TCONS_00071375 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071375
Unique NameTCONS_00071375
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2789

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071375 ID=TCONS_00071375|Name=TCONS_00071375|organism=Clytia hemisphaerica|type=transcript|length=2789bp
CTGGCAATGATACAACTGAAAATATAGAACTACAAAGAACACCACTTATT
ATTACTATGTTAGTATAATAATCCATTCCACATCGAATGGCTAATGAGTT
TTTCACACACAAGATGCATCTTTATCTGAAGAGTGGAGAAAGTGAAAGAT
GGCTAACAGTTCAACTTGTTGACGGTCACATACCAAGAATTGCTGGTTTA
TCAGATGATGATACTCTAGCGGTATCAGACAATTTGGAACCAGCAATATG
GTTTCGCGTGATGGTCCTACAATCAATAACAATAGACTGTGATAAACGTG
TTGCTTGTTGGAGGAACGCTACTATCGACAAAACCACTGGTGAACCATTG
ACTCATTGGTTATCTGGAGAAGATAGTTTTTATGACTGGGATGATgatat
tgacgaacttttcaaTCTTGCATGCACTCTGGTTCAAGAAAATCCTCTCG
CTGAGCCCAATGAGGAATCAAGGAGAGAGAAAATTATTGTATACGAACAA
AATCTCTTTAAAATGTTGCACTGCTACGTGTTACCAAGGATCCAGCTTTA
TCCTGCTGATTTAGAAAGTGTCAACAATGCATTGAAAGCCCAAAACAAAG
CTATATCTCAACTCGAAGATGTGACCTTGATGCATACCCGATTAGCTGAA
CATTATATGACACAAATGAGGAATATCAGAGAGGTGGAAGTCTTACCAAT
GTTAGATGAGCTGGTGAACGGGGGACAAGTTAGTGAAGAGCTGTTTGAAA
CTTTGATGTATGATATCAAGAAGGCTGAACCAGCTCTTAGAAATGagATC
AACCAAGCACAACTGAAAGTCGATAATTTAAAAGAAGCCATGTCTAAAGG
AGCTGTCAGTCGAAAAATTACCAATGATTTAGCAGAAGCCAGACGTACCC
GAGATCAAGTTCACCAGAGTCTAGCGAACCTCCTAATGGGGAAAGCTTTG
GCTCAAACATCACTGGATATAGCACAACAAGTTCGAGATATGAAGATTGA
GTTGAATGAATCTTGTTCACAGTATGTTCGTTTGTATCGGAGAGTTAAAG
AAGAAAAGATGGTCTCAACTCAAACACTTGACAAGAAGTTACGAGCACTT
GGTGTACGCGAATGTATATTGTCAGTCATCAAAGATCTGGAGAAGGATAG
CCCAACATATGGTGAAGATCCCGAGATCAAAGAGACGAAACCAGAATGGC
AGACGTTGAACCAACGAATTTCATCCATTGTACACAACAAGGAACACCCT
GTTGGTATCAAGTTCAAAAACTTCACACAAGAATTGCAATTGAATTACCA
GAAGATCATGCGAACTACCGCTAATATCGTGTACGGCTCTTCGCGCTTCA
TGACCAGTTATAACGAGTTTTACGTCATCAGTGAACAAGATTTAGGATTG
AATAAAGTCTTCTTGACTGACCAATGTAATGTCGTATTACAGCATTTGTA
CATGGTGTCTGAGCTTCTCTCCGAACACTTCAGTAAGCGGACACAAATGT
TTATGCGAAAAGTGAggttatgttatgagaaatgtTTCTTTAATCGAATC
GGGAGAGATTTGATTCTAGTCTATCGTGTTGTGCATGGGAAAGTTATGCA
AACTATTGAAGCACGAGTGAATGCTTTAAGAGAATTGAGTGTTTGTAAGC
TAGGCTTGCAGATGCGTGATGAATGGTGGTTGGAGTTGTTTGAACCTGAT
CATGAAACGAATTCGTTTGAATACTCGGAACCTGAAATGTCGGATGCATC
GAATACCGAGGGCCGATCGTATGAAGGTGAGTTCGGTGACGATGAATCAA
CGAGTGATATCTCGGATGAAGATTTCTGTTCCGACGATGAATCGGGCGCC
TGTAAGATGCCAATGAACCCGTGGCGAGTACCGATCACCGATCCGGGTCA
TAAAGAAATAACACAGAATTTATTGCGAAGTAAAAATAAAGTGTTGTCGC
GATCTTTGCAAAATCTTCACGACTATGGAATGAATCTTATTGAAGCAAGT
ACGAAATTATTGGAGGATCGGTTTGAGAAGACTGCTTTTGAGACCTCGCC
TGAACTTAACGTTGAAGTTTTCGGGCGTTATCTAGCTGACGAGATAGATG
AGAAAAAGGAGCATAACATCCGTGAAAATATTCGTCGTTCACAAAGCGTC
AACACTATTTTGCATTCTGAATCGTCACATGGTAGCCGTCGCTCGAGTTT
GAGACGTACTTCTATACGACACGCTGAAGATACATTTGAAAAGCATTTTG
GTAGTGCTATATCACAGATTCGATGTATCTTTACGAATTCAAGTCCGTTA
AAGAAAATGCAGTGCTTGACGAATGCGCTTAGGACTGTATCTGAGAAAAT
TGTCGAGTTGCGGTtacgtctttatgaagaaggcACTGAAGTTGATCGTT
CGAAAGTTGCCGTATCTGCAGACGATTTATTGCCGTTGCTTGTATTGTTG
CTGTTGAAAATGGAACCACACGACGTTGCGAAACTGTACACGGAACTGAT
CTTTATTTCTGACTTGATGGCGGATTTTTTGAGCTCAGGTGTACATTCAT
ACGCCCTCTGTGAGTTTCATATTGCCTTTCGTGTGCTAGACCAAACTTGT
GAAGAGTTACAGCTATAATCAATATCAAAATGATATTCTTgtgttatttc
aaaaaaaaggcaTGTAAGTAAtgaattattttcttattaGATTTGTAAAT
TTTCTCACATCAAAATCTTACAGTTTATTCTTCGTTTATCATTTTTAAGT
AAGAGTTTGTGtatacagtagactctcgcttatccgaat
Run BLAST on NCBI

protein sequence of TCONS_00071375-protein

>TCONS_00071375-protein ID=TCONS_00071375-protein|Name=TCONS_00071375-protein|organism=Clytia hemisphaerica|type=polypeptide|length=843bp
MANEFFTHKMHLYLKSGESERWLTVQLVDGHIPRIAGLSDDDTLAVSDNL
EPAIWFRVMVLQSITIDCDKRVACWRNATIDKTTGEPLTHWLSGEDSFYD
WDDDIDELFNLACTLVQENPLAEPNEESRREKIIVYEQNLFKMLHCYVLP
RIQLYPADLESVNNALKAQNKAISQLEDVTLMHTRLAEHYMTQMRNIREV
EVLPMLDELVNGGQVSEELFETLMYDIKKAEPALRNEINQAQLKVDNLKE
AMSKGAVSRKITNDLAEARRTRDQVHQSLANLLMGKALAQTSLDIAQQVR
DMKIELNESCSQYVRLYRRVKEEKMVSTQTLDKKLRALGVRECILSVIKD
LEKDSPTYGEDPEIKETKPEWQTLNQRISSIVHNKEHPVGIKFKNFTQEL
QLNYQKIMRTTANIVYGSSRFMTSYNEFYVISEQDLGLNKVFLTDQCNVV
LQHLYMVSELLSEHFSKRTQMFMRKVRLCYEKCFFNRIGRDLILVYRVVH
GKVMQTIEARVNALRELSVCKLGLQMRDEWWLELFEPDHETNSFEYSEPE
MSDASNTEGRSYEGEFGDDESTSDISDEDFCSDDESGACKMPMNPWRVPI
TDPGHKEITQNLLRSKNKVLSRSLQNLHDYGMNLIEASTKLLEDRFEKTA
FETSPELNVEVFGRYLADEIDEKKEHNIRENIRRSQSVNTILHSESSHGS
RRSSLRRTSIRHAEDTFEKHFGSAISQIRCIFTNSSPLKKMQCLTNALRT
VSEKIVELRLRLYEEGTEVDRSKVAVSADDLLPLLVLLLLKMEPHDVAKL
YTELIFISDLMADFLSSGVHSYALCEFHIAFRVLDQTCEELQL
Run BLAST on NCBI

transcript from alignment at scaffold_60:869075..877570-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071375 ID=TCONS_00071375|Name=TCONS_00071375|organism=Clytia hemisphaerica|type=transcript|length=8496bp|location=Sequence derived from alignment at scaffold_60:869075..877570- (Clytia hemisphaerica)
CTGGCAATGATACAACTGAAAATGTAAGTTTTGAAGATATAATTTTGTAT
TTTACTTTATCTATGATGACTTGCTTAAGCCATCACCTATAATATGTCAA
AATTAAGGAAGTAAAGGAGAGCTTTTTATTCATTGTTTTATCCTGTCCAT
CATTTGTCATTCATTGCCATTGGCTACCTTTCTCCTTCTCCAGGCTTCTG
TGGTTTCACACACAGTAAGCAGAGATATCTGTGATATCCTTATTTTCATT
TAATGCTCTTTTAATGGTGTTTGCATTTTACTTTCACTTTAGCAGTTACA
TCAATATGCCTTCTTACCTGTCTTTAAAAATATAAATAAAAGTAATCACG
GAAAAGGACGCGAAAAAAAAGACATAAGAGTAAGAACAGAGGAATCAAAC
TCGTTAGAAAAAGTACCACTAGAAGTCATAAAAAATCAACCTGAATAAAT
GCAATCGAAATTCCAGAGAACTGCATAATTCCCCAAACAACATTACATTA
CTATGTCAAACTCCCATCACATATAAATTTTACAATTACGTCAGAGTAGA
CTACGCTCGTCACCGAAGAGGTTTATTTGGAAAGGGTAATGATATTTCAT
TGTTCGCTTCTTTTTTAAAGATTCGCCGGGTTGGAAAAATATGAATTTCT
TTGTACATATTTTACCTACCCCAAATATTTAGGAGGCTGAGTTTTAAACG
AATTGTCAAGTTGAAACGAACGATAAATGTATCAAGGTCTGTTTTATTTA
CCCCCTGGTGACTTTACAAAAGAGACTTAACTCGATGTTACAATCCAATT
ATTGAAAGTTTGTCTCGGCCTTTTTATAATGAGCGAGACATACGTTCTCT
GATTACGCAATTTTCATATTGACATTTTCGAGGCATTTTGATGTAACTGT
TTAGCCAGCTTTCTGTAGGTAGAAGAAGAAAAAGTTTGTGTCAAGCTCTA
GCCTTGCTAGCTAACAACAATCAAGGGGGGGGTTTCAGGGGGTACCCGAT
TCTGTAATTCCGCCAATTTTTTCTCCAATTTCCGTCACACCGTCTTAAAT
TGAACCAAAATTCCGTCACCGAGAATTCCTTTGAAATTCAATATTTTTGT
CGAAAATTCCGCTAATTTTGAAAATCTTTTACCAATTCCGAAATTCCGCA
AATTTTTTTGCTAAATTCCGTTTTTCCGCACTAAAATTGTCTAATTTTCC
GTCTCCGTCAGAGAACCCAATTTCCGTAATTCCGTCTAAATTTTCGCCAA
ATTCCCCCCCCCCGTCCGAAAAAAGGGCCGATTCCGCCCCCCCCCCAACC
ATGAAACCCCCCCCCCCAATCAAGGTCATAATATTTGAGAAAAAAGGGAA
ATTCCCCAGAAAGTTTTGAAACCACCAGCGATTTGTAAGTGCTCCAAAGT
AGGTTCAAAGGGTAGAGTTTTAACTCTGATTTTTAACGCTTGAGGATAAA
GTTTTTTTTGGTATACTTTTTTAACACCTAAAGATTTGAGGGCCTTTTGA
ATGTTTTGATTGTCAAAAGAAGAATAAAAAAGAATTGCTAAAATCGAAAA
ATCTTAACAAATGTCAATTAACTTCAATAGACCTTTTTTCAAACAGGAGG
TCCTGTTGAATAATTATGTAGTCCATCCAGCCATAAAAACAATGATAGAG
CCATGCATAATTACTGTATCATGCATATTGTAATAATTATGCATGGTTTT
ATCGTTGTTTTTCTGCTGGACTACACAATAGACCTTTTTTCAAAGAGGCC
ACCCTGTTAAATAATTATATGCTAGAATTTCCATCTGGGGGGTTAGGACA
CTCTCCAATATCCTTAAAGTCTCAAAAGACTGAGGAGAGGAGCTTTTTCT
TGCATAAAGTACCCATATACAGCAGACAGAATTCACAGAGCGTACACGCG
CGGGCGATTAAACACGATCTCGCGGAATGCGGGTCAAAAATTCCCGTAAG
CAATCTCGTTATTTATCAATGTATGTATGTATGTAATAGTTTATTTCAAG
TTGACGAACAGGTAGCAACAAAGGCTAATAAAAGTCAACGCTACTTTACA
ATTTGTAAGGTGATTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCTTGAAAATCCGTATGCTTCAAGTTTAGCAATCAATAGTTCGT
GCGAGATGCAGTCGAAAGCTTTTGATAAGTCAATGAGTAGCGCTGCAAAC
TTTTTCTTTTCATATCAAAAAGTGAACCGTCTCTATTGGTGCCATGTTGA
ATGATTGAAAATCCCAGCATCAAAACAATGATAAGTTCTTGAACATGTAA
CATGGGACTTGTTGATATCTGGCCTGTATTTTTACTTACTGTTAAATCAC
TTTGACAACAATTTGTTTTGATACTTCCACCAAGTTTGTCAATCACACTT
CTTCTGTTATTCATATATCACAAAAATAGATATGTCTAGAAAAGCTGCTT
TTTGAAATAAGCGTATTTATATCTTATAGTATTTATCAGGATGAAACTCC
ATCAATCATTTCTTGTCTCACGAGACAAGTTGGTCAAGGTTGGATTGTAA
TGTAATGAAAGTAAATCATTTAGGCAATATGAACAAATTCATACAGTTTA
TCAATTACTTTATACAAATGTTTTGTGTTCAACAGCTCAAATTTGATTGG
ATCGATGAAAGATGGATTTCATAGATAGAACGAAACAATTGTATTCAGCT
AATCGATACACGATTCTGATTTATTAAAAATCTTAGGAAAAGTAGTTTTC
TTCTCAGAAAGCTGCAATATTATATTCATTTGACTATTGGTGATCCACTG
AAGGACTTAATAGTTTAATGAGTTATGTTTAAAACACAATAATGAAGTAA
AGAATTTATTGCTATTTTATTGCTGTATCGAGATAAAAAGTTATAATACA
CTAAAGGTATATTTACAAAACCTGCTACGGGATCTAACAATTCATTGAAT
AAAGGATCACTTTCTAATGGTTATAGTTGTAGAGCCAATGTTTTATTGCT
ACAATTATTTCAAATTATCAAATTATATTTTCTTTATTATAGAAATTTTC
TGTATGCGCTATTAGATGGACAAATTGTTCACTTTATCAACCCTTCTACT
TTTAGATAGAACTACAAAGAACACCACTTATTATTACTATGTTAGTATAA
TAATCCATTCCACATCGAATGGCTAATGAGTTTTTCACACACAAGATGCA
TCTTTATCTGAAGAGTGGAGAAAGTGAAAGATGGCTAACAGTTCAACTTG
TTGACGGTCACATACCAAGAATTGCTGGTTTATCAGATGATGATACTCTA
GCGGTATCAGACAATTTGGAACCAGCAATATGGTTTCGCGTGATGGTCCT
ACAATCAATAACAATAGACTGTGATAAACGTGTTGCTTGTTGGAGGAACG
CTACTATCGACAAAACCAGTAAGTGTTGTATATTGATGTATCTATGAATA
AGTTGAGAAGAAGTTAACCCAGTAATTTTTTATCTTTAGTTCTCTGTTCT
TCAAAAAAATAATATGTAAATAGGTTTTGATGAAATAAGTTCCAATTAGG
ATCCCATTTAACAATAGAATAATGATTTTCAATGTGTTATCTATCTACAT
ATTTTATTTTAACTTTTTTTCCTGGTGTCCTTGCTAAATAATTAGCGTAA
ACTCAATCTAAAATTGTCATTGTATCACTCTTTTACAGCTGGTGAACCAT
TGACTCATTGGTTATCTGGAGAAGATAGTTTTTATGACTGGGATGATGAT
ATTGACGAACTTTTCAATCTTGCATGCACTCTGGTTCAAGAAAATCCTCT
CGCTGAGCCCAATGAGGTTTGACCCTTCTATTTTGATTATTTATTATTGT
GCGTAATTAATTAATTAATGAATTTTATATTTGATGATATATTGATATAA
AGAATGAAACACTAGTAACTTGTTTAAGTTAGACTTCCATGGTATATTTT
CATGACTACTAGAAACTATGTTCCCTTATTTGATAACTCAATAATTAAAT
TCACATGTGCTCAGAAATAGATTATTTATGACGATGGAGATTTCAAACAA
CTTTATCAGGTAATTTATTACCTAAATTTTTCTTCATGTTTATTTTTTCA
CTTTAGGAATCAAGGAGAGAGAAAATTATTGTATACGAACAAAATCTCTT
TAAAATGTTGCACTGCTACGTGTTACCAAGGATCCAGCTTTATCCTGCTG
ATTTAGAAAGTGTCAACAATGCATTGAAAGCCCAAAACAAAGCTATATCT
CAACTCGAAGATGTGACCTTGATGCATACCCGATTAGCTGAACATTATAT
GACACAAATGAGGAATATCAGAGAGGTGGAAGTCTTACCAATGTTAGATG
AGCTGGTGAACGGGGGACAAGTTAGTGAAGAGCTGTTTGAAACTTTGATG
TATGATATCAAGAAGGCTGAACCAGCTCTTAGAAATGAGGTATATTTTTT
TCTTTTGAACTAACATAGTAGTTTTTTTCGAAGTTTTTCAAAAACATGAA
AACACTTTTTGCTTTTAACGACTTCGGCCTGATTATACCTGTTCAAAATA
TCCAAATCTTATTTTACCACGAAAGTCCCAAGAAATTGAGCTTAAGTTGG
TGCAACAAGAGGTTTTGCATGATTCAGAGGTTTTTTCTTAATTCATTTTC
ACAGATCAACCAAGCACAACTGAAAGTCGATAATTTAAAAGAAGCCATGT
CTAAAGGAGCTGTCAGTCGAAAAATTACCAATGATTTAGCAGAAGCCAGA
CGTACCCGAGATCAAGTTCACCAGAGTCTAGCGAACCTCCTAATGGGGAA
AGCTTTGGCTCAAACATCACTGGATATAGCACAACAAGTTCGAGATATGA
AGATTGAGTTGAATGAATCTTGTTCACAGTATGTTCGTTTGTATCGGAGA
GTTAAAGAAGAAAAGATGGTCTCAACTCAAACACTTGACAAGAAGGTAAA
CAAATTTCTAAAACAAACTGTAATGGAAGCCTGGAATTAGACAATCAACC
GGAGAAATTTCTTAACTTTTCTTTATAGTATTTTTCAAAATGTTTGTTGT
AAAAGGTTTTTTCCAAATTTGGTTTTGGATTGTTAGCGCAAGCAATTTAA
AGCTTTACCAAAATGACGTTTGAAATTTTCCTCGTCAAAAATGTCTTGCT
ATAAATAAGACCAAGTTACTATAGTCCTTAATAGCCCTGACCTCATTAAA
GGTCGAATTATGCATTTGAGATCATAATTAAATTGGTTAGAAAAACCGAA
AGCAGGAAAATTAAATTTTTTCAATTTTCCTCTCACATGGTTACTATGTA
ACAATAAACAAAGTCTGGGTCATCGACATTTCATTATTAATAGAGAATGA
ATAAGGATGAAGACAATTTCAAGTATAGTAGAACCTTCTGTAAGTTTATC
CAATGCTTTAAAGGATAAAATTTTCTTTTTGCCGCGATTTAGCCAAATAA
GCTGGTCCTTGTAAGCGGAATTTTGTCTGCTGATAGACTACTAAGAGAAA
TCTTCAACGTTAGTCTGGTGAAAAAAGTTTTGCTGTTTACATCGTGAATC
CTTTGAAAGATAGAAAAGAATATGATTTTTTTTACTCTTTTTCAATTTAT
CAATTCTGTAGTTACGAGCACTTGGTGTACGCGAATGTATATTGTCAGTC
ATCAAAGATCTGGAGAAGGATAGCCCAACATATGGTGAAGATCCCGAGAG
TAAGTGACTATATTCTTCTGGTTTGTTCCTGTGGTGTGTCTTTTACATAA
ATAAAGTGGCAGACCATCAGCGACATGTACATTTTTGGCCGAATTAGCAT
TAGCATTAGTAGTATTAACCTACCTCTAGATTTAGAGAAGGATAGTCCAA
CATATGGTGAAAATGTTTTGTATGGCTTAAATAAAGGTCAGCTTCATGTA
CATTTTTTTGGAGAGATTCTTATACTCGTTACAATTTTTTAGATTGCAAA
CACTCAAGAGTAAGTTTTTCTTTAGTCAAAGTTACTGAGAAACTCACTCA
GGACTTGTTGGTTACTATTTTACCCGCAAATTGCATTATGGAGATTGCTT
TACCAAGAGCTTTGCCAATCTTGTTATTTTACTTCCGTTTTTTTTTTTGG
TAAAGCTACACTATTTATTGACCCTTCTTTTAGTCAAAGAGACGAAACCA
GAATGGCAGACGTTGAACCAACGAATTTCATCCATTGTACACAACAAGGA
ACACCCTGTTGGTATCAAGTTCAAAAACTTCACACAAGAATTGCAATTGA
ATTACCAGAAGATCATGCGAACTACCGCTAATATCGTGTACGGCTCTTCG
CGCTTCATGACCAGTTATAACGAGTTTTACGTCATCAGTGAACAAGATTT
AGGATTGAATAAAGTCTTCTTGACTGACCAATGTAATGTCGTATTACAGC
ATTTGTACATGGTGTCTGAGCTTCTCTCCGAACACTTCAGTAAGCGGACA
CAAATGTTTATGCGAAAAGTGAGGTTATGTTATGAGAAATGTTTCTTTAA
TCGAATCGGGAGAGATTTGATTCTAGTCTATCGTGTTGTGCATGGGAAAG
TTATGCAAACTATTGAAGCACGAGTGAATGCTTTAAGAGAATTGAGTGTT
TGTAAGCTAGGCTTGCAGATGCGTGATGAATGGTGGTTGGAGTTGTTTGA
ACCTGATCATGAAACGAATTCGTTTGAATACTCGGAACCTGAAATGTCGG
ATGCATCGAATACCGAGGGCCGATCGTATGAAGGTGAGTTCGGTGACGAT
GAATCAACGAGTGATATCTCGGATGAAGATTTCTGTTCCGACGATGAATC
GGGCGCCTGTAAGATGCCAATGAACCCGTGGCGAGTACCGATCACCGATC
CGGGTCATAAAGAAATAACACAGAATTTATTGCGAAGTAAAAATAAAGTG
TTGTCGCGATCTTTGCAAAATCTTCACGACTATGGAATGAATCTTATTGA
AGCAAGTACGAAATTATTGGAGGATCGGTTTGAGAAGACTGCTTTTGAGA
CCTCGCCTGAACTTAACGTTGAAGTTTTCGGGCGTTATCTAGCTGACGAG
ATAGATGAGAAAAAGGAGCATAACATCCGTGAAAATATTCGTCGTTCACA
AAGCGTCAACACTATTTTGCATTCTGAATCGTCACATGGTAGCCGTCGCT
CGAGTTTGAGACGTACTTCTATACGACACGCTGAAGATACATTTGAAAAG
CATTTTGGTAGTGCTATATCACAGATTCGATGTATCTTTACGAATTCAAG
TCCGTTAAAGAAAATGCAGTGCTTGACGAATGCGCTTAGGACTGTATCTG
AGAAAATTGTCGAGTTGCGGTTACGTCTTTATGAAGAAGGCACTGAAGTT
GATCGTTCGAAAGTTGCCGTATCTGCAGACGATTTATTGCCGTTGCTTGT
ATTGTTGCTGTTGAAAATGGAACCACACGACGTTGCGAAACTGTACACGG
AACTGATCTTTATTTCTGACTTGATGGCGGATTTTTTGAGCTCAGGTGTA
CATTCATACGCCCTCTGTGAGTTTCATATTGCCTTTCGTGTGCTAGACCA
AACTTGTGAAGAGTTACAGCTATAATCAATATCAAAATGATATTCTTGTG
TTATTTCAAAAAAAAGGCATGTAAGTAATGAATTATTTTCTTATTAGATT
TGTAAATTTTCTCACATCAAAATCTTACAGTTTATTCTTCGTTTATCATT
TTTAAGTAAGAGTTTGTGTATACAGTAGACTCTCGCTTATCCGAAT

Coding sequence (CDS) from alignment at scaffold_60:869075..877570-

>TCONS_00071375 ID=TCONS_00071375|Name=TCONS_00071375|organism=Clytia hemisphaerica|type=CDS|length=2532bp|location=Sequence derived from alignment at scaffold_60:869075..877570- (Clytia hemisphaerica)
ATGGCTAATGAGTTTTTCACACACAAGATGCATCTTTATCTGAAGAGTGG
AGAAAGTGAAAGATGGCTAACAGTTCAACTTGTTGACGGTCACATACCAA
GAATTGCTGGTTTATCAGATGATGATACTCTAGCGGTATCAGACAATTTG
GAACCAGCAATATGGTTTCGCGTGATGGTCCTACAATCAATAACAATAGA
CTGTGATAAACGTGTTGCTTGTTGGAGGAACGCTACTATCGACAAAACCA
CTGGTGAACCATTGACTCATTGGTTATCTGGAGAAGATAGTTTTTATGAC
TGGGATGATGATATTGACGAACTTTTCAATCTTGCATGCACTCTGGTTCA
AGAAAATCCTCTCGCTGAGCCCAATGAGGAATCAAGGAGAGAGAAAATTA
TTGTATACGAACAAAATCTCTTTAAAATGTTGCACTGCTACGTGTTACCA
AGGATCCAGCTTTATCCTGCTGATTTAGAAAGTGTCAACAATGCATTGAA
AGCCCAAAACAAAGCTATATCTCAACTCGAAGATGTGACCTTGATGCATA
CCCGATTAGCTGAACATTATATGACACAAATGAGGAATATCAGAGAGGTG
GAAGTCTTACCAATGTTAGATGAGCTGGTGAACGGGGGACAAGTTAGTGA
AGAGCTGTTTGAAACTTTGATGTATGATATCAAGAAGGCTGAACCAGCTC
TTAGAAATGAGATCAACCAAGCACAACTGAAAGTCGATAATTTAAAAGAA
GCCATGTCTAAAGGAGCTGTCAGTCGAAAAATTACCAATGATTTAGCAGA
AGCCAGACGTACCCGAGATCAAGTTCACCAGAGTCTAGCGAACCTCCTAA
TGGGGAAAGCTTTGGCTCAAACATCACTGGATATAGCACAACAAGTTCGA
GATATGAAGATTGAGTTGAATGAATCTTGTTCACAGTATGTTCGTTTGTA
TCGGAGAGTTAAAGAAGAAAAGATGGTCTCAACTCAAACACTTGACAAGA
AGTTACGAGCACTTGGTGTACGCGAATGTATATTGTCAGTCATCAAAGAT
CTGGAGAAGGATAGCCCAACATATGGTGAAGATCCCGAGATCAAAGAGAC
GAAACCAGAATGGCAGACGTTGAACCAACGAATTTCATCCATTGTACACA
ACAAGGAACACCCTGTTGGTATCAAGTTCAAAAACTTCACACAAGAATTG
CAATTGAATTACCAGAAGATCATGCGAACTACCGCTAATATCGTGTACGG
CTCTTCGCGCTTCATGACCAGTTATAACGAGTTTTACGTCATCAGTGAAC
AAGATTTAGGATTGAATAAAGTCTTCTTGACTGACCAATGTAATGTCGTA
TTACAGCATTTGTACATGGTGTCTGAGCTTCTCTCCGAACACTTCAGTAA
GCGGACACAAATGTTTATGCGAAAAGTGAGGTTATGTTATGAGAAATGTT
TCTTTAATCGAATCGGGAGAGATTTGATTCTAGTCTATCGTGTTGTGCAT
GGGAAAGTTATGCAAACTATTGAAGCACGAGTGAATGCTTTAAGAGAATT
GAGTGTTTGTAAGCTAGGCTTGCAGATGCGTGATGAATGGTGGTTGGAGT
TGTTTGAACCTGATCATGAAACGAATTCGTTTGAATACTCGGAACCTGAA
ATGTCGGATGCATCGAATACCGAGGGCCGATCGTATGAAGGTGAGTTCGG
TGACGATGAATCAACGAGTGATATCTCGGATGAAGATTTCTGTTCCGACG
ATGAATCGGGCGCCTGTAAGATGCCAATGAACCCGTGGCGAGTACCGATC
ACCGATCCGGGTCATAAAGAAATAACACAGAATTTATTGCGAAGTAAAAA
TAAAGTGTTGTCGCGATCTTTGCAAAATCTTCACGACTATGGAATGAATC
TTATTGAAGCAAGTACGAAATTATTGGAGGATCGGTTTGAGAAGACTGCT
TTTGAGACCTCGCCTGAACTTAACGTTGAAGTTTTCGGGCGTTATCTAGC
TGACGAGATAGATGAGAAAAAGGAGCATAACATCCGTGAAAATATTCGTC
GTTCACAAAGCGTCAACACTATTTTGCATTCTGAATCGTCACATGGTAGC
CGTCGCTCGAGTTTGAGACGTACTTCTATACGACACGCTGAAGATACATT
TGAAAAGCATTTTGGTAGTGCTATATCACAGATTCGATGTATCTTTACGA
ATTCAAGTCCGTTAAAGAAAATGCAGTGCTTGACGAATGCGCTTAGGACT
GTATCTGAGAAAATTGTCGAGTTGCGGTTACGTCTTTATGAAGAAGGCAC
TGAAGTTGATCGTTCGAAAGTTGCCGTATCTGCAGACGATTTATTGCCGT
TGCTTGTATTGTTGCTGTTGAAAATGGAACCACACGACGTTGCGAAACTG
TACACGGAACTGATCTTTATTTCTGACTTGATGGCGGATTTTTTGAGCTC
AGGTGTACATTCATACGCCCTCTGTGAGTTTCATATTGCCTTTCGTGTGC
TAGACCAAACTTGTGAAGAGTTACAGCTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044353XLOC_044353Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071375-proteinTCONS_00071375-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071375-exon-scaffold_60-1575043694:877548..877570TCONS_00071375-exon-scaffold_60-1575043694:877548..877570Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1575043694:873403..873715TCONS_00071375-exon-scaffold_60-1575043694:873403..873715Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1575043694:873005..873132TCONS_00071375-exon-scaffold_60-1575043694:873005..873132Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1575043694:872382..872714TCONS_00071375-exon-scaffold_60-1575043694:872382..872714Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1575043694:871876..872166TCONS_00071375-exon-scaffold_60-1575043694:871876..872166Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1575043694:871122..871209TCONS_00071375-exon-scaffold_60-1575043694:871122..871209Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1575043694:869075..870687TCONS_00071375-exon-scaffold_60-1575043694:869075..870687Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1510915933:877548..877570TCONS_00071375-exon-scaffold_60-1510915933:877548..877570Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1510915933:873403..873715TCONS_00071375-exon-scaffold_60-1510915933:873403..873715Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1510915933:873005..873132TCONS_00071375-exon-scaffold_60-1510915933:873005..873132Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1510915933:872382..872714TCONS_00071375-exon-scaffold_60-1510915933:872382..872714Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1510915933:871876..872166TCONS_00071375-exon-scaffold_60-1510915933:871876..872166Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1510915933:871122..871209TCONS_00071375-exon-scaffold_60-1510915933:871122..871209Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1510915933:869075..870687TCONS_00071375-exon-scaffold_60-1510915933:869075..870687Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1491911889:877548..877570TCONS_00071375-exon-scaffold_60-1491911889:877548..877570Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1491911889:873403..873715TCONS_00071375-exon-scaffold_60-1491911889:873403..873715Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1491911889:873005..873132TCONS_00071375-exon-scaffold_60-1491911889:873005..873132Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1491911889:872382..872714TCONS_00071375-exon-scaffold_60-1491911889:872382..872714Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1491911889:871876..872166TCONS_00071375-exon-scaffold_60-1491911889:871876..872166Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1491911889:871122..871209TCONS_00071375-exon-scaffold_60-1491911889:871122..871209Clytia hemisphaericaexon
TCONS_00071375-exon-scaffold_60-1491911889:869075..870687TCONS_00071375-exon-scaffold_60-1491911889:869075..870687Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:869075..877570 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.74568	7.75066	4.11039	2.60475	4.95127	3.63414	7.74347	8.22586	6.58185	8.21009	6.74293	5.35751	7.68214	7.82601	8.31585	9.36829	7.55634	8.08359	6.46102	7.09751	6.12914	5.73921	8.40365	8.90155	11.8407	12.2804	4.94012	3.28005	6.24241	5.56697
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003123VPS9
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071375 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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