TCONS_00060262 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060262
Unique NameTCONS_00060262
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1767

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060262 ID=TCONS_00060262|Name=TCONS_00060262|organism=Clytia hemisphaerica|type=transcript|length=1767bp
AGATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTTCATCAA
GGGGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTACAGTTGG
ATACGGCGATATATGTCCAAAGACGAAACCTGGTCGTATATTCAGCATTG
TATGGGTGATCACAGGAGTTGCAAGCTGTGCATTATTCACGTCCTACATG
ACGACGGTTTTGACGTCCATTTGTATGACGGAAGACGTGTCTCTGACGGC
AACCAAgGTTGGCGTCCTAACTGAAAGCGAAGAACATCGGTTTGCCATGA
AACGAAATTCAATGCCTCAAGCATTTCCAACGATAAATGAAGTCATAGAT
GCTTTAAAACGCCGTGAAGTTCGTGGTATCTTAATCGATAGTTACATAGC
AGCCGAATATGAAGAACAACTGAAATCGTTCAAGAGACAAATGGTCATTG
AATATATCACAAGTTATGGTGTGGTGTTTTTAAACGAAGGTGTTCGCTTC
TCAGATTGTGTGCGAGATTATGTGTTTTCAAGACAGAATGAAATATCAGA
GATTATACGACAGAACGTACAATTATTAGAGGTTTCCACGACGAGTGCTG
CAGCAGAGAAATCGAACAATTTGATTGATGTTAAGAGTCCTTCATTTTTC
TATATCGTAACTGGTGTGATTGGAATATTAGTGGTGGCAGCTTTCTTTGG
CACGATATGGGATATTAGAAAAAGACAAATGGAAAAACtgaagAAGTACA
ACCCCCACGAAGATATTTCTCTGTCCGAATGGCGTGCACGTTATAAATGT
GACTTTCAACAGGTGTTGGAAGACATGCAAGGGGAATGTACAAGCATAAG
TGATAAATGTACTTCTATACTTAAACAACTTCAAAGTAGTAATGGGATTG
TATGTTTACGGAAAAAACGTTCGGATGATATGAGGATTGAGTATGACTAC
TAGTCCAAACACAACGTTGTGCCTAGCGCCCAGTGACGTCGAATCGACAG
TTAGGAGACGGTAGAATGTCTGTAAGGAATGAAAccacgttcacacgcta
cggttccgtttcatttcgaaacaaaatgaagccattctattggtgaattc
aagttttacgtcatttctaaccaatagaatggcttcacttcgtttcggag
cgaaacgggaCCGTTACCTGCGAACATGGTCTGAGTTTGCGTATCATTCC
TTGAGAAATCAATTCATGGTATTCATTTCGTAATGATTTCTATGGAAAca
accggtttttgccagtaatgGCAAACTTTTAACAACTTTTCTCGAAGAAG
TGAAGACGTCAACGATATTGTACCTCTCGGATACAACCGTCAGCTATTGA
TTTTTACAATAGAGAAATACCGATGTTGGTTTATTCTCGATTAACCATCA
ACCACGTTCCTTGAGGTGGAAATTTGGTCAGCATTTTAAGCAagaaattt
tatggagaatcgaccataaaaatgtttttctaaaatatgtGTTAGTATAC
CAATGTAAGTTTTTTAAGAATTGTATTAAATAGCTCGGACATCCTTTTGG
ATTTGTCCATTAAACAATTACATGCGAAATGGGAGGTTTTAAGATAGCAT
ATAAATAATATTAATCTGCTGGCTCATAGCCCAAAACTACATGAATGGAT
CAGGCTCTCCATAAAAATGGTACCGTGTCCAGTTTTAGAGCTGATTAGTC
CGCCTTCTTGTTTCAATTCTGGTCGCACACAGCCCGATTTAAATGTTTAG
AAATTCGAGCGTTCGAA
Run BLAST on NCBI

protein sequence of TCONS_00060262-protein

>TCONS_00060262-protein ID=TCONS_00060262-protein|Name=TCONS_00060262-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
MISLSLDGEEYPAFHQGVWAGIWWAFVSMTTVGYGDICPKTKPGRIFSIV
WVITGVASCALFTSYMTTVLTSICMTEDVSLTATKVGVLTESEEHRFAMK
RNSMPQAFPTINEVIDALKRREVRGILIDSYIAAEYEEQLKSFKRQMVIE
YITSYGVVFLNEGVRFSDCVRDYVFSRQNEISEIIRQNVQLLEVSTTSAA
AEKSNNLIDVKSPSFFYIVTGVIGILVVAAFFGTIWDIRKRQMEKLKKYN
PHEDISLSEWRARYKCDFQQVLEDMQGECTSISDKCTSILKQLQSSNGIV
CLRKKRSDDMRIEYDY
Run BLAST on NCBI

transcript from alignment at scaffold_339:111208..117314-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060262 ID=TCONS_00060262|Name=TCONS_00060262|organism=Clytia hemisphaerica|type=transcript|length=6107bp|location=Sequence derived from alignment at scaffold_339:111208..117314- (Clytia hemisphaerica)
AGATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTTCATCAA
GGGGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTACAGTTGG
GTGAGTTAATTAAGTTACATTCTTGAGTTATAGTTTTTTAGTAGAAGTGT
GGAGTCTTTTCACCTTTTCACCACAAGATAATTTCTGACTTATACTTTTG
TTTTTACAAAAGTAAATATTCCACAGATTGAACTTTAACTTAAAACATAT
TTTCTAGTTCTTGTAATCAATAATTTAGTTGAAATTGGCGTTGGAGTTGG
TTCTGGCGGAACCAGCACTTTAAAATAGCAATCAAATAAAGCTTCCATAT
TTTCGGAAAAAAGTAGGGGGAGGGGTATTTAATCGAATTTGAAAATCCAA
AATGCATTTTGAGACTAAAACCCACATCAAAGAATGAAAGNTTCTATATA
TGCTCTAATTGTAGGTAGCTTTTTCACCCTCGATTAAAATCACAACTTTG
ACCTGTTGTCGAGTGTGACGATAGTGTATATTGCCAAGTTAAATTATATT
CCTGTATCATAATAAGCTCTTTAATCAAAGAGGTCTCATTTTTTTAGTAA
CTTCTTTTCAATATAGTCATACTCCATTCGATGATAACAATCACTTTATG
TTGAATTTAACTTTGAAAAATTGTCAATTTTTCCCTTATTTGGGGGTTAC
GAGTTTTGCGAATAACGTCATAGTTTCTGGCCGCAAAAACTTTTGCCAGG
CCTAATTCGCGGGTCCCTTACCTCTCAAAAAAGTCTCAATATCCTTTCGA
ACCAATCACATGAGATTGCGTCCTAAGAAAGACGCTAGCATCCTAAAGGT
TGGCCACCTACCAATACAAAACTTTTTAGAGATTTTTCCCCATTCTTCCA
TATAGAACTCGTAGACTGGCCTTAGTAAAGCACAGCAATCTGATGTCTTG
TTAGCTTTGGTCTGAATCTCTCTTTGTTTGACTTGATCATTTGACTTGCT
TTCAGGAGATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTT
CATCAAGGGGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTAC
AGTTGGGTGAGTTAATTAAGTTACATTCTTGAGTTATAGTTTTTTAGTAG
AAGTGTGGAGTCTTTTCACCTTTTCACCACAAGATAATTTCTGACTTATA
CTTTTGTTTTTACAAAAGTAAATATTCCACAGATTGAACTTTAACTTAAA
ACATATTTTCTAGTTCTTGTAATCAATAATTTAGTTGAAATTGGCGTTGG
AGTTGGTTCTGGCGGAACCAGCACTTTAAAATAGCAATCAAATAAAGCTT
CCATATTTTCGGAAAAAAGTAGGGGGAGGGGTATTTAATCGAATTTGAAA
ATCCAAAATGCATTTTGAGACTAAAACCCACATCAAAGAATGAAAGACTT
GAGACCTGAAACTTTCATTTCTAGATACGGCGATATATGTCCAAAGACGA
AACCTGGTCGTATATTCAGCATTGTATGGGTGATCACAGGAGTTGCAAGC
TGTGCATTATTCACGTCCTACATGACGACGGTTTTGACGTCCATTTGTAT
GACGGAAGACGTGTCTCTGACGGCAACCAAGGTAAAAACAACAAATAACA
CTCCATTCACACACTAAAAATTTGTTTTTATTCGAACTCTTGAGCATTGA
TTTCCTTTGAGCTGTTTGGTCAACCTTTTTGTAAAAAAGTTTCTTTATAA
TTGTTGAATGATGGCCGATTGGTTTGAAGTGCCGACTGTTCCTTTCAGTC
TAAGGAAAGCACAAAAGATTCACAAAGGATATTGGGAAAACAACCAAAAG
TCGGCGAGTCCAAGAATACTGCACTATTCACGGCAAAATATCGATTGCAT
CAGACAGCTTTAGAGAGTAAATAGAAAAAAGTGGTTATATAAGGTTCAGA
AAGAGGTGTCTGTTATGAAGGAACGCCCTCTTTAAACCTTTTGAATCTCC
TTTCCCAATTTCTTTTAGGTTGGCGTCCTAACTGAAAGCGAAGAACATCG
GTTTGCCATGAAACGAAATTCAATGCCTCAAGGTAAATCCTTCCTTATTT
CCTGAAAGAGCCAAAGGCGTTCAAAAGAGTTCAATGATAGTAACAATATA
TAGGTCATTTAAAGATTTTGAGAGTTTTAAAAGGATTTCTGAGTTTTCTA
AACCAAGCTACAATGGTGGAACAAAGGTTTGTAAAACTTTTAAAAAAATC
CCTAAAAGTGTCAATCTTTTTCACACTTGGGGAAATTCATTGGCAGAAAA
TATCAATATGCTTGCCAGGAGTCCTTATGACTTCAGTCCGTATGATTTTT
GGACTTCCAAGACTTCCAAGGACTGAAAATGGGTGAACCTCGGCCACACA
GATTGTAGGTGCACCAGAGAGCTCTGAAAAGTTGTTTTTCATGAAGGAAC
CTCCTCAAATATGGTCTAGTTAGTTGTTTTCTCGAAGGAGATGAAGAGGA
AAACTCGTCGAGTCTTCAATCTCAGACCAAAAAAGGCCTGAAGGTGACGA
CATTCATTTCCTTCAATATTGTGTGGATCAAAAAAACATCATTGGCTTTA
TTTCATGGATTTTTGAAAAGTCTACAATCTTTTGCCCATGGTTGTAGCTA
TGAAAGTTGCACCGTCTTTTAACCTCTGTTGGGCAAATCAATATATTTGT
AGCATTTCCAACGATAAATGAAGTCATAGATGCTTTAAAACGCCGTGAAG
TTCGTGGTATCTTAATCGATAGTTACATAGCAGCCGAATATGAAGAACAA
CTGAAATCGTTCAAGAGACAAATGGTCATTGAATATATCACAAGTTATGG
TGTGGTGTTTTTAAACGAAGGTGTTCGCTTCTCAGATTGTGTGCGAGATT
ATGTGTTTTCAAGACAGAATGAAATATCAGAGATTATACGACAGAACGTA
CAATTATTAGAGGTATGTAGGTTCTCTTCCTTCCATGGGTTATTGCGATA
AAAGTACTAATCTTGCCACAGATACATGACTTGTGGCTCAACTTTCAGGA
GGCAAAAAGATTAGAACAGGGTCAGAGGCGTCTAATGTTCACAAAGTTCA
TAGTTACTGTGCTGGTATAATATCAGGGTTGGTCAAAGCAAAATTTTTAG
AAAATGAGCTAGAATGTTAAGCAACCTCAGGTCTGACCCGAAAACTCTTC
GAGCATCTTCCTATTTTTTACTAGGGGAAGCATCTTGGGGGTCAAAGAAT
ATGGCTTAATTGTTTTATTCTTGGATAATGATAATGATTCATTGGGATCA
CGTCGAAATTTCACCGAAGAAAAATGTTGTGCTATAATTCTTTTATTAGG
TTTCCACGACGAGTGCTGCAGCAGAGAAATCGAACAATTTGATTGATGTT
AAGAGTCCTTCATTTTTCTATATCGTAACTGGTGTGATTGGAATATTAGT
GGTGGCAGCTTTCTTTGGCACGATATGGGATATTAGAAAAAGACAAATGG
AAAAACGTGAGTATTGTACAAATGAAGTAAAAGCCCGAATGGTTAGAAGC
GAATCTTTAACCTTTCTTAGCCAAGCAAAAGCGAAGCCTTAGAATATACG
CCGTATTTTTGACTATGGATTAAATTTAGCGGTTTCTTTGTTTTCGAGTG
GTATATTTTTTGAAATCTGGCGAAAAAGTTTACTTTCAATCTGAAATTTG
TACAAAAACCACGCGGGCCGCTCAAGGATTTGGGGATTTAGCGGCTTCAA
ATCCTACGTAGGAGGGATTTATGCAATGAATACAGATAAAAGTTATCAAA
GAGCTAAAAAAAAACATACGTCAAAGAACTTCGGGGTATAATTTTTTCTC
TGTAACAGTGCGATCAACGGAATCAATCCGGTACAGCTATTAGGGTGTTT
GGAACTGTTTTAAGATTAGTTGTTGCAAGTAGAAATGAATGAAATGTAAT
TAAGAAGAGAAAATTACATTAATTGGTTGTGGACAATTAACCAGTTAATA
TCTAAGAATATCTATGAAAATTATCCCATTCTCACATAACCTTCGATAGC
TCAGTTGGTAGAGCGGAGGACTGTAGATGTGAATGAGCAGATATCCTTAG
GTCGCTGGTTCAAATCCGGCTCGAAGGACTAATTTTCTATGATTTTTTTT
TCTAACGAGATTTCTTTTTCACTTGGTGTATATCAGATTCTTTCATATTG
GAAGTTTATCGTGGCTTGGATCACGAGATTTACGTTTGGCTACGTTTCGA
GAGATTCTTCTCCCATCATCGGATCCTTTCATCTTTTTAATAAAGAGTCA
AATACAGAATTTAAGAACCTTTTATGATGGTAATACAGCAGCAAATTTTC
TTAAACCTAACTAAAAAGAAATACAAAAAGGCCACTCACAACATCTTTTG
ACTCTCCGTTCGAATCTGGTGGTACGTTTTTAGATAGAAAGCATTGATAT
TTAACGTGGAACAATGAGAACTGGTGACTGCTATTTTCAGCAATCTTTAG
CTGTAGCTATTTTTGATTTGTCAAAAACAGTTCCAATGACAACACGAGTG
ATCTATCCCACTTTTCCGGCCTAACCAACCTGGTCGACTCTAAGTGACGA
CACCACATCGATTGCTTCAATTGATCTTTAAAGATGACATCGTGGAGATC
GAATTAAGCTTGACAAACAATTCAGATTACAGGAAGCTTGGCCGAGCAAA
TAGAAATATTGATAACGGCTCTCGACTTCGAAAATACAAAAAACAACAGA
AATTTGAACACTGAGTTTCTGCTGGTTTTAATACACGTTTTTTTTATAAG
AACAAACTATATAAGAACATAAGGCTTCGCTGGCCAAAATGTTAAGAACA
AGTTAAGAAGATTTAAGACTTTGTGGACTGAAAAACACCCTATTTCTTAG
GAAAATGGTCAAAAATATTCAAAAAAATGGTCAAAGTAAGAACATGTTAA
GAACATTATTAGGCTTAAAACTCAAAAAGTTATTGAGAACATCCAAAGGC
TTCAAAAATTTTGGATGCTCTTATAAAAAAATGTGTACTGGCTTTGATAA
TTGGTATTCTCCTTTTTTTCATTTTCAGTGAAGAAGTACAACCCCCACGA
AGATATTTCTCTGTCCGAATGGCGTGCACGTTATAAATGTGACTTTCAAC
AGGTGTTGGAAGACATGCAAGGGGAATGTACAAGCATAAGTGATAAATGT
ACTTCTATACTTAAACAACTTCAAAGTAGTAATGGGATTGTATGTTTACG
GAAAAAACGTTCGGATGATATGAGGATTGAGTATGACTACTAGTCCAAAC
ACAACGTTGTGCCTAGCGCCCAGTGACGTCGAATCGACAGTTAGGAGACG
GTAGAATGTCTGTAAGGAATGAAACCACGTTCACACGCTACGGTTCCGTT
TCATTTCGAAACAAAATGAAGCCATTCTATTGGTGAATTCAAGTTTTACG
TCATTTCTAACCAATAGAATGGCTTCACTTCGTTTCGGAGCGAAACGGGA
CCGTTACCTGCGAACATGGTCTGAGTTTGCGTATCATTCCTTGAGAAATC
AATTCATGGTATTCATTTCGTAATGATTTCTATGGAAACAACCGGTTTTT
GCCAGTAATGGCAAACTTTTAACAACTTTTCTCGAAGAAGTGAAGACGTC
AACGATATTGTACCTCTCGGATACAACCGTCAGCTATTGATTTTTACAAT
AGAGAAATACCGATGTTGGTTTATTCTCGATTAACCATCAACCACGTTCC
TTGAGGTGGAAATTTGGTCAGCATTTTAAGCAAGAAATTTTATGGAGAAT
CGACCATAAAAATGTTTTTCTAAAATATGTGTTAGTATACCAATGTAAGT
TTTTTAAGAATTGTATTAAATAGCTCGGACATCCTTTTGGATTTGTCCAT
TAAACAATTACATGCGAAATGGGAGGTTTTAAGATAGCATATAAATAATA
TTAATCTGCTGGCTCATAGCCCAAAACTACATGAATGGATCAGGCTCTCC
ATAAAAATGGTACCGTGTCCAGTTTTAGAGCTGATTAGTCCGCCTTCTTG
TTTCAATTCTGGTCGCACACAGCCCGATTTAAATGTTTAGAAATTCGAGC
GTTCGAA

Coding sequence (CDS) from alignment at scaffold_339:111208..117314-

>TCONS_00060262 ID=TCONS_00060262|Name=TCONS_00060262|organism=Clytia hemisphaerica|type=CDS|length=5706bp|location=Sequence derived from alignment at scaffold_339:111208..117314- (Clytia hemisphaerica)
TGAAGAAGTACAACCCCCACGAAGATATTTCTCTGTCCGAATGGCGTGCA
CGTTATAAATGTGACTTTCAACAGGTGTTGGAAGACATGCAAGGGGAATG
TACAAGCATAAGTGATAAATGTACTTCTATACTTAAACAACTTCAAAGTA
GTAATGGGATTGTATGTTTACGGAAAAAACGTTCGGATGATATGAGGATT
GAGTATGACTACTAGGTTTCCACGACGAGTGCTGCAGCAGAGAAATCGAA
CAATTTGATTGATGTTAAGAGTCCTTCATTTTTCTATATCGTAACTGGTG
TGATTGGAATATTAGTGGTGGCAGCTTTCTTTGGCACGATATGGGATATT
AGAAAAAGACAAATGGAAAAACCATTTCCAACGATAAATGAAGTCATAGA
TGCTTTAAAACGCCGTGAAGTTCGTGGTATCTTAATCGATAGTTACATAG
CAGCCGAATATGAAGAACAACTGAAATCGTTCAAGAGACAAATGGTCATT
GAATATATCACAAGTTATGGTGTGGTGTTTTTAAACGAAGGTGTTCGCTT
CTCAGATTGTGTGCGAGATTATGTGTTTTCAAGACAGAATGAAATATCAG
AGATTATACGACAGAACGTACAATTATTAGAGGTTGGCGTCCTAACTGAA
AGCGAAGAACATCGGTTTGCCATGAAACGAAATTCAATGCCTCAAGATAC
GGCGATATATGTCCAAAGACGAAACCTGGTCGTATATTCAGCATTGTATG
GGTGATCACAGGAGTTGCAAGCTGTGCATTATTCACGTCCTACATGACGA
CGGTTTTGACGTCCATTTGTATGACGGAAGACGTGTCTCTGACGGCAACC
AAGATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTTCATCA
AGGGGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTACAGTTG
GTGAAGAAGTACAACCCCCACGAAGATATTTCTCTGTCCGAATGGCGTGC
ACGTTATAAATGTGACTTTCAACAGGTGTTGGAAGACATGCAAGGGGAAT
GTACAAGCATAAGTGATAAATGTACTTCTATACTTAAACAACTTCAAAGT
AGTAATGGGATTGTATGTTTACGGAAAAAACGTTCGGATGATATGAGGAT
TGAGTATGACTACTAGGTTTCCACGACGAGTGCTGCAGCAGAGAAATCGA
ACAATTTGATTGATGTTAAGAGTCCTTCATTTTTCTATATCGTAACTGGT
GTGATTGGAATATTAGTGGTGGCAGCTTTCTTTGGCACGATATGGGATAT
TAGAAAAAGACAAATGGAAAAACCATTTCCAACGATAAATGAAGTCATAG
ATGCTTTAAAACGCCGTGAAGTTCGTGGTATCTTAATCGATAGTTACATA
GCAGCCGAATATGAAGAACAACTGAAATCGTTCAAGAGACAAATGGTCAT
TGAATATATCACAAGTTATGGTGTGGTGTTTTTAAACGAAGGTGTTCGCT
TCTCAGATTGTGTGCGAGATTATGTGTTTTCAAGACAGAATGAAATATCA
GAGATTATACGACAGAACGTACAATTATTAGAGGTTGGCGTCCTAACTGA
AAGCGAAGAACATCGGTTTGCCATGAAACGAAATTCAATGCCTCAAGATA
CGGCGATATATGTCCAAAGACGAAACCTGGTCGTATATTCAGCATTGTAT
GGGTGATCACAGGAGTTGCAAGCTGTGCATTATTCACGTCCTACATGACG
ACGGTTTTGACGTCCATTTGTATGACGGAAGACGTGTCTCTGACGGCAAC
CAAGATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTTCATC
AAGGGGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTACAGTT
GGTGAAGAAGTACAACCCCCACGAAGATATTTCTCTGTCCGAATGGCGTG
CACGTTATAAATGTGACTTTCAACAGGTGTTGGAAGACATGCAAGGGGAA
TGTACAAGCATAAGTGATAAATGTACTTCTATACTTAAACAACTTCAAAG
TAGTAATGGGATTGTATGTTTACGGAAAAAACGTTCGGATGATATGAGGA
TTGAGTATGACTACTAGGTTTCCACGACGAGTGCTGCAGCAGAGAAATCG
AACAATTTGATTGATGTTAAGAGTCCTTCATTTTTCTATATCGTAACTGG
TGTGATTGGAATATTAGTGGTGGCAGCTTTCTTTGGCACGATATGGGATA
TTAGAAAAAGACAAATGGAAAAACCATTTCCAACGATAAATGAAGTCATA
GATGCTTTAAAACGCCGTGAAGTTCGTGGTATCTTAATCGATAGTTACAT
AGCAGCCGAATATGAAGAACAACTGAAATCGTTCAAGAGACAAATGGTCA
TTGAATATATCACAAGTTATGGTGTGGTGTTTTTAAACGAAGGTGTTCGC
TTCTCAGATTGTGTGCGAGATTATGTGTTTTCAAGACAGAATGAAATATC
AGAGATTATACGACAGAACGTACAATTATTAGAGGTTGGCGTCCTAACTG
AAAGCGAAGAACATCGGTTTGCCATGAAACGAAATTCAATGCCTCAAGAT
ACGGCGATATATGTCCAAAGACGAAACCTGGTCGTATATTCAGCATTGTA
TGGGTGATCACAGGAGTTGCAAGCTGTGCATTATTCACGTCCTACATGAC
GACGGTTTTGACGTCCATTTGTATGACGGAAGACGTGTCTCTGACGGCAA
CCAAGATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTTCAT
CAAGGGGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTACAGT
TGGTGAAGAAGTACAACCCCCACGAAGATATTTCTCTGTCCGAATGGCGT
GCACGTTATAAATGTGACTTTCAACAGGTGTTGGAAGACATGCAAGGGGA
ATGTACAAGCATAAGTGATAAATGTACTTCTATACTTAAACAACTTCAAA
GTAGTAATGGGATTGTATGTTTACGGAAAAAACGTTCGGATGATATGAGG
ATTGAGTATGACTACTAGGTTTCCACGACGAGTGCTGCAGCAGAGAAATC
GAACAATTTGATTGATGTTAAGAGTCCTTCATTTTTCTATATCGTAACTG
GTGTGATTGGAATATTAGTGGTGGCAGCTTTCTTTGGCACGATATGGGAT
ATTAGAAAAAGACAAATGGAAAAACCATTTCCAACGATAAATGAAGTCAT
AGATGCTTTAAAACGCCGTGAAGTTCGTGGTATCTTAATCGATAGTTACA
TAGCAGCCGAATATGAAGAACAACTGAAATCGTTCAAGAGACAAATGGTC
ATTGAATATATCACAAGTTATGGTGTGGTGTTTTTAAACGAAGGTGTTCG
CTTCTCAGATTGTGTGCGAGATTATGTGTTTTCAAGACAGAATGAAATAT
CAGAGATTATACGACAGAACGTACAATTATTAGAGGTTGGCGTCCTAACT
GAAAGCGAAGAACATCGGTTTGCCATGAAACGAAATTCAATGCCTCAAGA
TACGGCGATATATGTCCAAAGACGAAACCTGGTCGTATATTCAGCATTGT
ATGGGTGATCACAGGAGTTGCAAGCTGTGCATTATTCACGTCCTACATGA
CGACGGTTTTGACGTCCATTTGTATGACGGAAGACGTGTCTCTGACGGCA
ACCAAGATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTTCA
TCAAGGGGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTACAG
TTGGTGAAGAAGTACAACCCCCACGAAGATATTTCTCTGTCCGAATGGCG
TGCACGTTATAAATGTGACTTTCAACAGGTGTTGGAAGACATGCAAGGGG
AATGTACAAGCATAAGTGATAAATGTACTTCTATACTTAAACAACTTCAA
AGTAGTAATGGGATTGTATGTTTACGGAAAAAACGTTCGGATGATATGAG
GATTGAGTATGACTACTAGGTTTCCACGACGAGTGCTGCAGCAGAGAAAT
CGAACAATTTGATTGATGTTAAGAGTCCTTCATTTTTCTATATCGTAACT
GGTGTGATTGGAATATTAGTGGTGGCAGCTTTCTTTGGCACGATATGGGA
TATTAGAAAAAGACAAATGGAAAAACCATTTCCAACGATAAATGAAGTCA
TAGATGCTTTAAAACGCCGTGAAGTTCGTGGTATCTTAATCGATAGTTAC
ATAGCAGCCGAATATGAAGAACAACTGAAATCGTTCAAGAGACAAATGGT
CATTGAATATATCACAAGTTATGGTGTGGTGTTTTTAAACGAAGGTGTTC
GCTTCTCAGATTGTGTGCGAGATTATGTGTTTTCAAGACAGAATGAAATA
TCAGAGATTATACGACAGAACGTACAATTATTAGAGGTTGGCGTCCTAAC
TGAAAGCGAAGAACATCGGTTTGCCATGAAACGAAATTCAATGCCTCAAG
ATACGGCGATATATGTCCAAAGACGAAACCTGGTCGTATATTCAGCATTG
TATGGGTGATCACAGGAGTTGCAAGCTGTGCATTATTCACGTCCTACATG
ACGACGGTTTTGACGTCCATTTGTATGACGGAAGACGTGTCTCTGACGGC
AACCAAGATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTTC
ATCAAGGGGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTACA
GTTGGTGAAGAAGTACAACCCCCACGAAGATATTTCTCTGTCCGAATGGC
GTGCACGTTATAAATGTGACTTTCAACAGGTGTTGGAAGACATGCAAGGG
GAATGTACAAGCATAAGTGATAAATGTACTTCTATACTTAAACAACTTCA
AAGTAGTAATGGGATTGTATGTTTACGGAAAAAACGTTCGGATGATATGA
GGATTGAGTATGACTACTAGGTTTCCACGACGAGTGCTGCAGCAGAGAAA
TCGAACAATTTGATTGATGTTAAGAGTCCTTCATTTTTCTATATCGTAAC
TGGTGTGATTGGAATATTAGTGGTGGCAGCTTTCTTTGGCACGATATGGG
ATATTAGAAAAAGACAAATGGAAAAACCATTTCCAACGATAAATGAAGTC
ATAGATGCTTTAAAACGCCGTGAAGTTCGTGGTATCTTAATCGATAGTTA
CATAGCAGCCGAATATGAAGAACAACTGAAATCGTTCAAGAGACAAATGG
TCATTGAATATATCACAAGTTATGGTGTGGTGTTTTTAAACGAAGGTGTT
CGCTTCTCAGATTGTGTGCGAGATTATGTGTTTTCAAGACAGAATGAAAT
ATCAGAGATTATACGACAGAACGTACAATTATTAGAGGTTGGCGTCCTAA
CTGAAAGCGAAGAACATCGGTTTGCCATGAAACGAAATTCAATGCCTCAA
GATACGGCGATATATGTCCAAAGACGAAACCTGGTCGTATATTCAGCATT
GTATGGGTGATCACAGGAGTTGCAAGCTGTGCATTATTCACGTCCTACAT
GACGACGGTTTTGACGTCCATTTGTATGACGGAAGACGTGTCTCTGACGG
CAACCAAGATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTT
CATCAAGGGGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTAC
AGTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037905XLOC_037905Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060262-proteinTCONS_00060262-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060262-exon-scaffold_339-1575043694:117215..117314TCONS_00060262-exon-scaffold_339-1575043694:117215..117314Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1575043694:115684..115840TCONS_00060262-exon-scaffold_339-1575043694:115684..115840Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1575043694:115233..115296TCONS_00060262-exon-scaffold_339-1575043694:115233..115296Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1575043694:114353..114612TCONS_00060262-exon-scaffold_339-1575043694:114353..114612Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1575043694:113809..113965TCONS_00060262-exon-scaffold_339-1575043694:113809..113965Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1575043694:111208..112236TCONS_00060262-exon-scaffold_339-1575043694:111208..112236Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1510915933:117215..117314TCONS_00060262-exon-scaffold_339-1510915933:117215..117314Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1510915933:115684..115840TCONS_00060262-exon-scaffold_339-1510915933:115684..115840Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1510915933:115233..115296TCONS_00060262-exon-scaffold_339-1510915933:115233..115296Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1510915933:114353..114612TCONS_00060262-exon-scaffold_339-1510915933:114353..114612Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1510915933:113809..113965TCONS_00060262-exon-scaffold_339-1510915933:113809..113965Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1510915933:111208..112236TCONS_00060262-exon-scaffold_339-1510915933:111208..112236Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1491911889:117215..117314TCONS_00060262-exon-scaffold_339-1491911889:117215..117314Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1491911889:115684..115840TCONS_00060262-exon-scaffold_339-1491911889:115684..115840Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1491911889:115233..115296TCONS_00060262-exon-scaffold_339-1491911889:115233..115296Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1491911889:114353..114612TCONS_00060262-exon-scaffold_339-1491911889:114353..114612Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1491911889:113809..113965TCONS_00060262-exon-scaffold_339-1491911889:113809..113965Clytia hemisphaericaexon
TCONS_00060262-exon-scaffold_339-1491911889:111208..112236TCONS_00060262-exon-scaffold_339-1491911889:111208..112236Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_339supercontigscaffold_339:111208..117314 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.74832e-06	2.11353e-06	5.62572e-06	2.31286e-05	1.342e-06	1.16019e-06	0.000112765	3.95141e-05	0.0014376	9.02723e-05	7.52359e-05	4.03883e-05	5.70702e-06	6.70547e-07	2.08402e-06	2.664e-06	1.03833e-05	0.537754	4.19908e-05	2.44524	2.44166	1.8396	1.53453e-05	6.31139e-06	2.03342e-05	1.335e-05	2.86204e-06	7.01927e-06	3.9409e-07	1.81586e-06
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR028325VG_K_chnl
IPR013099K_chnl_dom
Vocabulary: Biological Process
TermDefinition
GO:0006813potassium ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005249voltage-gated potassium channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0008076voltage-gated potassium channel complex
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006813 potassium ion transport
cellular_component GO:0008076 voltage-gated potassium channel complex
molecular_function GO:0005249 voltage-gated potassium channel activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060262 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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