TCONS_00071016 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071016
Unique NameTCONS_00071016
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3302

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071016 ID=TCONS_00071016|Name=TCONS_00071016|organism=Clytia hemisphaerica|type=transcript|length=3302bp
acagaaaaaaaaacaaaagataaataaataaacaaaaacacaTTGACGGC
CACCCTTAGGGGTGAAGAACCACAACTACTATGGATCCATTCAAAAAACT
TGCCCTTTTGAAGGCCAAAATGACCGGCATGAGTAGGGCCCAGATTGCGG
AAGCCATCCGAAACATGACCCTGGGAATAAACCCAACAGAACAAGAGCCA
GACCTTACTACACCACAAAATCAACCTTTGCAAGGACAGTCACAAAACGC
TGCAGGTGGTTTTTCCTACACTATAGATAATATAACCAGACTGAAAAGAT
ATCTGATCTTAGGTTCAGATAAAGCAAAATACAAGGGTGGCTCTCAAgca
gaaaatattcaaaatattccaGTTGTTGAAGAACTTTTAAAGGAGGGTAA
AGGAAAGGAGGTGATTGATTTGATCGTTCAGTTTGCTCGTGAAGCACGTA
TCTCAAAAGAGGAGAACATTTTGATGGTATTACGTGATTGTATGATGTAT
CAGGGAGATGCCATGTATGAAGATAGGACCATACAACGAGCTGCTTATGA
CAGTATCGTCAAAATCTGTAATATCCCAACCAAGCTTTTCCGATTGATGG
AGCTTTGTAAACCATGTTATCAAAATAATTGGAAGCCTTTAACCAAGCCA
GTCAGTAAGACGCAACTTCGGAAGAAAGCAAAACAAGAGGCAAAACAAGC
AGCTCAACAGCAGAATCAAAGGCCTTCCACCTCCACCGAAATCCCAGCTG
CTCAACCACCGTCAGCAAAAGTGCCAGTTGAAACAtgtgaaattgttgaa
gagggTGAACctccaaagaaaaagaaaaagaagatgaagaagaagaaaaa
accaaAGGAACCCAAACCTCAAACAacgcaaaaattcaaaaaatcttcaA
GTTGGGGACGTGCTAGACGGCGTGGTGTCGGCAATTTTTACACCGATTCA
AGTAAAGATGCCAATCGATTGTTATTGTTGATGACGAAGTACAAACAACG
TCATAATTGGAACCATGTTCAAACGTTGGGTTATTGTCATCCAAAAATGA
CGGGAGACGaggaacaagttaaaaacatcgtCCTCCAGTATTGCACACGT
GGCAAAGAAAAGTTGGACAAATATCTGGTCAAGAAAAAAATCGATGGGAA
TCAACCAATGGATCCAATCACATCTCAAATATTACAACACATAAAAGTTC
TTGAGGAAGTCAAGAACCTGAAACCGGATGTCCCGGCCGATGTGGAGAGA
TTGTTGCAATTGTTGCATCAATACGGTATTCGGGAGGTGCCACAAGAATT
TGAGGTGGACGCTGCAGGTCAGATGGTACAAGTGGAAAACACTCAAcgta
aaaaatgttcttttcaaCTGACCAGGGAGCATTTACCGAATGGCTTCCAA
AAATTGAAGGAGgtttggGTGGCTCTACTTCAAGACATGCCCATGACAGC
CTTGATCAGGAATCTCGGCAAAATGACCAGCCTTGGGCTCTTTGATGATC
CAGCAAACAGAGAAATCGTCAAGAAGGTTTTAGGAGATGGCTCTATTTTG
AACAAAGCAAGAATTCACCCAGTCAAGATTCTGTTAGCATCAAAGATGTA
TGAGCAAGGCCATGGTGATCAAGGCCAAAGCCATCAACCACAACAAGAAT
ATCCAACAATGAGTCTTTCTCAACAACTACgacaacaacgacaacgacaa
caacagccacaacaaccacaacaacgaGTACCAACCAAAGAACCACTTAC
TTGGATACCAAACGCTGAAATCTCCAAAGCTCTCAATGATGCTTTCTACT
TAAGTTTCAGGCAACCCGGCAAGAATTCTTCCTTCCGTACGGACAAAAAG
TTCATGTTAAATCTGGATGTTAGTGGCTCTATGGATTGGCGTAACTGTGT
AGGGTGTGATTTCCTGACGCCCGCTGCCGCCTCTTTCGCCCTGGCCATGA
TTACGATGAAAGTTGAGCCACATTGTAGCGTGTTCGCTTTCGGGCGCACG
CTTCAAAATATCGATCATTTATTGAAGAGGGATATGACCATCCGTGAAGC
CATTCAATTGGGACGCTCTATCAACTTTGGTGCAACAGACTGTGCTCTAC
CAATGGTGCATGCCACGCAGAACAGACTGGATGTGGACGTTTTCATTGTT
TACACTGACTCCGAAACTTGGGTTGGAAAAGTTCATCCTTCTGAAGCTTT
GAAGAATTATCGTCTAAAGATGAACAAACCGGATGCCAAACTCATTGTTA
TGGCAATGCAGGTGAATGATTTCACGATTGCCGATCCACTTGATCGCGGT
ATGTTTGACGTTTGCGGATTCGACTCTAACGTACCTGATATGATCTGCGA
GATCGCCAGAGGAAATATGTCTTAAAATCACCAAACAAAGAGAAACGAAA
TCTAAACCTTTCTGGTTAGCCTTTGTTTACATGGCTCTAGCTGCTGGTGA
TTTGGTGCTGGTGGTCTTAACATTCATATCGGGAAAAATGGAATTGATAC
ATTATCAACCAGCGCAGCAAAGAGAATGACCATCATTGACTTATTGCAGG
GTCCTTGGATTACTGGACAGGTGGGTCAAGCAGGTGATACGAGTTCTGTT
GTTCACTGACTGAGAAGATTCGCAGATTAGGACCCGTGTTTTTCAGTAAC
CTGTTTTGGCACTAAATGCAAAGGTAGAAACTTTTAAACACGTCCTATTC
TATAATTTTACATAAATAATAGTTTTGTTGAGCGACTGGAGTCACCTTTT
CGTGAATCTTTGGTTTGTCAGGGGGTTAAACCAACGTAGCCGAATGCCCT
TCTATCAGCGGTACAAACCGTAAACTGTATCAGCTGCTTGACCCACCCTA
TTGACACTATGCTATCCTTTGGTAAATCCAAAGGCAAAGGCATGAACGAA
TATGAACATTAATTGACATAAGATTCAAATGATGTATGGAAGCTAATACA
AATGTTATTCGTAGATATTATTTGGATCAAGGGATAATTTAATAATAACA
ATGCTTGTTTTTGTATCATGTATTCAGTGTTTTATGCTTTTAACCATCTT
TTTATACGGTCCATTTTAATTTGTATACATAACTTCAACTAGGGTATAAA
CCTCTCGGATGGCTTCCTGGCACAAAGTAAGTTTGTTTTTTGGTAAGTTC
AGGAAGTAgacaaagattttgtttgaaagaCTCAGTCCAGGGTTTGCTTG
TTAGTTTGTAGTTTTTCAATagattttattatattatttcaTTTACGCCT
TATATTTGATTACTGTATTGTCTAAACAATACTGCATGTTGCTATTCTGC
GG
Run BLAST on NCBI

protein sequence of TCONS_00071016-protein

>TCONS_00071016-protein ID=TCONS_00071016-protein|Name=TCONS_00071016-protein|organism=Clytia hemisphaerica|type=polypeptide|length=764bp
MDPFKKLALLKAKMTGMSRAQIAEAIRNMTLGINPTEQEPDLTTPQNQPL
QGQSQNAAGGFSYTIDNITRLKRYLILGSDKAKYKGGSQAENIQNIPVVE
ELLKEGKGKEVIDLIVQFAREARISKEENILMVLRDCMMYQGDAMYEDRT
IQRAAYDSIVKICNIPTKLFRLMELCKPCYQNNWKPLTKPVSKTQLRKKA
KQEAKQAAQQQNQRPSTSTEIPAAQPPSAKVPVETCEIVEEGEPPKKKKK
KMKKKKKPKEPKPQTTQKFKKSSSWGRARRRGVGNFYTDSSKDANRLLLL
MTKYKQRHNWNHVQTLGYCHPKMTGDEEQVKNIVLQYCTRGKEKLDKYLV
KKKIDGNQPMDPITSQILQHIKVLEEVKNLKPDVPADVERLLQLLHQYGI
REVPQEFEVDAAGQMVQVENTQRKKCSFQLTREHLPNGFQKLKEVWVALL
QDMPMTALIRNLGKMTSLGLFDDPANREIVKKVLGDGSILNKARIHPVKI
LLASKMYEQGHGDQGQSHQPQQEYPTMSLSQQLRQQRQRQQQPQQPQQRV
PTKEPLTWIPNAEISKALNDAFYLSFRQPGKNSSFRTDKKFMLNLDVSGS
MDWRNCVGCDFLTPAAASFALAMITMKVEPHCSVFAFGRTLQNIDHLLKR
DMTIREAIQLGRSINFGATDCALPMVHATQNRLDVDVFIVYTDSETWVGK
VHPSEALKNYRLKMNKPDAKLIVMAMQVNDFTIADPLDRGMFDVCGFDSN
VPDMICEIARGNMS
Run BLAST on NCBI

transcript from alignment at scaffold_58:1021292..1036772-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071016 ID=TCONS_00071016|Name=TCONS_00071016|organism=Clytia hemisphaerica|type=transcript|length=15481bp|location=Sequence derived from alignment at scaffold_58:1021292..1036772- (Clytia hemisphaerica)
ACAGAAAAAAAAACAAAAGATAAATAAATAAACAAAAACACATTGACGGC
CACCCTTAGGGGTGAAGAACCACAACTACTATGGATCCATTCAAAAAACT
TGCCCTTTTGAAGGCCAAAATGACCGGCATGAGTAGGGCCCAGATTGCGG
AAGCCATCCGAAACATGACCCTGGGAATAAACCCAACAGAACAAGAGCCA
GACCTTACTACACCACAAAATCAACCTTTGCAAGGACAGTCACAAAACGC
TGCAGGTGGTTTTTCCTACACTATAGATAATATAACCAGACTGAAAAGAT
ATCTGATCTTAGGTTCAGATAAAGCAAAATACAAGGGTGGCTCTCAAGCA
GAAAATATTCAAAATATTCCAGTTGTTGAAGAACTTTTAAAGGAGGGTAA
AGGAAAGGAGGTGATTGATTTGATCGTTCAGTTTGCTCGTGAAGCACGTA
TCTCAAAAGAGGAGAACATTTTGATGGTATTACGTGATTGTATGATGTAT
CAGGGAGATGCCATGTATGAAGATAGGACCATACAACGAGCTGCTTATGA
CAGTATCGTCAAAATCTGTAATATCCCAACCAAGCTTTTCCGATTGATGG
AGCTTTGTAAACCATGTTATCAAAATAATTGGAAGCCTTTAACCAAGCCA
GTCAGTAAGACGCAACTTCGGAAGAAAGCAAAACAAGAGGCAAAACAAGC
AGCTCAACAGCAGAATCAAAGGCCTTCCACCTCCACCGAAATCCCAGCTG
CTCAACCACCGTCAGCAAAAGTGCCAGTTGAAACATGTGAAATTGTTGAA
GAGGGTGAACCTCCAAAGAAAAAGAAAAAGAAGATGAAGAAGAAGAAAAA
ACCAAAGGAACCCAAACCTCAAACAACGCAAAAATTCAAAAAATCTTCAA
GTTGGGGACGTGCTAGACGGCGTGGTGTCGGCAATTTTTACACCGATTCA
AGTAAAGATGCCAATCGATTGTTATTGTTGATGACGAAGTACAAACAACG
TCATAATTGGAACCATGTTCAAACGTTGGGTTATTGTCATCCAAAAATGA
CGGGAGACGAGGAACAAGTTAAAAACATCGTCCTCCAGTATTGCACACGT
GGCAAAGAAAAGTTGGACAAATATCTGGTCAAGAAAAAAATCGATGGGGT
AACGATATTTCATTCTTTTCTATTTCATTTTTTAAAAATTTGTAAGAAGA
GATGTGATAATTTCATCACTGTCTGTGTAGTGTAGGGAAAAGTTTTCCCA
AATCTCCAATTCTTTACTTACACAACATTTAAACAAAAGAAAGAACAACC
CCATTTTCAGAGCTGCGCGAGCACAAATTTTGAGAAATTCTTTTGTTTGT
TATACTTTTTCCGCAAAGAGGCTTCTTATTAAAAAAGAAGATCCTTAATA
TTTCCACTACCGTCCCTGCGCACTTCCGGGAGGTAATCGAAAAAGGTTGA
ATCCAAATGCAGCACCATAAAAGCTTTTCGGTACCATACCGGATCCAAGT
TTAGTAAATATCATGAAATTTTTCACATTGATAACAAGGTTTTCTTAATT
TTTGGACTTTCTTTCAAGAATCAACCAATGGACCCAATCACATCTCAAAT
ATTACAACACATAAAAGTTCTTGAGGAAGTCAAGAACCTGAAACCGGATG
TCCCGGCCGATGTGGAGAGATTGCTGCAATTGTTGCACCAATACGGTATT
CGGGAGGTGCCACAAGAATTTGAGGTTGACGCTGCAGGTCAAATGGTACA
AGTGGAAAACACTCAACGTAAAAAATGTTCTTTTCAACTGACCAGGGAGC
ATTTACCAAATGGCTTCCAAAAATTGAAGGAGGTAATAGTTGATCATTTA
AACAAAACTTAAACCGCTAATATACGGTTTTTTTCTATCCCGATCAGCCC
AAATAGATTTTCTGTTGATCGAAAGGTGATCTTTGAAAGCTTGACTAAAA
GCTCTTTTAATCGTAATTATATACAATTTCACTCTACTCAACAATACCAA
TCTTTCTCCATTGAAATTTTTAGGTTTGGGTGGCTCTACTTCAAGACATG
CCCATGACAGCCATGATCAGGAATCTCGGCAAAATGACCAGCCTTGGGCT
CTTTGATGAATCAGCAAACAGAGAAATTGTCAAGAAGGTTTTAGGGGATG
GCTCTATTTTGAACAAAGCAAGAATTCACCCAGTCAAGGTTTGCTATTTA
TTTAGAGTGATGGCCAAGGCGCATAAACCAGGGGCTCCCTGCATCTGTCG
ATAGTTATTTTTCAAGCCCTTTTAGTTTTGGCGCACGTTTTCTACACGAC
AATAATAGCTGCGTGTAAATTTATGGAAACAAGGCATATCTTTTTGCTTA
TTGGTGATATTTAACGTTAAATTTCGACAGTTTTACACTGCACCTTACAT
GAATGATCAAATACACGTTTTTTTTTAAGAAACTAGTTCTACCAAGCAGC
CTCAATGTTTCTTAAGAAATTTGCCATTTGAGCTTTAAAAATGTTTCTTA
CATGTTTCAAAATTTTTTGACATAATCAGCTTCATGGAAGGCTGGATTGG
AAGGATTTAAAAAAAAATGAATTAAAAAATGTTATTTTCTCATTCTCAGC
CTCAGCATGTTTCTTAGTTTTTAGGCATTCTGAGCCTCATGTTTCTTAAA
AGTGTGTTTCTTAAAAAAAAACCGTGTACCAACTATATATCCATGCAGGG
AAAATTAGAAAAGCAATGCACCGTGATTGAACCTGTAAGTAATGCACCGT
GATTGAACCTTGTTACAGATTCTGTTAGCATCAAAGATGTATGAGCAAGG
CAATGGTGATCAAGGGCAAAGCCATCAACAACAACAAAAAAATCAAACAA
TGAGTCAATCAACCAAAGAACCACTTACTTGGAGACCAAACGCTGAAATC
TCCAAAGCTCTCAATGATGCTTTCTACTTAAGTTTCAGAGTAAGCTCTAT
TCTAGATATGCAGGCATGGTTAACATAGTCAAGCATTCTGCTATAACGAA
TTCCTATGGCTCGTGCGCTAGAGTTTCATTTATCATTTGAACTTTTATAT
ACTTGCTAAAATTGATTAGTTTTCTGGAGAATCTCTTTCATTATTTCCAT
AGCAACCCGGCAAGAATTCTTCATTCCGTACGGACAAAAAGTTCATGTTA
AATCTAGATGTTAGTGACTCTATGGATTGGGGTAACTGTGTAGGGTGTGA
TTTCCTGACGCCCGCTGCCGCCTCTTTCGCCCTGGCCATGATTACGATGA
ATGTTGAGCCACATTGTAGTGTGTTCGCTTTCGGGGGAACGCTTCAAAAT
ATCGATCATTTATTGAAGAAGGATATGACCATCCTTGAAGCCATTCAAGT
GGGACGCTCTGTAAGTCGACTTCACTATCAAGAAATCTTGTTTTAAATAT
TCTCATTTCTTTATTTCTTCGAACTTGGGCCTCACATAAAACAGAACATC
ATTCTTAGAACGTCAAAAATGTCTAATTCCGAATTCTATTTGAATCTTTC
TATAGTTCGAACTAATTCCCAGTCCCCATCAGCATCAATTTTCAATATTC
CCTTTCGACTTTGAATGAGCGAGACTAAAATATATACATTATCGGCCAAA
ACTTAGCCGGCCTCAATTATTAGTCGGCCCTAATTTTAGTCACATCATCA
AAATTTAGTCACTTAGGGTCGACTAAATTTTGGCCGATAAGGTATAAAAA
ATCGACTTCCATGTCAATAGCTTTATTCCGCAATTTTCTGTGCTTTCTCT
TTTTATCAGTTATGTCATCATGCCTCATTAAACTTAACTTAGGACATCCG
TATTATCTTTCAGCTCAATTTCGGTGCAACAGACTGTGCTCTACCAATGG
TGCACGCCACGCAGAACAGGCTGGATGTGGACGTTTTCATCGTTTACACT
GACTCCGAAACTTGGATTGGAAAAGTTCATCCTTCTGAAGCTTTAAAGAA
TTATCGGCAAAAGATGAACAAACCGGATGCCAAACTCATCGTCATGGCAA
TGAAGGTTTGTCTGTTCTCCACACGGCCCTGTAATGTAGTCTGTGCCTCT
AAAGAATCCTGCATTGTAACACACATGCTTAATTTGTCGNTTTCACGGCC
CTGTAATGTAGTCTGTGCCTCTAAAGAATCCTCCATTGTAACACGCATGC
TTAATTTGTCGTTCTTTAAACCATATATAGTTAATTCCCGTGATAAACAA
AGAGGAATGAATCTGTAGGGGTGGTACATGTCACTTTCGGTCGGGGCTGT
GGACGGCCAAATATGTCGATTTTTATGAAATTTGTCGTTTTTTTGTCTAT
TTTTAGTAATGCAGGATTCTTTAGATAAACCCCTCATGATATTATGATAT
CTCGTTATAAAAAGTGATGGCATCAATTCATTTCAGTCGGTTTCAATCCT
GTAAAACCTTAAAAACACACGGTGAATAGGTCATCAACTTCTAGTTATTA
GAATTCTGTAGATAAACCCTTTTCTTTTTCATTGTATTCGAACTTTTTGT
ATGACTTCCCAAGGGAATGTTGTGGTGCTTATAAAGACTTTTTTACAGGT
TTTGTAAGGGATTGTTGTGATGCATATAAAGACTTTTTTACAGGTTTTGT
ACGGGATTGTTGTGGTGAATATAAAGACTTTTTTACAGGTTTTGTACGGG
AATGATGTGATGCATATTAAAACTTTTTTACAGGTTTTGTACGGGATTGT
TTTGGTGAATATAAAGACTTTTTTACAGGTTTTGTACGGGATTGTTTTGG
TGAATATAAAGACTTTTTTACAGGTTTTGTACGGGAATGTTGTGGTGAAT
ATAAAGAGTTTTTTACAGGTTTTGTACGGGAATGTTGTGATGCATATAAA
GACTTTTTTACAGGTTTTGTACGGGATTGTTGATGGTGAATAAAAAGACT
TTTTTACAGGTTTTGTACGGGATTGTTGTGGTGAATATGAAGACTTTTTT
ACAGGTTTTGTACGGGATTGTTGTGGTGAATATAAAGAGTTTTTTACAGG
TTTTGTACGGGATTGTTGTGATGCATATAAAGACTTTTTTACAGGTTTTG
TACGGGATTGTTGTGGTGCATATAAAAACTTTTTACAGGTTTTGTACGGG
AATGATGTGATGCATATTAAAACTTTTTTACCTGTTTTTACAGGTTTTGT
ACGGGGTTGTTGTGGTGAATATAAAGACTTTTTTACAGGTTTTGTACGGG
ATTGTTGTGATGTATATAAAGAATATTTTACAGATTTTGTACGGGATTGT
TGTGCAGAATATAAAGACCTTTTTACAGGTTTAGTACGGTAATGTTGTAG
TGAATATAAAGACCTTTTTTACAGGTTTTATACGGGATTGTTGTGGTGCA
TATATATTTTATTTTATTGGACCTACCCCAGTGGAGGTCCTATAAATTAA
CCGTTGTATGTTCGTTCGTTCGTTACCAGCTTTTCTCGAGATTGGCTCAT
TAGTTTTTTCTGATTTTTTGCACAAAGATGCATAACTATAAACCCTCGAA
TGTGACGGAGCCCGATTTTCGAAAAAAAAAATTTTTAGGCAAATTTGGGC
CAAAAAACGACTAAAAACAGGTTTTTTGGACTTTGTGAAAAATTGGATCA
TTAATTTTTTCTGATTTTTTGTAGGATAGTAGGGTATCATCATAGGTGAA
AGATGGCTCAAGCAGATTTTTGCAAAAAAAATTTATTGGCTTAAAAAACG
CATGTTTATCTATAAGAATCAATATTAATAAGCATACATCAATGTTCTTA
GTCAAATTACTAAATTTTATTATTTTTTTACCTTTGGTTGCTTGGCGTGT
TTTTGTAGAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACATTATC
AATTACTTAGGTATTAGCTTTTCTCGAGATTGCCTGTTTCATTCTTTATT
ATTTTTGCACAAAGATGCGTAACTATAAACCCTCGAATGTGACGGAGCCC
AATTTTCGAAAAGAAATGTTTTTGGGCAAATTTTGGCCAAAAAACGGGTT
TTTTGGACTTTAAAAAATTGGATCATTAATTTTTTCAAATTTTTTTGAAT
GAAAATAGGTAAAAGATGGCTCAAGCAGATTTTTGTAAAAACGAATTTTT
TTAGCTCGAAAAACGCATCGTTATCTATAAGAATCACTATTAATAAGCAT
ACATCAATGTTCTTAGTCAAATTACTCAATATTTTGATGAGATCGATGTG
TTTTTTTGCTCACGAAGTCTTGAATATGAAAGAATATTTATAGAGCATGA
AATTTTGGTTTCTAAACGGTTTTTTATAAGAAACAAACGATTAATTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGTTTTATTT
TATTTTTATTTTCCAATTTATTTAACGTTGGGCTGACATCGTTATAATTA
AAAATACTAATTAATACCAACTATATAGAATACAATATAGTATAGAATAA
TAAATTTAAAATTTTTTTTTATGTGTATATTTTACAATGACAAATATTTG
TAAGATTTAGTTTTTCTTTCAGACTTTTTTTTTACAGTTTTTGTACGGGA
TTGTTGTGGTGAATATAAATACCTTTTTTACAGGTTTTGTACGGGAATGT
TGTGGTGCATATAAAAACTTTTTTTACAGGCTTTGTACGGGATTGTTGTG
GTGAATATAAAAACCTTTTTTACAGGTTTTGTACGGGATGGTTGTGGTGA
ATATAAAGACCTTTTTTACAGGTTTTTGTACGGGATTGTTGTGGTGAATA
TAAAGACTTTTTTACAGGTTTTGTACGGGAATGTTGTGGTGCATATAAAG
ACCTTTTTTACAGGTTTTTGTACGGGATTGTTGTGGTGAATATAAAAACC
TTTTTTACAGGTTTTGTACGGGATGGTTGTGGTGAATATAAAGACCTTTT
TTACAGGTTTTGTACGGGATGGTTGTGGTGAATATAAAGACCTTTTTTAC
AGGTTTTGTACGGGATTGTTGTGGTGCATATAAAAACTTTTTACAGGTTT
TGTACGGGAATGATGTGATGCATATTAAAACTTTTTTACCTGTTTTTACA
GGTTTTGTACGGGATTGTTGTGGTGAATATAAAGACTTTTTTACAGGTTT
TGTACGGGATTGTTGTGGTGCATAGAAAGACTTTTTTTACAGGTTTTGTA
CGGGAATGTTGTGATGCATATAAAGACTTTTTTACAGGTTTTGTACGGGA
ATGTTGTGGTGAATATAAAGACTTTTTTACAGGTTTTGTACGGGAATGTT
GTGGTGAATATTTATATTGTATCTGTGTGAAATCAAGTGCGTATTGTATC
TGTATTGGTGAATATAAAGACTTTTTTCTTTTCTCCATTTTTCAAGGTGA
ATGATTTCACGATCGCCGATCGACTCGATCGCGGTATGTTTGACATTTGC
GGATTCGATTCTAACGTACCTGATATGATCTGCGAGATCGCCAGAGGAAA
CATTTCTTAAAATCACCAAACAAAGAGAAATGAAATCTAAACTTTTCTGG
TTAGCCTTCGTTTACATGGCTCTAGCTGCTTGTGAATTTGGTGCTGGTGG
TCTTAACATTCTATCAGGAAAAACGGAATTGATACATTATCAACCAGCAA
AGAGAACGACCAACCTTGACTTATTGCAGGGTTCTTGGATTACTGGACAG
GTGGGTCAAGCAGGTGATACCAGTTCTGTTTTTCACTAATTGTGAAGATT
CGCAGATTAGCACCCGTGTTTTTCAATAGCCTGTTTTTTTTTTGGGGGGG
GGGGGTTGGAAATTGTAATTACGAAATCCCAAAAATAAGGTGAATATAGG
CTAAAATCAGGCTATTTAGAGCAGAATAGAATAAGGGTCCTTTTCTTTTA
AAGTTGAAAACAAAAATTAATAAATGGGGGGTTCTAATAAGGTCCGTGGG
GGGGGGGGGGCTGGAAAATTTTTCGAAAAATTAACAAGCGGGGCCCGTTT
GTTTGGAACCTAAGAGTACTTGGAGTTGTGCGGGATTCGATTGAGAAGCA
TAAATTAAGAATCAATAAAGAGAGTCATAAGGCAGGGAACAATGATATTG
ATATTGATGTATTTCTTGTATAGAAGCAGTTTACATAGAATGCTACACGT
TGAGGAGCTGGAAACCAGTGTTTCATTCTTTTCCAATTTGACTTTACTTC
AATAAACGATGAAATTTCATATACTGTACATACATGCAAGGAATCATTTC
AAGTTTTATATTTAATTTAATTTTATTTTATTTTATTGTAAACAAACTAT
AACATAATTTTACCATTTAATTTCTTAATTGCATTGAGTTTGAAGCTCTT
CTTTCGAAATTTGATCATTAAATTATACACAACTTTATATATTACTTTTA
TTGTGATTTGATTTCTTTCAAAAATCAATTTCTTTTGTATTTTTATAATC
GTTGGAATAATATATCAAAACATTTTGTTTTTCCTCTGTTGTCCAATTTC
CTTATTTCATTGCTTTTTAAGATGTACTTTGTTCCCGGGGGGGGGGAGTA
GGGTTTACCAACTGACGGTATGTGCGGCGAAAGAATTGGCTTTTAGAATT
GCACCCTTACAGTGCAGAAAAAAATCGGTGAAATTCATACCCTTACAGTG
CATTTTTTTCAAATTTTAAACTCTTTTAGGGTAGAAAAATCAAGATTTTT
GGGCAAAAATTTAAAATTTTTCCTACATTTGCTGAAATTTCCACCCTTAC
AGTGCATCATTTTATTTTGAAAAACATACCTTTAATCACCGCACATACCC
ATTGGTCAATTTGCCTGACTGCCTCCCCCCTGGGGCTTTGTTAGTATCTT
TGAAAGAGTATCTTTCTTAAAGTATTCTGTATTTACCTAATATCTATCAT
TTCTTTTATTTCCACAGAAAAAAAATAGAAAATTAATAAATAAACAAAAA
CACATTGACGGCCACCCTTAGAGGTGAAGAACCACAGCTACTATGGACCC
ATTCAAACAACTTGCCCTTTTGCAGGCTAAAATGGCCGGCATGAGTAGGG
CCCAGATTGAGGAAGCCATCCGAAACATGACCCTGGGAATAAACCCAACA
GAACAAGAGCCAGACCTTACTACACCACAAAATCAACCTTTGCAAGGACA
GTCACAAAACGCTGCAGGTGGTTTTTCCTATACTGTTGATAATATAACAA
GACTGAAAAGATATCTGATATTAGGTTCAGATAAAGCAAAATACAAGGGT
GGCTCTCAAGCAGAAAATGTTCAAAATATTCCAGTTGTTGAAGAACTTTT
AAAGGAGGGCAAAGGAAAGGAGGTGATTGATTTGATCGTTCAATTTGCTC
GTGAAGCACGTATCTCAAAGGAGGAGAACATTTTGATGGTATTACGTGAT
TGTATGATGTATCAGGGAGATGCCATGTATGAAGATAGGACAATACAACG
AGCTGCTTATGATAGTATTGTCAAAATCTGTAATATCCCAACCAAGCTTT
TCCGATTGATGGAGCTTTGTGAACCATGTTATCAAAATAATTGGAAACCT
TCAACCAAGCCAGTCAGTAAGACGCAACTACGGAAGAAAGCAAAACAAGA
GGCAATACAAGCAGCTCAACAGCAGAACCCAGGGCCTTCCACCTCCACCG
AAACCGCAGCCGCTCAACCACCGTCAGCAAAAGTGCCAGTTGAAACATGT
GAAATTGTTGAAGAGGGTGAACCTCCCAAGAAAAAGAAAAAGAAGACGAA
GAAGAAGAAAAAACCAAAGGAACCCAAACCTCAAACAACGCAAAGGTTCA
AAAAATCTTCCAGTTGGGGANGAAAAAACCAAAGGAACCCAAACCTTCCA
CAACGCAAAAGTTCAAAAAATCTTCAAGTTGGGGACGTGCTAGACGGCGT
GGTGTCGGCAATTTTTACACCGATTCAAATAAAGATGCCAATCGATTGTT
ATTGTTGATGACAAAGTACAAACAACGTCATAATTGGAACCATGTTCAAA
CGTTGGGTTATTGTCATCCAAAAATGACGGGAGACGAGGAACAAGCTAAA
AATATCGTCCTCCAGTATTGCACACGTGGCAAAGAAAAGTTGGACAAATA
TCTGGTCAAGAAAAAAATCGATGGGGTAACCATATCTCATTCCTTTCTAT
TTTATTTTTTTTAATTTGTAAGAAGAGATATCATAATGATACTTTCGTCA
CTGTCTTTGTAGTGAGAATTTATCTCGAATCTGTTCAAATGACACCACTT
ACTCTATTAATCTCCTAACATTTGCTTACATGGCATTTTTAATCTCGCGT
CGTGCGAGCACAAATTTTGATAATTTCTTTTGTTTGTTATACTTTGTCGG
CATAGAAGCTTCTTATTAAAAAAGAAGATCCTTATTATTTCCACACACTC
CCTGGAGCTGGTAATCGAAAAAGGTTGAATCCAAGTTTAGTAAATATCAT
GAAATTTTTCACATTGATAACAAGGTTTTCTTAATTTTTGGACTTTCTTT
CCAGAATCAACCAATGGATCCAATCACATCTCAAATATTACAACACATAA
AAGTTCTTGAGGAAGTCAAGAACCTGAAACCGGATGTCCCGGCCGATGTG
GAGAGATTGTTGCAATTGTTGCATCAATACGGTATTCGGGAGGTGCCACA
AGAATTTGAGGTGGACGCTGCAGGTCAGATGGTACAAGTGGAAAACACTC
AACGTAAAAAATGTTCTTTTCAACTGACCAGGGAGCATTTACCGAATGGC
TTCCAAAAATTGAAGGAGGTAATAGTTGATCAATTAAACGAAACTTAAAA
CCGCTAATATACGGTTTTTTCAATCCCGATCAGCCCGATCAGATTTTCTA
TTGATCGAAAGTTAGTCCTTGAAAGCTTGACTAAAAGCTCTTTTAATCGT
AATTAAATACTTAAATGGTTCCAATTTCACTCTACTCATGAATACCAATT
TTTCTCCCTTAAAATTTTTAGGTTTGGGTGGCTCTACTTCAAGACATGCC
CATGACAGCCTTGATCAGGAATCTCGGCAAAATGACTAGCCTTGGGCTCT
TTGATGATCCAGCAAACAGAGAAATCGTCAAGAAGGTTTTAGGGGATGGC
TCTATTTTGAACAAAGCAAGAATTCACCCAGTCAAGGTTTGCTATTTATT
TAGAGTGGCGGCCAAGGCGCATAAACCAGGGGCTCCCTGCATCTGTCGAT
GTTCCGATATTGAATAGGCTTTTTTCGAGCCCTTTTAGTTTTGGCGCACG
TTTTNTAAAAGTTCTTGAGGAAGTCAAGAACCTGAAACCGGATGTCCCGG
CCGATGTGGAGAGATTGTTGCAATTGTTGCATCAATACGGTATTCGGGAG
GTGCCACAAGAATTTGAGGTGGACGCTGCAGGTCAAATGGTACAAGTGGA
AAACACTCAACGTAAAAAATGTTCTTTTCAACTGACCAGGGAGCATTTAC
CGAATGGCTTCCAAAAATTGAAGGAGGTAATAGTTGATCATTTAAACGAA
ATTTAAAACCGCTAATATACGGTTTTTTTCAATCCCGATCAGCCCGATCA
GATTTTCTATTGATCGAAAGGTAATCTTTGAAAGCTTGACTAGAAGCTCT
TTTGATCGTAATTAAATACTTAAATGGTTCCAATTTTCACTCTACTCAAC
AGTACCAATCTTTCTCCATTAAAATTTTAGGTTTGGGTGGCTCTACTTCA
AGACATGCCCATGACAGCCTTGATCAGGAATCTCGGCAAAATGACCAGCC
TTGGGCTCTTTGATGATCCAGCAAACAGAGAAATCGTCAAGAAGGTTTTA
GGAGATGGCTCTATTTTGAACAAAGCAAGAATTCACCCAGTCAAGGTTTG
CTATTTATTTAGAGTGATGGCCAAGGCGCATAAACCAGGGGTTCAATGCT
TCTTTCTATGTTCCGATATTGAATAGGCTTTTTTCGAGCCCTTTTAGTTT
TGGCGCACGTTTTCTACACGACAATAAAAGCCGTGTGTAAATTTATGGAA
ACAAGACATATCTTTTTGCTTTTTGGTGATATTTAACGTTGAATTTCCAC
AGTCTTAAGGCCGGTCTCGCGCTGCTATCGCATTTTTTGGCTTCAGTGCT
TTTTGCTTGGATAAAAGATTGCGTCATAAAAATGTAGTGCGCGCTCGAAA
AAAAACTTTTTTCAACCGTTACGTCAGATCGCGCCAATGGAGTTGCTTCA
TTTTTCTTTTGACCAATAGAGTGGAAGCTTCGCTCGAAAAAGTGCGATCA
AAGCACGCGAAAGTGGAGACCGGCCTTTACACTGCACCTTACATGAATGA
TCAAATACCAACTATATATCCATGAAGGGAAAAGTAGAAGACTGTTTCTT
ACTTGATGAATTTGTAAGTGATGCACCGTGATTGAACCTGTAAGTAATGC
ACCCTGATTGAACCTGTGAGTAAAGCACCCTGATTGAACCTTGTTTCAGA
TTCTGTTAGCATCAAAGATGTATGAGCAAGGCCATGGTGATCAAGGCCAA
AGCCATCAACCACAACAAGAATATCCAACAATGAGTCTTTCTCAACAACT
ACGACAACAACGACAACGACAACAACAGCCACAACAACCACAACAACGAG
TACCAACCAAAGAACCACTTACTTGGATACCAAACGCTGAAATCTCCAAA
GCTCTCAATGATGCTTTCTACTTAAGTTTCAGGGTAAGCTCTACTTTAGA
GATGCAAGCATGGTTAACATAGTCAATCATTCTGGTATAGCGAATTCCTA
TGGCTCATTTGAACTTTTATATACTTGCTAAAATTGATTAGTCTTCTAGA
GAATCTCTTTTAATATTTCCATAGCAACCCGGCAAGAATTCTTCCTTCCG
TACGGACAAAAAGTTCATGTTAAATCTGGATGTTAGTGGCTCTATGGATT
GGCGTAACTGTGTAGGGTGTGATTTCCTGACGCCCGCTGCCGCCTCTTTC
GCCCTGGCCATGATTACGATGAAAGTTGAGCCACATTGTAGCGTGTTCGC
TTTCGGGCGCACGCTTCAAAATATCGATCATTTATTGAAGAGGGATATGA
CCATCCGTGAAGCCATTCAATTGGGACGCTCTGTAAGTCGACTTCACTAT
CAAGAAATCTCGTTTTGAATTATTCTCATTTCTTTATTTCTTCGAACTTG
TGTCTTACCTAAATCAGAATATACATCATTCTCAAAAAGTCAAAAATGTC
TACGGTTGACTCTCGCTAATTCCGAATTATATTTGAATCTTTCTAGAGTT
TAAANTTTTTCTCTTTATTTCTTCGAACTTGGGCCTCACATAAAACAGAA
CATCATTCTTAAAACGTCAAAAATGTCTACGGTTGACTCTCGCTAATTCC
GAATTATATTTGAATTTTTCTAGAGTTCGAACTAATTCCCAGTCTCCATC
AACGTAGAAGCCTCTTCATTTCGAATATTTCTGTAATTCGAGCAAATCAG
ACTTCCCTTTCGACTTTGAATGAGCGAGACTAAAATATATTTAAAAATCG
ACTTCCATGTCAATAGTTTAATTCCAAAATTTTCTGTGCTTCTTTTATCA
GTGATGTCATCATACCTCATTAACTTAGACCATCCGTATATCTTTCAGAT
CAACTTTGGTGCAACAGACTGTGCTCTACCAATGGTGCATGCCACGCAGA
ACAGACTGGATGTGGACGTTTTCATTGTTTACACTGACTCCGAAACTTGG
GTTGGAAAAGTTCATCCTTCTGAAGCTTTGAAGAATTATCGTCTAAAGAT
GAACAAACCGGATGCCAAACTCATTGTTATGGCAATGCAGGTTTGTCTGT
TCTCCATTTCACGGCCTGTAATGCTGGAATATATGCAGTCTGTTCCTCTA
AAGAATCCTGCATTGTAACACGCATGCTTAATTTGTCGTTCTTTAAACCA
TATATTATATAGTTAATTCCCGTGATAAACAAAGAAGAATGAATCTGTAG
GGTTGGTACAAGTCACTTTCAGTCGGGGCTGTGGACGGCGAAATATGTCG
TTTTTTATGAAATTTGTCGTTCTTTTTGTCTATTTTTAGTAATGCAGGAT
TCGTTAGATAAACCCCTCATGATATTATGATATCTCGTTATAAAAAGTGA
TGGCATGAATTCATTTCAGTCGGTTTCAATCCTGTAAAACCTTAAAAACA
CACGGTGAATAGTTCATCAACTTCTAGTTATTAGAATTCTGTAGATAACC
CTTTTCTTTTTCATTGTATTTGAACTTTTCGCACACTTGGGATTGTTGTG
GTGCATACAAAGACCTTTTTACTTCTCTTCATTTTTCAAGGTGAATGATT
TCACGATTGCCGATCCACTTGATCGCGGTATGTTTGACGTTTGCGGATTC
GACTCTAACGTACCTGATATGATCTGCGAGATCGCCAGAGGAAATATGTC
TTAAAATCACCAAACAAAGAGAAACGAAATCTAAACCTTTCTGGTTAGCC
TTTGTTTACATGGCTCTAGCTGCTGGTGATTTGGTGCTGGTGGTCTTAAC
ATTCATATCGGGAAAAATGGAATTGATACATTATCAACCAGCGCAGCAAA
GAGAATGACCATCATTGACTTATTGCAGGGTCCTTGGATTACTGGACAGG
TGGGTCAAGCAGGTGATACGAGTTCTGTTGTTCACTGACTGAGAAGATTC
GCAGATTAGGACCCGTGTTTTTCAGTAACCTGTTTTGGCACTAAATGCAA
AGGTAGAAACTTTTAAACACGTCCTATTCTATAATTTTACATAAATAATA
GTTTTGTTGAGCGACTGGAGTCACCTTTTCGTGAATCTTTGGTTTGTCAG
GGGGTTAAACCAACGTAGCCGAATGCCCTTCTATCAGCGGTACAAACCGT
AAACTGTATCAGCTGCTTGACCCACCCTATTGACACTATGCTATCCTTTG
GTAAATCCAAAGGCAAAGGCATGAACGAATATGAACATTAATTGACATAA
GATTCAAATGATGTATGGAAGCTAATACAAATGTTATTCGTAGATATTAT
TTGGATCAAGGGATAATTTAATAATAACAATGCTTGTTTTTGTATCATGT
ATTCAGTGTTTTATGCTTTTAACCATCTTTTTATACGGTCCATTTTAATT
TGTATACATAACTTCAACTAGGGTATAAACCTCTCGGATGGCTTCCTGGC
ACAAAGTAAGTTTGTTTTTTGGTAAGTTCAGGAAGTAGACAAAGATTTTG
TTTGAAAGACTCAGTCCAGGGTTTGCTTGTTAGTTTGTAGTTTTTCAATA
GATTTTATTATATTATTTCATTTACGCCTTATATTTGATTACTGTATTGT
CTAAACAATACTGCATGTTGCTATTCTGCGG

Coding sequence (CDS) from alignment at scaffold_58:1021292..1036772-

>TCONS_00071016 ID=TCONS_00071016|Name=TCONS_00071016|organism=Clytia hemisphaerica|type=CDS|length=2295bp|location=Sequence derived from alignment at scaffold_58:1021292..1036772- (Clytia hemisphaerica)
ATGGATCCATTCAAAAAACTTGCCCTTTTGAAGGCCAAAATGACCGGCAT
GAGTAGGGCCCAGATTGCGGAAGCCATCCGAAACATGACCCTGGGAATAA
ACCCAACAGAACAAGAGCCAGACCTTACTACACCACAAAATCAACCTTTG
CAAGGACAGTCACAAAACGCTGCAGGTGGTTTTTCCTACACTATAGATAA
TATAACCAGACTGAAAAGATATCTGATCTTAGGTTCAGATAAAGCAAAAT
ACAAGGGTGGCTCTCAAGCAGAAAATATTCAAAATATTCCAGTTGTTGAA
GAACTTTTAAAGGAGGGTAAAGGAAAGGAGGTGATTGATTTGATCGTTCA
GTTTGCTCGTGAAGCACGTATCTCAAAAGAGGAGAACATTTTGATGGTAT
TACGTGATTGTATGATGTATCAGGGAGATGCCATGTATGAAGATAGGACC
ATACAACGAGCTGCTTATGACAGTATCGTCAAAATCTGTAATATCCCAAC
CAAGCTTTTCCGATTGATGGAGCTTTGTAAACCATGTTATCAAAATAATT
GGAAGCCTTTAACCAAGCCAGTCAGTAAGACGCAACTTCGGAAGAAAGCA
AAACAAGAGGCAAAACAAGCAGCTCAACAGCAGAATCAAAGGCCTTCCAC
CTCCACCGAAATCCCAGCTGCTCAACCACCGTCAGCAAAAGTGCCAGTTG
AAACATGTGAAATTGTTGAAGAGGGTGAACCTCCAAAGAAAAAGAAAAAG
AAGATGAAGAAGAAGAAAAAACCAAAGGAACCCAAACCTCAAACAACGCA
AAAATTCAAAAAATCTTCAAGTTGGGGACGTGCTAGACGGCGTGGTGTCG
GCAATTTTTACACCGATTCAAGTAAAGATGCCAATCGATTGTTATTGTTG
ATGACGAAGTACAAACAACGTCATAATTGGAACCATGTTCAAACGTTGGG
TTATTGTCATCCAAAAATGACGGGAGACGAGGAACAAGTTAAAAACATCG
TCCTCCAGTATTGCACACGTGGCAAAGAAAAGTTGGACAAATATCTGGTC
AAGAAAAAAATCGATGGGAATCAACCAATGGATCCAATCACATCTCAAAT
ATTACAACACATAAAAGTTCTTGAGGAAGTCAAGAACCTGAAACCGGATG
TCCCGGCCGATGTGGAGAGATTGTTGCAATTGTTGCATCAATACGGTATT
CGGGAGGTGCCACAAGAATTTGAGGTGGACGCTGCAGGTCAGATGGTACA
AGTGGAAAACACTCAACGTAAAAAATGTTCTTTTCAACTGACCAGGGAGC
ATTTACCGAATGGCTTCCAAAAATTGAAGGAGGTTTGGGTGGCTCTACTT
CAAGACATGCCCATGACAGCCTTGATCAGGAATCTCGGCAAAATGACCAG
CCTTGGGCTCTTTGATGATCCAGCAAACAGAGAAATCGTCAAGAAGGTTT
TAGGAGATGGCTCTATTTTGAACAAAGCAAGAATTCACCCAGTCAAGATT
CTGTTAGCATCAAAGATGTATGAGCAAGGCCATGGTGATCAAGGCCAAAG
CCATCAACCACAACAAGAATATCCAACAATGAGTCTTTCTCAACAACTAC
GACAACAACGACAACGACAACAACAGCCACAACAACCACAACAACGAGTA
CCAACCAAAGAACCACTTACTTGGATACCAAACGCTGAAATCTCCAAAGC
TCTCAATGATGCTTTCTACTTAAGTTTCAGGCAACCCGGCAAGAATTCTT
CCTTCCGTACGGACAAAAAGTTCATGTTAAATCTGGATGTTAGTGGCTCT
ATGGATTGGCGTAACTGTGTAGGGTGTGATTTCCTGACGCCCGCTGCCGC
CTCTTTCGCCCTGGCCATGATTACGATGAAAGTTGAGCCACATTGTAGCG
TGTTCGCTTTCGGGCGCACGCTTCAAAATATCGATCATTTATTGAAGAGG
GATATGACCATCCGTGAAGCCATTCAATTGGGACGCTCTATCAACTTTGG
TGCAACAGACTGTGCTCTACCAATGGTGCATGCCACGCAGAACAGACTGG
ATGTGGACGTTTTCATTGTTTACACTGACTCCGAAACTTGGGTTGGAAAA
GTTCATCCTTCTGAAGCTTTGAAGAATTATCGTCTAAAGATGAACAAACC
GGATGCCAAACTCATTGTTATGGCAATGCAGGTGAATGATTTCACGATTG
CCGATCCACTTGATCGCGGTATGTTTGACGTTTGCGGATTCGACTCTAAC
GTACCTGATATGATCTGCGAGATCGCCAGAGGAAATATGTCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044129XLOC_044129Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071016-proteinTCONS_00071016-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071016-exon-scaffold_58-1575043694:1035625..1036772TCONS_00071016-exon-scaffold_58-1575043694:1035625..1036772Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1575043694:1025855..1026118TCONS_00071016-exon-scaffold_58-1575043694:1025855..1026118Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1575043694:1024778..1024942TCONS_00071016-exon-scaffold_58-1575043694:1024778..1024942Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1575043694:1023940..1024173TCONS_00071016-exon-scaffold_58-1575043694:1023940..1024173Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1575043694:1023541..1023798TCONS_00071016-exon-scaffold_58-1575043694:1023541..1023798Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1575043694:1022833..1023024TCONS_00071016-exon-scaffold_58-1575043694:1022833..1023024Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1575043694:1021292..1022332TCONS_00071016-exon-scaffold_58-1575043694:1021292..1022332Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1510915933:1035625..1036772TCONS_00071016-exon-scaffold_58-1510915933:1035625..1036772Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1510915933:1025855..1026118TCONS_00071016-exon-scaffold_58-1510915933:1025855..1026118Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1510915933:1024778..1024942TCONS_00071016-exon-scaffold_58-1510915933:1024778..1024942Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1510915933:1023940..1024173TCONS_00071016-exon-scaffold_58-1510915933:1023940..1024173Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1510915933:1023541..1023798TCONS_00071016-exon-scaffold_58-1510915933:1023541..1023798Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1510915933:1022833..1023024TCONS_00071016-exon-scaffold_58-1510915933:1022833..1023024Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1510915933:1021292..1022332TCONS_00071016-exon-scaffold_58-1510915933:1021292..1022332Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1491911889:1035625..1036772TCONS_00071016-exon-scaffold_58-1491911889:1035625..1036772Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1491911889:1025855..1026118TCONS_00071016-exon-scaffold_58-1491911889:1025855..1026118Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1491911889:1024778..1024942TCONS_00071016-exon-scaffold_58-1491911889:1024778..1024942Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1491911889:1023940..1024173TCONS_00071016-exon-scaffold_58-1491911889:1023940..1024173Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1491911889:1023541..1023798TCONS_00071016-exon-scaffold_58-1491911889:1023541..1023798Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1491911889:1022833..1023024TCONS_00071016-exon-scaffold_58-1491911889:1022833..1023024Clytia hemisphaericaexon
TCONS_00071016-exon-scaffold_58-1491911889:1021292..1022332TCONS_00071016-exon-scaffold_58-1491911889:1021292..1022332Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:1021292..1036772 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	2.73707e-05	0	0	2.38797	0.605264	6.75932	7.97234	0	0	0	0	0	0	0.000374762	2.94442	0.455465	0.279896	0	0	1.25284	0.288159	0.055111	0.0306657	0.68756	2.69674	0.14197	6.51035e-07	0.436011	2.10032e-05
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR008858TROVE_dom
IPR008979Galactose-bd-like
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
Blast
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BLAST of TCONS_00071016 vs. Swiss-Prot (Human)
Match: RO60 (60 kDa SS-A/Ro ribonucleoprotein OS=Homo sapiens GN=TROVE2 PE=1 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 6.136e-69
Identity = 164/485 (33.81%), Postives = 248/485 (51.13%), Query Frame = 3 
Query:  903 WGRARRRGVGNFYTDSSKDANRLLLLMTKYKQRHNWNHVQTLGYCHPKMTGDEEQVKNIVLQYCTRGXXXXXXXXXXXXIDGNQPMDPITSQILQHIKVLEEVKNLKPDVPADVERLLQLLHQYGIREVPQEFEVDAAGQMVQVENTQRKKCSFQLTREHLPNGFQKLKEVWVALLQDMPMTALIRNLGKMTSLGLFDDPANREI--VKKVLGDGSILNKARIHPVKILLASKMYEQGHGDQGQSHQPQQEYPTMXXXXXXXXXXXXXXXXXXXXXXVPTKEPLTWIPNAEISKALNDAFYLSFR--QPGKNSSFRTDKKFMLNLDVSGSMDWRNCVGCDFLTPAAASFALAMITMKVEPHCSVFAFGRTLQNIDHLLKRDMTIREAIQLGRSINFGATDCALPMVHATQNRLDVDVFIVYTDSETWVGKVHPSEALKNYRLKMNKPDAKLIVMAMQVNDFTIADPLDRGMFDVCGFDSNVPDMI 2345
            WGRA R+ + ++Y +  K    L L +TKYKQR+ W+H   L   H K + +      IV +Y T+G +++ +      +   + +   T ++L++++ +E+VK  + ++      ++ L+ ++                              +L REHL     K KEVW ALLQ+MP+TAL+RNLGKMT+  + + P N E+  V + L +  +L KARIHP  IL+A + Y+ GHG +G+                                       L W P+ EI KAL+ AFY +F+  +P       T K+F+L +DVS SM+ R  V    L  +  + A+ M+  + E    V AF   +  +   +  DMT+++ +     I  G TDC+LPM+ A +     DVFIV+TD+ET+ G VHP+ AL+ YR KM+ P AKLIV  M  N FTIADP DRGM D+CGFD+   D+I
Sbjct:  144 WGRALRKAIADWYNE--KGGMALALAVTKYKQRNGWSHKDLLRLSHLKPSSEG---LAIVTKYITKGWKEVHE------LYKEKALSVETEKLLKYLEAVEKVKRTRDEL-----EVIHLIEEH------------------------------RLVREHLLTNHLKSKEVWKALLQEMPLTALLRNLGKMTANSVLE-PGNSEVSLVCEKLCNEKLLKKARIHPFHILIALETYKTGHGLRGK---------------------------------------LKWRPDEEILKALDAAFYKTFKTVEP-------TGKRFLLAVDVSASMNQR--VLGSILNASTVAAAMCMVVTRTEKDSYVVAFSDEM--VPCPVTTDMTLQQVLMAMSQIPAGGTDCSLPMIWAQKTNTPADVFIVFTDNETFAGGVHPAIALREYRKKMDIP-AKLIVCGMTSNGFTIADPDDRGMLDMCGFDTGALDVI 530
The following BLAST results are available for this feature:
BLAST of TCONS_00071016 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RO606.136e-6933.8160 kDa SS-A/Ro ribonucleoprotein OS=Homo sapiens G... [more]
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