGACACCTTTTCTACCGGAACAGACGAGATCGAAACAAA
TCGAATGTTTACAAGGTGTCTATCTACCAGCCGAGAATCGTTTTATGTAG
TTTTGATGGCATACGACAAATGTACGAAAACACAGCCGTCCGAAAAGAAC
CAAGCTTCGGAATGTTTGTCTTCAACCAGGAAATCTTAGGAAATCACACA
CCTTTGATTTTCGAAAATGACGAAATACACCATCAAAGACGTCACATTTT
TATCGAACTGTCAAAGAAAATATTCTGTAACAAAAATTTCATCAACGAGC
TTTCCCAAAGCATTAGTTCAGAATTAGACCACGTGATTGATACAATGACA
TCACAACCATCGTCTGATTTCGAAGATGCATTATCTGGCGCTGTTGGGAA
CGTCGTTACCAGATGCATTGTGGGAAAAACAATCGATAACGAACTCCTTA
AGAAATGGATGGATAATTGCTTGATCAAGAAATTCAAGAAAGCAAGAGCA
GAAGGGCCTTTGGTTTATGAGAAAATACGACAATCGGTAAAAGAAGGTCC
GATTTTCCGTGAGTTTGCTGCAGGTTTAGTAAAAAAGAACGGCTTGTTGG
AGGAAGATATATGCAACGAGATCATCTTTGCTTTGATTTTCAATGCTTAT
AAAGCATTACACGGGTTTGTCGTTTCCGCCCTTGTTCATTTATCCAACCT
CTCTGAAGACAAACAGATCAAACTACAAAACGATGCCTCAAACTTTCACC
AAAGCACCGACAAAACAACAGAATTAAATAGTGCAACTGATGTGGAGAAT
TATACACTTGAGATATTTCGCTTATTCCCGCCCGCTTCGTTTGTGTTCCG
GAGAGTGACGGAGAACTTCGTACTTCCGTTAAAATCCGGTAACTATCAGG
TCAACAAAGACGATCTCTTGTGTGGAAACGTCTATTTGAGTCAAAGAGAT
CCCGATATCTTCGACAATCCAGATAAATTAGACCCTGACCGTTTCCAGCG
ACAACCACATCTCAAAGACTATTTAACATGTTTTGGCGCTCCATTCTTAC
AAGACAGTGTGCCGAATATACATAAATGTGGAGGTCAAAAACTAGCCTTA
ACCTTTGCAAAGGTCTTTGTAATGCACCTTTTGACATTGAGAATTGAGTA
CGACGGACAACCTTCATGGTCCGGTAAGAAAATTAAGCGAATCATTGGTT
CAGATAAACCAGTGAGAGTGAAAGCTATACGGAAATGAATGCCTGTAACA
CTTGTTAAGAGTTTTGAAGAACCGTCAGACGATACAGTAGAGAAAGAAGA
TCGAGATAAAAAGACGATGGGAAAAACGCTGTCTAAATGGATGTTCAAAA
ATGCTAACAGTGTGGCAGATATGTCGGAAGACCGGGTCCAACAAGTACCC
GGATCTTTAGGCTTAACCTTGTTCAATGTGATGGGATTGGTCAAATCCGG
ACACCTTTTCTACCGGAACAGACGAGATCGAAACAAATCGAATGTTTACA
AGGTGTCTATCTACCAGCCGAGAATCGTTTTATGTAGTTTTGATGGCATA
CGACAAATGTACGAAAACACAGCCGTCCGAAAAGAACCAAGCTTCGGAAT
GTTTGTCTTCAACCAGGAAATCTTAGGAAATCACACACCTTTGATTTTCG
AAAATGACGAAATACACCATCAAAGACGTCACATTTTTATCGAACTGTCA
AAGAAAATATTCTGTAACAAAAATTTCATCAACGAGCTTTCCCAAAGCAT
TAGTTCAGAATTAGACCACGTGATTGATACAATGACATCACAACCATCGT
CTGATTTCGAAGATGCATTATCTGGCGCTGTTGGGAACGTCGTTACCAGA
TGCATTGTGGGAAAAACAATCGATAACGAACTCCTTAAGAAATGGATGGA
TAATTGCTTGATCAAGAAATTCAAGAAAGCAAGAGCAGAAGGGCCTTTGG
TTTATGAGAAAATACGACAATCGGTAAAAGAAGGTCCGATTTTCCGTGAG
TTTGCTGCAGGTTTAGTAAAAAAGAACGGCTTGTTGGAGGAAGATATATG
CAACGAGATCATCTTTGCTTTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034520XLOC_034520Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054799-proteinTCONS_00054799-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054799-exon-scaffold_245-1575043694:147620..148071TCONS_00054799-exon-scaffold_245-1575043694:147620..148071Clytia hemisphaericaexon
TCONS_00054799-exon-scaffold_245-1575043694:143556..144406TCONS_00054799-exon-scaffold_245-1575043694:143556..144406Clytia hemisphaericaexon
TCONS_00054799-exon-scaffold_245-1575043694:142526..143263TCONS_00054799-exon-scaffold_245-1575043694:142526..143263Clytia hemisphaericaexon
TCONS_00054799-exon-scaffold_245-1510915933:147620..148071TCONS_00054799-exon-scaffold_245-1510915933:147620..148071Clytia hemisphaericaexon
TCONS_00054799-exon-scaffold_245-1510915933:143556..144406TCONS_00054799-exon-scaffold_245-1510915933:143556..144406Clytia hemisphaericaexon
TCONS_00054799-exon-scaffold_245-1510915933:142526..143263TCONS_00054799-exon-scaffold_245-1510915933:142526..143263Clytia hemisphaericaexon
TCONS_00054799-exon-scaffold_245-1491911889:147620..148071TCONS_00054799-exon-scaffold_245-1491911889:147620..148071Clytia hemisphaericaexon
TCONS_00054799-exon-scaffold_245-1491911889:143556..144406TCONS_00054799-exon-scaffold_245-1491911889:143556..144406Clytia hemisphaericaexon
TCONS_00054799-exon-scaffold_245-1491911889:142526..143263TCONS_00054799-exon-scaffold_245-1491911889:142526..143263Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_245supercontigscaffold_245:142526..148071 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.16996 0.372754 0.5792 1.88083 1.48626 5.04312 7.23934 1.77675 3.09214 1.95965 3.11977 0.927067 1.44494 0 0.106237 4.83014 7.55641 3.14741 3.63044 8.00595 5.10964 3.89633 4.3958 3.5564 6.93268 165.092 130.15 1.35451 0.591442
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001128Cyt_P450
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0020037heme binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054799 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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