TCONS_00071591 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071591
Unique NameTCONS_00071591
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3112

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071591 ID=TCONS_00071591|Name=TCONS_00071591|organism=Clytia hemisphaerica|type=transcript|length=3112bp
aaattatgcAGTAATAATATCAAACAAGGAAAATATTATCAAGTATGGAG
TTTCCTAAAAAACGAAATGGTTCAAAGATCAAATCAAAATGGATTGGttt
aaggaaaagaaaaacaaaaattgcagGACCACCTAAAATTACtaacttta
aaatttcaaatgttcCAGTTACTAATGATGATAATGGTTACGACTGTGAT
gtggaaaattttgatgaacATGATGTTGGAACTTATGATGAAGACTTTGT
ACCTAAAAAACAATGTTATGGTATTAACAAGGAGAAAGAATTAATTTGTT
GGGACAAACATAACATTGATTATTGCTTGATTTATGCAATGAAATTTAAC
ACTTTCCCGAGCCATTGCTGCTTTTGTAACGATGAAGTTATCACATCTTT
TGTATGGTGTAAATCATGCGGACCATTGTCCTTTTATTGTCATGATTGCG
CttataaaattcacaaaaacacACTCTTTCATTCATTGGTTGAAGTCCag
GTTGATGGATGCAATGTCAAACCATTCAAAGTAAAATCTGTTCTGCAAAC
TGATCATGTAAAAGCATGTACTTCTTCTTATTCAAGAACATTGACTGTGA
TTTCAGAAACAGGATCAACTCATCaatgtcaaatttatttttgtaaatgc
acAGAAGAGTTCAATACTTTGGTACATCTGGATCTATGGGCAGTAACACC
GATAAAGCCAAATACAgttatttcaatgaatttgttACACCTTTTTGTTG
CATTACAGTTGGAAGGGAAAATATCTTTTTCGTCTTTTTGTGATGGTTTC
TCTTGGAAAAGCGGAGTGGTTGATCATGACCTGAAGAGATACCTGAACCG
CATGACCCAAACGGATTCATTAGATCAATTCAGACATTTCCGTCGACAAT
TAACAAGTCTGAAGACAATATGCCCGAACTATGATGGTTTGGAAAAGTGT
GCATCTTGCCCCAAGGAGAATGGAAGTATTTTCTACTGCTTTGACGCCAA
CTTTGGACTTGTGTTAAAAAGCTCTGCTTCTAAATCAAAGAGACTCGCTA
TGCGGTCGGAAAATCTATTTATCCTTGATGAGGAAGTAAAAACCTTTATG
GAAAGCTACGATGATACTTTGAAGACAAAGGATTGCAGCAATTTCCAAGC
TGGCAACAATTTACGGTCAAAACGAAAAACGAAGAAACTCAGTGTAACTG
GAGTATTTGgtatgtcTTGTCGTCATGAGTTCCCGAAGCTTTTCTTGAAT
ATGCAACACGGTGAAAGATTGGGCTACGCCGTTCTTCTCCTTGATCAGAT
ACTGAACGATACAGAAAAAAAGAGGTTGGATGTGCACATCATATATGATA
TTGCATGCGTTTTGAAGTCACATTTGCAGAAAAAGAATACTTTTACCAAG
TAtcaagatttcaaatttggcatcCCTGTTTTTCATTCGTATGGTCACAG
AGGAGACTGTCAGgTGAAAAATTCAATCAGAAGATTAGATTCTTTTGGCC
TTATGGATGGTGAATTGATGGAACGCCTCTGGTCATATCTTCGATCATTC
TCAAAGATTACCAAGGAGATGACTCCAGCTCACCGCACGGATTTACTTAG
TGATGCTCTGCTGCATTTTGGCTCAAAGAAAATGGGAAATATCGgaAAAT
ATCTCGTGTTTCTATTTCAAAAAGCAACAAGAACTTTGAATTCTTGCGAT
TCAGAAATTAAAACGATTTGCTCTAAACTGCCTGCTCATGTGGATGAAGA
AATTATCAAATCATGGAAAAAAGAGGAGGATAACGCCGTAAGCCAAAATG
GAAAACTTATACAGAAAAAAAAACTGACCCATTTGATTGACATGACAATT
GACATGACAAACGACAAATGTCTCTCCTTCTGATTGGAAGCAAGTCTACT
ACCTTAAACTGAAAGACTTTTACAAAGAATCTGCACTGGTTTTAATGAGC
GAAAAAGTATGCGATGCTGCATCGCATCAACGAAAGGCAAACAGACTGAA
ACGAAACTTGACATCGTTTGAAAAGCTTCATAAAGTGAATACGAGATGGA
AAACAACAGATCGCGACTTTCGAAGTCAACATATGACATTTTTGCGTGTG
AAGTCAAACGAAACAGCATCCACACTATATAGCAGATGTTCTGAAAGAAT
GATGCTCTTAACATTAAAGAAGCGATATGCAGATGGTTCGGCGATCGCGA
CGAGATTGAGCAAACAGATAAATAAAGTATGTAAAGAAATCAAGAACCTG
CTTGCCTCATACAATTCAATGAGATTGGAAATGTCACCAAATTTCAAAAC
TATAGATTACAAAGATGCCCTCAACACAGAGGCTCCAATATATAATGAAG
TGAACTTTGTATCCAACGTCAATGAGGTAAGAAGCTCGTCAATCCCTACG
AATGTTGTGAAAACATTGGTTCAATTCTATTTGAGAAAACAAAGAGCACA
GGAGGAGATCGTTATAGTTCAAGAAGAAATGAAAGCAACGTTGTCCTATT
GGAGAGACCAGTTAAATTTTCTTGTTGAATGTGCTTCGCAGCAAACGTCC
TTTGGGTTGAAATATTTACTTCAAGAAAGAATATTCATTGTTAACAGCTT
GACAAAGGAATTAGAACAATTATTTAATTCTGTTACGAACATTGAGCTTC
AGACAGAATATGTTAATCGTAACTTGGATGTTTGTATCGATGAAATGGAC
GGTATTTACAGTGACAGTGATTGTTCAAGTGAGGACGAAGAAGATTTATG
TTCGAGTGGGAGCGACATTGAGGATTCAGATTTTAATGGTTTATACATTT
AGGCTTGATATTGCAACTTATGTNGGACGAAGAAGATTTATGTTCGAGTG
GGAGCGACATTGAGGATTCAGATTTTAATGGTTTATACATTTAGGCTTGA
TATTGCAACTTATGTCCAtgtaaaaagttgtttttaatcCTTAACATTTT
TATAGATTCATTAACCAAGGGTATCATCTAGAATTAGTCCGTtagatttt
aaagttttagcctcctaattgacaaaaaaattaggttttcttTCAAGCTT
AGCTTGTAATGTCGGAACTCTGGAACTTAATACTTTTTATTTCCTTTCGA
ATAAAAGCCCGC
Run BLAST on NCBI

protein sequence of TCONS_00071591-protein

>TCONS_00071591-protein ID=TCONS_00071591-protein|Name=TCONS_00071591-protein|organism=Clytia hemisphaerica|type=polypeptide|length=612bp
MEFPKKRNGSKIKSKWIGLRKRKTKIAGPPKITNFKISNVPVTNDDNGYD
CDVENFDEHDVGTYDEDFVPKKQCYGINKEKELICWDKHNIDYCLIYAMK
FNTFPSHCCFCNDEVITSFVWCKSCGPLSFYCHDCAYKIHKNTLFHSLVE
VQVDGCNVKPFKVKSVLQTDHVKACTSSYSRTLTVISETGSTHQCQIYFC
KCTEEFNTLVHLDLWAVTPIKPNTVISMNLLHLFVALQLEGKISFSSFCD
GFSWKSGVVDHDLKRYLNRMTQTDSLDQFRHFRRQLTSLKTICPNYDGLE
KCASCPKENGSIFYCFDANFGLVLKSSASKSKRLAMRSENLFILDEEVKT
FMESYDDTLKTKDCSNFQAGNNLRSKRKTKKLSVTGVFGMSCRHEFPKLF
LNMQHGERLGYAVLLLDQILNDTEKKRLDVHIIYDIACVLKSHLQKKNTF
TKYQDFKFGIPVFHSYGHRGDCQVKNSIRRLDSFGLMDGELMERLWSYLR
SFSKITKEMTPAHRTDLLSDALLHFGSKKMGNIGKYLVFLFQKATRTLNS
CDSEIKTICSKLPAHVDEEIIKSWKKEEDNAVSQNGKLIQKKKLTHLIDM
TIDMTNDKCLSF
Run BLAST on NCBI

transcript from alignment at scaffold_62:390043..402149+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071591 ID=TCONS_00071591|Name=TCONS_00071591|organism=Clytia hemisphaerica|type=transcript|length=12107bp|location=Sequence derived from alignment at scaffold_62:390043..402149+ (Clytia hemisphaerica)
aaattatgcAGTAATAATATCAAACAAGGAAAATATTATCAAGTATGGAG TTTCCTAAAAAACGAAATGGTTCAAAGATCAAATCAAAATGGATTGGttt aaggaaaagaaaaacaaaaattgcagGACCACCTAAAATTACtaacttta aaatttcaaatgttcCAGTTACTAATGATGATAATGGTTACGACTGTGAT gtggaaaattttgatgaacATGATGTTGGAACTTATGATGAAGACTTTGT ACCTAAAAAACAATGTTATGGTATTAACAAGGAGAAAGAATTAATTTGTT GGGACAAACATAACATTGATTATTGCTTGATTTATGCAATGAAATTTAAC ACTTTCCCGAGCCATTGCTGCTTTTGTAACGATGAAGTTATCACATCTTT TGTATGGTGTAAATCATGCGGACCATTGTCCTTTTATTGTCATGATTGCG CttataaaattcacaaaaacacACTCTTTCATTCATTGGTTGAAGTCCag gtttgtttgttttcttcTGGTCTGTCTATAATAGGCACCCTATTGGAATT TCATTGtggttgatatttttcaaattcgaaaGTGGGGGCTGGGTTGATGA CAAGTTTCATATAGAGGTTTCCCTATGTGAGTGGGATGCCTTTGNGGGCT GGGTTGATGACAAGTTTCATATAGAGGTTTCCCTATGTGAGTGAGATGAC TTTTTCCAGATGGAGGTCAGAGAGTTTATTGTTGATTTCAAAGTTGAGGG AGTTAAGGTTGAGGAATATTCTCgaatatttattaaaaagaacaaaaggT CTGCTCATACTTCTGAAGAAATTTACAAAGTTAAGTGTTTAGATctcttt tgaaaacatttttgtctCAAGTTTAGGCTTGGATATGTCCTCAAGATGTA TTTTAAATGATTACAGGTTGATGGATGCAATGTCAAACCATTCAAAGTAA AATCTGTTCTGCAAACTGATCATGTAAAAGCATGTACTTCTTCTTATTCA AGAACATTGACTGTGATTTCAGAAACAGGTGAATTTTATTTAGTTTGGCG TATACTTGTTGCAAAGTAATGACTGCCAGTACATTCTTAAATACACTCTC CTTGGCTCAATCTAGGCTGCAAATAAGCATTGTTAGTCTTCAGTTGCAAA AAATGGTGGAATGACTGAAAGTCCTTTTGTGCACGTcagtttttaatgct ttattCATATAGGGAGTTTCGGACTGCGTTTAATAAAAATTCATAACAAA CAGACTTGTACTTTTTATTTGCAACCCTTGCCCGATTATTACAAATTTGG ATTATAGTATAATCATTAGTATAATTAGTATAATATTGTAGTTCTTTTTA TTTCATGAGTATCGACAGGCAACTGtttgaatattattattatggacttt ttggttatttttattCGAATAAAACATATATAGAGAGTATTTTTAATTAC TTATATTTACCTTAGGATCAACTCATCaatgtcaaatttatttttgtaaa tgcacAGAAGAGTTCAATACTTTGGTACATCTGGATCTATGGGCAGTAAC ACCGATAAAGCCAAATACAgttatttcaatgaatttgttACACCTTTTTG TTGCATTACAGTTGGAAGGGAAAATATCTTTTTCGTCTTTTTGTGATGGT TTCTCTTGGAAAAGCGGAGTGGTTGATCATGACCTGGTAAGATACTATAT GggtgaagaaatttctaaaatttttgtccaactatcttctacCAGGGGAT TGGGTGGCAGAGCAACATATGTAATGCATGCATTTTGTTCTTATTAGGAC TCTAGTACTGTATATATTCTCATTTCATAAGAAACATTATAATACCCAAC TTCAAAATTgagatttattgaaaaatattgattagAGATCTATTTTTAAG gtcactttttgttttgaaccaATGAAGCAAAAGCTGTCCTTCCCAGGCAA AACAAATTGACATCTTAACTattttcaatctggcgtttgtacAAAAACCA GGCAAGCCGTGCAACTTTGATGTAATTTAACTCGTTTCAAATTCTACCAT ACATATTCCACTCTAGCCCCTGGCTATACCTCATTTGCTTGAACGGagca aacacaaaaaaatctacACAATTCTATAATCCAAAAAAAATGTTACAAGC AAAAACCGCACAGTAAATTCTCTTGATGTTGATCCTGATCTCtacttttc ccttttttctatatcaagtattttgagaaaaaacaatCAACAATCAGCAT TTCAAAAGGCATCTCCACTGTGATAATTTTTAGTCGTTCAGTTAGGagag aaatatattttgaaaaaaacgtaCTTTTTAGAAGAGATACCTGAACCGCA TGACCCAAACGGATTCATTAGATCAATTCAGACATTTCCGTCGACAATTA ACAAGTCTGAAGACAATATGCCCGAACTATGATGGTTTGGAAAAGTGTGC ATCTTGCCCCAAGGTATTAAAAAATTTAagtctttactttttttaaacat aaacaAGCTACCGTATGTCCATTTTGATCAAGTGATTCCCTATCCTcagt aatttttgaatttttatgtaaCTTTGCTTGTCTCAAAAGATTGTGGTGTC AAACAAAACATTGGGGACTGTTTGTAAACTGCTGTAAGATATTTATTTTG CATCGTAGAATATGAAATTACACatataaatcaaaatatttttaaattgg aCAATTTGATTCTTTTAAGGAGAATGGAAGTATTTTCTACTGCTTTGACG CCAACTTTGGACTTGTGTTAAAAAGCTCTGCTTCTAAATCAAAGAGACTC GCTATGCGGTCGGAAAATCTATTTATCCTTGATGAGGAAGTAAAAACCTT TATGGAAAGCTACGATGATACTTTGAAGACAAAGGTACAGGATTTAATTA CGTTGTGAACTTTTATTAaaagattaaaatatttttcaagtccGTTAAAG GCTTTTTATTGACAATCAATGTTTTGAAATAATAAACTAACTCCAAATTG CTACACAGTGTTTCATGCTATGCAGTCGTCAGATAATTCGTTTGTGGTTG TTTTTTGCAACCATTCAGACATTCTTCAGCACTGTGTgactctatttttc ttttttacttaatGTATCAacaaatagaaaatttcaaggtaaatttttca ttcaaacgaATATAAACTTGAGCCTAAAGGCGTGTGTTTTCATTCAGTTG TTCTGATTGTTGATAAAATAGACGATTAATAATAACATCTtaagaaattg attttgtaaTGATTTGTAGAATGAAATTTTGGGAATCTGCTCAAAATTTG CGAATTTGTGAAATTCTATTTTAATaaagtaattttttcaattggCTTAG GATTGCAGCAATTTCCAAGCTGGCAACAATTTACGGTCAAAACGAAAAAC GAAGAAACTCAGTGTAACTGGAGTATTTGGTAcattaagtggattaattt tcacgtGGACTTTTTTTTGCGAATTAGGCTCTTTTTTacctgattttttt catttagctgatgattttaaattttttcatagaggactaattttggcaaa gatggctgaaattcgcgaaaatcgcaaaaattaatccacgtgaaatttaa tccacttaaggtatgtcTTGTCGTCATGAGTTCCCGAAGCTTTTCTTGAA TATGCAACACGGTGAAAGGTAATGATTCAGAATTGCAGTAATGCATAAAC GAGCAGtttttattctcaacttcaagCGTGCTAGAATCATAGAACAGTGA ATACCTAGGGTACTTTAGTTTTTTGGCCTTGGAACAGTTTTTCCGTCGAA ACAAAGATGACAGCATTAAGATAAATTTTTTGTtagaaatcttaaatttt ttccATCTTAGCAGTAGAGAACAGCTAGCCGATATCTagtttgaaattag aaaatGGGTCCAATATAACACGGAAACACTTCTTATAATACATAATCTTC AAGTTTACAATTTGTCAAGCTTTTAAANTTCTATCTTAGCAATAGAGAAC AGCTAGCCGATATCTagtttgaaattagaaaatGGGTCCAATATAACACG GAAACACTTCTTATAATACATAATCTTCAAGTTTACAATTTGTCAAGCTT TTAAAACCAGAATTTGAGACGGATAGAACTCCAGTGGTTGTGTAACACAA GGAGTGttgataagatttttttattgttatatCATCATCAGAAATAGTAG TTGAATTGTTGTTTTAGATTGGGCTACGCCGTTCTTCTCCTTGATCAGAT ACTGAACGATACAGAAAAAAAGAGGTTGGATGTGCACATCATATATGATA TTGCATGCGTTTTGAAGTCACATTTGTAGGTAGAAAAttaggaaaacttt tttttctaattaTCATACctcatttaaaatttcttttttcaaaagagtGC AAATAACTCTATATAATAACTCTCTAAGACTTTTTGTTTTATGTAAATCA CTNGGTATCCAAGGTAATTTAACGATTGGTAGTTGCTCTGGATCATTTCG ATTGTCGGTTGTCTGGTTCCTGGTTCTGTCGTAATCGTTTGCGAAACGGG TTAAAGTGTTACGATCATAACCGTTCTCGACAAAGTTATTTATTaagaaa tcaattttcttcCTGACGGAATCGGTCATCACAAATTCTGTACGCACGAT TAAGAAATCCTGAGAATATACTCTTCAACACCTTTGGGTCATGAGCTGAA TTAGGTTTAACTTGCACGTTAGTGAtcgcatttttacatttttaccaagc aggtcgaaatattgtttacacgaaaaatatatacagaatgaccattaaaa tgttatttaaattATAATCTACATTCGTATCAAAGTATGACACTNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTATCTTAGCAA TAGAGAACAGCTAGCCGATATCTagtttgaaattagaaaatGGGTCCAAT ATAACACGGAAACACTTCTTATAATACATAATCTTCAAGTTTACAATTTG TCAAGCTTTTAAAACCAGAATTTGAGACGGATAGAACTCCAGTGGTTGTG TAACACAAGGAGTGttgataagatttttttattgttttatcatcatcaga AATAGTAGTTGCATTGTTGTTTTAGATTGGGCTACGCCGTTCTTCTCCTT GATCAGATACTGAACGATACAGAAAAAAAGAGGTTGGATGTGCACATCAT ATATGATATTGCATGCGTTTTGAAGTCACATTTGCAGGTAGAAAAttagg aaaacttttttttctaatgATCATACctcatttaaaatttcttttttcaa aagagtGCAAATAACTCTATATAATAACTCTCTAAGACTTTTTGTTTTAT GTAAATCACTGTAACATTTCTTTGTAGATATTGACTTAGATCACCGACCT ACCTCTCCCATCTAATTTTAGCCTATTACACGTAAGACTGtatgttaata ttttttacGTTATCTTTAGAAAAAGAATACTTTTACCAAGTAtcaagatt tcaaatttggcatcCCTGTTTTTCATTCGTATGGTCACAGAGGAGACTGT CAGGTGATTATTGAATTCTATGATGGTTTTTCTGctttcagaattttgaa aattttgcgatTTCCGCGAATTTTGAAcagattcgcgaaaatttattcTC GCAAAAACACTTTTCAATAAAGTCTACGCTCGACCATAAATTCTCCAACA GCTTGGAATGTAATTTTGGGATACCTTTTGTGTTGAtggttttgaaaaat ctcagGCTTCAACGCTCTATCTtacaaaaaatagtgaaaatcacaaataa aaacaaaagtcgacaaattttcttttctcgcttcatttttttgaaagtta atttgttatttttaggTGAAAAATTCAATCAGAAGATTAGATTCTTTTGG CCTTATGGATGGTGAATTGATGGAACGCCTCTGGTCATATCTTCGATCAT TCTCAAAGATTACCAAGGAGATGACTCCAGCTCACCGCACGGATTTACTT AGTGATGCTCTGCTGCATTTTGGCTCAAAGAAAATGGGAAATATCGGTAT GATTACTTTGAAAAGTTCTATACTAGTGTTACATAATTATGATATTTTTA AGCTGATTAATCACTTGGTGTCATCTATTAAAGCTTTGTTTATCACTGGT AACGCGAAACATTTTTAAATCTTTACTTAGGctttacttttattttcttt taggaAAATATCTCGTGTTTCTATTTCAAAAAGCAACAAGAACTTTGAAT TCTTGCGATTCAGAAATTAAAACGATTTGCTCTAAACTGCCTGGTAAgtt ataattttttgatttagaATAACTTATTCTAGTAAGCATGAAGCTTAGCG AATTGAGGTCTGCTTGAATAAGTTCTCGTCAAAATCTATATTAGTTCAAT TCTTAAAACAAGCTCTCGCTAAAAGTCATTTCGATATTGGTTTCGGTTGG TTCTAAAATTcttctttagaaaaacattgtaaatttagaagaatttaaaa gaaaacagTTCAAAAAGGCCAGTCAAATTTTAACACTTTTTCAACACTAT TCTAGTTAATTTGAAAATTCTATCATGACTGATTCATGATACCTTTTATA AAATTCCTAAAAGAATTGTTCAAAACATTTAGCTCATGTGGATGAAGAAA TTATCAAATCATGGAAAAAAGAGGAGGATAACGCCGTAAGCCAAAATGGA AAACTTATACAGAAAAGTTAGTATTTTGCAACGTCATCTTTTTCTCGTTA CTGGAATGACTAAGTAGAAATCTGTCGAACCAATAAGGTATAAGCCCCGA AGGGGCCAGAGTGGAATCTGGTGGTAGGATTTGAAGCCAGTTAAATCCTA CCAAATTATTTTTTTGCCGATCCCCCATATTGAATTCCTGTACTGAAAAA ACTTGGGTCAACCGCTAAATTAATTTTTTGGCAAAATTTCTTCCTTTAAG GTTGAGTTATGGGGACTTAAATGTATTTAAAAATATTTCGATTTTTGTAC GTGCTGGAGTGCTTCAAAAATGAAGAATAACTCTTTTTTATTATTCTTTA GAAAAACTGACCCATTTGATTGACATGACAATTGACATGACAAACGACAA ATGTCTGTAAGTAACAACGACTACGGACAACAAGATAATGACTGTACTCT GCTGACGACTTACATTTCTGAATATATATTGAGGTGTTGAGGATTTCTTT TTTTTTACCGCAGTAGCCATAAATTTATTTGAGACGTACGATACTTGAAC ACAAAGACTACTGACTCATAAGACAACTAACAACTTGTAAATTTGTTTTC CTGTTCTTTTGACCAACTTTTCACTAGCATTGTGGAGTTAATATAGTTTT GAATGAGTAATTACTGCTTTGTGTATATTTTCAGCTCCTTCTGATTGGAA GCAAGTCTACTACCTTAAACTGAAAGACTTTTACAAAGAATCTGCACTGG TTTTAATGAGCGAAAAAGTATGCGATGCTGCATCGCATCAACGAAAGGCA AACAGGTAAAACTTGCTTAAATAACGAAGAATATGTTTACCCGTTGGTCT TTACCCCGCTGAAAGCTGAAAAAAGAAAATGATTGGAAGGCAAGCCAACG AAATGTGTTGAGCTTTACTCTTTCAGACTTGAATTCAGTTTCAAACTTTA AGGGGATAATCAGATGATTTTCGATATTTGGCCTACAGATTCAAGCAATG GCTCTGAGAGAAACCTCCAAATTTTTTGGCCCAGTTATTTTCCAAAGCTG ATATAAGGGGCTAGGACTGTCATCACGAGTATACTGTTTTAGCCTAATCT CAGAGTGAGAGTCCTACTATTTCGGCTATTTTCAAAGCGCAATATCTCAG CTTAGGAAAATGATTGGGTCAAAAAATGGGCCATGGAGTGAGCCTATTGG CCAAATATAAAAAATCATGTGATTATCCCTTTAACATTACATAGATTTCT CGAAATAAAAGAAATTATTTTCCGAGATTTTTCGATCCAATTGAGTGTAA TTATGTTGTTATTTCATTCATTAGACTGAAACGAAACTTGACATCGTTTG AAAAGCTTCATAAAGTGAATACGAGATGGAAAACAACAGATCGCGACTTT CGAAGTCAACATATGACATTTTTGCGTGTGAAGTCAAACGAAACAGCATC CACACTATATAGCAGATGTTCTGAAAGAATGATGCTCTTAACATTAAAGA AGCGATATGCAGGTATGTTCGATTCTGAAAACACATTTTCATCAATTTAC GCCGGCTACAGATCAGATTAGTAGATTTTACTTGTAGGCCCCACCATGGT TGTGCTACACAGGGAAAACTTTTGAAATTCGGTCACTTATAATGGCCTGG AGATATTCGGTTTCAATTTCAACTAAACACCTAACGTATTTTATCCTGTG CCCCTTTAAAAGTAGATTTATTAATAAATCTAAATATAATAGAATTCCAG AACTTTCAGACAAATTATCGAAATCCAATCTCAAAAAAAAAATTGTAAAA GGTAAACTCTGACTTCAAAGCAGAGAAGGTTAGAAATAATGGCTGCTCAA ACGATCTATCAATCAATAAGAGGAAATAATATCAGCAACAAAAAGGACTC AAAATTTCTTAAGATATTCAGAAATATCCTCTACGAAAACTTTTTAGTAA ATCCATCTCCCTAAAAAAATCCAAGAATAAAAAATCCAAGTAGAAATTTT TATTCCTTACGCTTCTAATTTTCTCTCACTTCAGATGGTTCGGCGATCGC GACGAGATTGAGCAAACAGATAAATAAAGTATGTAAAGAAATCAAGAACC TGCTTGCCTCATACAATTCAATGAGATTGGAAATGTCACCAAATTTCAAA ACTATAGATTACAAAGATGCCCTCAACACAGAGGCTCCAATATATAATGA AGTGAACTTTGTATCCAACGTCAATGAGGTTGGTGATATTATATTCCCAA GAAATTTCTTTTTTTAATGTTTTTGGTTTTATGATGCGAAGGGTGCAGTG ACAAAATTAACCGGAAAAAGAAAATTGTTTCACGAAATAGACATCGAGTT TTTATTACCTATGAACTCATGCATTGGAAGAAAGGATATGACTCAATTTT CTGTAAACACGCTAAAGCAAAAGAGAATTGAAAATGTTTATGTGTCTTGT AGAGTGCAACCAACGATTTATTGCGCTCCAAGTAGAAGCGCCAATTAGGG GTAGCTCATTGGGTAATTGAAGTTGTATTAAAGTAATAATTGTTTCtact ctctttctctctctttcTTAGGTAAGAAGCTCGTCAATCCCTACGAATGT TGTGAAAACATTGGTTCAATTCTATTTGAGAAAACAAAGAGCACAGGAGG AGATCGTTATAGTTCAAGAAGAAATGAAAGCAACGTTGTCCTATTGGAGA GACCAGTTAAATTTTCTTGTTGAATGTGCTTCGCAGCAAACGTCCTTTGG GTTGAAATATTTACTTCAAGAAAGAATATTCATTGTTAACAGCTTGACAA AGGAATTAGAACAATTATTTAATTCTGTTACGAACATTGAGCTTCAGACA GAATATGTTAATCGTAACTTGGATGTTTGTATCGATGAAATGGACGGTAT TTACAGTGACAGTGATTGTTCAAGTGAGGACGAAGAAGATTTATGTTCGA GTGGGAGCGACATTGAGGATTCAGATTTTAATGGTTTATACATTTAGGCT TGATATTGCAACTTATGTNGGACGAAGAAGATTTATGTTCGAGTGGGAGC GACATTGAGGATTCAGATTTTAATGGTTTATACATTTAGGCTTGATATTG CAACTTATGTCCAtgtaaaaagttgtttttaatcCTTAACATTTTTATAG ATTCATTAACCAAGGGTATCATCTAGAATTAGTCCGTtagattttaaagt tttagcctcctaattgacaaaaaaattaggttttcttTCAAGCTTAGCTT GTAATGTCGGAACTCTGGAACTTAATACTTTTTATTTCCTTTCGAATAAA AGCCCGC

Coding sequence (CDS) from alignment at scaffold_62:390043..402149+

>TCONS_00071591 ID=TCONS_00071591|Name=TCONS_00071591|organism=Clytia hemisphaerica|type=CDS|length=1839bp|location=Sequence derived from alignment at scaffold_62:390043..402149+ (Clytia hemisphaerica)
ATGGAGTTTCCTAAAAAACGAAATGGTTCAAAGATCAAATCAAAATGGAT
TGGtttaaggaaaagaaaaacaaaaattgcagGACCACCTAAAATTACta
actttaaaatttcaaatgttcCAGTTACTAATGATGATAATGGTTACGAC
TGTGATgtggaaaattttgatgaacATGATGTTGGAACTTATGATGAAGA
CTTTGTACCTAAAAAACAATGTTATGGTATTAACAAGGAGAAAGAATTAA
TTTGTTGGGACAAACATAACATTGATTATTGCTTGATTTATGCAATGAAA
TTTAACACTTTCCCGAGCCATTGCTGCTTTTGTAACGATGAAGTTATCAC
ATCTTTTGTATGGTGTAAATCATGCGGACCATTGTCCTTTTATTGTCATG
ATTGCGCttataaaattcacaaaaacacACTCTTTCATTCATTGGTTGAA
GTCCagGTTGATGGATGCAATGTCAAACCATTCAAAGTAAAATCTGTTCT
GCAAACTGATCATGTAAAAGCATGTACTTCTTCTTATTCAAGAACATTGA
CTGTGATTTCAGAAACAGGATCAACTCATCaatgtcaaatttatttttgt
aaatgcacAGAAGAGTTCAATACTTTGGTACATCTGGATCTATGGGCAGT
AACACCGATAAAGCCAAATACAgttatttcaatgaatttgttACACCTTT
TTGTTGCATTACAGTTGGAAGGGAAAATATCTTTTTCGTCTTTTTGTGAT
GGTTTCTCTTGGAAAAGCGGAGTGGTTGATCATGACCTGAAGAGATACCT
GAACCGCATGACCCAAACGGATTCATTAGATCAATTCAGACATTTCCGTC
GACAATTAACAAGTCTGAAGACAATATGCCCGAACTATGATGGTTTGGAA
AAGTGTGCATCTTGCCCCAAGGAGAATGGAAGTATTTTCTACTGCTTTGA
CGCCAACTTTGGACTTGTGTTAAAAAGCTCTGCTTCTAAATCAAAGAGAC
TCGCTATGCGGTCGGAAAATCTATTTATCCTTGATGAGGAAGTAAAAACC
TTTATGGAAAGCTACGATGATACTTTGAAGACAAAGGATTGCAGCAATTT
CCAAGCTGGCAACAATTTACGGTCAAAACGAAAAACGAAGAAACTCAGTG
TAACTGGAGTATTTGgtatgtcTTGTCGTCATGAGTTCCCGAAGCTTTTC
TTGAATATGCAACACGGTGAAAGATTGGGCTACGCCGTTCTTCTCCTTGA
TCAGATACTGAACGATACAGAAAAAAAGAGGTTGGATGTGCACATCATAT
ATGATATTGCATGCGTTTTGAAGTCACATTTGCAGAAAAAGAATACTTTT
ACCAAGTAtcaagatttcaaatttggcatcCCTGTTTTTCATTCGTATGG
TCACAGAGGAGACTGTCAGgTGAAAAATTCAATCAGAAGATTAGATTCTT
TTGGCCTTATGGATGGTGAATTGATGGAACGCCTCTGGTCATATCTTCGA
TCATTCTCAAAGATTACCAAGGAGATGACTCCAGCTCACCGCACGGATTT
ACTTAGTGATGCTCTGCTGCATTTTGGCTCAAAGAAAATGGGAAATATCG
gaAAATATCTCGTGTTTCTATTTCAAAAAGCAACAAGAACTTTGAATTCT
TGCGATTCAGAAATTAAAACGATTTGCTCTAAACTGCCTGCTCATGTGGA
TGAAGAAATTATCAAATCATGGAAAAAAGAGGAGGATAACGCCGTAAGCC
AAAATGGAAAACTTATACAGAAAAAAAAACTGACCCATTTGATTGACATG
ACAATTGACATGACAAACGACAAATGTCTCTCCTTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044483XLOC_044483Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071591-proteinTCONS_00071591-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071591-exon-scaffold_62-1491911889:390043..390542TCONS_00071591-exon-scaffold_62-1491911889:390043..390542Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:390043..390542TCONS_00071591-exon-scaffold_62-1510915933:390043..390542Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:390043..390542TCONS_00071591-exon-scaffold_62-1575043694:390043..390542Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:390959..391070TCONS_00071591-exon-scaffold_62-1491911889:390959..391070Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:390959..391070TCONS_00071591-exon-scaffold_62-1510915933:390959..391070Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:390959..391070TCONS_00071591-exon-scaffold_62-1575043694:390959..391070Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:391508..391728TCONS_00071591-exon-scaffold_62-1491911889:391508..391728Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:391508..391728TCONS_00071591-exon-scaffold_62-1510915933:391508..391728Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:391508..391728TCONS_00071591-exon-scaffold_62-1575043694:391508..391728Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:392374..392505TCONS_00071591-exon-scaffold_62-1491911889:392374..392505Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:392374..392505TCONS_00071591-exon-scaffold_62-1510915933:392374..392505Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:392374..392505TCONS_00071591-exon-scaffold_62-1575043694:392374..392505Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:392762..392926TCONS_00071591-exon-scaffold_62-1491911889:392762..392926Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:392762..392926TCONS_00071591-exon-scaffold_62-1510915933:392762..392926Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:392762..392926TCONS_00071591-exon-scaffold_62-1575043694:392762..392926Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:393393..393471TCONS_00071591-exon-scaffold_62-1491911889:393393..393471Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:393393..393471TCONS_00071591-exon-scaffold_62-1510915933:393393..393471Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:393393..393471TCONS_00071591-exon-scaffold_62-1575043694:393393..393471Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:393653..393710TCONS_00071591-exon-scaffold_62-1491911889:393653..393710Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:393653..393710TCONS_00071591-exon-scaffold_62-1510915933:393653..393710Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:393653..393710TCONS_00071591-exon-scaffold_62-1575043694:393653..393710Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:397268..397379TCONS_00071591-exon-scaffold_62-1491911889:397268..397379Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:397268..397379TCONS_00071591-exon-scaffold_62-1510915933:397268..397379Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:397268..397379TCONS_00071591-exon-scaffold_62-1575043694:397268..397379Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:397612..397695TCONS_00071591-exon-scaffold_62-1491911889:397612..397695Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:397612..397695TCONS_00071591-exon-scaffold_62-1510915933:397612..397695Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:397612..397695TCONS_00071591-exon-scaffold_62-1575043694:397612..397695Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:398008..398188TCONS_00071591-exon-scaffold_62-1491911889:398008..398188Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:398008..398188TCONS_00071591-exon-scaffold_62-1510915933:398008..398188Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:398008..398188TCONS_00071591-exon-scaffold_62-1575043694:398008..398188Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:398346..398435TCONS_00071591-exon-scaffold_62-1491911889:398346..398435Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:398346..398435TCONS_00071591-exon-scaffold_62-1510915933:398346..398435Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:398346..398435TCONS_00071591-exon-scaffold_62-1575043694:398346..398435Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:398775..398858TCONS_00071591-exon-scaffold_62-1491911889:398775..398858Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:398775..398858TCONS_00071591-exon-scaffold_62-1510915933:398775..398858Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:398775..398858TCONS_00071591-exon-scaffold_62-1575043694:398775..398858Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:399194..399248TCONS_00071591-exon-scaffold_62-1491911889:399194..399248Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:399194..399248TCONS_00071591-exon-scaffold_62-1510915933:399194..399248Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:399194..399248TCONS_00071591-exon-scaffold_62-1575043694:399194..399248Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:399527..399647TCONS_00071591-exon-scaffold_62-1491911889:399527..399647Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:399527..399647TCONS_00071591-exon-scaffold_62-1510915933:399527..399647Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:399527..399647TCONS_00071591-exon-scaffold_62-1575043694:399527..399647Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:400167..400354TCONS_00071591-exon-scaffold_62-1491911889:400167..400354Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:400167..400354TCONS_00071591-exon-scaffold_62-1510915933:400167..400354Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:400167..400354TCONS_00071591-exon-scaffold_62-1575043694:400167..400354Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:400877..401070TCONS_00071591-exon-scaffold_62-1491911889:400877..401070Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:400877..401070TCONS_00071591-exon-scaffold_62-1510915933:400877..401070Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:400877..401070TCONS_00071591-exon-scaffold_62-1575043694:400877..401070Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1491911889:401414..402149TCONS_00071591-exon-scaffold_62-1491911889:401414..402149Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1510915933:401414..402149TCONS_00071591-exon-scaffold_62-1510915933:401414..402149Clytia hemisphaericaexon
TCONS_00071591-exon-scaffold_62-1575043694:401414..402149TCONS_00071591-exon-scaffold_62-1575043694:401414..402149Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_62supercontigscaffold_62:390043..402149 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 6.21442e-05 0 0 3.10126e-10 0 2.51888e-07 0 0 0 0 0 0 0 0 0 0.467399 0 0 0 0.00770317 0 0.10347 2.18457e-08 0 0 0 0.306486 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071591 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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