TCONS_00070690 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070690
Unique NameTCONS_00070690
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4206

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070690 ID=TCONS_00070690|Name=TCONS_00070690|organism=Clytia hemisphaerica|type=transcript|length=4206bp
TTGAGAAAATGGAAACATTTAAAATAAATCACTGATTTGGTTAATGAAAT
AACAAatcttaattattttttttgagacCGCGTTTACTTTTGATTTATCG
GAGATCAGAaatttggtaaattttattgaattcaCCTTGGACGTTTTGAT
TTTGCGGTTGTGTTTTTTGGACTGAATGAGCAGCATTACAAAATCTAGAT
GAATGTTTCCCAAAgtggaaaatgtttttcatcGTAAAACGAAGAATACT
CGACGAAAAAGAAGAATGGTTTATGCAATTGGTGTTATTTGGAGTTTGAT
TGGAATAACTAGTTTATTGTTGTTAGATCCATTCACATTCACTGCTGTAG
TTGCTGCATTTAGTGATGTCCACATATCAGCAGCTCAACCTATTCCATGT
AAAATCATTCGAAAACAATTTACTGAAGGCGTTATTCAGTTACCACAGTA
CCTTCAACAAATCAAAAGTTGCAAAGAAATACCTTCTTTGAAACGACAAA
TACCAAAACAGAAAGACACGACGACACGACAGCTACGACAACTCCCGACA
AACAACCGGCCTCTCTTACCATGGCAACAACTTTACAACGAATTATTACA
ACGGAAACGACAACAGACCGATCAACAGCGACAACGATCGTTGATTGAAC
AAGAAAATTTACAGAAACAATTTTTACAACATACCACACAACCTATGGTA
CAACAGAGTGGACTTTATAAACCACAACAACTGGATAAAACTGAACATAA
AAAGCAATCGTTAACAGAAAATTTCGTCTTTAAGCGTCAGAAACAGCAAC
AACAGCCACAACAAAGACGACTGAATAGACGACAGTTCACACAACCTATA
CAACCACCAACATTTACATTATTACCAACCCAGAAACAAAGACAGGACTT
ACAACAGAAAGAACTTATACGACGTACACAACAGCAATTTGCGTACATGA
AATGGTTTACAGCTTTAAAAGAACACCAACAACAGTTACTACATCAACAA
CAGCCTGCGATTAAGCGAAAACAAGACAAGATACAACCAACAACATCATA
CATTACACAGGCGTTGGGCTACAATCCAAAGTCGCCATTCACTAATTACC
CACTCTCACCAGGAAGAGGGAAAGTTACGAACCAGTTTGCTTTCAAAACT
CAGCAGCAAAAGGCAGCAAAGATTACGACAAAAGCTACAAAAATGCCACC
GAAAACtgactggaaaattttgaaaataccaAAAGGGCTTCTTcagttga
aaaacaaaaacaaacctatTAAAGCAAGAGAAAATAATAAAGCTCATGAG
AAACTTGTCTTTAAAATACAAAGCCATCCTTCTAAGACAAAATCTGTAGT
CCGACCACTAAAGAACgctgaaaaaatcttaaaagtcATGCACCAAAAAT
CACCTAATAAACAACACACTCCATATATTGCTGCAGTAAAAATCCGGCAA
AAACTACAGCCAAAACAAATAACAAACAGTAAAGTGACACTCGTTGAAAA
TAAGATATCACCAAAGATATCAccgaaaaaatccaataaaatgTTGAATG
ATGGTGAGAGATCACTAGGGAAAGGAATGGaggatgaaaaatcaaaaacc
caATTACAAGATTTactaaaaacaatcaaaataagcgattttcaaaaatt
acatgGGAAAACGcaccaaatcaaatcaaataaatcaaaGCCTTTAAATA
CACCTTTACTAACCAAGGACAGTCAATCACGAAAAGGTAAACCAGACGTC
GTAACTGTAGCTAAAACAAAGTCCCCAACAATTACTCAAATAgagacaac
aacaacaacaatgaCAACAGCAAACCAGGAACTACAAACGACACCTGCCA
ACAATCAGCCATCAAAGAATGACAACAAAATCCCTCCTCCagagatcaaa
acaaacactgAACTCGAGCAAGCGTTACAGAACTTACTATCAACCGACAC
ACAACAGAACATAAACAGTTATTACCCAAATTATGCTTCACCATACTACG
ACCAAAATGCAGTACAAACACAACCCAATTTCTACATTCCACCTTCCACC
TATCCATGGTGGCAACAACCTTATAGAGAATATGGTAGAAGTGTTATCCA
AGACTTACCAGGAGCTTTTAATCCACATATGACTTCTTTTCCATCTTTCA
GCCAGCATATAGATGATTCAAGGGTCCGGAAAACATTTGTTGATGAGGAA
GCTAAAATTGCGGAGAGTGAGGATGGTATACGTTCGTTTTTAAGTAAACA
CAAAAGTGATACCTCATTGTTCCAGAATGAAGTGGAGGCAAAGGACGATA
TTTTACCTTCTGAAGGAGGACCTGGTAGTCCTGAAAACGGACATTTATTA
ACTTTGAAAGACTATGAAGCATTTATTGCGCACCCTACGAATTCCTCTTT
AAAGTCTATCGAGAATTCGCCTGAAGTGGAGCTTCAGGAGCCTGGGGAGA
CTCGAACAATGGATAATATAGTCAACGGTGACGATGATGATGAGGTTATC
GCAGAGGCTAAATTAATCAAGGAACAGAGTCTAGCCAAAGCAGCCATTCA
ATCAGATAACGGGCGACGTAAGGATGTGTTAAGAGAACAAGAATCATTAC
GGAAACTTGAGCATGATAAATTGATTGAGAGATACGGTCATCCACCTGCC
AACCCCATGGAATATCTAGCACAAGTCTTTCAAGAGTTGGATGATGATAC
GAAAAACTTGGAAACAGCGAATGCAATAAAGAAAGAGGACATTCAAAATG
GCAGCAAAGCTGCCTCTGGTATTGATAATCGTAAAGTGGCTCAATCACCC
TCTGAGCCTATCTTAGGCGAAACAAAATCGACTTTAGAACTCAAATCAAG
TGATAATCAAACTTCTAAAACACTTAATATAAATTCAACAGATTCTGGCG
TAAATGATGCAAATCAGACTTTATCAAGAAACGGCGCTTCATTAAAAGGT
GTCGATCCTTTAACTGTCAAAAATGATGATTCATCTTTACTAGAttctgt
ttttgaaaaaatcaacgTTCAAAAAGATAATAGTACAACCAAGGTTAAGC
GATCCCCGATCATTGATGCTGACCTTGAACCGTGGACGAACAGACATAAA
TATAACCAACCTATAAATATACCAAACTCTGATAAAGCAAGTTTGACCAG
TACAAAGTTTCCATTAGGAGATATAGCTGATATAGCACAGCAGGTCAATA
AAAGAAGCGATATTCCCAAAGCTTGGACAGCAGATGATGGTGTTTCTATG
GGAGCAAACACAGACCATTCTAGACTAACATATTCGGAGGTTAAAAGACT
TTTTACAGATATTGAATCAAATAAGAAAGGATCTTTATGGAAGCTCTCTG
TCACTAAAAGATCAAATGGTTTGAAAGGAGAGACAAATGCGAAATTATTG
GTCAACGAAGGGAATGCTGATGGATTTTTAAGATAGTCGAAAATCTTGAT
AATAAAGTAAAGTCTCGAACcactataactcgaatgtctccttaactagA
ACACGTTCTTTTGTCCATTCAGTTAATAATATCTTAgaaaccttactcca
tatctcgaaatttccataactcgaacaaatttgtattccttgtgcgtgtt
cgagttatggagactcaactgtatcGTTATTGAACATGTTATGTGAACAT
CCTGTGACTTTAATTCTTTGGTTAAATGGTCAAGAAGGGTTTTTGCCAAG
TCTGTACCAAACCGATTTTCACATCAGCTCTAATGTTTTCCAAGTGAAca
actttttaacaattatttcataattttctaaAGATTTCGTTGGTCATTGA
CTTATCCACACCTAAATTgtacaaaaatgaatttttgcttcggaaTTTCa
ctattataaagtttttttccccttttttggaattcatacatgaaaaatca
aattagtcaaaaagaggaacaaaacctaaaaaatcggtatcggaatagTA
TTTCTTACGGAATCtcggaaattttagcaaaattattcggtatttcggaa
atcgcaaactcCATACGCCCCCTCCCCCTTCTAAGGTTGTCGTGGTGATC
ATTTCGCTTAATTTCAGGATTTTTATACCTTAAATACTGCAGATGGGGAA
AAGAGGGAACAAATTTGGCGATTCAACCAAATTagttgtcattaaaatac
agttgcctctctctaatttgatctttAAAGGATTACAACTTTGCTTCGAA
TTTTAG
Run BLAST on NCBI

protein sequence of TCONS_00070690-protein

>TCONS_00070690-protein ID=TCONS_00070690-protein|Name=TCONS_00070690-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1077bp
MFPKVENVFHRKTKNTRRKRRMVYAIGVIWSLIGITSLLLLDPFTFTAVV
AAFSDVHISAAQPIPCKIIRKQFTEGVIQLPQYLQQIKSCKEIPSLKRQI
PKQKDTTTRQLRQLPTNNRPLLPWQQLYNELLQRKRQQTDQQRQRSLIEQ
ENLQKQFLQHTTQPMVQQSGLYKPQQLDKTEHKKQSLTENFVFKRQKQQQ
QPQQRRLNRRQFTQPIQPPTFTLLPTQKQRQDLQQKELIRRTQQQFAYMK
WFTALKEHQQQLLHQQQPAIKRKQDKIQPTTSYITQALGYNPKSPFTNYP
LSPGRGKVTNQFAFKTQQQKAAKITTKATKMPPKTDWKILKIPKGLLQLK
NKNKPIKARENNKAHEKLVFKIQSHPSKTKSVVRPLKNAEKILKVMHQKS
PNKQHTPYIAAVKIRQKLQPKQITNSKVTLVENKISPKISPKKSNKMLND
GERSLGKGMEDEKSKTQLQDLLKTIKISDFQKLHGKTHQIKSNKSKPLNT
PLLTKDSQSRKGKPDVVTVAKTKSPTITQIETTTTTMTTANQELQTTPAN
NQPSKNDNKIPPPEIKTNTELEQALQNLLSTDTQQNINSYYPNYASPYYD
QNAVQTQPNFYIPPSTYPWWQQPYREYGRSVIQDLPGAFNPHMTSFPSFS
QHIDDSRVRKTFVDEEAKIAESEDGIRSFLSKHKSDTSLFQNEVEAKDDI
LPSEGGPGSPENGHLLTLKDYEAFIAHPTNSSLKSIENSPEVELQEPGET
RTMDNIVNGDDDDEVIAEAKLIKEQSLAKAAIQSDNGRRKDVLREQESLR
KLEHDKLIERYGHPPANPMEYLAQVFQELDDDTKNLETANAIKKEDIQNG
SKAASGIDNRKVAQSPSEPILGETKSTLELKSSDNQTSKTLNINSTDSGV
NDANQTLSRNGASLKGVDPLTVKNDDSSLLDSVFEKINVQKDNSTTKVKR
SPIIDADLEPWTNRHKYNQPINIPNSDKASLTSTKFPLGDIADIAQQVNK
RSDIPKAWTADDGVSMGANTDHSRLTYSEVKRLFTDIESNKKGSLWKLSV
TKRSNGLKGETNAKLLVNEGNADGFLR
Run BLAST on NCBI

transcript from alignment at scaffold_57:510146..519271-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070690 ID=TCONS_00070690|Name=TCONS_00070690|organism=Clytia hemisphaerica|type=transcript|length=9126bp|location=Sequence derived from alignment at scaffold_57:510146..519271- (Clytia hemisphaerica)
TTGAGAAAATGGAAACATTTAAAATAAATCACTGATTTGGTTAATGAAAT AACAAATCTTAATTATTTTTTTTGAGACCGCGTTTACTTTTGATTTATCG GAGATCAGAAATTTGGTAAATTTTATTGAATTCACCTTGGACGTTTTGAT TTTGCGGTAAGTTATTTATTGATCTTTTTAGTTGACACTCTATGGTTCGA AATTCGTGGGGAAGTGAATTTTGATTAGATACGGAAACGTATTGAATATT AGAGCGTCGTTTATGAATGTTTCTTGTTGACGTTGACTTTTAATATTATT GAACAATACACCCCTGTTTCACAGCCTCGGTGGAACTTCTTATCACAGTG GCGATGAACATTATCATCGAAATTCCTAATGGGGATATAAATTCTTTTGT TCTCGTGTCAAAAGAAGCAGTGGAGATGGTTTTGGTTAAGAACATTTAAA GGCTTCTTAAGAAAATGGGCAAAAATACTCATAAAATGGGGGAAAATAAG AACATGTTAAGAACATTTTTAGGCTTGAAACTCGAAAAATTAAGAACATC CAAAGGCTTCAAAAACTTTTGATGTTCTTATAAAAAAGCGTGTAGACCAA GATCAATTTAATTCTAGTAAACCCTCAAGATTTATAGCATCTTTTGCGAA ACACAATCGCATGTGACTGGTTCGAAAGTAGATAGGATTTATTTGAGACC GAGAATAAGGACTGGCAAAAGTTTTTATGGCCAAAGAACTGACCTTGGTA GGCAAAAACCTTAATTCCAAAAATGAGTAAAAAATTTACGATTTTTCAAA GTCAAATTAAACGAAAATGAATCATAACATCGGATAGAGCATGAAAAGGT ATACTACGACAAGTCTTATACTTAAAATTCATACAGGGTGTCCCTAATTA AAGTATCGAGTTTGAACATACGATTGAGTAGAAAAGTTTGTGTGTGTTAT CGCTAAAATATAAGAACGTTCTCCATCACACAGGNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNAAGAGGGAGAGCTTAAAATACAATTTTGTGAACACGCA CATAAAACTTTCTACTCAATCGCATGTTCAAACTCGATACTTTAATTAGG GACACCCTGTATCAAGATCATCAAGAAAAAAACAACTACTGCGTTTTCTC ATAGAGGTATAAAGAAAGATATACCTCCATGGTTTTCTTCAGTACTCTGT GTTTCATGTTTTTACACGACAATCATCAGCTGCTAAATTGAAAAAGAATT TATTAAAGTCTATTCACGATAAGTGTGCACTCTTTTTTCATTTACCTATA ACTTTTGAAGGAATTCTTCAATTTTTATANNGAAATTAAAAAATCTTTAA AAAAATTATAAAAATGAAGATGAAAATAAAGAAGAAAAAAATGAAGATCT TGTAGAAAGGTGATATGACTTTCATTTTCACAAGTTGTCAGTTGCATTGA GAAAAATAATTATTCAAAACAATAACTAATCTTTTGATTTGTAATTAGCT AAAAAAAATTTATTCCCACTTGCTCAAAATGTCAGAACGTTTGTGTAGAA GTTCCGTTTTGACGGAATAAAGCTCTGATTAGCTGAAAACTACACACATA AACAATTTTTTTTCTCAAAAAAAAACCTTGAAAATTTTGTAAATCTTGCG TGTCTCAGCCAATCAGATTTTTACTCGACGCTTTTTCGTGACTTTTTTTA CAAGAATCTGCTAATAGGAAATTCGTGTTATCAATTCTAATAAATTCAAA AATTACTTTATTTACTACCAGGTTGTGTTTTTTGGACTGAATGAGCAGCA TTACAAAATCTAGATGAATGTTTCCCAAAGTGGAAAATGTTTTTCATCGT AAAACGAAGAATACTCGACGAAAAAGAAGAATGGTTTATGCAATTGGTGT TATTTGGAGTTTGATTGGAATAACTAGTTTATTGTTGTTAGATCCATTCA CATTCACTGCTGTAGTTGCTGCATTTAGTGGTAAGGGTTGGTATTCACTT TAACAATTTATTTTCATAATGATTTAGCCTGGGAATCCAAGCTCATACAA TTTTAGAAAAAACAAAAAATACCTCACCTCACAATGTTCTAAAATTATAG AGCTTGGTGCAGGTAGATAGTCTGACTGAGAATGTTATAAACAGTCTGTG TATGAACCCTTGTTGACAGACTTTCTGAACTTTGGAAACCCAGGCAAACA CACTTAATCAACTTACCATAAAAACTCTTTCAAAAGCTCTAAAGACTTTC AAAACTATTAAAAACCACATCAAAACATCAGCCACATGTATTTAGACACC AGCCAACAGCCATTTTGTTTTGAAATCCCGGGGGGGCACTCAAGGTAAAT GACCTAACANTCCCTGCAGGCGAGTTACCTGCACCAAGCGTTAAACCAGC AGCAAAAATATCATAAACTAGACTGTGAAAAAAGTTTAACGCTTGGATTC CCAGGCTAATAATGATTCTACTGTATGACGACAGTTCTAATCAGGAATCC TTTGTAAAAAACCGCATGTCATTATCATTGCACTATACTTTAATGATTTG CTTTTATAATCNAAGGGTAGGAAATTACAAGACTGCACTGAACTGCACTG TAAGGGTAGGAAATTGTGATAAAAGGCCAATTTTTTGGTAAAATTGGCAC AAAATGGGTNGTAAAAAACCGCATGTCATTATCATTGCACTATACTTTAA TGATTTGCTTTTATAATTATTTTACAAACTTCAACTTTGATCATTTGTTT GCTTACTGTTTCTACCGATGTTCGATTGTAAGGTCTGGTATACATATTCA TGATATTTGTAGCGAAAGTGGATTTTCAATGAGTAAAATTTTAAAGTAAA TGTCAGCCTACTCTAGCTAAGGTTAAGGCTAAGGTCCTAGAGACCTTTTT TCTCAGATATAAAGGAGTTTCAAATTATTCCTTCGAACGAACTTCAGCTT TAAAAAATTATCTACTTTTTTTCGTTTTTTGCAGATGTCCACATATCAGC AGCTCAACCTATTCCATGTAAAATCATTCGAAAACAATTTACTGAAGGCG TTATTCAGTTACCACAGTACCTTCAACAAATCAAAAGTTGCAAAGAAAGT AAGTTTTATGCATTGTGAATTACATCCTCCTTTCACAGACTAGCTAAAAC CTGTGCCCCATTTGAAAATTTGAACAAATCTCATACCCGGTGGAAAGAAT ACCCTACAATTTCACCCACTTGGAAATTGACTTTGATTTCATCCCCATTT GAAATTCGATGACAAAAATTGTAATCCAAAACCATCCTCACTGGATTTTC TGAGCTGGAAACAATATAATTTCTATCCCCAATTTGGATTTTGATAGACT TTTTCATCCCCGCTGTAGGAAAAAGTTCCACTTGGGCTGTGAGACAGGAG TGTTGACCTGTGTACCCCCTTTTATACGAGCTCAACCTTCACTTGTAAAT TTTTTGAGAATCCCTCAAAATGGAGCTCAGTCCCTTAGTTCACTTTTTTA TGATAATATCCGTTAGATTAACGGTGAAGGAAAGCTTTTATTACATCCCC TTCTTACAGACCCAATGAGACCCCTTCCCACTAGAAATATTGACCAAAAT ATCATCCCAAATAGAAAATAAGACTCAAATTGTCTCTGCTGAATATAATG TAATAAACAAATCCTAATTGCAAAATATTGTGCTATTTTTCTATTTCCAT TGAATTTTCCGGCTTAAAAACAATGAAATTGGAAACCCCAGCCATAATAA CTGCACCAAATTCCATTCTGTTTTTACTACCCCAACAGGAAAATTCTACC AGGTCTGTAAAAGGGCTGTACTTTTTTGGATAGGGTTCTCAGCGAATCAT ATTTTCATTTTTGTTTTGCTTCTTATGTAGTACCTTCTTTGAAACGACAA ATACCAAAACAGAAAGACACGACGACACGACAGCTACGACAACTCCCGAC AAACAACCGGCCTCTCTTACCATGGCAACAACTNATAATGATTCTACTGT ATGACGACAGTTCTAATCAGGAATCCTTTGTAAAAAACCGCATGTCATTA TCATTGCACTATACTTTAATGATTTGCTTTTATAATTATTTTACAAACTT CAACTTTGATCATTTGTTTGCTTACTGTTTCTACCGATGTTCGATTGTAA GGTCTGGTATACATATTCATGATATTTGTAGCGAAAGTGGATTTTCAATG AGTAAAATTTTAAAGTAAATGTCAGCCTACTCTAGCTAAGGTTAAGGCTA AGGTCCTAGAGACCTTTTTTCTCAGATATAAAGGAGTTTCAAATTATTCC TTCGAACGAACTTCAGCTTTTAAAAATTATCTACTTTTTTTCGTTTTTTG CAGATGTCCACATATCAGCAGCTCAACCTATTCCATGTAAAATCATTCGA AAACAATTTACTGAAGGCGTTATTCAGTTACCACAGTACCTTCAACAAAT CAAAAGTTGCAAAGAAAGTAAGTTTTATGCATTGTGAATTACATCCTCCT TTCACAGACTAGCTAAAACCTGTGCCCCATTTGAAAATTTGAACAAATCT CATACCCGGTGGAAAGAATACCCTACAATTTCACCCACTTGGAAATTGAC TTTGATTTCATCCCCATTTGAAATTCGATGACAAAAATTGTAATCCAAAA CCATCCTCACTGGATTTTCTGAGCTGGAAACAATATAATTTCTATCCCCA ATTTGGATTTTGATAGACATTATCATCCCCGCTGTAGGAAAAAGTTCCAC TTGGGCTGTGAGACAGGAGTGTTGACCTGTGTACCCCCTTTTATACGAGC TCAACCTTCACTTGTAAATTTTTTGAGAATCCCTCAAAATGGAGCTCAGT CCCTTAGTTCACTTTTTTATGATAATATCCGTTAGATTAACGGTGAAGGA AAGCTTTTATTACATCCCCTTCTTACAGACCCAATGAGACCCCTTCCCAC TAGAAATATTGACCAAAATATCATCCCAAATAGAAAATAAGACTCAAATT GTCTCTGCTGAATATAATGTAATAAACAAATCCTAATTGCAAAATATTGT GCTATTTTTCTATTTCCATTGAATTTTCCGGCTTAAAAACAATGAAATTG GAAACCCCAGCCATAATAACTGCACCAAATTCCATTCTGTTTTTACTACC CCAACAGGAAAATTCTACCAGGTCTGTAAAAGGGCTGTGCTTTTTTGGAT AGGGTTCTCAGCGAATTATATTTTCATTTTTGTTTTGCTTCTTATGTAGT ACCTTCTTTGAAACGACAAATACCAAAACAGAAAGACACGACGACACGAC AGCTACGACAACTCCCGACAAACAACCGGCCTCTCTTACCATGGCAACAA CTTTACAACGAATTATTACAACGGAAACGACAACAGACCGATCAACAGCG ACAACGATCGTTGATTGAACAAGAAAATTTACAGAAACAATTTTTACAAC ATACCACACAACCTATGGTACAACAGAGTGGACTTTATAAACCACAACAA CTGGATAAAACTGAACATAAAAAGCAATCGTTAACAGAAAATTTCGTCTT TAAGCGTCAGAAACAGCAACAACAGCCACAACAAAGACGACTGAATAGAC GACAGTTCACACAACCTATACAACCACCAACATTTACATTATTACCAACC CAGAAACAAAGACAGGACTTACAACAGAAAGAACTTATACGACGTACACA ACAGCAATTTGCGTACATGAAATGGTTTACAGCTTTAAAAGAACACCAAC AACAGTTACTACATCAACAACAGCCTGCGATTAAGCGAAAACAAGACAAG ATACAACCAACAACATCATACATTACACAGGCGTTGGGCTACAATCCAAA GTCGCCATTCACTAATTACCCACTCTCACCAGGAAGAGGGAAAGTTACGA ACCAGTTTGCTTTCAAAACTCAGCAGCAAAAGGCAGCAAAGATTACGACA AAAGCTACAAAAATGCCACCGAAAACTGACTGGAAAATTTTGAAAATACC AAAAGGGCTTCTTCAGTTGAAAAACAAAAACAAACCTATTAAAGCAAGAG AAAATAATAAAGCTCATGAGAAACTTGTCTTTAAAATACAAAGCCATCCT TCTAAGACAAAATCTGTAGTCCGACCACTAAAGAACGCTGAAAAAATCTT AAAAGTCATGCACCAAAAATCACCTAATAAACAACACACTCCATATATTG CTGCAGTAAAAATCCGGCAAAAACTACAGCCAAAACAAATAACAAACAGT AAAGTGACACTCGTTGAAAATAAGATATCACCAAAGATATCACCGAAAAA ATCCAATAAAATGTTGAATGATGGTGAGAGATCACTAGGGAAAGGAATGG AGGATGAAAAATCAAAAACCCAATTACAAGATTTACTAAAAACAATCAAA ATAAGCGATTTTCAAAAATTACATGGGAAAACGCACCAAATCAAATCAAA TAAATCAAAGCCTTTAAATACACCTTTACTAACCAAGGACAGTCAATCAC GAAAAGGTAAACCAGACGTCGTAACTGTAGCTAAAACAAAGTCCCCAACA ATTACTCAAATAGAGACAACAACAACAACAATGACAACAGCAAACCAGGA ACTACAAACGACACCTGCCAACAATCAGCCATCAAAGAATGACAACAAAA TCCCTCCTCCAGAGATCAAAACAAACACTGAACTCGAGCAAGCGTTACAG AACTTACTATCAACCGACACACAACAGAACATAAACAGTTATTACCCAAA TTATGCTTCACCATACTACGACCAAAATGCAGTACAAACACAACCCAATT TCTACATTCCACCTTCCACCTATCCATGGTGGCAACAACCTTATAGAGAA TATGGTAGAAGTGTTATCCAAGACTTACCAGGAGCTTTTAATCCACATAT GACTTCTTTTCCATCTTTCAGCCAGCATATAGATGATTCAAGGGTCCGGA AAACATTTGTTGATGAGGAAGCTAAAATTGCGGAGAGTGAGGATGGTATA CGTTCGTTTTTAAGTAAACACAAAAGTGATACCTCATTGTTCCAGAATGA AGTGGAGGCAAAGGACGATATTTTACCTTCTGAAGGAGGACCTGGTAGTC CTGAAAACGGACATTTATTAACTTTGAAAGACTATGAAGCATTTATTGCG CACCCTACGAATTCCTCTTTAAAGTCTATCGAGAATTCGCCTGAAGTGGA GCTTCAGGAGCCTGGGGAGACTCGAACAATGGATAATATAGTCAACGGTG ACGATGATGATGAGGTTATCGCAGAGGCTAAATTAATCAAGGAACAGAGT CTAGCCAAAGCAGCCATTCAATCAGATAACGGGCGACGTAAGGATGTGTT AAGAGAACAAGAATCATTACGGAAACTTGAGCATGATAAATTGATTGAGA GATACGGTCATCCACCTGCCAACCCCATGGAATATCTAGCACAAGTCTTT CAAGAGTTGGATGATGATACGAAAAACTTGGAAACAGCGAATGCAATAAA GAAAGAGGACATTCAAAATGGCAGCAAAGCTGCCTCTGGTATTGATAATC GTAAAGTGGCTCAATCACCCTCTGAGCCTATCTTAGGCGAAACAAAATCG ACTTTAGAACTCAAATCAAGTGATAATCAAACTTCTAAAACACTTAATAT AAATTCAACAGATTCTGGCGTAAATGATGCAAATCAGACTTTATCAAGAA ACGGCGCTTCATTAAAAGGTGTCGATCCTTTAACTGTCAAAAATGATGAT TCATCTTTACTAGATTCTGTTTTTGAAAAAATCAACGTTCAAAAAGATAA TAGTACAACCAAGGTTAAGCGATCCCCGATCATTGATGCTGACCTTGAAC CGTGGACGAACAGACATAAATATAACCAACCTATAAATATACCAAACTCT GATAAAGCAAGTTTGACCAGTACAAAGTTTCCATTAGGAGATATAGCTGA TATAGCACAGCAGGTCAATAAAAGAAGCGATATTCCCAAAGCTTGGACAG CAGATGATGGTGTTTCTATGGGAGCAAACACAGACCATTCTAGACTAACA TATTCGGAGGTTAAAAGACTTTTTACAGATATTGAATCAAATAAGAAAGG ATCTTTATGGAAGCTCTCTGTCACTAAAAGATCAAATGGTTTGAAAGGAG AGACAAATGCGAAATTATTGGTCAACGAAGGGAATGCTGATGGATTTTTA AGATAGTCGAAAATCTTGATAATAAAGTAAAGTCTCGAACCACTATAACT CGAATGTCTCCTTAACTAGAACACGTTCTTTTGTCCATTCAGTTAATAAT ATCTTAGAAACCTTACTCCATATCTCGAAATTTCCATAACTCGAACAAAT TTGTATTCCTTGTGCGTGTTCGAGTTATGGAGACTCAACTGTATCGTTAT TGAACATGTTATGTGAACATCCTGTGACTTTAATTCTTTGGTTAAATGGT CAAGAAGGGTTTTTGCCAAGTCTGTACCAAACCGATTTTCACATCAGCTC TAATGTTTTCCAAGTGAACAACTTTTTAACAATTATTTCATAATTTTCTA AAGATTTCGTTGGTCATTGACTTATCCACACCTAAATTGTACAAAAATGA ATTTTTGCTTCGGAATTTCACTATTATAAAGTTTTTTTCCCCTTTTTTGG AATTCATACATGAAAAATCAAATTAGTCAAAAAGAGGAACAAAACCTAAA AAATCGGTATCGGAATAGTATTTCTTACGGAATCTCGGAAATTTTAGCAA AATTATTCGGTATTTCGGAAATCGCAAACTCCATACGCCCCCTCCCCCTT CTAAGGTTGTCGTGGTGATCATTTCGCTTAATTTCAGGATTTTTATACCT TAAATACTGCAGATGGGGAAAAGAGGGAACAAATTTGGCGATTCAACCAA ATTAGTTGTCATTAAAATACAGTTGCCTCTCTCTAATTTGATCTTTAAAG GATTACAACTTTGCTTCGAATTTTAG

Coding sequence (CDS) from alignment at scaffold_57:510146..519271-

>TCONS_00070690 ID=TCONS_00070690|Name=TCONS_00070690|organism=Clytia hemisphaerica|type=CDS|length=3234bp|location=Sequence derived from alignment at scaffold_57:510146..519271- (Clytia hemisphaerica)
ATGTTTCCCAAAGTGGAAAATGTTTTTCATCGTAAAACGAAGAATACTCG
ACGAAAAAGAAGAATGGTTTATGCAATTGGTGTTATTTGGAGTTTGATTG
GAATAACTAGTTTATTGTTGTTAGATCCATTCACATTCACTGCTGTAGTT
GCTGCATTTAGTGATGTCCACATATCAGCAGCTCAACCTATTCCATGTAA
AATCATTCGAAAACAATTTACTGAAGGCGTTATTCAGTTACCACAGTACC
TTCAACAAATCAAAAGTTGCAAAGAAATACCTTCTTTGAAACGACAAATA
CCAAAACAGAAAGACACGACGACACGACAGCTACGACAACTCCCGACAAA
CAACCGGCCTCTCTTACCATGGCAACAACTTTACAACGAATTATTACAAC
GGAAACGACAACAGACCGATCAACAGCGACAACGATCGTTGATTGAACAA
GAAAATTTACAGAAACAATTTTTACAACATACCACACAACCTATGGTACA
ACAGAGTGGACTTTATAAACCACAACAACTGGATAAAACTGAACATAAAA
AGCAATCGTTAACAGAAAATTTCGTCTTTAAGCGTCAGAAACAGCAACAA
CAGCCACAACAAAGACGACTGAATAGACGACAGTTCACACAACCTATACA
ACCACCAACATTTACATTATTACCAACCCAGAAACAAAGACAGGACTTAC
AACAGAAAGAACTTATACGACGTACACAACAGCAATTTGCGTACATGAAA
TGGTTTACAGCTTTAAAAGAACACCAACAACAGTTACTACATCAACAACA
GCCTGCGATTAAGCGAAAACAAGACAAGATACAACCAACAACATCATACA
TTACACAGGCGTTGGGCTACAATCCAAAGTCGCCATTCACTAATTACCCA
CTCTCACCAGGAAGAGGGAAAGTTACGAACCAGTTTGCTTTCAAAACTCA
GCAGCAAAAGGCAGCAAAGATTACGACAAAAGCTACAAAAATGCCACCGA
AAACTGACTGGAAAATTTTGAAAATACCAAAAGGGCTTCTTCAGTTGAAA
AACAAAAACAAACCTATTAAAGCAAGAGAAAATAATAAAGCTCATGAGAA
ACTTGTCTTTAAAATACAAAGCCATCCTTCTAAGACAAAATCTGTAGTCC
GACCACTAAAGAACGCTGAAAAAATCTTAAAAGTCATGCACCAAAAATCA
CCTAATAAACAACACACTCCATATATTGCTGCAGTAAAAATCCGGCAAAA
ACTACAGCCAAAACAAATAACAAACAGTAAAGTGACACTCGTTGAAAATA
AGATATCACCAAAGATATCACCGAAAAAATCCAATAAAATGTTGAATGAT
GGTGAGAGATCACTAGGGAAAGGAATGGAGGATGAAAAATCAAAAACCCA
ATTACAAGATTTACTAAAAACAATCAAAATAAGCGATTTTCAAAAATTAC
ATGGGAAAACGCACCAAATCAAATCAAATAAATCAAAGCCTTTAAATACA
CCTTTACTAACCAAGGACAGTCAATCACGAAAAGGTAAACCAGACGTCGT
AACTGTAGCTAAAACAAAGTCCCCAACAATTACTCAAATAGAGACAACAA
CAACAACAATGACAACAGCAAACCAGGAACTACAAACGACACCTGCCAAC
AATCAGCCATCAAAGAATGACAACAAAATCCCTCCTCCAGAGATCAAAAC
AAACACTGAACTCGAGCAAGCGTTACAGAACTTACTATCAACCGACACAC
AACAGAACATAAACAGTTATTACCCAAATTATGCTTCACCATACTACGAC
CAAAATGCAGTACAAACACAACCCAATTTCTACATTCCACCTTCCACCTA
TCCATGGTGGCAACAACCTTATAGAGAATATGGTAGAAGTGTTATCCAAG
ACTTACCAGGAGCTTTTAATCCACATATGACTTCTTTTCCATCTTTCAGC
CAGCATATAGATGATTCAAGGGTCCGGAAAACATTTGTTGATGAGGAAGC
TAAAATTGCGGAGAGTGAGGATGGTATACGTTCGTTTTTAAGTAAACACA
AAAGTGATACCTCATTGTTCCAGAATGAAGTGGAGGCAAAGGACGATATT
TTACCTTCTGAAGGAGGACCTGGTAGTCCTGAAAACGGACATTTATTAAC
TTTGAAAGACTATGAAGCATTTATTGCGCACCCTACGAATTCCTCTTTAA
AGTCTATCGAGAATTCGCCTGAAGTGGAGCTTCAGGAGCCTGGGGAGACT
CGAACAATGGATAATATAGTCAACGGTGACGATGATGATGAGGTTATCGC
AGAGGCTAAATTAATCAAGGAACAGAGTCTAGCCAAAGCAGCCATTCAAT
CAGATAACGGGCGACGTAAGGATGTGTTAAGAGAACAAGAATCATTACGG
AAACTTGAGCATGATAAATTGATTGAGAGATACGGTCATCCACCTGCCAA
CCCCATGGAATATCTAGCACAAGTCTTTCAAGAGTTGGATGATGATACGA
AAAACTTGGAAACAGCGAATGCAATAAAGAAAGAGGACATTCAAAATGGC
AGCAAAGCTGCCTCTGGTATTGATAATCGTAAAGTGGCTCAATCACCCTC
TGAGCCTATCTTAGGCGAAACAAAATCGACTTTAGAACTCAAATCAAGTG
ATAATCAAACTTCTAAAACACTTAATATAAATTCAACAGATTCTGGCGTA
AATGATGCAAATCAGACTTTATCAAGAAACGGCGCTTCATTAAAAGGTGT
CGATCCTTTAACTGTCAAAAATGATGATTCATCTTTACTAGATTCTGTTT
TTGAAAAAATCAACGTTCAAAAAGATAATAGTACAACCAAGGTTAAGCGA
TCCCCGATCATTGATGCTGACCTTGAACCGTGGACGAACAGACATAAATA
TAACCAACCTATAAATATACCAAACTCTGATAAAGCAAGTTTGACCAGTA
CAAAGTTTCCATTAGGAGATATAGCTGATATAGCACAGCAGGTCAATAAA
AGAAGCGATATTCCCAAAGCTTGGACAGCAGATGATGGTGTTTCTATGGG
AGCAAACACAGACCATTCTAGACTAACATATTCGGAGGTTAAAAGACTTT
TTACAGATATTGAATCAAATAAGAAAGGATCTTTATGGAAGCTCTCTGTC
ACTAAAAGATCAAATGGTTTGAAAGGAGAGACAAATGCGAAATTATTGGT
CAACGAAGGGAATGCTGATGGATTTTTAAGATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043976XLOC_043976Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070690-proteinTCONS_00070690-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070690-exon-scaffold_57-1575043694:519116..519271TCONS_00070690-exon-scaffold_57-1575043694:519116..519271Clytia hemisphaericaexon
TCONS_00070690-exon-scaffold_57-1575043694:517142..517350TCONS_00070690-exon-scaffold_57-1575043694:517142..517350Clytia hemisphaericaexon
TCONS_00070690-exon-scaffold_57-1575043694:516024..516137TCONS_00070690-exon-scaffold_57-1575043694:516024..516137Clytia hemisphaericaexon
TCONS_00070690-exon-scaffold_57-1575043694:510146..513872TCONS_00070690-exon-scaffold_57-1575043694:510146..513872Clytia hemisphaericaexon
TCONS_00070690-exon-scaffold_57-1510915933:519116..519271TCONS_00070690-exon-scaffold_57-1510915933:519116..519271Clytia hemisphaericaexon
TCONS_00070690-exon-scaffold_57-1510915933:517142..517350TCONS_00070690-exon-scaffold_57-1510915933:517142..517350Clytia hemisphaericaexon
TCONS_00070690-exon-scaffold_57-1510915933:516024..516137TCONS_00070690-exon-scaffold_57-1510915933:516024..516137Clytia hemisphaericaexon
TCONS_00070690-exon-scaffold_57-1510915933:510146..513872TCONS_00070690-exon-scaffold_57-1510915933:510146..513872Clytia hemisphaericaexon
TCONS_00070690-exon-scaffold_57-1491911889:519116..519271TCONS_00070690-exon-scaffold_57-1491911889:519116..519271Clytia hemisphaericaexon
TCONS_00070690-exon-scaffold_57-1491911889:517142..517350TCONS_00070690-exon-scaffold_57-1491911889:517142..517350Clytia hemisphaericaexon
TCONS_00070690-exon-scaffold_57-1491911889:516024..516137TCONS_00070690-exon-scaffold_57-1491911889:516024..516137Clytia hemisphaericaexon
TCONS_00070690-exon-scaffold_57-1491911889:510146..513872TCONS_00070690-exon-scaffold_57-1491911889:510146..513872Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:510146..519271 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.208016 0.21917 2.23096 1.99852 0.303297 0.152096 0.182249 0.317454 0.886972 0.568204 0.291963 1.64213 0.463183 0.474747 0 0 0.756952 0.705784 0.235815 0.482378 0.552042 0.739026 0.211509 0.150485 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070690 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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