TCONS_00071399 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071399
Unique NameTCONS_00071399
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3296

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071399 ID=TCONS_00071399|Name=TCONS_00071399|organism=Clytia hemisphaerica|type=transcript|length=3296bp
TAAGATTATTATCATGCACTCCCTTATTATCAAATCAATCTTAGATTTAA
TTACACCGTTCAGTTTGATATACCATATTAAAAACCATTTGGGAATCGCG
TGACCTTTACATTTGGCAGATTTCGATAATGGTATATATTGGATTTGAAA
TACATACGATTGCATTCGATAAATGATCAATGCTCGTTGAAGACGTGTAA
TCGAAGTAAAGATTTTCATTGGGTGCTTGTATCAGAAGCACGAAGATGGG
AAAGCTGATCTTTGCCCTGCTACTATGCATGAATTTGATGGAAGTGTGGA
GTATCAGAGGTCGAATCACAAGTAACGAGCGATATTGCGTCCCTCAACCC
TACAAACCAGGCGGTGGAATCCGAAAAGTACAAGACATAAAGGCCCCACA
AGCTACTCTTAAAACTACAGGCTTTCTCGGTGTTATTGCAAAAGGTGCTA
AGAAGACAGGAGATGCGGCCAAAGTAGCGACAAAGGTTACAACAGAGTTC
GCGAAATTCGGTAAATTGTTTAAAACTGCATCCAAAATGGCACCATGGTT
AGGTGTCTTAAGTGGAGTTTTGGGATTTCTGGGACAAACGCCTTCTGTTG
GAGATGCTATAAAAGCTGTTAATAAAGCGTTTAAAGAATTTGCTGATGAA
ATCACCAAGAGaatgaatgaaatgaaaggataTGTGGATGatagtatttt
gaaaaaagaaagcgAATGGgtcgaaaaagaattgaagGTGTTGTTTAACG
GTTGGGCGGACTGTATTGTTTATTATCATGACGAAAGCGATGTGAATGAA
TGCCAAAGAAAAGCTTTTATGGATATCCGAAAAAATCGCGCCCATTTCAT
GCTGTTTAGTGGTAAAAACCCAACCCGTAAAGAACTCAAGAGATTGGAAT
TTCAATTTGTCTCTATCAGAGACTACTCTTTCTTAACCCTCCTCGTTCTA
CGTTCTTTAATCGATAGTTTTAAAGCCGAAAAAGGAAAAGAGAAGGATTA
TGAACGTCTCCTGAAACAAGGAATGGTCATTCCTGAGGAACTTGCTGACT
ATGCAAACTTTGTTAACAatgaaattcttgatttttatgATACGGGGACA
AAAAGCATTTGTAGGGGTACTTTTACGTGTGGTAAAATGGACACAAAATA
CAGAACTGTCTTTGGCTTCGGTCGTATAAAACCGTTACGGTACCCAGTTC
ACCGTCAAATGGAATGCAAATGTAAAATGATTCCAGATGCTGCAAACCAC
GAATGGTGCAAATACAAAATTGAACTTGATATCAACAACGCTCCACCAGG
AGAAGGTGAATATTGGAAAGACCATTCCAACTTGGAAAGGAGAGGTGAAA
AAGATCTTTTCGCATTATCAGACATTTACTGGAAGGAGACATCATCGGTG
GTTCGCAAGTATTGGTATGAAACAGTGATGGTTCAAGTTCCTAAATGGGA
GGAGTTTGCAGTTCAAGCTCAAAAAGAATACGAAGAATTCAGAGGTGGGA
ATCTTGCTTTGAAAAGACCAACTATTCAATCAAGTGGAGATCCCGAAAGA
TTACCAGCATCAGTCGATGGTTATACTAAGTATTGTCATTCACCATATGT
TGTTTCGACGACTGAAGCTGGTAGGAATCAATGGTGGAAAGTGATTTTGG
ATGGTGTCTATGAAATCAATACTGTTATTTTTTACAATCAAGTTGATACT
GATCACTCTGGGCAGTTATCAAATGTCGATATCTATGTTTATGATTTCGG
TGGGAAAAGAAGCCTTTGCGCTAATACTGGTGATATGAAAAATGTTTACA
TCAGACAATTCGAATGCAATGCTGGAGCTATTGGTAATGTTGTGATGCTC
TCCAAGATGGATGAAGGTAGCATTCGTTTATGTGAAGTGGTTGCATACGG
AGAAAAGGTGAAGAGAAATGGTCAAAATCTTGCATTAAATCGCCCGACAT
TACAGTCAACAACCACTGGACAACATTCCAGTTCTCATGCTGTTGAtggt
caaaaatcaaaatgttcactttctgaaaatacctgTTCAAAGACTGAAAT
TGCAATATCTGGCAAAAGAAGTTGGTGGGAAGTAGCTTTGGATCAACCAT
ACCATGTTGACAGAGTTATTATTCATGGATGTGGAAATTCTCTTTCTGAT
ATCATTATATTCGCTATTGATGAAGAGACCATTGAGACCGAAGAAGATTG
GCGTGAACGCCCACGAAGAGATATATACGAAGGGCGTAAAgggcaaaaag
tttcaatgtGTAAATACCTCGCAAATGTTGATGAAACAGCCTCTGTTCAC
AATATCAAATGCGATCAACCAGCCTATGGGAACATTCTACGGATTGCGAA
GAGAAATCGAAATGACGAATATTTGCAGTTGTGTGAAGTCGAAGTTTACG
GACATTTATTTAAAAGTGAAGAAGATTCTGACAATGTTGCTTATCACGGA
ATAACCAAACAATCAGGTGACCAATCGAGTCAAAGTGGCAGCCATCTTGC
TGTCAATGGTAACCACGTGAATTGCAGACTTACAGAACACACTCTTAGTA
TCACTGAGTCAAGTTCTGATAGTTGGTGGGAAGTTCAACTACATTCGTTA
TCTTTAATCAAAAGTGTTATCATTTATAACCGAGAAGATTGTTGTGGTGA
TCAATTATCAGATGCCACTATTTATGTTAACTTCATCTCCAATGATGCAA
TGCGTGCGTCAAACCCACCATTCAATCAGACTGGAAATATGGAGGGCGTA
AAAGCAAAAGAGTTTACTAACGAACGAAGATTTTTCGGTGAAGTTGTGAA
GATAGAGAAAAAGAAACACGATGCCCCGCTATCATTATGCGAAGTTGAAG
TTTACGGAAAAACAGtTACGGAACAAGAGAAGAATAAAATGGAACGAGCA
GAAGATTGTGAACGTTACAAACAAAAGGTTGCAAAGATGAAAGCTGAAGG
AAGAAGTAGAAAATCCATGAGAGGTGTATTATCACGCATGACCTTTTTCT
GCTCCGGTGCTTAACTAAACATACGCACGCACGCACACCCGGTCTATTTG
AGAATGAAGGAATTAGTTTACACCAggatttttggtattttcataTAACC
TATTTTTATATTTAACCTTGTATTTATGTACTAATTTGTTTTAAACAATT
CAATCGAATCCGAAAATTTATGTTATCCATTAAATTTCTGcaaatttata
ttttatgatTAAGATTGGCATAATTAAATCTATGACATCTCTTGTATGGT
CAGATTTATATGAAAAAACCAAGAAAGAGTAAAATGCAAGAAAGAG
Run BLAST on NCBI

protein sequence of TCONS_00071399-protein

>TCONS_00071399-protein ID=TCONS_00071399-protein|Name=TCONS_00071399-protein|organism=Clytia hemisphaerica|type=polypeptide|length=922bp
MGKLIFALLLCMNLMEVWSIRGRITSNERYCVPQPYKPGGGIRKVQDIKA
PQATLKTTGFLGVIAKGAKKTGDAAKVATKVTTEFAKFGKLFKTASKMAP
WLGVLSGVLGFLGQTPSVGDAIKAVNKAFKEFADEITKRMNEMKGYVDDS
ILKKESEWVEKELKVLFNGWADCIVYYHDESDVNECQRKAFMDIRKNRAH
FMLFSGKNPTRKELKRLEFQFVSIRDYSFLTLLVLRSLIDSFKAEKGKEK
DYERLLKQGMVIPEELADYANFVNNEILDFYDTGTKSICRGTFTCGKMDT
KYRTVFGFGRIKPLRYPVHRQMECKCKMIPDAANHEWCKYKIELDINNAP
PGEGEYWKDHSNLERRGEKDLFALSDIYWKETSSVVRKYWYETVMVQVPK
WEEFAVQAQKEYEEFRGGNLALKRPTIQSSGDPERLPASVDGYTKYCHSP
YVVSTTEAGRNQWWKVILDGVYEINTVIFYNQVDTDHSGQLSNVDIYVYD
FGGKRSLCANTGDMKNVYIRQFECNAGAIGNVVMLSKMDEGSIRLCEVVA
YGEKVKRNGQNLALNRPTLQSTTTGQHSSSHAVDGQKSKCSLSENTCSKT
EIAISGKRSWWEVALDQPYHVDRVIIHGCGNSLSDIIIFAIDEETIETEE
DWRERPRRDIYEGRKGQKVSMCKYLANVDETASVHNIKCDQPAYGNILRI
AKRNRNDEYLQLCEVEVYGHLFKSEEDSDNVAYHGITKQSGDQSSQSGSH
LAVNGNHVNCRLTEHTLSITESSSDSWWEVQLHSLSLIKSVIIYNREDCC
GDQLSDATIYVNFISNDAMRASNPPFNQTGNMEGVKAKEFTNERRFFGEV
VKIEKKKHDAPLSLCEVEVYGKTVTEQEKNKMERAEDCERYKQKVAKMKA
EGRSRKSMRGVLSRMTFFCSGA
Run BLAST on NCBI

transcript from alignment at scaffold_60:1184775..1192249-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071399 ID=TCONS_00071399|Name=TCONS_00071399|organism=Clytia hemisphaerica|type=transcript|length=7475bp|location=Sequence derived from alignment at scaffold_60:1184775..1192249- (Clytia hemisphaerica)
TAAGATTATTATCATGCACTCCCTTATTATCAAATCAATCTTAGATTTAA
TTACACCGTTCAGTTTGATATACCATATTAAAAACCATTTGGGAATCGCG
TGACCTTTACATTTGGCAGATTTCGATAATGGTATATATTGGATTTGAAA
TACATACGATTGCATTCGATAAATGATCAATGCTCGTTGAAGACGTGTAA
TCGAAGTAAAGATTTTCATTGGGTGCTTGTATCAGAAGGTATTCCCTTTT
TGTTCATTTAAAAGGAGAAAATGATCCAAATCGTTTTTGAATAGTTTTGG
TCCTTATACCGGGTGTCCCAGAAAAAAAAGCCCCCCTCTTTGAAAATAGA
AAGGACAAATTTCAATTATGAGGGGTCGTTTGTCAAATTTGGTCAACTAG
ATCAAAAGTTATCGTCTAAAACTAAATTATTGCTTTTCAAAAAAGTCGAA
AAAAGGCGAAAACGAGGGTATTTAATGTAATAAAATAAATTTTTGGGACA
CACTGTAGATATTTTCAAAGAATTTATTTCGAAATATTTTTCAAAAGAAA
AGATTATTTGGAGAAAATATTATTTGGTGGGGAGAGGTCTTACAGAAACG
TGAGAGAGGCTCTTCTTTTCATTGACTAAGCATCAATCCAGAGCTAAAAT
CTACGGTGGCCGACAAGGGCAAAAATCTTACTTTCTTTTTTCTGGGGGAA
TCTTTCTTTTTTTGGGGGGAACCTTTCTTTTTTGTGGGGAATCTTTGTTT
TTTGGTGGGAGTCTTTCTTTTTGGGGGGGGGGGGGGTTTTTTTTTTTGGG
GAATCTTTAACTTTAAGACATGTTTGAGGGAATCTTTCTTTTTGGGGGGG
GGGATCTTTGTTTTTTGGGGAATCTTTAACTTTAAGACATGTTTGAGGGA
ATCTTTCTTTTTGGGGGGGGGGATCTTTGTTTTTTGGGGAATCTTTAACT
TTAAGACATGTTTGAGGGAATCTTTCTTTTTGGGGGGGGGGATCTTTGTT
TTTTGGGGAATTTTTTTTTTTGGGGGGAATCTTTAATTTTGTTCGAATCT
TTAACTTTGGAGGAATCTTTTTTTTTGCAGCGGGGGAATGTTTTTTTGAG
TCATGACTTTAAGATTTTCCTTCATTCGGTACCGTAATAATTGAGTCTAT
CAAAATGGTAACAATAAGTTAATAAGATATTTTGATGAATAACGAGATTG
CTCACGGGAATTATTTGACCCGCATTCCGCGCGATCGTTTTTAATCGCCC
GCGCGTGTACGCTCTGTCTGCTGTATATGGGTACTGTATGCAAGAACAAG
AAAACCCGTGGGGCGGCGTGAAGGCCCAGCAACTTAAAATTATGAATATG
TAGGCAGAAGAAGAGGCCAGCCTTGATGAGGTTGAATACTAAAATCACCG
AGGAAGTTAGACTGTTATAGAATTAATGGTGTTGAAATTAACAAAATTGG
TCATGGCATGCTAATTAATTTTTCGAAAATTTTCCACCCAGGACATTTTT
ATTCGAACCCCCCCCCCGCTTATTAAGTTTTGAGATTTTTTCCAACCCCC
CCCTTATTCCAATCCCCCCGGCTATTAGGTACCCGAGAGTACCTAATCAA
AAGGAGGTTACGGGTATGTGTCGCTTTTAAGAATGCTTTTTTGGATCTTG
AGAACCCCACTAAAGGTCGTAAAAATGACAACATGTAGTTCCAGTCTCTC
CAAAGATTCAAAAAGAGCTTAAAAATCCAATTCCTTGGCATTCAAAATCC
AATAAGAATAACAAAATTAGTGAAAATTCGGGTTTATTTTCTAGATTTCT
GTCCTTTGAAGAATTTCAGATTTCACAAGACTCTGCTAATAGGAAATTCG
GGTGTGCGCAAAGCCTATTACCTCCCCGGGCAAGAAAAAAAGAATCCCCC
CCCAAAAAAAGATTCCCCCAATATTAAAGATTCTTCACAAAAAAAGAAAC
ATTCCCTCAAAGTTAAAGATTCCCCCAAAAAGAAAGATTCCCCAAAAAAA
CAAAGATTCTCCCAAAAAAAGAAAGATTCCCCCAAAAAAACAAAGATTCC
CCGAAAAAAAGAAAGATTCCCCCAAAAAAACAAAGATTCCCCCAAAAAAA
CAAAGATTCCCCCAAAAAAAGAAAGTAAGATTTTTGCCCTTGTCGGCCAC
CGTAGGTTTGAGACTGTGGACCTTAATGAAACATGAACCCTACCAAGAAG
TCAACAAAAAATGTGGTCTAGAGGATATACTTAGTATCAACCTACTTTTT
AGGGTCGTAACAATATATTCTTTTGTTTAAAGAAGGAATTTTTAACTGTC
ATACTTAAAAATATTTTACAGCCTTGCATTGAAACAAAAAGTTCTATAAG
AATAAATAGTCCCAGAATCGCAAATATTTTTAGGAAAGAAAGTTAAATAT
CATATACTTTCGAATTATAGCACGAAGATGGGAAAGCTGATCTTTGCCCT
GCTACTATGCATGAATTTGATGGAAGTGTGGAGTATCAGAGGTCGAATCA
CAAGTAACGAGCGATATTGCGTCCCTCAACCCTACAAACCAGGCGGTGGA
ATCCGAAAAGTACAAGACATAAAGGCCCCACAAGCTACTCTTAAAACTAC
AGGCTTTCTCGGTGTTATTGCAAAAGGTGCTAAGAAGACAGGAGATGCGG
CCAAAGTAGCGACAAAGGTTACAACAGAGTTCGCGAAATTCGGTAAATTG
TTTAAAACTGCATCCAAAATGGCACCATGGTTAGGTGTCTTAAGTGGAGT
TTTGGGATTTCTGGGACAAACGCCTTCTGTTGGAGATGCTATAAAAGCTG
TTAATAAAGCGTTTAAAGAATTTGCTGATGAAATCACCAAGAGAATGAAT
GAAATGAAAGGATATGTGGATGATAGTATTTTGAAAAAAGAAAGCGAATG
GGTCGAAAAAGAATTGAAGGTGTTGTTTAACGGTTGGGCGGACTGTATTG
TTTATTATCATGACGAAAGCGATGTGAATGAATGCCAAAGAAAAGCTTTT
ATGGATATCCGAAAAAATCGCGCCCATTTCATGCTGTTTAGTGGTAAAAA
CCCAACCCGTAAAGAACTCAAGAGATTGGAATTTCAATTTGTCTCTATCA
GAGACTACTCTTTCTTAACCCTCCTCGTTCTACGTTCTTTAATCGATAGT
TTTAAAGCCGAAAAAGGAAAAGAGAAGGATTATGAACGTCTCCTGAAACA
AGGAATGGTCATTCCTGAGGAACTTGCTGACTATGCAAACTTTGTTAACA
ATGAAATTCTTGATTTTTATGATACGGGGACAAAAAGCATTTGTAGGGGT
ACTTTTACGTGTGGTAAAATGGACACAAAATACAGAACTGTCTTTGGCTT
CGGTCGTATAAAACCGTTACGGTACCCAGTTCACCGTCAAATGGAATGCA
AATGTAAAATGATTCCAGATGCTGCAAACCACGAATGGTGCAAATACAAA
ATTGAACTTGATATCAACAACGCTCCACCAGGAGAAGGTGAATATTGGAA
AGACCATTCCAACTTGGAAAGGAGAGGTGAAAAAGATCTTTTCGCATTAT
CAGACATTTACTGGAAGGAGACATCATCGGTGGTTCGCAAGTATTGGTAT
GAAACAGTGATGGTTCAAGTTCCTAAATGGGAGGAGTTTGCAGTTCAAGC
TCAAAAAGAATACGAAGAATTCAGAGGTATAATAATATATTTTCACAAAT
AGATAGAGTCGGGACCATATATATAAAGCCCGAAGGGCTAAATTTCGTGC
TTTTAGCCATCGCAGACAAAAACAAGTGAATATCAGAAATAATATTGCTG
CTATTGTTTTCGAACACCCGCGAAGCTTCTGATTGGTCAAGCGCTGAAAT
TCTTTTGTGGGAAGGGTAGACTGATAGATAGTATATATTTTACGATGTAG
TATCGATCTGCGACTTTTTGAGTAGTCTTTCGATTAGGAATCCACATCAA
CCAAGCTTGGCTGTCTATGAAAAAATTAAAAACGGTAGATACTGAGTCAG
GATTCTTTAGTTTGCAGGCCTGATGTCTTAGACCTCTTGGTCAACCCCCC
CCCCTTTTTTCTAAAAAAAAAACATCATTTTTTCAGGTGGGAATCTTGCT
TTGAAAAGACCAACTATTCAATCAAGTGGAGATCCCGAAAGATTACCAGC
ATCAGTCGATGGTTATACTAAGTATTGTCATTCACCATATGTTGTTTCGA
CGACTGAAGCTGGTAGGAATCAATGGTGGAAAGTGATTTTGGATGGTGTC
TATGAAATCAATACTGTTATTTTTTACAATCAAGTTGATACTGATCACTC
TGGGCAGTTATCAAATGTCGATATCTATGTTTATGATTTCGGTGGGAAAA
GAAGCCTTTGCGCTAATACTGGTGATATGAAAAATGTTTACATCAGACAA
TTCGAATGCAATGCTGGAGCTATTGGTAATGTTGTGATGCTCTCCAAGAT
GGATGAAGGTAGCATTCGTTTATGTGAAGTGGTTGCATACGGAGAAAAGG
GTAAGTTTGATCATATGAAAGCTAATTGAGAATATTGATTTGTATTTTCG
CAAAAAAAATTTGTTGAATCATTTTAAGTACTTTTCACTACTTTGATATA
TTTTTTGACTAATAAAAAACAAGGTTTTAGATTATATTGAGGCCTTATTT
TTACGGATTTGTCTGATAAATGAAAATTAATTGAAAAGCCAGTAATTTAC
TGTAATGGAGAAAACGCCAAGAAATTGGGATTATTAGAAGAATTGGAGTA
CGGTACCAAAATGGCGAAAACTCAGTTGCCGTGAATTTCAACTTTGTGCA
CTAATTATACAATAACTTATCGGGAAAAAATGTCGAGAGAAAGTGACAAA
AATTTTGAGGGGGTGACGAAATTTTTCCCCGACGAATTTTTCCCGCCCAA
CTAATTAAAACACCGACATCTTTTCCCCGATAAGAATATACGACTTATAA
ATAAATCGAACATAAATCATAGCAGTAGAGATTATAATTAAAAGTTTTAA
CGGCAAAGAAAACACTTCAGCTCAACCAAAATACTAAGCTAAAATTTACT
GAACTTTATTTCTACATTTTAGTGAAGAGAAATGGTCAAAATCTTGCATT
AAATCGCCCGACATTACAGTCAACAACCACTGGACAACATTCCAGTTCTC
ATGCTGTTGATGGTCAAAAATCAAAATGTTCACTTTCTGAAAATACCTGT
TCAAAGACTGAAATTGCAATATCTGGCAAAAGAAGTTGGTGGGAAGTAGC
TTTGGATCAACCATACCATGTTGACAGAGTTATTATTCATGGATGTGGAA
ATTCTCTTTCTGATATCATTATATTCGCTATTGATGAAGAGACCATTGAG
ACCGAAGAAGATTGGCGTGAACGCCCACGAAGAGATATATACGAAGGGCG
TAAAGGGCAAAAAGTTTCAATGTGTAAATACCTCGCAAATGTTGATGAAA
CAGCCTCTGTTCACAATATCAAATGCGATCAACCAGCCTATGGGAACATT
CTACGGATTGCGAAGAGAAATCGAAATGACGAATATTTGCAGTTGTGTGA
AGTCGAAGTTTACGGACATTTATGTAAGATCATTTTTCTTCCTTTTTCTG
TTCCTCTTTCCAACGACATTACAAACTCCCTTATCGTACTAAAAGTTATC
AGGTTATTTTTTTGGAAAGTGAATAACATATTCCAATAAATTTTACTTCT
TTTTTTACACCAACTGGCTAACTGGCTTATTGTACGAATAGTGGGTCCTA
GGACCTTTTTTAGTACTGATAGATAGATAAATAAAAAACATATCAGTGGA
TTACTGATACAAAGCATTTTTAGCTTAGATATTTAAGGGTTTTTTGAAAG
GATTTTTTAAACTATTATTTTATTCTGATATTGAATTTTCTTACCATAGT
TAAAAGTGAAGAAGATTCTGACAATGTTGCTTATCACGGAATAACCAAAC
AATCAGGTGACCAATCGAGTCAAAGTGGCAGCCATCTTGCTGTCAATGGT
AACCACGTGAATTGCAGACTTACAGAACACACTCTTAGTATCACTGAGTC
AAGTTCTGATAGTTGGTGGGAAGTTCAACTACATTCGTTATCTTTAATCA
AAAGTGTTATCATTTATAACCGAGAAGATTGTTGTGGTGATCAATTATCA
GATGCCACTATTTATGTTAACTTCATCTCCAATGATGCAATGCGTGCGTC
AAACCCACCATTCAATCAGACTGGAAATATGGAGGGCGTAAAAGCAAAAG
AGTTTACTAACGAACGAAGATTTTTCGGTGAAGTTGTGAAGATAGAGAAA
AAGAAACACGATGCCCCGCTATCATTATGCGAAGTTGAAGTTTACGGAAA
AACAGGTTAGTTTTCAGTTCTTCCAGTTCATCAGAGAGAAATTAGAATAC
ACCTTTTCGACCGTAGCCGCCTATTACCGCGCGGGCATTTTTTGTCCGCT
TTATCCCACTAAAACCGTCCCAGTCCTTTTTTCGCACCTATAGACAAAAG
AAAAATGTTTCCAAAAAGGATTAGATCGAGTTTAGGGCGATTACGGTCGA
AAAGGTGTTTTGACTCTATCAACAAACTGAGTGCTACCTACCATCAAATC
AAGCTTTCATGTCTGAGCACTTTCTTAAAAATATTTGGAATTTGTTAACT
GAGTGAGGTTCGGTATAAGATATAGTCAGAGGGCTTGGTTTTAACTCTTT
TTTGTTATACTGTTGGTGAGAGAGTCAGATAGCACCTACATCCCCTTCGC
TTAACATTATGAAGTGACAAAATTATAAATTTTGTTCAATTTTTTGTTCA
TTTTTTGTTTTCTTTCCTTTCTGAAACATCCTCTTTTGATGTGATGTGAA
AATTTTCAAAAAATCATTACGCACGCAAAATACTCAAGATTTCTAAGCTA
ATCAAAATTCCTGGTGAGCAAATCATTTGAAGCTTTTGAGGCAATTCATC
GTTCTTTATTTCTATCACCCTCTCTATTTGTTGTGAATTTGGTTCTCCCC
TTTGAGTTTCCATGATCATGCGAGTACTTATTTTTGTTTTCTAGTTACGG
AACAAGAGAAGAATAAAATGGAACGAGCAGAAGATTGTGAACGTTACAAA
CAAAAGGTTGCAAAGATGAAAGCTGAAGGAAGAAGTAGAAAATCCATGAG
AGGTGTATTATCACGCATGACCTTTTTCTGCTCCGGTGCTTAACTAAACA
TACGCACGCACGCACACCCGGTCTATTTGAGAATGAAGGAATTAGTTTAC
ACCAGGATTTTTGGTATTTTCATATAACCTATTTTTATATTTAACCTTGT
ATTTATGTACTAATTTGTTTTAAACAATTCAATCGAATCCGAAAATTTAT
GTTATCCATTAAATTTCTGCAAATTTATATTTTATGATTAAGATTGGCAT
AATTAAATCTATGACATCTCTTGTATGGTCAGATTTATATGAAAAAACCA
AGAAAGAGTAAAATGCAAGAAAGAG

Coding sequence (CDS) from alignment at scaffold_60:1184775..1192249-

>TCONS_00071399 ID=TCONS_00071399|Name=TCONS_00071399|organism=Clytia hemisphaerica|type=CDS|length=2769bp|location=Sequence derived from alignment at scaffold_60:1184775..1192249- (Clytia hemisphaerica)
ATGGGAAAGCTGATCTTTGCCCTGCTACTATGCATGAATTTGATGGAAGT
GTGGAGTATCAGAGGTCGAATCACAAGTAACGAGCGATATTGCGTCCCTC
AACCCTACAAACCAGGCGGTGGAATCCGAAAAGTACAAGACATAAAGGCC
CCACAAGCTACTCTTAAAACTACAGGCTTTCTCGGTGTTATTGCAAAAGG
TGCTAAGAAGACAGGAGATGCGGCCAAAGTAGCGACAAAGGTTACAACAG
AGTTCGCGAAATTCGGTAAATTGTTTAAAACTGCATCCAAAATGGCACCA
TGGTTAGGTGTCTTAAGTGGAGTTTTGGGATTTCTGGGACAAACGCCTTC
TGTTGGAGATGCTATAAAAGCTGTTAATAAAGCGTTTAAAGAATTTGCTG
ATGAAATCACCAAGAGAATGAATGAAATGAAAGGATATGTGGATGATAGT
ATTTTGAAAAAAGAAAGCGAATGGGTCGAAAAAGAATTGAAGGTGTTGTT
TAACGGTTGGGCGGACTGTATTGTTTATTATCATGACGAAAGCGATGTGA
ATGAATGCCAAAGAAAAGCTTTTATGGATATCCGAAAAAATCGCGCCCAT
TTCATGCTGTTTAGTGGTAAAAACCCAACCCGTAAAGAACTCAAGAGATT
GGAATTTCAATTTGTCTCTATCAGAGACTACTCTTTCTTAACCCTCCTCG
TTCTACGTTCTTTAATCGATAGTTTTAAAGCCGAAAAAGGAAAAGAGAAG
GATTATGAACGTCTCCTGAAACAAGGAATGGTCATTCCTGAGGAACTTGC
TGACTATGCAAACTTTGTTAACAATGAAATTCTTGATTTTTATGATACGG
GGACAAAAAGCATTTGTAGGGGTACTTTTACGTGTGGTAAAATGGACACA
AAATACAGAACTGTCTTTGGCTTCGGTCGTATAAAACCGTTACGGTACCC
AGTTCACCGTCAAATGGAATGCAAATGTAAAATGATTCCAGATGCTGCAA
ACCACGAATGGTGCAAATACAAAATTGAACTTGATATCAACAACGCTCCA
CCAGGAGAAGGTGAATATTGGAAAGACCATTCCAACTTGGAAAGGAGAGG
TGAAAAAGATCTTTTCGCATTATCAGACATTTACTGGAAGGAGACATCAT
CGGTGGTTCGCAAGTATTGGTATGAAACAGTGATGGTTCAAGTTCCTAAA
TGGGAGGAGTTTGCAGTTCAAGCTCAAAAAGAATACGAAGAATTCAGAGG
TGGGAATCTTGCTTTGAAAAGACCAACTATTCAATCAAGTGGAGATCCCG
AAAGATTACCAGCATCAGTCGATGGTTATACTAAGTATTGTCATTCACCA
TATGTTGTTTCGACGACTGAAGCTGGTAGGAATCAATGGTGGAAAGTGAT
TTTGGATGGTGTCTATGAAATCAATACTGTTATTTTTTACAATCAAGTTG
ATACTGATCACTCTGGGCAGTTATCAAATGTCGATATCTATGTTTATGAT
TTCGGTGGGAAAAGAAGCCTTTGCGCTAATACTGGTGATATGAAAAATGT
TTACATCAGACAATTCGAATGCAATGCTGGAGCTATTGGTAATGTTGTGA
TGCTCTCCAAGATGGATGAAGGTAGCATTCGTTTATGTGAAGTGGTTGCA
TACGGAGAAAAGGTGAAGAGAAATGGTCAAAATCTTGCATTAAATCGCCC
GACATTACAGTCAACAACCACTGGACAACATTCCAGTTCTCATGCTGTTG
ATGGTCAAAAATCAAAATGTTCACTTTCTGAAAATACCTGTTCAAAGACT
GAAATTGCAATATCTGGCAAAAGAAGTTGGTGGGAAGTAGCTTTGGATCA
ACCATACCATGTTGACAGAGTTATTATTCATGGATGTGGAAATTCTCTTT
CTGATATCATTATATTCGCTATTGATGAAGAGACCATTGAGACCGAAGAA
GATTGGCGTGAACGCCCACGAAGAGATATATACGAAGGGCGTAAAGGGCA
AAAAGTTTCAATGTGTAAATACCTCGCAAATGTTGATGAAACAGCCTCTG
TTCACAATATCAAATGCGATCAACCAGCCTATGGGAACATTCTACGGATT
GCGAAGAGAAATCGAAATGACGAATATTTGCAGTTGTGTGAAGTCGAAGT
TTACGGACATTTATTTAAAAGTGAAGAAGATTCTGACAATGTTGCTTATC
ACGGAATAACCAAACAATCAGGTGACCAATCGAGTCAAAGTGGCAGCCAT
CTTGCTGTCAATGGTAACCACGTGAATTGCAGACTTACAGAACACACTCT
TAGTATCACTGAGTCAAGTTCTGATAGTTGGTGGGAAGTTCAACTACATT
CGTTATCTTTAATCAAAAGTGTTATCATTTATAACCGAGAAGATTGTTGT
GGTGATCAATTATCAGATGCCACTATTTATGTTAACTTCATCTCCAATGA
TGCAATGCGTGCGTCAAACCCACCATTCAATCAGACTGGAAATATGGAGG
GCGTAAAAGCAAAAGAGTTTACTAACGAACGAAGATTTTTCGGTGAAGTT
GTGAAGATAGAGAAAAAGAAACACGATGCCCCGCTATCATTATGCGAAGT
TGAAGTTTACGGAAAAACAGTTACGGAACAAGAGAAGAATAAAATGGAAC
GAGCAGAAGATTGTGAACGTTACAAACAAAAGGTTGCAAAGATGAAAGCT
GAAGGAAGAAGTAGAAAATCCATGAGAGGTGTATTATCACGCATGACCTT
TTTCTGCTCCGGTGCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044363XLOC_044363Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071399-exon-scaffold_60-1575043694:1192012..1192249TCONS_00071399-exon-scaffold_60-1575043694:1192012..1192249Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1575043694:1188574..1189829TCONS_00071399-exon-scaffold_60-1575043694:1188574..1189829Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1575043694:1187750..1188163TCONS_00071399-exon-scaffold_60-1575043694:1187750..1188163Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1575043694:1186677..1187177TCONS_00071399-exon-scaffold_60-1575043694:1186677..1187177Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1575043694:1185895..1186350TCONS_00071399-exon-scaffold_60-1575043694:1185895..1186350Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1575043694:1184775..1185205TCONS_00071399-exon-scaffold_60-1575043694:1184775..1185205Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1510915933:1192012..1192249TCONS_00071399-exon-scaffold_60-1510915933:1192012..1192249Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1510915933:1188574..1189829TCONS_00071399-exon-scaffold_60-1510915933:1188574..1189829Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1510915933:1187750..1188163TCONS_00071399-exon-scaffold_60-1510915933:1187750..1188163Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1510915933:1186677..1187177TCONS_00071399-exon-scaffold_60-1510915933:1186677..1187177Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1510915933:1185895..1186350TCONS_00071399-exon-scaffold_60-1510915933:1185895..1186350Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1510915933:1184775..1185205TCONS_00071399-exon-scaffold_60-1510915933:1184775..1185205Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1491911889:1192012..1192249TCONS_00071399-exon-scaffold_60-1491911889:1192012..1192249Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1491911889:1188574..1189829TCONS_00071399-exon-scaffold_60-1491911889:1188574..1189829Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1491911889:1187750..1188163TCONS_00071399-exon-scaffold_60-1491911889:1187750..1188163Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1491911889:1186677..1187177TCONS_00071399-exon-scaffold_60-1491911889:1186677..1187177Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1491911889:1185895..1186350TCONS_00071399-exon-scaffold_60-1491911889:1185895..1186350Clytia hemisphaericaexon
TCONS_00071399-exon-scaffold_60-1491911889:1184775..1185205TCONS_00071399-exon-scaffold_60-1491911889:1184775..1185205Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071399-proteinTCONS_00071399-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1184775..1192249 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
120.041	123.088	87.5354	75.7224	463.156	303.826	330.515	388.451	294.993	363.154	106.818	175.277	0.252232	0.0714396	0.0130518	0.049023	18.8597	12.327	0.818534	0.0383524	0.755597	0.634129	21.4262	16.3407	0.0493565	0.0550619	1.19766	1.29499	7.61528	11.0078
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006585FTP1
IPR008979Galactose-bd-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071399 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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