TCONS_00057849 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00057849
Unique Name	TCONS_00057849
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1927

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_3:95124..100811+
coding sequence from alignment at scaffold_3:95124..100811+

transcript sequence

>TCONS_00057849 ID=TCONS_00057849|Name=TCONS_00057849|organism=Clytia hemisphaerica|type=transcript|length=1927bp
GTAAACCTGACAGATTCGAAGATTTTTGAATGTAAATTTTTTGGAAGTCC
CATACCAGAAGTCTCATGGAAAAGCCCTAAATCTCAATTTATCATCAATG
ATACAATTGATAAagaaagttcaacgatcacgaGTCGATTGATTTTGACG
AATATTTCTTGGTATGACCAAGGACCTGTAAAATGCAACGCAAAGAGCTT
GCTTGGAGAAGACTCTGGTTATGGAAACTTGTCAACTTTATCGAAACCTG
TCATCAGTATGAACAAAAAATTGGTTTTCGCACCAGAGAGGATCAACTTT
ACATTTCCAGAATGCAAAGTTCGTTCCAATCCAACAGCGAAAGTGACGTG
GAAACGAATTTTTTGGTCGATGCCAGCTGGACGTGTTCATGTCCGAGAAA
ACACATTGACGATCAACCATGTTCAATATTCGGACGAAGGTTTCTATGTC
TGCGAGGCTGATAATTTCCTAGgaaaagataaaaagacTATTCAATTGAA
AATCAAGCCTTTTGAAATGCACCAAACTTCGGCATCGAAAATCTATATTC
CATCAGGCGAAAATGCAACAATATCGTGTTCAGCATACGGAAATAACCAT
GAGATGACCGGAACAATCACGAAATCCGGAGAAAAGATTTCATCAAAAGA
GGAACAGAAGACAGGGAATCTCTTTGAGGTGAAAGCGAATGTTACAAGTG
AGGGGACCTACCTTTGCACGattgaaaatagaaaagagAAGGCCGAAAGC
GCAACACTCGTCAAACACTTCAAACTATCATCCAGTCTCCTTAGCAGCGC
TCAACAATCACTTGTCGGAAGAGAGTTGAGAAAGATCAATAAAATTGGGA
AATACAAGAAATGTTTTGGATTGAGTTTACCCTCCACTACTTTTTACACT
TCCTGTGGTGGTAAAAAAGACACCATTACCTTCTTCAGAATTAAAGACAT
GTATAAAAGAAATCGGTACGGTAGTCGATATTACGCTTGGGGAAGCCGCT
ACATTGGAGGATTCACTGATCTGCCATGGCAAAAAGacaACCAGATGGAG
TACAGCAACTTAACAGCATTATTCGACCTCAGCAACCAAAGAATTTATCC
CAGCATCGAAGGAAGAGAAGCAGTTTGTTACCACGATGGTTACGGCCCTT
GTTTTGGAAATAAGGACTTGTATGTTGCAAGTGATGGGAAAATCTACAGA
TCAAGCTTAGGGAGTAGCTTCAATCCAAAACCAACATTTAATCAAAAAGA
GGTTCAATTCGAGACATTTTATCTGATGTAATGgaatcaaactttttcaa
tgtctttgattttatatttttataatttgattttatatttttataacgtt
ttaataattcaattttaatatttttatcttcatttatttttttcgtaata
ctttagacgtacaaactttcgcgagcagaaactttcgcagtTTTCGCGTA
TTtcggcccttttcgcgaaagtaaatgtatttaaaaattttaggaagggc
cattcgcgaaagtttatgctcgcgaaaaattcttgacaagatataaaatt
tgtaaaacttcaaactttgaataaaatgtaacttttatggcacctTTTAG
TCTGCTAAAGAATataaagtcaaaggacaaatgtttaaAGCCTAtctaag
aagtatttgtccctctgagctattttttaatgtgaaaattctaaatttac
gtcttgattcgcgaaagtttatgctcgcggaaaatatttttccgttaaat
tcgcgaattttcgtcctcgcgaaagtttgtacgcctaaagtattacCTGC
TAGGACACTGAGACACGCTATCACAATTAACCGTATTTCCTTTATTGAGG
GCCACCCTGCAATAAATAAATGCCCTGCTCTAAAGAACGACGCATCTgaa
atgagaaaatttgaaaagtgcCTGCTC

Run BLAST on NCBI

protein sequence of TCONS_00057849-protein

>TCONS_00057849-protein ID=TCONS_00057849-protein|Name=TCONS_00057849-protein|organism=Clytia hemisphaerica|type=polypeptide|length=426bp
VNLTDSKIFECKFFGSPIPEVSWKSPKSQFIINDTIDKESSTITSRLILT
NISWYDQGPVKCNAKSLLGEDSGYGNLSTLSKPVISMNKKLVFAPERINF
TFPECKVRSNPTAKVTWKRIFWSMPAGRVHVRENTLTINHVQYSDEGFYV
CEADNFLGKDKKTIQLKIKPFEMHQTSASKIYIPSGENATISCSAYGNNH
EMTGTITKSGEKISSKEEQKTGNLFEVKANVTSEGTYLCTIENRKEKAES
ATLVKHFKLSSSLLSSAQQSLVGRELRKINKIGKYKKCFGLSLPSTTFYT
SCGGKKDTITFFRIKDMYKRNRYGSRYYAWGSRYIGGFTDLPWQKDNQME
YSNLTALFDLSNQRIYPSIEGREAVCYHDGYGPCFGNKDLYVASDGKIYR
SSLGSSFNPKPTFNQKEVQFETFYLM

Run BLAST on NCBI

transcript from alignment at scaffold_3:95124..100811+

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00057849 ID=TCONS_00057849|Name=TCONS_00057849|organism=Clytia hemisphaerica|type=transcript|length=5688bp|location=Sequence derived from alignment at scaffold_3:95124..100811+ (Clytia hemisphaerica)
GTAAACCTGACAGATTCGAAGATTTTTGAATGTAAATTTTTTGGAAGTCC
CATACCAGAAGTCTCATGGAAAAGCCCTAAATCTCAATTTATCATCAATG
ATACAATTGATAAagaaagttcaacgatcacgaGTCGATTGATTTTGACG
AATATTTCTTGGTATGACCAAGGACCTGTAAAATGCAACGCAAAGAGCTT
GCTTGGAGAAGACTCTGGTTATGGAAACTTGTCAACTTTATGTAAGTTTG
TCTGTAATGTAAACCTATTTTCactattattattaatttcttatcattct
tttatttcataaaattgatCATCATAATTCAACTTTAAAGAACTTCATCC
TTTTTTTTCTAGCGAAACCTGTCATCAGTATGAACAAAAAATTGGTTTTC
GCACCAGAGAGGATCAACTTTACATTTCCAGAATGCAAAGTTCGTTCCAA
TCCAACAGCGAAAGTGACGTGGAAACGAATTTTTTGGTCGATGCCAGCTG
GACGTGTTCATGTCCGAGAAAACACATTGACGATCAACCATGTTCAATAT
TCGGACGAAGGTTTCTATGTCTGCGAGGCTGATAATTTCCTAGGTGAGTT
TGTGTGAATATAAAGCCTACTTAGCTTATACCGTCATGGTAAAATAAGGG
GTTTAACTTCTAATATCTATAATATATGGATAAGAGTTTAGACAAGGTGG
ATCGGAGACGTATTGTGTAACTTTTGGTCTCAAATATTGGCCAGCCTCTT
ATAAGTATAAGTTTGTGTAAGTGTAAATTTGTCCCCTCTATACAATCATA
TTTTCTATTTATAAGGGCTGCCTGCAACCATAACTGTTTGGCGGAAGGGT
GGAAAAAGATTCTCATTCAGCTTCAAATCTCTCACCGAAGGATCGATAGA
GCCCATCTTTCGGTTCACTTATGCCATTAGAATATAATATAGACCCGAAG
CAATGACATTTAGACAAAAAGGGTGGAAGGCGGCCGCCTATTCGCCAGGC
CTAGGCGCTGAGTTGGCTTTTTGCACTTTGAAAAGAGAATGAGGCACTCT
CTTCAGTTCTTGGACCTGGGTTGAGTTCGATATCCCCTGATAAAAAAGTG
TGGAATCAAACGTAATTAAAAAAGAGGTTTTCGGATCTCCTGaataatac
cttaagggaacttattttggcgagaacaaattttgaaaagcggcaaaaat
cctgaaaattttttattttggcgagaatttattttggcgattgaagaatt
tttataattttggcgagaactaattttggcgaataacagcgtaaatctgt
tctattttgccttatttgaagctttttttgtgaactcaaaaagttattta
ggcaaaataccaaaaaatttaattttggcgagaacttatcttggcgagtg
agcaaaatatttaattttggcgggaactaattttggcgaatttttcttta
aattcgccgaattcgccaaatttagttccGTTAAGGTAATTCTGCATTTG
GATATTgagcatggcgttctaaattacAGTCCTTATATTGAGCAAATACa
ccattttttttgaaacatgtaagaaatcaAGTGATGTTTGAAAAAGTGAC
TCATACGATTTTGGAATTGCGAATGAAAGGAGTGTAAAGAAAGCTAGAAC
GAAACTGGAACGAAATTTTTTGTTCTTGGTTAGTACTGCTACTGAGAAAA
ACAAGTACTTTTCGAAACTTAGATCTAGTTCTTCTTTTTATTAcaggaaa
agataaaaagacTATTCAATTGAAAATCAAGCCTTTTGAAATGCACCAAA
CTTCGGCATCGAAAATCTATATTCCATCAGGCGAAAATGCAACAATATCG
TGTTCAGCATACGGAAATAACCATGAGATGACCGGAACAATCACGAAATC
CGGAGAAAAGATTTCATCAAAAGAGGAACAGAAGACAGGGAATCTCTTTG
AGGTGAAAGCGAATGTTACAAGTGAGGGGACCTACCTTTGCACGattgaa
aatagaaaagagAAGGCCGAAAGCGCAACACTCGTCAAACACTTCAAACG
TAAGCAAACTAATTTTTGATTTGCAGCGAgacaaaaaatcacaatcagAT
AGGCAACATATATTCTGAATATGGTTAATTAATTAATAAAACGAAAATTT
GTTAAGTGGGGGAGCGCGTTTATAAGCAAGTCttcattttttcgattttt
tccgaTCATAATATAACATTCAAATCCTGAattgtcttttcaacaagcac
aaaaacAATATTCTAGCAAGGGACAGCTTTATTACACTGTGCATTATAGT
AGGGAGCCAAGCCTTGggtccgtgacatcttttctacgacctagccattt
tttttctattcaaaagaacagtatattaaaatatatttttgagaggaaGG
ACGCGGATTAgacccgggaaaactttttataaccaaaatagtgacgccat
aggcaaaactgcaagggaagtaaggggtagagaaatagctgattttcaaa
agtcaaaataaacgaaaatgattggtactatctgaaagagcatgaaattc
tgagcaaaaaaatgtattacaacaactctctgactaaaacacacaaagaa
atacagccacttgaagttcaaaaacataccgacgtcatTACGATCAAGAC
agcaagatttgacgtcaaatcacagtagagTTGGCAGTTAGTAGTTCTTA
AAGCAGCTGTATTCCTTTTTGTGTTTTAGTCGAGagagagagttgttgta
atcccggggggggtacttaggcaaaatgggtgccgggtatgtgcgagcca
taagggtaccttttttcattcctcaaaagtctctcaaaggggtacaaatt
ctaaagttagtctctgaaagggtcccaaaatcacaaaaatcaaaaatttc
tctctcaaagggtcacgtagactagcaaactagtctgtaaattaatcatg
tcagagggcgggaacataaaggcggcgggcgtttgctagaatatgagctg
cgtaggagagcgagcaaaagttggtgagaggctgctgatataGCCCTCGC
CTCAGCCctcgccgccgacaaaatttcttcctacgcttacctaactccta
cgctcacttttcccgcgtgataccgttccagcccgactggcgtgccagtc
taagggtcacgatttcctagaattttgaccaaaatttggtgaaaatcaaa
ccaaaatttggaaaaaatggaccaaaatttaggaaaaagtctctcaaagg
gtcccaaaatcaccaaaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAAGCCATAAGGGTAaaggtgaaaatc
aaaccaaaatttggaaaaaatggaccaaaattttggaaaaagtctctcaa
aaagGGTCccaaactaccaaaattttgtctctcaaagggtcgattttcga
ttttcggctcggacatacccgtcccCCCGCAaacctagtccccccccccc
ccggggttgtaatacaatttttttgctcagaatttcatgctctatcagat
ggtaccaatcattttcgtttattttggcttttgaaaataagctatttctc
tacccctcATTTTCctttgcagttttgcctatggcgtcactattttggtc
gtaaaaagttttcctgggcctaatccgcgtccttcctctcaaaaatatct
tgtaatttactgttctttggaatagactaaaaatggctaggtcgtagaaa
agatgtcacggaaccccaggcttggccccctactattatTGCGAGACAAT
TAAAGAGCCTACATCAGAACTAACTATTAATGCGAATTTAAAATTCCTCG
TTTTTGTAGTATCATCCAGTCTCCTTAGCAGCGCTCAACAATCACTTGTC
GGAAGAGAGTTGAGAAAGATCAATAAAATTGGGAAATACAAGAAATGTTT
TGGATTGAGTTTACCCTCCACTACTTTTTACACTTCCTGTGGTGGTAAAA
AAGACACCATTACCTTCTTCAGAATTAAAGACATGTATAAAAGAAATCGG
TACGGTAGTCGATATTACGCTTGGGGAAGCCGCTACATTGGAGGATTCAC
TGATCTGCCATGGCAAAAAGGTAAATTGTTTTACTGTTTTAATTAACCAT
CCACTACGTCCATATTGTCCATACTagactagtcggttattacttataac
cttataataaaactgtcaatcaaataatgtatacactaattaaatattca
gcgcgcgtgagagaaaagtaaaataaccgactagaagctacttccaacgc
ctttttttcttcacctaaaatcctAAAgggacccgtgcgggattgcattt
atttttctttctgtttattgcgtttttagaaatgctcatttattaatatg
ttcccatgttcaatgttactatgaaatatcatttagtcaaaaaagttgga
tggattctcaaaaacctaagaaaagttgtaaaattaaacaaagttttttg
agggaagtagcttctagtcgttgaaattcagaaaagagacacaacttcac
cccttcgattctttttatttggagcttgattttttgtatatgggtctgct
TTCAACAACTAGTCTACGTCCATACTtactctttttttccttttttaatc
aaTCGGTACACGTTTTTGCGTCAAATAATTATAACTGCAGTATTTAAtga
gtttgcaaaaaaaaaaaattgacaaaaaacaaaatgtctACCCCTTTTTT
GTAATTAGTAATCCGATAATTATTCcaatttattgtttttgttgcagaca
ACCAGATGGAGTACAGCAACTTAACAGCATTATTCGACCTCAGCAACCAA
AGAATTTATCCCAGCATCGAAGGAAGAGAAGCAGTTTGTTACCACGATGG
TTACGGCCCTTGTTTTGGAAATAAGGACTTGTATGTTGCAAGTGATGGGA
AAATCTACAGATCAAGCTTAGGGAGTAGCTTCAATCCAAAACCAACATTT
AATCAAAAAGAGGTTCAATTCGAGACATTTTATCTGATGTAATGgaatca
aactttttcaatgtctttgattttatatttttataatttgattttatatt
tttataacgttttaataattcaattttaatatttttatcttcatttattt
ttttcgtaatactttagacgtacaaactttcgcgagcagaaactttcgca
gtTTTCGCGTATTtcggcccttttcgcgaaagtaaatgtatttaaaaatt
ttaggaagggccattcgcgaaagtttatgctcgcgaaaaattcttgacaa
gatataaaatttgtaaaacttcaaactttgaataaaatgtaacttttatg
gcacctTTTAGTCTGCTAAAGAATataaagtcaaaggacaaatgtttaaA
GCCTAtctaagaagtatttgtccctctgagctattttttaatgtgaaaat
tctaaatttacgtcttgattcgcgaaagtttatgctcgcggaaaatattt
ttccgttaaattcgcgaattttcgtcctcgcgaaagtttgtacgcctaaa
gtattacCTGCTAGGACACTGAGACACGCTATCACAATTAACCGTATTTC
CTTTATTGAGGGCCACCCTGCAATAAATAAATGCCCTGCTCTAAAGAACG
ACGCATCTgaaatgagaaaatttgaaaagtgcCTGCTC

Coding sequence (CDS) from alignment at scaffold_3:95124..100811+

>TCONS_00057849 ID=TCONS_00057849|Name=TCONS_00057849|organism=Clytia hemisphaerica|type=CDS|length=6405bp|location=Sequence derived from alignment at scaffold_3:95124..100811+ (Clytia hemisphaerica)
GTAAACCTGACAGATTCGAAGATTTTTGAATGTAAATTTTTTGGAAGTCC
CATACCAGAAGTCTCATGGAAAAGCCCTAAATCTCAATTTATCATCAATG
ATACAATTGATAAagaaagttcaacgatcacgaGTCGATTGATTTTGACG
AATATTTCTTGGTATGACCAAGGACCTGTAAAATGCAACGCAAAGAGCTT
GCTTGGAGAAGACTCTGGTTATGGAAACTTGTCAACTTTATCGAAACCTG
TCATCAGTATGAACAAAAAATTGGTTTTCGCACCAGAGAGGATCAACTTT
ACATTTCCAGAATGCAAAGTTCGTTCCAATCCAACAGCGAAAGTGACGTG
GAAACGAATTTTTTGGTCGATGCCAGCTGGACGTGTTCATGTCCGAGAAA
ACACATTGACGATCAACCATGTTCAATATTCGGACGAAGGTTTCTATGTC
TGCGAGGCTGATAATTTCCTAGgaaaagataaaaagacTATTCAATTGAA
AATCAAGCCTTTTGAAATGCACCAAACTTCGGCATCGAAAATCTATATTC
CATCAGGCGAAAATGCAACAATATCGTGTTCAGCATACGGAAATAACCAT
GAGATGACCGGAACAATCACGAAATCCGGAGAAAAGATTTCATCAAAAGA
GGAACAGAAGACAGGGAATCTCTTTGAGGTGAAAGCGAATGTTACAAGTG
AGGGGACCTACCTTTGCACGattgaaaatagaaaagagAAGGCCGAAAGC
GCAACACTCGTCAAACACTTCAAACTATCATCCAGTCTCCTTAGCAGCGC
TCAACAATCACTTGTCGGAAGAGAGTTGAGAAAGATCAATAAAATTGGGA
AATACAAGAAATGTTTTGGATTGAGTTTACCCTCCACTACTTTTTACACT
TCCTGTGGTGGTAAAAAAGACACCATTACCTTCTTCAGAATTAAAGACAT
GTATAAAAGAAATCGGTACGGTAGTCGATATTACGCTTGGGGAAGCCGCT
ACATTGGAGGATTCACTGATCTGCCATGGCAAAAAGacaACCAGATGGAG
TACAGCAACTTAACAGCATTATTCGACCTCAGCAACCAAAGAATTTATCC
CAGCATCGAAGGAAGAGAAGCAGTTTGTTACCACGATGGTTACGGCCCTT
GTTTTGGAAATAAGGACTTGTATGTTGCAAGTGATGGGAAAATCTACAGA
TCAAGCTTAGGGAGTAGCTTCAATCCAAAACCAACATTTAATCAAAAAGA
GGTTCAATTCGAGACATTTTATCTGATGTAAGTAAACCTGACAGATTCGA
AGATTTTTGAATGTAAATTTTTTGGAAGTCCCATACCAGAAGTCTCATGG
AAAAGCCCTAAATCTCAATTTATCATCAATGATACAATTGATAAagaaag
ttcaacgatcacgaGTCGATTGATTTTGACGAATATTTCTTGGTATGACC
AAGGACCTGTAAAATGCAACGCAAAGAGCTTGCTTGGAGAAGACTCTGGT
TATGGAAACTTGTCAACTTTATCGAAACCTGTCATCAGTATGAACAAAAA
ATTGGTTTTCGCACCAGAGAGGATCAACTTTACATTTCCAGAATGCAAAG
TTCGTTCCAATCCAACAGCGAAAGTGACGTGGAAACGAATTTTTTGGTCG
ATGCCAGCTGGACGTGTTCATGTCCGAGAAAACACATTGACGATCAACCA
TGTTCAATATTCGGACGAAGGTTTCTATGTCTGCGAGGCTGATAATTTCC
TAGgaaaagataaaaagacTATTCAATTGAAAATCAAGCCTTTTGAAATG
CACCAAACTTCGGCATCGAAAATCTATATTCCATCAGGCGAAAATGCAAC
AATATCGTGTTCAGCATACGGAAATAACCATGAGATGACCGGAACAATCA
CGAAATCCGGAGAAAAGATTTCATCAAAAGAGGAACAGAAGACAGGGAAT
CTCTTTGAGGTGAAAGCGAATGTTACAAGTGAGGGGACCTACCTTTGCAC
GattgaaaatagaaaagagAAGGCCGAAAGCGCAACACTCGTCAAACACT
TCAAACTATCATCCAGTCTCCTTAGCAGCGCTCAACAATCACTTGTCGGA
AGAGAGTTGAGAAAGATCAATAAAATTGGGAAATACAAGAAATGTTTTGG
ATTGAGTTTACCCTCCACTACTTTTTACACTTCCTGTGGTGGTAAAAAAG
ACACCATTACCTTCTTCAGAATTAAAGACATGTATAAAAGAAATCGGTAC
GGTAGTCGATATTACGCTTGGGGAAGCCGCTACATTGGAGGATTCACTGA
TCTGCCATGGCAAAAAGacaACCAGATGGAGTACAGCAACTTAACAGCAT
TATTCGACCTCAGCAACCAAAGAATTTATCCCAGCATCGAAGGAAGAGAA
GCAGTTTGTTACCACGATGGTTACGGCCCTTGTTTTGGAAATAAGGACTT
GTATGTTGCAAGTGATGGGAAAATCTACAGATCAAGCTTAGGGAGTAGCT
TCAATCCAAAACCAACATTTAATCAAAAAGAGGTTCAATTCGAGACATTT
TATCTGATGTAAGTAAACCTGACAGATTCGAAGATTTTTGAATGTAAATT
TTTTGGAAGTCCCATACCAGAAGTCTCATGGAAAAGCCCTAAATCTCAAT
TTATCATCAATGATACAATTGATAAagaaagttcaacgatcacgaGTCGA
TTGATTTTGACGAATATTTCTTGGTATGACCAAGGACCTGTAAAATGCAA
CGCAAAGAGCTTGCTTGGAGAAGACTCTGGTTATGGAAACTTGTCAACTT
TATCGAAACCTGTCATCAGTATGAACAAAAAATTGGTTTTCGCACCAGAG
AGGATCAACTTTACATTTCCAGAATGCAAAGTTCGTTCCAATCCAACAGC
GAAAGTGACGTGGAAACGAATTTTTTGGTCGATGCCAGCTGGACGTGTTC
ATGTCCGAGAAAACACATTGACGATCAACCATGTTCAATATTCGGACGAA
GGTTTCTATGTCTGCGAGGCTGATAATTTCCTAGgaaaagataaaaagac
TATTCAATTGAAAATCAAGCCTTTTGAAATGCACCAAACTTCGGCATCGA
AAATCTATATTCCATCAGGCGAAAATGCAACAATATCGTGTTCAGCATAC
GGAAATAACCATGAGATGACCGGAACAATCACGAAATCCGGAGAAAAGAT
TTCATCAAAAGAGGAACAGAAGACAGGGAATCTCTTTGAGGTGAAAGCGA
ATGTTACAAGTGAGGGGACCTACCTTTGCACGattgaaaatagaaaagag
AAGGCCGAAAGCGCAACACTCGTCAAACACTTCAAACTATCATCCAGTCT
CCTTAGCAGCGCTCAACAATCACTTGTCGGAAGAGAGTTGAGAAAGATCA
ATAAAATTGGGAAATACAAGAAATGTTTTGGATTGAGTTTACCCTCCACT
ACTTTTTACACTTCCTGTGGTGGTAAAAAAGACACCATTACCTTCTTCAG
AATTAAAGACATGTATAAAAGAAATCGGTACGGTAGTCGATATTACGCTT
GGGGAAGCCGCTACATTGGAGGATTCACTGATCTGCCATGGCAAAAAGac
aACCAGATGGAGTACAGCAACTTAACAGCATTATTCGACCTCAGCAACCA
AAGAATTTATCCCAGCATCGAAGGAAGAGAAGCAGTTTGTTACCACGATG
GTTACGGCCCTTGTTTTGGAAATAAGGACTTGTATGTTGCAAGTGATGGG
AAAATCTACAGATCAAGCTTAGGGAGTAGCTTCAATCCAAAACCAACATT
TAATCAAAAAGAGGTTCAATTCGAGACATTTTATCTGATGTAAGTAAACC
TGACAGATTCGAAGATTTTTGAATGTAAATTTTTTGGAAGTCCCATACCA
GAAGTCTCATGGAAAAGCCCTAAATCTCAATTTATCATCAATGATACAAT
TGATAAagaaagttcaacgatcacgaGTCGATTGATTTTGACGAATATTT
CTTGGTATGACCAAGGACCTGTAAAATGCAACGCAAAGAGCTTGCTTGGA
GAAGACTCTGGTTATGGAAACTTGTCAACTTTATCGAAACCTGTCATCAG
TATGAACAAAAAATTGGTTTTCGCACCAGAGAGGATCAACTTTACATTTC
CAGAATGCAAAGTTCGTTCCAATCCAACAGCGAAAGTGACGTGGAAACGA
ATTTTTTGGTCGATGCCAGCTGGACGTGTTCATGTCCGAGAAAACACATT
GACGATCAACCATGTTCAATATTCGGACGAAGGTTTCTATGTCTGCGAGG
CTGATAATTTCCTAGgaaaagataaaaagacTATTCAATTGAAAATCAAG
CCTTTTGAAATGCACCAAACTTCGGCATCGAAAATCTATATTCCATCAGG
CGAAAATGCAACAATATCGTGTTCAGCATACGGAAATAACCATGAGATGA
CCGGAACAATCACGAAATCCGGAGAAAAGATTTCATCAAAAGAGGAACAG
AAGACAGGGAATCTCTTTGAGGTGAAAGCGAATGTTACAAGTGAGGGGAC
CTACCTTTGCACGattgaaaatagaaaagagAAGGCCGAAAGCGCAACAC
TCGTCAAACACTTCAAACTATCATCCAGTCTCCTTAGCAGCGCTCAACAA
TCACTTGTCGGAAGAGAGTTGAGAAAGATCAATAAAATTGGGAAATACAA
GAAATGTTTTGGATTGAGTTTACCCTCCACTACTTTTTACACTTCCTGTG
GTGGTAAAAAAGACACCATTACCTTCTTCAGAATTAAAGACATGTATAAA
AGAAATCGGTACGGTAGTCGATATTACGCTTGGGGAAGCCGCTACATTGG
AGGATTCACTGATCTGCCATGGCAAAAAGacaACCAGATGGAGTACAGCA
ACTTAACAGCATTATTCGACCTCAGCAACCAAAGAATTTATCCCAGCATC
GAAGGAAGAGAAGCAGTTTGTTACCACGATGGTTACGGCCCTTGTTTTGG
AAATAAGGACTTGTATGTTGCAAGTGATGGGAAAATCTACAGATCAAGCT
TAGGGAGTAGCTTCAATCCAAAACCAACATTTAATCAAAAAGAGGTTCAA
TTCGAGACATTTTATCTGATGTAAGTAAACCTGACAGATTCGAAGATTTT
TGAATGTAAATTTTTTGGAAGTCCCATACCAGAAGTCTCATGGAAAAGCC
CTAAATCTCAATTTATCATCAATGATACAATTGATAAagaaagttcaacg
atcacgaGTCGATTGATTTTGACGAATATTTCTTGGTATGACCAAGGACC
TGTAAAATGCAACGCAAAGAGCTTGCTTGGAGAAGACTCTGGTTATGGAA
ACTTGTCAACTTTATCGAAACCTGTCATCAGTATGAACAAAAAATTGGTT
TTCGCACCAGAGAGGATCAACTTTACATTTCCAGAATGCAAAGTTCGTTC
CAATCCAACAGCGAAAGTGACGTGGAAACGAATTTTTTGGTCGATGCCAG
CTGGACGTGTTCATGTCCGAGAAAACACATTGACGATCAACCATGTTCAA
TATTCGGACGAAGGTTTCTATGTCTGCGAGGCTGATAATTTCCTAGgaaa
agataaaaagacTATTCAATTGAAAATCAAGCCTTTTGAAATGCACCAAA
CTTCGGCATCGAAAATCTATATTCCATCAGGCGAAAATGCAACAATATCG
TGTTCAGCATACGGAAATAACCATGAGATGACCGGAACAATCACGAAATC
CGGAGAAAAGATTTCATCAAAAGAGGAACAGAAGACAGGGAATCTCTTTG
AGGTGAAAGCGAATGTTACAAGTGAGGGGACCTACCTTTGCACGattgaa
aatagaaaagagAAGGCCGAAAGCGCAACACTCGTCAAACACTTCAAACT
ATCATCCAGTCTCCTTAGCAGCGCTCAACAATCACTTGTCGGAAGAGAGT
TGAGAAAGATCAATAAAATTGGGAAATACAAGAAATGTTTTGGATTGAGT
TTACCCTCCACTACTTTTTACACTTCCTGTGGTGGTAAAAAAGACACCAT
TACCTTCTTCAGAATTAAAGACATGTATAAAAGAAATCGGTACGGTAGTC
GATATTACGCTTGGGGAAGCCGCTACATTGGAGGATTCACTGATCTGCCA
TGGCAAAAAGacaACCAGATGGAGTACAGCAACTTAACAGCATTATTCGA
CCTCAGCAACCAAAGAATTTATCCCAGCATCGAAGGAAGAGAAGCAGTTT
GTTACCACGATGGTTACGGCCCTTGTTTTGGAAATAAGGACTTGTATGTT
GCAAGTGATGGGAAAATCTACAGATCAAGCTTAGGGAGTAGCTTCAATCC
AAAACCAACATTTAATCAAAAAGAGGTTCAATTCGAGACATTTTATCTGA
TGTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_036468	XLOC_036468	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00057849-protein	TCONS_00057849-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_3	supercontig	scaffold_3:95124..100811 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0209259	0	0.0719056	0.046848	0.194962	0.110475	0.186792	0.0998355	0.174822	0.390063	0.33599	0.180297	1.75268	1.64356	11.3472	16.5014	1.19629	1.38396	0.737711	0.5083	0.281936	0.237983	0.619443	0.648011	0.845125	0.67278	0.371583	0.365312	6.122	4.23706

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR003599	Ig_sub
IPR003598	Ig_sub2
IPR013783	Ig-like_fold
IPR013098	Ig_I-set
IPR006571	TLDc_dom
IPR007110	Ig-like_dom

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00057849 vs. Swiss-Prot (Human)

BLAST of TCONS_00057849 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00057849 (transcript) - C. hemisphaerica