XLOC_042601 (gene) - C. hemisphaerica

Overview
NameXLOC_042601
Unique NameXLOC_042601
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_482:66476..72346+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042601 ID=XLOC_042601|Name=XLOC_042601|organism=Clytia hemisphaerica|type=gene|length=5871bp|location=Sequence derived from alignment at scaffold_482:66476..72346+ (Clytia hemisphaerica)
AATAAATGAATGCTAAATAagcaggaaaaaaatttttgtatttttttcaa aatagtctTATTTTCGTAAAACATTTTTCGTGTCATCCATATTCACTGAG CACCAGTAAGAAGCAACACACTATGGACGCTAAACTATTGGAAAAGAAAT TAAATCACTTAGCCAAGAAATTGGCTGCCATCCAAGCAGATGTAAAAGAG AATAGAAAGAACATTCAAAAGTTGAACGAGACAAACCCAAAAGAATCAAA AACTggtgaagaaaagaagaagtcTGGACCCAACAGCTCTGATAAACCAA ACGAATCACCCAACAGCTCTGATAAACCAAACAAATCACACAACAGCTCT GATAAACCAATCAAATTACACAACAGCTCTGATAAACCAAACGAATCACC CAACAGCTCTGATAAACCAAACAAATCACACAACAGCTCTGATAAACCAA TCAAATTACACAACAGCTCTGataaaccaatcaaatcacacaCTAACAAA GctttcaccgataaaccgacCATCACCAAAGTTCTTCCTTTCAACGCTGA CGAAGATGTCAAACCGCCTCCTCCCAAGCCGAAAGCCACTTTCAAGAAAC TGGGCGCTAATGTGATCACTGATAACGCCAAAAAGAAGGATAATTCTGCT CCAACTCCAAGAATCATACAAGTGGCTTCGAAAGATTCCGATTCTGATGA TACATCACCAAGACGCCGATCACATTCGCATGTTCAAATCGAGAGAGATT CACCAGACATCAATCAGAAGCTCTCCAAGATGACCGACGTTGTCGACAAA GCAATGAAAGATTCAAATGAAGAAATGGAGGAAAAGATTGCGGAGGAGCG TCAGAGTTATGCTGAAGGGCTCTCCATCCATGGGTTGAGTCGCATCGCTA CCGGAGGGCCAGCCAGCCGCGTTCTCTGGATTATTCTGGTGGTTGGTTCT CTCACCACAGCTATTTTAATCACCAAGGAACATTGGGATGCGTACTTAAG CCACAACAGTGTGACCAACACGCGCATTGAAACAGCTCATGATATTCAAT TCCCTTCCATCACAATTTGCAACTACGCTGGTATTAACGTGGAGAGGCGA CACTTCAGTGGTAATCCACCTACCTATATTCGACCTCGCGTCGTTGAGGA GAGCAGCATGCGGAATTGCGGGCACAACCTGACAAGTTGCAACTACCAGC AAGCCGCTTTGTTGAAAGTTCAAAATTATTCTGCTGATTATGCACATTCA GCTTTACAAAACGATCTGGTGAAATTTGATGACACAACAAATTGTTTCAC AGTCGGTGGTTACTTGCAAGCGGCCCCTTCTGACATCTTTTCCGTCCAAC TCGTTGCTAACCGAACTGGTGATCTTTGGAGTGAACTTTATATTAACCCC ACTTCAGAGACCTTCCACGAAGCATCACCGACCATTTATTGGGCAAGTGA GGGTTTTTACCACGTCAATGTCGTAAAGAAAATCATCACTCGTCTTGGTC TTCCGTACACTGAATGCATCAAAGGCAGCGGTACTTACGCGCAAAACAAA TTCACAGGAATCTACACTGTCACAAAATGTAAGAAAGGATGTTTCTGGGA AGCTGTGTTCGAAAAATGTGGCGCCATTCCGCCAATGTATAAGAAACATA TGCGAGAACCATATCGTTTTGACAACACATCTTTCATCAGTGATGCGGAT GGGCAGGCTTGTTTAAGAGAGGTCGAAAACGATGACAGTGTCACAGAAAA ATGTAATGGACAGTGCAAATTACAACCGTGTTACGAAGAAGACATTAAAA TGTCGTTAGATTTTCATCGGTCACCAAATCCAAACTTTCTCGAATTTGCT TTCACATTCAAATCGTTCCTCGTTGAAGTCGTCGAAGAAGCTCCAGCATA CACATGGCAAGATTTGTTCGCCAATTTCGGTGGCTGTGTTGGCTTGATGA CAGGAGCTTCCATTTTGTCTTTTGtggaacttttcattttcttgggATTA ATTTTAATGGATAAATTTGACCTTTATTCAAAAGTATCGACCAAGGTTGT GCCAACTTCAGATTGAACACTCCGGTTACTTATTAAAGACTTTGTCTTTG TAAATATGGAATCCaagcttattttttttaactttttcgtattgaaattt tgtaagatGTAAATAATGTAAATATTGTAAAATATATGAAGACGTTTTat aatgcaaaaaaaaagaagtttatttTCTCAGCGTTACCTCGATAAAAATA GTCGAGGTTCTTACTTTCGAGAGGTTTAGAATTCAGCTCTGGTCATTGTT TTGTTTAATATAAAGTATTTACCCCTTGATTCGGTGGGTAATGACGAGGT GCAATGCAAAAGGTTGATGTTCTTAACCATTTAAGCTGTCCGTCGCTTTT TTTAGGTTTGATTTATTTGCCGAGGTAAAAAAtaaaggttcgacctattt gccgaTGTCGGCAAACGCCAAGGACTATAATcttgagttgaacattgtag aatagttatttttcaacatagaaaagtttgtaactattcatttttttcat ttcaaaccaccTAATAcgaaaatcttgtaaaaaatgataaatttcggGCA AATAGGCCGAAATTTCGCATGTCAGCAAATCCCGACAATGgcaaggaaat caaaaatgctcatgtcggcatatgccgacacataccctgagtatcagaag TTAAGTTTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa tgaagagcaaatattaccttattaatgtctagcagactgtatcagtatgc agtttactatttacgaattccccagaaacctccaagtgtaatcgaagtga gtttctatcgaaagaaatcttttacatgatccccaaatgtataatagtaa ttactaaactataatttaatcgaaataatagacagactttatgttatgat tctctatcactgactctttttaaaaagcattgatgatattttttgttgtg ttttcaacgacgggaataaaaatatcaactttgaacttcatccaagatct tggatggtcgtcatggttacttttgtcttcgttgattgcgcgatggatag aatctcgattcgtcggcacagcgtcaatatatgattttgacctgtgcttt tcacggtagccgACACAGGCACAGAAAGggttaaaagtttttgattgaTC TTTCCAATGAGAAAGGGGATCCCCACCTGGTCTGTGATTTATCACTATCA GTAGGCATGATTCGGAAACAGGCCTTTTTTCACTTAAAGCGCCGACGGAT TGGTTTATCAAGATCTTAAGTGTGCGATAAGAATGAAATATTGTCTCGAG TAGAAAAAAACACATCAAAAACATACAAACAACTTACACGCGTTGTTTAT AAGAACCACTGAATAAATGTTGAGGACTTGAATGTTCTTTGAGTTGTTCT TatatatgcttatttttttctttcaaaaaatttttctattttcttagcTA CGTCTGAAATATGAGGCTGAGGTACTGCTTAATCTTTTCTCCAGTTTCGA GTTCtaatgaaatgaaaacatttgattttGGGGAAGAGTTTGATTTATTG ACTGCTAATTAGATCACGAAATTTTAGTCACCGTTGGCAAGTTTTCagga caaatattttttttcgtgaGAGCTAAATTTCAGAGCCGCTTTGCACCATT TTCGATTATGATAAACGTGATGCAACCTTTCGTTAGGGCTGTCAATCATA AAAAGTGAGCAAAGGGCCTGGGCTCGACTTTGTTAAAATTcgtgaaaaat ctcaaaagtttCTTTCTCCTTTAATTAATTTCAATAGAAAGTTCTGTTAC CAAGTTTTCAATACAAATGTGCTTCATGGGTAACAGGTGGTTTAGACCTC ATATCAAACCACCTCCGTTACCACATGTCAATTTCGTGTCCTTGTTTTGT TGATGTTTGTTTACACGAAGTCGTCATATTCAAAAAATTGTGGTCGGGTA TTATTGGAAGTGCAGTTTCGCTGAAAATTTGCTAATAATCGagaatgaaa tttattttgaatccTTAAATGAATTTAATGTTCAAGCGTTTTTCTTTAGG GCTTCAATAAATGTTTTTAAGATAAATTTGCGTAAATTCACTAAAAACTA AGGATTCCAGCCGAGTATAACCAAAAAAGATGGATTTGCCTGGATTCACT GGAAATGAGGAGAAAAGGCGAGAATCAACAAATAAAATAGCGTGAttctt tttaagaatattttaagcaagTTACTCAATACAAAGTAAATCAAGTTGAT AATTTATTCATTCGTTGACAAGTTCTTAAACAGGTGGATTGAATTGAAAT TTCGCATTCAATCAGAAAAACGCAGAATAAATACGATTCGATTTTTTGCC GCCATTTTCAAACATGAATCGATGTCAATATATCAATGTGGTAACTGTTT GCTACTTTTTGAATCATGAATATGAATTTATTTATAGTTGAATATTTTGC TGCATAATTGAGAAGTGAGGATTGACCAAACATTCTTGAATTATTAATAG ATTAGTAAACTTTATATTATCAAGTATATCTATAACTTTAATTTATCATT GGATTTATTTTAAAGGAGTAAATTTATTCGTGAGATCCAATCCAGAAGAG TTTATGTTGAAAAGATCTGAGTGAAAATGTCGGATACGGTGCAgttattg aaaaagattgaacTTTTGACGAAACAGGTTGCCAACATCGATCATGAAGT CAAGAAAAGTAAAAGTGATATTCGGAAACTTTCCTCCGGAAAATCACACG AAGATTTAGAATCCCTGGACAAAACGGAAAGTTTGGAGAAGAAGACGCGA GATGTGGACTTGGAACAAAACAATGTACGCAAACCCAAAACATCCGCAGC TCTAAGCAATTTCGATGTGATGGAAGAGAAAATTGCCGACGAGCGTCAAA GCTATGCTGAAGGTCTCACTATTCATGGGTTAAGTCGCATCGCTACCGGT CGACCGTTCAGCAAAGTCATATGGACCTTACTAGTGATGGCCTCCTTACT CACAGCTCTCCTCATTTCTAAAGAACATTTTGAAGCTTATTTAGGTGACC ACAGCGTCACACATACCGCCATAACTGCTGAAAATGAAATTGCAGTGCCC TCAATCACAATCTGCAATTACGATGGGATTAACAGAGAACGCCGACATTT TAGTGGAACTCCCCCTTTTTACACGAGACCTCAACTTGTGAGCGTCGACA TGCGTGAGTGTGGTAACAACTTGACAAAGTGTGGATACGATGGAAGAACT ATAGTCGAGGTTTTATTCTACTCCAGTGATTACGTCAAATCAAAGAAGTT GAACCATCTTGTGAAATTTGACGACACAACAAATTGTTTCACGGTCAGTG GTTTCACTCAGACTTTTCCCTCTGATATCTTTTCCGTCCAACTCGTTGCT AACCGAACAGGTGACCTTTGGAGCGAGCTCTACGTAAACCCTGACTATGA GACCTTCCACGAAGCCTCACCGACCATCTATTGGGCAAGTGAAGGATTTT ACCACGTCAATGTCGTGAAGAAAAAAGTTACAAGACTGGGGCTTCCTTAT ACTGAATGCATCAAAGGCAGCGGTACTTACACACAAAACAAATTCACCGG AGTCTACACAGTCACAAAATGTAAGAAAGGTTGCTTCTGGGAGGCTGTGT TTGAAAAATGTGGAGCTATTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068249TCONS_00068249Clytia hemisphaericatranscript
TCONS_00068250TCONS_00068250Clytia hemisphaericatranscript
TCONS_00068251TCONS_00068251Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_482supercontigscaffold_482:66476..72346 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.02 0 0.05 0.14 0.25 0.09 0.7 0.62 3.45 0.39 3.89 4.47 0.61 0.15 0.1 0.03 9.65 12.16 0.86 0.72 0.11 0.41 2.32 2.1 0.52 0.05 0.14 0.14