TCONS_00071635 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00071635
Unique Name	TCONS_00071635
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1794

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_63:182722..197258+
coding sequence from alignment at scaffold_63:182722..197258+

transcript sequence

>TCONS_00071635 ID=TCONS_00071635|Name=TCONS_00071635|organism=Clytia hemisphaerica|type=transcript|length=1794bp
ctaatcgaactgcaattgcttcaaaaattaaAAGGATGGCTGatataaag
aaaacaaaaccaGAGAAGGATATTGAGTTGATTCAAAGGATTGGAAGTGG
AACTTATGGTGAAGTCTACAAGgcAAGATGGAAAGCTACAGGGGAAATGG
CTGCTGTGAAAATTATAAATATTGAGCCAGGTGATGATTTTGATATCATA
CAgcaagaaataaaaattatggAAGAATGTAAACATTTCAATATTGTTCA
ATACTTTGGAAGCTATTTACGGAGGGATAAGTTATGGATCGCTATGGAGT
TTTGTGGTGGTGGCTCTTTGCAAGATATTTAccatgTTACTGGTCCACTC
AACGAGCCTCAGATTGGAGCAGTATGCACGGAAATGCTTAAGGGGCTTGA
TTACATGCACAAACAACATAAATTACATAGAGATATCAAAGGAGCAAACA
TTTTGTTGACTTCTGAGGGTGATGTTAAACTAGCTGATTTTGGTGTTGGG
GCTCAAATCACATCAACGATGGGAAAACGTAATTCATTCATCGGGACTCC
TTATTGGATGGCACCTGAAGTAGCAGCAGTTGAGAGAACAGGGGGATACG
ACCATCTGTGTGATGTATGGGCAGTGGGGATAACAGCAATAGAACTGGCA
GAATGTCAACCACCACTATTTGAACTACATCCTATGCGTGCACTGTATTT
GATATCCAAGAAAAACTATACACCACCCTCAGTAAAAGACAAAAGCAAAT
GGAGCTCTTCTATGAGAGAATTCATCAAACTTTCGTTAACAAAAAATCCA
AAGAAAAGACCAAGCTGTGAGAAACTACTGCAGCATGCATACTGTCAATC
ACGTCAAGTCAGGCGGGTACTGACAGAACTGCTTGACAAGTTTGATAAGT
TGAAACAGCAGAAGAAATATCGCTACAAAGAAGCCAACACTGATGAAGat
agtgaagaagaaaatgaaaagaatgagaaaaaagaaaataaccaaAACAA
CGAAAATAAGGATAAAAGAACAGTCAAACGGATCAAatctaaaaaagaca
aaaacagaaaagataAAGTCAATTTACCGGACAAGGACATGCAGCCGGTA
CAAAGAGAAACGGAACCCGAACGGAAGgcCACGATAAAAGCCAAACCACC
TCCACCTGTTCCAACACACagcTCTGAAGGACCACCAACGTTGACCGAAG
CACCAAAAAGAAACCTTCCACCACCACCTCCTTCACCTAAACAACGATCA
AGCTCGaatGGTGCTGCTGCTCGATCTTCTCCCAGTCCACCGCCTCCCCT
CCCACCACGCCCACCAGCAAATTCAACGCCATCAGATGACATGCCCACCA
TCAAAGCGCCCTCACAAGGAAAAGGAGCCGCCCCACCACCACCTTTACCG
CCAAGAGTTCCTACCGTGCACAAGAGGGAAAGGcCTCCATCACAGCTATT
CACACAAAGGGCTACGGCGAATtgcttttcaaagattttcaacgAATGTC
CATTAAATATCTCTGCCGCTACCAGTTGGACGCATCCAGAAACTAAAAAT
CATCATTTATTGTTTGCATCAAACGAAGGGATTTACAGCCTCAATTTGGA
TGATCTGCAAAATATAGAAATGTTTCAGATTTTTTCACGGCCATGCAGTT
GGGTGTACGTCATCAAGAATATATTGGTATCCATCTGTGGCTCTCCTGCA
CACGTCTACATGCACAATTTGTTGTCGCTTCATGGTCAGCAAAACATTGA
ACAGTTTTTACCAGTACCAAAGTAAGTTTAATAGTTGGTTCAGA

Run BLAST on NCBI

protein sequence of TCONS_00071635-protein

>TCONS_00071635-protein ID=TCONS_00071635-protein|Name=TCONS_00071635-protein|organism=Clytia hemisphaerica|type=polypeptide|length=590bp
NRTAIASKIKRMADIKKTKPEKDIELIQRIGSGTYGEVYKARWKATGEMA
AVKIINIEPGDDFDIIQQEIKIMEECKHFNIVQYFGSYLRRDKLWIAMEF
CGGGSLQDIYHVTGPLNEPQIGAVCTEMLKGLDYMHKQHKLHRDIKGANI
LLTSEGDVKLADFGVGAQITSTMGKRNSFIGTPYWMAPEVAAVERTGGYD
HLCDVWAVGITAIELAECQPPLFELHPMRALYLISKKNYTPPSVKDKSKW
SSSMREFIKLSLTKNPKKRPSCEKLLQHAYCQSRQVRRVLTELLDKFDKL
KQQKKYRYKEANTDEDSEEENEKNEKKENNQNNENKDKRTVKRIKSKKDK
NRKDKVNLPDKDMQPVQRETEPERKATIKAKPPPPVPTHSSEGPPTLTEA
PKRNLPPPPPSPKQRSSSNGAAARSSPSPPPPLPPRPPANSTPSDDMPTI
KAPSQGKGAAPPPPLPPRVPTVHKRERPPSQLFTQRATANCFSKIFNECP
LNISAATSWTHPETKNHHLLFASNEGIYSLNLDDLQNIEMFQIFSRPCSW
VYVIKNILVSICGSPAHVYMHNLLSLHGQQNIEQFLPVPK

Run BLAST on NCBI

transcript from alignment at scaffold_63:182722..197258+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00071635 ID=TCONS_00071635|Name=TCONS_00071635|organism=Clytia hemisphaerica|type=transcript|length=14537bp|location=Sequence derived from alignment at scaffold_63:182722..197258+ (Clytia hemisphaerica)
ctaatcgaactgcaattgcttcaaaaattgtgagtgttcgattaggtttg
attaatttttctaATCGAACTTtgatcgttcgatggagtttggTACACCG
GtaactttttccccaaataCCGGAATACCGAACACAATTTAACTACAAAT
ACggatatccaaaatttttacatTCCATTTGatcccaatcaaaaataaac
ccctgttttgtgacatttttactgtcagccACTAAATTGACCATAACTTG
GGAAAATTATGTGGCTTACACTTAGGATNccctgttttgtgacattttta
atGTCAGCCACTAAATTGACCATAACTTAGGAAAATTATGTGGCTTACAC
TTAGGACCGCTTTGATGGTTAAGCTGAGGAAATTAGCTATCCATTGCATA
AAGGGCGAATTTTTGTGGCTTACTTAAAGGGGAGTTACACGCAAATGAAG
TGTGGGCAAAAAATGTGGCTGACTGGTCATCTGGCTTACCCTTCCAAGAA
ATTTTGAAGGCTGAGTTCTCAATAATGGAAACAGTCAGAAATATACTTTC
TTTTCAGCATTGCCAGCAAAGGGCTAAATGTTTCATTAGCTGCACTAATT
CGTGGCTTAGAGTTTGTTAAGTGGGAAAAATTGTGGCTTACACAAGGGAA
ATGTAGGTGAATAGGTGAAAATAGGTGAATAGGTGAAATGTAGATGAAAT
TTTATGTCTcgcattttttaagtttttggcaCTCAATCATTAAAGTATAA
CATCAGTAGGTgtaaaaattacaataatttTGTTGTAAGTACAATTTTGT
GGCTTACAAAGTCAcattgaaaattattgaaaagtgaGCTACAAAAAAGT
ACATTTAACAGCTAGaaagtatgtacatttaacatttctttttaaattca
acctttcctctGTCAAGTTAATTAAGAAAGTCCCATTCTAAGATCTCTTA
TCTAATTTGTGTGGCTtacatttctaaaaaagatacaaattttgagttga
agccacatttttagcccaattagcaaaaaaaaaaaaattattcataatGT
CTCAGTATTTCCCACAacattgtaaaatttcaaggcTTATCGATTAAGAC
TTCATCAGCTATGACAAAAAGTTGTTATTggccatttttcaaaatgtcac
actatttttgattggGATCATTTCATGGGCCTATTTCGCGAGGAGAGGCA
TTTCAACTGCAAGAATTATTGATGAAATAAGGAGTAAGGGATACCCTgtt
gaaaacttaattttcaacTGTTATTAGCTCAGTATATATATCAGACGAAC
GATCTAATTTTCAAGTGAAAATAGCATAGAAGAAGTGAAGTTTAATTACT
GAGAAAGTGCAACCATGGTTTGTGCTGACCaaagaaaatttagattttaa
caCTTTCTTATTTGGCTAAAAGCACTATATTTTAGAATGGTTTTACTATt
gtactctcaggtacctaatagccggggggattgacctaccttaagggaat
taattttcacggcaactaattttggcgaagaCAGCTTCCCTagcaaaata
atttaatttttgcgggaattatTTTCTTGACAGCTTCTACTGTAAATTTT
TGCGAGGAATTGACAGGGACTCAATAATTTATCCTGTTTGTaatggctga
gggaaagtaatgtatgctGTAGTAACTTGTTATTCAATAGCCTGTTATGT
TTTCCTGAAATAGCTATTTAAATCAATCACATTCAAATGAAAAGGAAccc
ttttgatatttttgttgattgtttagatagaagtttttgaaatatttaga
aAAGGATGGCTGatataaagaaaacaaaaccaGAGAAGGATATTGAGTTG
ATTCAAAGGATTGGAAGTGGAACTTATGGTGAAGTCTACAAGGTAAATAC
CAAAATATCCAGAGCGTTGTGTGTACACCAGGTGTATAACTCAACAATTA
TAATTATAATGTGTATGTATGTCCCATTAAGCCAGAGTTGAACCTCAAGA
ATTATGACGAAGGTTTAAGTTCTGTTAATAAGATTTCTGAAATTATGAAT
tgattcatttattttttaggcAAGATGGAAAGCTACAGGGGAAATGGCTG
CTGTGAAAATTATAAATATTGAGCCAGGTacttttaaataacttttgaat
tAATTCGGCctgaacaatttttttactcTTGTCAGACAAATTGTTGGATG
ATAGtatatttgaaagtttgaaagtatATGAAGGAAATTATACTGAAAGT
ATATTTCCTGGAAAATTTACGTTGGtgttaaattcttttgttctatATAG
GTGATGATTTTGATATCATACAgcaagaaataaaaattatggAAGAATGT
AAACATTTCAATATTGTTCAATACTTTGGAAGCTATTTACGGTGAGATGG
TAACTTGCATGTAATTTACCTTATTTCCTCTATTTAGCATTATTATCAGA
CGCGCGTATCTACTGAcatggttgattgattgatgatTGGCTGTACAATA
TTGTCaaatatatagcttccatggagAAAGCAGATTTATGagcttataaa
ttggaattaaatttgaaaacaagaaataaCTTGTCTGATATTTCTGTACC
TGTACCCCATTGACCATAGACaagcaaaaaacaaaatttattgagatGAA
GACGTTATACTTATGGACTTGATTTGAAACGGATATAGGAACAGTAGAAA
TTACTACGTGGTCAATGTAACAACGCCAGTATAACCAAATCAGTCTTCTT
TTatgactttgaaaaaataacagtCGATGAAATTATTTCGTACCCAACAA
ATTCTTATTCGCTTCTTTCCTATCATAATGCTTTAACATATAATACAGAT
GAAGTGCAGGGAGTGATTAAAGCTAAGAAATTGCGTAGCCTAAGTATCAg
atttcaagttttcaaagataaATTATTAATGAATTTGGAGCTGTGGTCCT
GTTATCCTGCAGGATAATTTGCAcccagaattaaaaaaaaaagttaaaca
agGAAAATAACTGAAGCTACTTCCAGCTGAATGTAGTAGTCTTAAGTAAC
GTTAACGATCTTCTAAATTGAAAAAGTAATCCAATATTGACAAATCAACC
TATCCCTTCGATTTCCAGACGGAAAATGACTTAGTTTCCAATACTTTTCA
GTTTCTTCTCCCGTTCCCCCTCGTTTCCAAATCGTTTCCAAATCGTTTCC
TATGCGTTTCCATTTCGTTTCCACCCATTTCTCTGTCGTTTCCCCTCGTT
TCCACGGCGTTTCACGTTTTAGTAAGTacgataataaaccatttatttgg
gcgcagtctcatccaatatgaaaaatattgaattcgactttgtccaataa
ctgcttaaaataataaaattaacCTCACCTCAAAGAAAGAAGGATTGCAC
CTCATAGGGCTTGTTTAATTTGTACAAGCATAATTTTCTCTATTTAGCAC
NGATTGCACCTCATAGGGCTTATTTAATTTGTACAAGCATAATTTTCTCT
ATTTAGCACAATACTCCAATGATAACTGCACCTTAAATGAAAAGCATGTT
GTTGTACAATCTTGTTTCAAGCTAGTAGTACTGTAGTCAGACATCAATGG
TTTATAATTATAATATATTTATTTCAGGAGGGATAAGTTATGGATCGCTA
TGGAGTTTTGTGGTGGTGGCTCTTTGCAAGATATTTAccatggtaatttt
tttttaatttggattTGAAAGTTGTTATAATTCAATTTGACAAACTGGTG
AACACAGTGCTGTGCTGCATTggcctttaaacctactccTAACAACATCA
TGGCAAAACTTTAACTTCAAATTGATGTTATTTTgaactccccaagcgat
ttaaaTACCTGAAAACTGAACTTCTTTAGACGATCTTTTGAGGGTTGGTA
AATGACCGGTAGAAATTTACCAAAAGGCTGCTACGAGTCTAGTTAATTTA
GCTGCCGCTGTGAAGCATCCGGTTCCAGACCGGCCCCAGACCAGCCCCGA
TCTCGCCCCGTGGACATTCACTAAAAATCACTAACTAGCAGTCTGGACCA
ATCTAACGAACAGACCGGACCGGTCTAACGCAGCCACAAGTCTCTAAAAT
CGGCCAGGACCGTTAGAGATCACATTTCTAGAAGGTCTGGAGGCCGATct
aaaacaaatattttaccGCTACTAGACCGCTCTCGTCATACAGGACCAAG
ACCGGtctgattttcaggtactttaaatcgctttgGAAGTCACATTTATG
TTTAAAAATTAACAATTCATTTTATTCTCTAAGTTACTGGTCCACTCAAC
GAGCCTCAGATTGGAGCAGTATGCACGGAAATGCTTAAGGTAGGTAGTAA
TTTAAATTTGGTGTTGCTTTAAGGTATCACCTATTATTACTGTCTTGAAT
TATTTTTGACCTAAAGATTTTGTCATTGAATGTCATGTGTCTTATCAAGA
ATTGTCACCCCAAAATGAATATTTTGTCAGCCCTAGGGATATAATGTTAT
AgtaatttcccaaaaaatatttattaaaggATATCAATAGGATAGCGTAT
CTACTGGCATTTTGCATACACATCATTCTGACATCTAATCTAGCCTTATC
AAAACTGGCTGCTTAAAATACATCTTTTATCCATGTCGGTTGAAATGAAA
ACTCATGAAACTCCTTTTGTTATCACAGttcatggcttggcagcaggttt
taggtgacccctaagaattcaggtgacccctaagatttaggtaacccctg
gttgccaaatatttttggtgacccctaagccaatgacaagtcaatttttt
tcgaaaatccttctcaaaccaccaaacaaatacaacagttagtttaggtt
attgctaaatagaataaacGCCCTAAGAAATTAGAGGTAAGCTAAGTACT
GAAGGTTCATGCTagattatcaaggttttgtaagtcagAGTGCAGATCCC
TTGCCAGACAGatttttatctaagtaaatgcaaggggggctgaagtttag
tgacaccgcaaGGGCCAACCATGGCTTGGCCCaaggggaaaaattttgaa
aatttgagctctagattgcttgaaaatgcactcaaagcATGCACTTatag
acaattatgacaaatttaaaaagaaaaactttgcaaaataacccccttgc
ccccccccatgctacggcactgcagataatatattagataccaaattgtc
agtttttgagcattgcttagattaaaatataagatgagAAAGTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCTCA
GGCCAGGGGGGATTCCAGCCATGCAGTTCAAACATAATTTTTAACTAGAT
ACTTTCTAAGGCTGATTttattagttacacggtcttcttgaggtgggata
cgggatatacagggtcagtaaaaactTTATTGGTAACAAGACTTACCGAG
TCGCAATACAATTTTTACTGATCCCTAGCGCTACAAAGTAAATCGAAGTG
TGAAAGTGGGATCAGTGAAAGTGACATTTTAATCTCAAGAAAAGTAAAAT
CAGAATAACCTTAAGAATTTTCTGTTTGTTGACTTTCTCAACCCCAACCA
TTTCAATTtcgaaatttcattttcatttttaaacgaaACATTTGAAAGCG
CCTTCGCCAATATGCAatatcttctttcttttctcaATTGAATGCGAGTG
AGACAGGATACGTACCTCCATGTAatgtcttttgaccaatgaaatcgcta
gaatcttactgatgcggAATAACATTAAATATATTATTTCTTTTCAGGGG
CTTGATTACATGCACAAACAACATAAATTACATAGAGATATCAAAGGAGC
AAACATTTTGTTGACTTCTGAGGGTGATGTTAAACTAGGTATAAATCATT
ATagttattattttcaaaaggaTCACATAATATTAATTTAATAAATAACT
TTTAATGCTCTTTGTTTTTGTAAGAGTGATAAACACTGGGCCCTACATAA
AGAACGTTCATTTTTTTAGTTGTTAATTAAGTTGTTTTTCACCTATAGCT
GATTTTGGTGTTGGGGCTCAAATCACATCAACGATGGGAAAACGTAATTC
ATTCATCGGGACTCCTTATTGGTAAGATCAGATTTAGATTTTTTGATTAA
AATCACTCTTCTAAAAGTAAGTGttgtgattttgtgattttgtaaCTTCT
CAAAAACTTTGAGGCAACACCCAGGTTTCCCGAGATTTCTCTGCTTGTCT
TGATCCTTCTAGATCGCAATTATTAGGAAGATGTAAGACCCATTATCTCA
TAAATTAATGTTGAAATTCTCTTGTTGAAGTTCTCAACAGTTATTGTGTT
AAGGTCAATCTTTTGTGTCAATAAAAACTATTTGCTAAATAGCAGGAAAA
GccactaaaattaaaaaaggctAAGCTTTTTCTTAGTATCTGGGataatt
tgaaatgaattaaaagttatttttctgTGATATCATGACAGGATGGCACC
TGAAGTAGCAGCAGTTGAGAGAACAGGGGGATACGACCATCTGGTAGGTT
TTCATTTAATACTTAAGCTTTTGAGGCCTTGATgagttcttaaccttttt
taatttaaaagccttaaaatattctcaaaattgtttttcatttcagaCTC
TTGAGAGTATTTTGGTGTGAGTTCCTAAGAAATCAAACGTTTTAGGGTCT
TTGAAACCTTTGAAacaatttcttcaaattttttgaagccctATTCTTCA
TATACTTTGGTCTTGTTAATAATGTGAAGGGATCTAGATGCTCATTTCAT
GTTTTTGTTAGTCTTCTCATAAAATGATGcttcttaaatattttttaact
ttCAAAGTGTGATGTATGGGCAGTGGGGATAACAGCAATAGAACTGGCAG
AATGTCAACCACCACTATTTGAACTACATCCTATGCGGTATGTTTAAACA
ACAAAGCCAACCAAACCACCTGACTGAGAGGGGGTTACTTGGTTTGTGGG
ATGTCCGAGTcaaagttcaaattttcaaatattttcataaaatttttgaC
CCTTAGAGTAAAGTGGTCGAAATATTAAGATATCTACCGATTGGCCTAAA
TGCAATTTTTGgcgggatttaatttggtgatagatcaatttcataaaact
tggcggggatttaatttggcaaattggaaattttgaaacaaggaaacggg
tgaaaattactcaaaaatatactaaaaagttatggtctttcacataattc
tctttttgttaaatttggtggggatttaatttggcggggatttaatttgg
cgaattgccgaatttggaaattttggcgaggatttaatttcgtgaatttt
ggcaaaataatAAAGTTACATGAGAGCATGAGACTTTGCACAAAtgtagt
ttaggggtcaaaatttgatttaaatctcagacccaaaaaattggcaccac
tctgtttgtgtattttacagaccagaacaggTTCCCAGgcttaaattaat
tttttttctccaaagtatgccctgttacataccgttggaaagcatttttc
aagctcatttataaaaacattatatatgagaatgaagccaataaaagtta
ttaaATTGCTTAGTAATTGCTGACTGACAAAAATTCGAGCACTCTCTTTc
gacgagcacaaaaccgctatctaattcgaattctatcaaaagtggctgtt
ttttgtctccgctgaaaATTATATTGAGGCAGActttataacaaaataaa
ggTTATGATTATAGCAGAtattaaaacacttttttttgacacttttagGT
AAAGAAACTAAGTAATTAAGAACATCGTGAGAACATGATAAGCCTGATAT
ATtcagaaaattaagaacagcccagcctgagctgAAATTTACTGATTTTT
ATAAATGTATCTGGTTTGTTTCACTTTTATGTCATAATTGACTGGATGAC
CTATCTTATATCACTATTATTTTAGTAAATTCTTGTTATAGTGCACTGTA
TTTGATCTCCAAGAAAAACTATACACCACCCTCAGTAAAAGACAAAAGCA
AATGGTAATATAATATTACTATCATTAACATCATTGAGGTGTTTTCAAAG
GACAGTTAATTTCTTTTACNTTAGTGCACTGTATTTGATATCCAAGAAAA
ACTATACACCACCCTCAGTAAAAGACAAAAGCAAATGGTAATATAATATT
ACTATCATTAACATCATTGAGGTGTTTTCAAAGGACAGTTAATTTCTTTT
ACATGATTTtaatctgaaagttttttttcaggcCTAATATCCTATTTCCT
AGTCCAGTTCCAAATTACTAAGTAGTGTTCCAGGATTCTATATCAAATTA
ACCTCTCTCTTGTCTTTGTAGGAGCTCTTCTATGAGAGAATTCATCAAAC
TTTCGTTAACAAAAAATCCAAAGAAAAGACCAAGCTGTGAGAAACTACTG
CAGGTGGGGATTTTGATGTCTGCACAAACTTGTCTGACCTTGATAGAAAT
ATTACCAGTCAAGCTACAATTTCAATCTAGGTCcgaatagtgtttttttt
taaagttacacATTTGCCATCTGCACATGGAATTTTTCTAACTGGGATTT
ACATcctgttttttaagaaaaaaaagtcaACAATTATTCCAAAATTGGGT
TGGAGCCCTTTGCCAAAGTTGGTTATAGCACTTTTAATCAAAGACCGCCA
ATAATCTGCAATAATATTTAAACTTCACTCGGTATAACAATCTGTGATCT
TAAGAATCCTGTCTTTGTATACAGCATGCATACTGTCAATCACGTCAAGT
CAGGCGGGTACTGACAGAACTGCTTGACAAGTTTGATAAGTTGAAACAGC
AGAAGAAATATCGCTACAAAGAAGCCAACACTGATGAAGatagtgaagaa
gaaaatgaaaagaatgagaaaaaagaaaataaccaaAACAACGAAAATAA
GGTATAATTCACTGAGCTAAATAAACCCTGGGGAAAGTTTCTTGTAATCC
AAGctaggaaaatcttttaatCGGGTTTTTGTAGTGTACGCTAATGGCAC
CAATAGTAACATTATTCAAAAGCAGTGTATTGCATCGAGAGATGCTAGAT
TTACTTTTCATTGAATACTTGTTTTTTTGCCttgccctaaaaataagaac
agagtGTAACTGTAAGAACATTTTGatgctcaaagtgccaaaaaataaca
ACAGCTGAGCCTGAACAAAACTTTACTGGTTCTTAATGTCAATTcctttt
ctattgttctttaccaaatttcttaaaataaatACGAAAATTTCCCTGCA
GGATAAAAGAACAGTCAAACGGATCAAatctaaaaaagacaaaaacagaa
aagataAAGTCAATTGTAagtattttgacaattttctgaACTGTTATGTT
ACTACGTTACGTAGGAAATTATTATGTATCATTTGACATAACGACATTTG
ACAGAACATATACTCCACAGTATAGCTAACTCCTCATAGTTCCATTTGGG
CTTGTAACGCCTCCTAAGTTCCCCATTTCTCTGTTAGACGTTGTTTAGGT
TACACACtattatttattattgtttATGCACTAAATGTCTCCCTAAAGTT
GATGCGTCTTGGGATGTGGTAGGCTCTAACTATCTAGATTCTAGAAGatg
ttttttgaaatcttccAGAAGTAACTTGCCCTGACAGCCAAATTAAATTT
ActtgattttctgatttatttAGTACCGGACAAGGACATGCAGCCGGTAC
AAAGAGAAACGGAACCCGAACGGAAGGTACGATTTCCCTCGTTATTTCCC
TCTGGTATAGAACTTTTATACTGATGAGAAAAATTATATGCGTGTCTCTG
CCCAAAACGTCTGAGATTTCTATTTCTATCATGTCTAGTAGACTGTAGTC
GTTTATATAGTCCATGTAAAATAATAATACGGGTGTTATAATGATAAGAT
GATAGTTGCTATGGGTTGAATGAACTACAATTTGTTCCATCAatgatttt
ttgcttattttctgTTATGTCTAATCACTAAAATTGGTTTTTAAACAATT
AAACAGATTATTAACTAGCTGCCCGTGCTTCAACACCTCGAGCTGACTAA
TTACTTCCCTTCAGATCAACGTAATTTCACTTGCAAAGTGTACTGTCACA
TGATCATTGAGCATTCCATTTTTCATATGAAGGTGGCGTTGACACCAACT
ACGTTTCTACTACAGTTTATATAGAGTAACTCCTAACttgattttatttg
ttttcaattttcaggcCACGATAAAAGCCAAACCACCTCCACCTGTTCCA
ACACACaggttttttcttcttctttccatcataatttttttatatcgaca
atatattgaaaaggtgtccgNTTTCTTTCcatcacaatttttttatattg
gAGAATTTcataagggctacatacactacacaatatattgtcaggcaata
tattgatgatatattgctgaatgtcgacaatatattgaaaaggtgtccgc
aatatattgtcagctcgatttgcaatattccaacaataaagggggattgt
ttacagaaagaaaattcctttttataatagagtataccagttgtttactt
cgtacattacggtccgcaaaccatattgtcgaatattgttcgtcaatata
ttgtgtagtctaagtagccctatAGGATAACGCAGACAGAACAATACAAA
TTTAATTGATTTGAGTTTTGGTCCTTATTTATTAGATCTATAATAGATTT
AGATGACGATTGTAGAAATTGACTCTAAAACTTATACTAAAGAGCGTCTA
CCACAACAGAAAGTTTTCGTTTTGCATACAACTTAAttaattttgtttca
aatttctttttagcTCTGAAGGACCACCAACGTTGACCGAAGCACCAAAA
AGAAACCTTCCACCACCACCTCCTTCACCTAAACAACGATCAAGCTCGGT
AAACTACTACTGAATCAATGATCTTAGCTCTCGATCTGGCCACTTTGCTA
CAGTCGACGCTTTTTTTTAtccgataatattgaaagtcaccatcaagaaa
aaaactcataaacgacgccaattttccttgaaaactaGACCAGAAAGCGT
CAACTTTAATTGAATGCTAACTCGGcactgagctttatataaacCTTGCA
GGAAGTTTCTTAATTTCGGCCAACCAAAATCTCGATCTAAGTTTTTCGAA
AGTGGTACTAGCGTTGTATATGCATCGAGAGTGCTAGTCTACTTTTCCTT
GAACACTTTTAATGATGTGGCGCCGTTAGACGTTGAATCTTTTATACTGc
catggcttctttgcgggtatcATACGATTAAGATGATAACGTGCCTTCGT
ATGCCTCTAAGCTCTTATTTAGACAACAGAGTTTTGTATGAGCTCCTTTA
ATGtaagagaaaaaatgaagagATTGAGCACTCCCTTTGTTTTTCAAGTT
TAATGAGAACAgaactgtttggaaaatgtaaaacctttttttgtCTGTAA
GAAGTTTAGGCAGAGATGAAACCGCATTTAAaagtaatgaaaaataaatc
agcCAATAAAAAACTCATTCAAACTTGAAATAAACCACAGCAGTTTAtta
aatcttttggtttttaagaagggtgtttattcgagggggttTTTAAAAGA
AGGTGGGTTTTTCGAAGTAATTTGGTATGAGGACAGTTATATAAACTCTG
AACTcatcaatttcaaattcaaatttttttatagaatGGTGCTGCTGCTC
GATCTTCTCCCAGTCCACCGCCTCCCCTCCCACCACGCCCACCAGCAAAT
TCAACGCCATCAGATGACATGCCCACCATCAAAGCGCCCTCACAAGGAAA
AGGAGCCGCCCCACCACCACCTTTACCGCCAAGAGTTCCTACCGTGCACA
AGAGGGAAAGGGTAAGATTTGTTATAGTTTTTTTAGTATGCACACTTTTC
GTAGAAATTTTGTGGCttatattgggctcttccagaaaaaaatccgtCAT
GGGGGAGGGGTGGATGATGAATGGTCCCAAAAAAAGTCCTAAAATTTGCA
TTGTCAAGGGTGTAAATCTGAGATGTCCGGGGGTAAACTTTGGTGTCCTT
AAATTGATGATTGCCGATTGGTATAACCCATGTTCATGGGGTGAAAAATG
GAAATGTTCAGGGCTAAAGCATTGAAAAATAATACAtccattttttttgc
aaagattGACGAAACTGAAGTTTTCTTCGCCATCAATATCATACCAAATT
CAAATTcgtctatttttcatttttcttagcCTCCATCACAGCTATTCACA
CAAAGGGCTACGGTATGTTATATCTAGATGATTGTTTTAGTTTCTTAATT
TCTTTGATCAATACAAGAAAAAAATAGACAATCGCTATCAAAAAAATGAA
TAGCCATAAGAATTTGAATCAAATTACAATATTCATTCTCATTTTTCTAT
CATAAGTAGAAAAATCGCTAATAACGATATCCTAACTAACGACTCCTACC
ATTTCCTATCAGTGTTTGTAACTTCGTGATTTCATGTTTTCATATTTCAG
GCGAATtgcttttcaaagattttcaacgAATGTCCATTAAATATCTCTGC
CGCTACCAGTTGGACGCATCCAGAAACTAAAAGTAAGCTTGTCAATCGTC
TAAAAAGTCACTAGATCTTTAGGAAACTGTTTAATGAAGACTTCACTCTA
TTTGATTTACTTGATTGGGCATCCTCTCTGAAGCGTGTCTCGTGAGCAAG
AAATCGGCCTGTTGTTCCCATTATAAAAGTGTCGGCATTCAGGGATTGAA
AGCTGACGTTCGAAAATCAAATGTAACTAATTCTACAAGCAATCTGGANT
GGCttatattgggctcttccagaaaaaaatccgtCATGGGGGAGGGGTGG
ATGATGAATGGTCCCAAAAAAAGTCCTAAAATTTGCATTGTCAAGGGTGT
AAATCTGAGATGTCCGGGGGTAAACTTTGGTGTCCTTAAATTGATGATTG
CCGATTGGTATAACCCATGTTCATGGGGTGAAAAATGGAAATGTTCAGGG
GTAAAGCATTGAAAAATAATACAtccattttttttgcaaagattGACGAA
ACTGAAGTTTTCTTCGCCATCAATATCATACCAAATTCAAATTcgtctat
ttttcatttttcttagcCTCCATCACAGCTATTCACACAAAGGGCTACGG
TATGTTATATCTAGATGATTGTTTTAGTTTCTTAATTTCTTTGATCAATA
CAAGAAAAAAATAGACAATCGCTATCAAAAAAATGAATAGCCATAAGAAT
TTGAATCAAATTACAATATTCATTCTCATTTTTCTATCATAAGTAGAAAA
ATCGCTAATAACGATATCCTAACTAACGACTCCTACCATTTCCTATCAGT
GTTTGTAACTTCGTGATTTCATGTTTTCATATTTCAGGCGAATtgctttt
caaagattttcaacgAATGTCCATTAAATATCTCTGCCGCTACCAGTTGG
ACGCATCCAGAAACTAAAAGTAAGCTTGTCAATCGTCTAAAAAGTCACTA
GATCTTTAGGAAACTGTTTAATGAAGACTTCACTCTATTTGATTTACTTG
ATTGGGCATCCTCTCTGAAGCGTGTCTCGTGAGCAAGAAATCGGCCTGTT
GTTCCCATTATAAAAGTGTCGGCATTCAGGGATTGAAAGCTGACGTTCGA
AAATCAAATGTAACTAATTCTACAAGCAATCTGGAGAAACACTCAGAAGA
AAGATTATCATTGCGTTTAAGTCTAAGGAGTTAGCGTTGTGGAGCAATCC
AAGGATAAAGCTACAAAGCTTTCGAAAGATGAGCCTTGGGGTCGCCTCCG
AAGACTTATTGCAGACTTCTACAAGCCTATAGGTTACCTACTTCGTGTGT
AGATTAGTTGGATGGATTAttgttgttaatttttttagcTCTACGCCTCT
CTCTTTTCAGATCATCATTTATTGTTTGCATCAAACGAAGGGATTTACAG
CCTCAATTTGGATGATCTGCAAAATATAGAAATGTTTCAGGTGTGTTTTT
CTTCTGTTTGCAGTCTGTAGTAGATAGCCATCTTCAaatatgattttaaa
attttatgtacGACCCAAGACCTTGGGCACCGTTTTACGGTTtttaattt
catgttttatcTTTACCGTAGATTTTTTCACGGCCATGCAGTTGGGTGTA
CGTCATCAAGAATATATTGGTATCCATCTGTGGCTCTCCTGCACACGTCT
ACATGCACAATTTGTTGTCGCTTCATGGTCAGCAAAACATTGAACAGTTT
TTACCAGTACCAAAGTAAGTTTAATAGTTGGTTCAGA

Coding sequence (CDS) from alignment at scaffold_63:182722..197258+

>TCONS_00071635 ID=TCONS_00071635|Name=TCONS_00071635|organism=Clytia hemisphaerica|type=CDS|length=1773bp|location=Sequence derived from alignment at scaffold_63:182722..197258+ (Clytia hemisphaerica)
aatcgaactgcaattgcttcaaaaattaaAAGGATGGCTGatataaagaa
aacaaaaccaGAGAAGGATATTGAGTTGATTCAAAGGATTGGAAGTGGAA
CTTATGGTGAAGTCTACAAGgcAAGATGGAAAGCTACAGGGGAAATGGCT
GCTGTGAAAATTATAAATATTGAGCCAGGTGATGATTTTGATATCATACA
gcaagaaataaaaattatggAAGAATGTAAACATTTCAATATTGTTCAAT
ACTTTGGAAGCTATTTACGGAGGGATAAGTTATGGATCGCTATGGAGTTT
TGTGGTGGTGGCTCTTTGCAAGATATTTAccatgTTACTGGTCCACTCAA
CGAGCCTCAGATTGGAGCAGTATGCACGGAAATGCTTAAGGGGCTTGATT
ACATGCACAAACAACATAAATTACATAGAGATATCAAAGGAGCAAACATT
TTGTTGACTTCTGAGGGTGATGTTAAACTAGCTGATTTTGGTGTTGGGGC
TCAAATCACATCAACGATGGGAAAACGTAATTCATTCATCGGGACTCCTT
ATTGGATGGCACCTGAAGTAGCAGCAGTTGAGAGAACAGGGGGATACGAC
CATCTGTGTGATGTATGGGCAGTGGGGATAACAGCAATAGAACTGGCAGA
ATGTCAACCACCACTATTTGAACTACATCCTATGCGTGCACTGTATTTGA
TATCCAAGAAAAACTATACACCACCCTCAGTAAAAGACAAAAGCAAATGG
AGCTCTTCTATGAGAGAATTCATCAAACTTTCGTTAACAAAAAATCCAAA
GAAAAGACCAAGCTGTGAGAAACTACTGCAGCATGCATACTGTCAATCAC
GTCAAGTCAGGCGGGTACTGACAGAACTGCTTGACAAGTTTGATAAGTTG
AAACAGCAGAAGAAATATCGCTACAAAGAAGCCAACACTGATGAAGatag
tgaagaagaaaatgaaaagaatgagaaaaaagaaaataaccaaAACAACG
AAAATAAGGATAAAAGAACAGTCAAACGGATCAAatctaaaaaagacaaa
aacagaaaagataAAGTCAATTTACCGGACAAGGACATGCAGCCGGTACA
AAGAGAAACGGAACCCGAACGGAAGgcCACGATAAAAGCCAAACCACCTC
CACCTGTTCCAACACACagcTCTGAAGGACCACCAACGTTGACCGAAGCA
CCAAAAAGAAACCTTCCACCACCACCTCCTTCACCTAAACAACGATCAAG
CTCGaatGGTGCTGCTGCTCGATCTTCTCCCAGTCCACCGCCTCCCCTCC
CACCACGCCCACCAGCAAATTCAACGCCATCAGATGACATGCCCACCATC
AAAGCGCCCTCACAAGGAAAAGGAGCCGCCCCACCACCACCTTTACCGCC
AAGAGTTCCTACCGTGCACAAGAGGGAAAGGcCTCCATCACAGCTATTCA
CACAAAGGGCTACGGCGAATtgcttttcaaagattttcaacgAATGTCCA
TTAAATATCTCTGCCGCTACCAGTTGGACGCATCCAGAAACTAAAAATCA
TCATTTATTGTTTGCATCAAACGAAGGGATTTACAGCCTCAATTTGGATG
ATCTGCAAAATATAGAAATGTTTCAGATTTTTTCACGGCCATGCAGTTGG
GTGTACGTCATCAAGAATATATTGGTATCCATCTGTGGCTCTCCTGCACA
CGTCTACATGCACAATTTGTTGTCGCTTCATGGTCAGCAAAACATTGAAC
AGTTTTTACCAGTACCAAAGTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_044513	XLOC_044513	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00071635-protein	TCONS_00071635-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_63	supercontig	scaffold_63:182722..197258 +

Expression

No biomaterial libraries express this feature.

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000719	Prot_kinase_dom
IPR001180	CNH_dom
IPR021160	MAPKKKK
IPR017441	Protein_kinase_ATP_BS
IPR011009	Kinase-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004672	protein kinase activity
GO:0005524	ATP binding
GO:0008349	MAP kinase kinase kinase kinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008349	MAP kinase kinase kinase kinase activity
molecular_function	GO:0004672	protein kinase activity

Blast

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BLAST of TCONS_00071635 vs. Swiss-Prot (Human)
Match: M4K5 (Mitogen-activated protein kinase kinase kinase kinase 5 OS=Homo sapiens GN=MAP4K5 PE=1 SV=1)

HSP 1 Score: 423.705 bits (1088), Expect = 5.170e-137
Identity = 191/282 (67.73%), Postives = 233/282 (82.62%), Query Frame = 3

Query:   27 IKRMADIKKTKPEKDIELIQRIGSGTYGEVYKARWKATGEMAAVKIINIEPGDDFDIIQQEIKIMEECKHFNIVQYFGSYLRRDKLWIAMEFCGGGSLQDIYHVTGPLNEPQIGAVCTEMLKGLDYMHKQHKLHRDIKGANILLTSEGDVKLADFGVGAQITSTMGKRNSFIGTPYWMAPEVAAVERTGGYDHLCDVWAVGITAIELAECQPPLFELHPMRALYLISKKNYTPPSVKDKSKWSSSMREFIKLSLTKNPKKRPSCEKLLQHAYCQSRQVRRVL 872
            ++  ADI +  P++D EL+QR+GSGTYG+VYKAR   TGE+AAVKII +EPGDDF +IQQEI +++ECKH NIV YFGSYL R+KLWI ME+CGGGSLQDIYHVTGPL+E QI  VC E L+GL Y+H + K+HRDIKGANILLT  GDVKLADFGV A+IT+T+ KR SFIGTPYWMAPEVAAVE+ GGY+ LCD+WAVGITAIEL E QPP+F+LHPMRAL+L+SK N+ PP +KDK+KWSS+   F+K++LTKNPKKRP+ E+LL H +     + R L
Sbjct:    5 LRPAADILRRNPQQDYELVQRVGSGTYGDVYKARNVHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHTKGKMHRDIKGANILLTDHGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELGELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKIALTKNPKKRPTAERLLTHTFVAQPGLSRAL 286

HSP 2 Score: 104.375 bits (259), Expect = 3.710e-23
Identity = 43/87 (49.43%), Postives = 64/87 (73.56%), Query Frame = 3

Query: 1473 CFSKIFNECPLNISAATSWTHPETKNHHLLFASNEGIYSLNLDDLQNIEMFQIFSRPCSWVYVIKNILVSIC-GSPAHVYMHNLLSL 1730
            CFSK+F+ CPL I+ ATSW HP+TK+ +++F + +GIY+LNL++L    M Q+F R C+W+YVI N L+S+  G    +Y HNL++L
Sbjct:  497 CFSKVFDGCPLKINCATSWIHPDTKDQYIIFGTEDGIYTLNLNELHEATMEQLFPRKCTWLYVINNTLMSLSEGKTFQLYSHNLIAL 583

The following BLAST results are available for this feature:

BLAST of TCONS_00071635 vs. Swiss-Prot (Human)

BLAST of TCONS_00071635 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
M4K5	5.170e-137	67.73	Mitogen-activated protein kinase kinase kinase kin...	[more]

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TCONS_00071635 (transcript) - C. hemisphaerica