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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068249 ID=TCONS_00068249|Name=TCONS_00068249|organism=Clytia hemisphaerica|type=transcript|length=2117bp
AATAAATGAATGCTAAATAagcaggaaaaaaatttttgtatttttttcaa
aatagtctTATTTTCGTAAAACATTTTTCGTGTCATCCATATTCACTGAG
CACCAGTAAGAAGCAACACACTATGGACGCTAAACTATTGGAAAAGAAAT
TAAATCACTTAGCCAAGAAATTGGCTGCCATCCAAGCAGATGTAAAAGAG
AATAGAAAGAACATTCAAAAGTTGAACGAGACAAACCCAAAAGAATCAAA
AACTggtgaagaaaagaagaagtcTGGACCCAACAGCTCTGATAAACCAA
ACGAATCACCCAACAGCTCTGATAAACCAAACAAATCACACAACAGCTCT
GATAAACCAATCAAATTACACAACAGCTCTGATAAACCAAACGAATCACC
CAACAGCTCTGATAAACCAAACAAATCACACAACAGCTCTGATAAACCAA
TCAAATTACACAACAGCTCTGataaaccaatcaaatcacacaCTAACAAA
GctttcaccgataaaccgacCATCACCAAAGTTCTTCCTTTCAACGCTGA
CGAAGATGTCAAACCGCCTCCTCCCAAGCCGAAAGCCACTTTCAAGAAAC
TGGGCGCTAATGTGATCACTGATAACGCCAAAAAGAAGGATAATTCTGCT
CCAACTCCAAGAATCATACAAGTGGCTTCGAAAGATTCCGATTCTGATGA
TACATCACCAAGACGCCGATCACATTCGCATGTTCAAATCGAGAGAGATT
CACCAGACATCAATCAGAAGCTCTCCAAGATGACCGACGTTGTCGACAAA
GCAATGAAAGATTCAAATGAAGAAATGGAGGAAAAGATTGCGGAGGAGCG
TCAGAGTTATGCTGAAGGGCTCTCCATCCATGGGTTGAGTCGCATCGCTA
CCGGAGGGCCAGCCAGCCGCGTTCTCTGGATTATTCTGGTGGTTGGTTCT
CTCACCACAGCTATTTTAATCACCAAGGAACATTGGGATGCGTACTTAAG
CCACAACAGTGTGACCAACACGCGCATTGAAACAGCTCATGATATTCAAT
TCCCTTCCATCACAATTTGCAACTACGCTGGTATTAACGTGGAGAGGCGA
CACTTCAGTGGTAATCCACCTACCTATATTCGACCTCGCGTCGTTGAGGA
GAGCAGCATGCGGAATTGCGGGCACAACCTGACAAGTTGCAACTACCAGC
AAGCCGCTTTGTTGAAAGTTCAAAATTATTCTGCTGATTATGCACATTCA
GCTTTACAAAACGATCTGGTGAAATTTGATGACACAACAAATTGTTTCAC
AGTCGGTGGTTACTTGCAAGCGGCCCCTTCTGACATCTTTTCCGTCCAAC
TCGTTGCTAACCGAACTGGTGATCTTTGGAGTGAACTTTATATTAACCCC
ACTTCAGAGACCTTCCACGAAGCATCACCGACCATTTATTGGGCAAGTGA
GGGTTTTTACCACGTCAATGTCGTAAAGAAAATCATCACTCGTCTTGGTC
TTCCGTACACTGAATGCATCAAAGGCAGCGGTACTTACGCGCAAAACAAA
TTCACAGGAATCTACACTGTCACAAAATGTAAGAAAGGATGTTTCTGGGA
AGCTGTGTTCGAAAAATGTGGCGCCATTCCGCCAATGTATAAGAAACATA
TGCGAGAACCATATCGTTTTGACAACACATCTTTCATCAGTGATGCGGAT
GGGCAGGCTTGTTTAAGAGAGGTCGAAAACGATGACAGTGTCACAGAAAA
ATGTAATGGACAGTGCAAATTACAACCGTGTTACGAAGAAGACATTAAAA
TGTCGTTAGATTTTCATCGGTCACCAAATCCAAACTTTCTCGAATTTGCT
TTCACATTCAAATCGTTCCTCGTTGAAGTCGTCGAAGAAGCTCCAGCATA
CACATGGCAAGATTTGTTCGCCAATTTCGGTGGCTGTGTTGGCTTGATGA
CAGGAGCTTCCATTTTGTCTTTTGtggaacttttcattttcttgggATTA
ATTTTAATGGATAAATTTGACCTTTATTCAAAAGTATCGACCAAGGTTGT
GCCAACTTCAGATTGAACACTCCGGTTACTTATTAAAGACTTTGTCTTTG
TAAATATGGAATCCaag Run BLAST on NCBI transcript from alignment at scaffold_482:66476..68592+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068249 ID=TCONS_00068249|Name=TCONS_00068249|organism=Clytia hemisphaerica|type=transcript|length=2117bp|location=Sequence derived from alignment at scaffold_482:66476..68592+ (Clytia hemisphaerica)
AATAAATGAATGCTAAATAagcaggaaaaaaatttttgtatttttttcaa
aatagtctTATTTTCGTAAAACATTTTTCGTGTCATCCATATTCACTGAG
CACCAGTAAGAAGCAACACACTATGGACGCTAAACTATTGGAAAAGAAAT
TAAATCACTTAGCCAAGAAATTGGCTGCCATCCAAGCAGATGTAAAAGAG
AATAGAAAGAACATTCAAAAGTTGAACGAGACAAACCCAAAAGAATCAAA
AACTggtgaagaaaagaagaagtcTGGACCCAACAGCTCTGATAAACCAA
ACGAATCACCCAACAGCTCTGATAAACCAAACAAATCACACAACAGCTCT
GATAAACCAATCAAATTACACAACAGCTCTGATAAACCAAACGAATCACC
CAACAGCTCTGATAAACCAAACAAATCACACAACAGCTCTGATAAACCAA
TCAAATTACACAACAGCTCTGataaaccaatcaaatcacacaCTAACAAA
GctttcaccgataaaccgacCATCACCAAAGTTCTTCCTTTCAACGCTGA
CGAAGATGTCAAACCGCCTCCTCCCAAGCCGAAAGCCACTTTCAAGAAAC
TGGGCGCTAATGTGATCACTGATAACGCCAAAAAGAAGGATAATTCTGCT
CCAACTCCAAGAATCATACAAGTGGCTTCGAAAGATTCCGATTCTGATGA
TACATCACCAAGACGCCGATCACATTCGCATGTTCAAATCGAGAGAGATT
CACCAGACATCAATCAGAAGCTCTCCAAGATGACCGACGTTGTCGACAAA
GCAATGAAAGATTCAAATGAAGAAATGGAGGAAAAGATTGCGGAGGAGCG
TCAGAGTTATGCTGAAGGGCTCTCCATCCATGGGTTGAGTCGCATCGCTA
CCGGAGGGCCAGCCAGCCGCGTTCTCTGGATTATTCTGGTGGTTGGTTCT
CTCACCACAGCTATTTTAATCACCAAGGAACATTGGGATGCGTACTTAAG
CCACAACAGTGTGACCAACACGCGCATTGAAACAGCTCATGATATTCAAT
TCCCTTCCATCACAATTTGCAACTACGCTGGTATTAACGTGGAGAGGCGA
CACTTCAGTGGTAATCCACCTACCTATATTCGACCTCGCGTCGTTGAGGA
GAGCAGCATGCGGAATTGCGGGCACAACCTGACAAGTTGCAACTACCAGC
AAGCCGCTTTGTTGAAAGTTCAAAATTATTCTGCTGATTATGCACATTCA
GCTTTACAAAACGATCTGGTGAAATTTGATGACACAACAAATTGTTTCAC
AGTCGGTGGTTACTTGCAAGCGGCCCCTTCTGACATCTTTTCCGTCCAAC
TCGTTGCTAACCGAACTGGTGATCTTTGGAGTGAACTTTATATTAACCCC
ACTTCAGAGACCTTCCACGAAGCATCACCGACCATTTATTGGGCAAGTGA
GGGTTTTTACCACGTCAATGTCGTAAAGAAAATCATCACTCGTCTTGGTC
TTCCGTACACTGAATGCATCAAAGGCAGCGGTACTTACGCGCAAAACAAA
TTCACAGGAATCTACACTGTCACAAAATGTAAGAAAGGATGTTTCTGGGA
AGCTGTGTTCGAAAAATGTGGCGCCATTCCGCCAATGTATAAGAAACATA
TGCGAGAACCATATCGTTTTGACAACACATCTTTCATCAGTGATGCGGAT
GGGCAGGCTTGTTTAAGAGAGGTCGAAAACGATGACAGTGTCACAGAAAA
ATGTAATGGACAGTGCAAATTACAACCGTGTTACGAAGAAGACATTAAAA
TGTCGTTAGATTTTCATCGGTCACCAAATCCAAACTTTCTCGAATTTGCT
TTCACATTCAAATCGTTCCTCGTTGAAGTCGTCGAAGAAGCTCCAGCATA
CACATGGCAAGATTTGTTCGCCAATTTCGGTGGCTGTGTTGGCTTGATGA
CAGGAGCTTCCATTTTGTCTTTTGtggaacttttcattttcttgggATTA
ATTTTAATGGATAAATTTGACCTTTATTCAAAAGTATCGACCAAGGTTGT
GCCAACTTCAGATTGAACACTCCGGTTACTTATTAAAGACTTTGTCTTTG
TAAATATGGAATCCaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068249-exon-scaffold_482-1491911889:66476..68592 | TCONS_00068249-exon-scaffold_482-1491911889:66476..68592 | Clytia hemisphaerica | exon |
| TCONS_00068249-exon-scaffold_482-1510915933:66476..68592 | TCONS_00068249-exon-scaffold_482-1510915933:66476..68592 | Clytia hemisphaerica | exon |
| TCONS_00068249-exon-scaffold_482-1575043694:66476..68592 | TCONS_00068249-exon-scaffold_482-1575043694:66476..68592 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_482 | supercontig | scaffold_482:66476..68592 + |
Blast
The following BLAST results are available for this feature:
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