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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071568 ID=TCONS_00071568|Name=TCONS_00071568|organism=Clytia hemisphaerica|type=transcript|length=1276bp
aataatatcaaaaatttgccctgatctaaggggtgccctacgaagtgaca
caattcactacctcggccgctggtctaaaTGAACAAGATAACATTAACCA
ATTGAGAGTAAGTAATTTCTTTCCTTAAATTGACATGGCGAGTGAACACC
ATGACACCAGGACTCCAAAAGGCagcaaaaaacaaataaacgCTCAACAA
AGGAGACAACTTGAACAAATGGTGAGTGAACAACAGGACACCATAAATGA
TTTTGTCTTAAGATTTTACTTTCTTGTCTATGGTGGTCGAGGCGAGCCAA
TTTAACAGCAAACAAGTGTTTTTATTAGCCCAAACACATGCaaagtgaaa
gagtttttaCCGATGTAACCGATTTCCTTGTCTTGACTTAGACAATTTTA
TTCCGacgaaaaattaaattttcgctATCTGAAAAGCTACACAttattta
aaataaacaaaactcatttcaaaaatttggtttagtccaaaaattaaaat
gctaATAAGTATGCATCCTTTTTCCCTCGTAACATGACTATGGGTTGCTT
CAATCGTGGAATTAGTGGAATAATTTGTGATAAAAGTTTTGTTAAACGGA
CTTTTCCCGTCCCGGTCGACTTCCCTTCCACATCAAATgtaagtttttct
ttaaattaattaaaatgctgataaaaatgCATCCTTTTTCCCTCGTAAGT
TGTCTATGGGTTGCTTTAATctcaaagaattggaaaaataataatGAGTG
GAATAATTTgtgataaaagtttttttgttaaacTGACTTAAAATCTTTAA
TCTCAGATCACTTCACGGAGCTACTGGGTCTAGAACTTACTTTGTGAAGC
TaaaaggccaaaaaatatgCTTCCGTCAAATGTGCATTTTCTGATATTAT
ATTCCATCTTTTTCTTCTCTTCAAAGTGTTATCTTAAAAATCGAGTTGAA
AATGGCTTCGAACTATCCTTACGATCCAGAAGAAATCCAGAAATCCAGAA
GAAATTGAAACTATCAATCAATTACGAGTAAGTAATGATCACGTCACGGA
GCTACTGGGTCTAGAACTTACTTTGTGAAGCTaaaaggccaaaaaatatg
CTCCCGTCAAAATGTGCATTTTCTGATATTatatttcatctttttcttct
cttctAAGTGTTATCTTAAAAATCGAGTTGAAAATGGCTTCGAACTATCC
TTACGATCCAGAAGAAATCCAGAAATCCAGAAGAAATTGAAACTATCAAT
CAATTACGAGTAAGTAATGATCACGT Run BLAST on NCBI transcript from alignment at scaffold_61:28405..29680 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071568 ID=TCONS_00071568|Name=TCONS_00071568|organism=Clytia hemisphaerica|type=transcript|length=1276bp|location=Sequence derived from alignment at scaffold_61:28405..29680 (Clytia hemisphaerica)
ACGTGATCATTACTTACTCGTAATTGATTGATAGTTTCAATTTCTTCTGG
ATTTCTGGATTTCTTCTGGATCGTAAGGATAGTTCGAAGCCATTTTCAAC
TCGATTTTTAAGATAACACTTagaagagaagaaaaagatgaaatatAATA
TCAGAAAATGCACATTTTGACGGGAGcatattttttggccttttAGCTTC
ACAAAGTAAGTTCTAGACCCAGTAGCTCCGTGACGTGATCATTACTTACT
CGTAATTGATTGATAGTTTCAATTTCTTCTGGATTTCTGGATTTCTTCTG
GATCGTAAGGATAGTTCGAAGCCATTTTCAACTCGATTTTTAAGATAACA
CTTTGAAGAGAAGAAAAAGATGGAATATAATATCAGAAAATGCACATTTG
ACGGAAGcatattttttggccttttAGCTTCACAAAGTAAGTTCTAGACC
CAGTAGCTCCGTGAAGTGATCTGAGATTAAAGATTTTAAGTCAgtttaac
aaaaaaacttttatcacAAATTATTCCACTCattattatttttccaattc
tttgagATTAAAGCAACCCATAGACAACTTACGAGGGAAAAAGGATGcat
ttttatcagcattttaattaatttaaagaaaaacttacATTTGATGTGGA
AGGGAAGTCGACCGGGACGGGAAAAGTCCGTTTAACAAAACTTTTATCAC
AAATTATTCCACTAATTCCACGATTGAAGCAACCCATAGTCATGTTACGA
GGGAAAAAGGATGCATACTTATtagcattttaatttttggactaaaccaa
atttttgaaatgagttttgtttattttaaataaTGTGTAGCTTTTCAGAT
agcgaaaatttaatttttcgtCGGAATAAAATTGTCTAAGTCAAGACAAG
GAAATCGGTTACATCGGtaaaaactctttcactttGCATGTGTTTGGGCT
AATAAAAACACTTGTTTGCTGTTAAATTGGCTCGCCTCGACCACCATAGA
CAAGAAAGTAAAATCTTAAGACAAAATCATTTATGGTGTCCTGTTGTTCA
CTCACCATTTGTTCAAGTTGTCTCCTTTGTTGAGcgtttatttgtttttt
gctGCCTTTTGGAGTCCTGGTGTCATGGTGTTCACTCGCCATGTCAATTT
AAGGAAAGAAATTACTTACTCTCAATTGGTTAATGTTATCTTGTTCAttt
agaccagcggccgaggtagtgaattgtgtcacttcgtagggcacccctta
gatcagggcaaatttttgatattatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071568-exon-scaffold_61-1491911889:28405..29680 | TCONS_00071568-exon-scaffold_61-1491911889:28405..29680 | Clytia hemisphaerica | exon |
| TCONS_00071568-exon-scaffold_61-1510915933:28405..29680 | TCONS_00071568-exon-scaffold_61-1510915933:28405..29680 | Clytia hemisphaerica | exon |
| TCONS_00071568-exon-scaffold_61-1575043694:28405..29680 | TCONS_00071568-exon-scaffold_61-1575043694:28405..29680 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_61 | supercontig | scaffold_61:28405..29680 . |
Blast
The following BLAST results are available for this feature:
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