TCONS_00071675 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071675
Unique NameTCONS_00071675
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5001

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071675 ID=TCONS_00071675|Name=TCONS_00071675|organism=Clytia hemisphaerica|type=transcript|length=5001bp
TCTAGGAcacaaaaattatgaaaaattaatcAATGTAGGCTTTttccaca
aaaaaacaaaaattacacacatttcgaAGACAATGCGAAAATTGTACTTA
TTAGCTTTCCTGTTATTGTCAACGAACCTCCTACTAACAGAGGCGTTTCT
ATGGCGACATCTATTCGCCAATCACATCAGAAAGAATGATACGGTCCATG
CAAGGGACACCGCTATTGGGTCATCAGATTTGACCACCATTCATGAAAAT
GCAGAAGtgcgtgcgaaaacgaaagatgaGCCGCCCATTTTGGGTGAAGA
CAATAatcaaatgGTTCCTTCACTTCCATTGAACATTTACAAAGAGCTTC
GAAACGAAGAAGAACTTGGTCGTGAATTACGAGACAAGTACGTTGAAGGC
GATATTAAACTAGATGACAATACGAAACGAATTCGTGCACGTAATGATCC
ATCAAAGAATTACAAGTCAATTCCTGAATTAAAATGGGGATCAAAAGAAA
TCCCTTATGATTTGAACGGTGATATCACTGATAACAAAAGAAAAGCCATC
GAGGCAGCTATTGCAGATCTACAAAAATACACATGTTTACGTTTCATCAG
TCGTAAAAGTGCTAAAGATTACATTCATTTTCAGAAGAACCTCAATGACA
ATGAAAAAGGGTGTTTTTCAGATATAGGCCGGCAAGGAGGTAAACAAGTA
CTTCGTATTGGAAGCGGTTGCGGATTCAAAGGAACTGTACTTCATATGAT
TATGTTAAGTCTTGGATTTCCTCATATACATACCAGCTTCGACCGTGACC
AGTACATCAAAGTCCTCATTAATGACGTTAAAAAAAAGAATCGGAGAGAT
TTTGATCAATACTCACACAACATTGTTACAGATGAGACTTTTCCGTACGA
CGAAGCCTCTGTATTACACGTTGGTTATCGCTTCATGGGTGACAGTAGAA
TGGTAGGACCAAACAAGATCACCATAGAAACCAAACGATACAAAGATGCT
GGCAAACTTGGACAACGGAAAGGTCTTTCACCAATTGAtgtccaaaaaat
caaaaaagtttatTGCGAAGATATTCCAGAAACCACTACCACCACAGCCG
CACCACCGCCTGATGTTCCTGAGAAGAAACCAGCCGATGAAAAACCACCA
GCACCGGAAAAACCGAAACCTGATGATGTTCCTGCCGAAGAACCACCAAA
AGAGAAACCCAAAAAACCGGTGGGCGACGAGCCACCCCCAGAAGCACCGA
AACCTGAAATCGAAGCACCTGAGGCACCTGCTAAACCACCACCAAAGGTG
GCtgaagatgacgtcatcaaaccaGAAGATATTCCAGCACCAACCACAAC
CACGACTCCCGCTACTACCACTAGTACCACTAGCACTCAAGCACCTCCAG
ACGGTATCCCAGAAAAAGCAGAAGATAAACTACCAGAGCCTGAGAAGCCA
AAACCAGACGATGTTCCTGATGCTAAACCACCAAAAGAACCAGAAAAACC
AGCACCACCACCAGCCGATGAACCTCCTCCAGAAGCTCCCGTCCCTGAAA
TCGAAGCACCAGAGGCACCACCTAAAGAAGCACCACCAGTTAGTGCCGAA
GACCAAGAAGTGAACCNGTCCCTGAAATCGAAGCACCAGAGGCACCACCT
AAAGAAGCACCACCAGTTAGTGCAGAAGACCAAGAAGTGAACCCTGGTGA
CATCGTTCCCACAACAACTACTTCGACAACCACAACAACCACGGAAGCAC
CGACCACAACAACTACGACCACTACGCCAACAACGACGACGACGACAACA
ACTCCAACAACGACGACGACGACAACAACTCCAACAACGACGACAAGtac
aacaacaaccactacCACCACGACAACCGAAGAANCCTGGTGACATCGTT
CCCACAACAACTACTTCGACAACCACAACAACCACGGAAGCACCGACCAC
AACAACTACGACCACTACGCCAACAACAACGACGACGACAACAACTCCAA
CAACGACGACGACAACAACAACTCCAACAACGACGACAAGtacaacaaca
accactacCACCACGACAACCGAAGAGCCGACTACGACAACTACGACAAC
AACAACTGAGGAGCCAACGACGACAACAACAACCACGACAACCGAGGAGC
CGACAACAACCACGACAACAGAAGAGCcgacaacaacaacgacaactGAG
GAACCGACTACAACTACTACATCAACTACTACCACCACGACAACACCAGC
TCCTGAAGAAGAAAATGCTCCAGAAGAGGATCAAAATAAACCACCTGAAG
ATAACCCTGAAGGTGCAGGAGATAAACCCCCAGAGGAAAACCCTGATAAT
GATGGAGATAAAGCTGGGGGAGAAGGTGACAAAACGAAAGATGATGGTGA
TAAACCAACTGATGGAGATAAATCAGCTGATGGCGATAAGCCAGCTGATG
GTGATAAACCAGCTGATGGAGATAAGCCAGCTGACGGAGATAAACCAGGT
GATGGAGATAAACCAGGCGATGGAGATAAACCCGCTGATGGAGATAAACC
CGCTGATGGAGATAAACCAGCTGATGGAGATAAGCCAGCTGATGGAGATA
AACCATCTGATGGAGATAAACCAGCTGATGGAGATAAGCCAGCTGATGGA
GATAAACCCGCTGATGGTGATAAACCAGCCGATGGCGATAAGCCAGCTGA
TGGCGATAAACCATCTGATGGAGATAAACCAGGTGATGGAGATAAACCCG
GTGATGGAGATAAACCAGCTGATGGAGATAAACCAGCTGATGGAGATAAA
CCTGGAGATAAACCTGGAGATAAAccagatgaaaataaaaaaccaGGAGA
CGTTTTGCAGCAGCCAGGAGATGATACCAATCCACTAGGGGATGATACCA
ATCCACTGGGGGATGAAATGAAGCCTGCTGAGGATGGGGCAGAAAAACCG
AAACCAGAAGATGGAAAGAAACCCGAGGATGGAAAGAATCCCGAAGATGA
TAAAAAACCAGATCAAAAACTTCCTGAGAACTTAGATCAGCCACCACCAG
GAGATGTTTTGAAAGTTCCCGGAAATGATGATAAACCATTAGGAGACAAA
CCAACAGAGGAAGATAAACAGGATGCTAAACCTTCCGAGGGAGGACCTCC
AGGGGAAGATGGTCAGCCACCTCCTGAAGCCGGACAAGCTCCTCCTGAAA
ACGCTAAACCAGGTGACAGTGATGGAGACAAACCATCTGATGCTGATGGA
CAAAAGCCTCCAGGAGACAACCCAGATGGTAATGGTCCCCCAGGTGCTGA
TGGGAAACCTCCTGCCCCAGGAGATGATGGACAACCTGCTCCAGGAGCTG
ATGGACAACCTGCCCCAGGAGCAGACGGACAGCCTGCTCCAGATGCTGAT
GGAAAACCTGCCCCAGGAGCTGATGGAAAACCTGAACAAAGTTACGACAG
TTTGATAAATCAACCAACAACAACCACGACTACACCATTATCTTTTGTGG
TGGAATCAGATGAACCAATCACCACGACCACTACACCACCACCACCTTGC
AGTGTTGAAACAACTGTTGATTGTAATGGACAACCACAGCAACCTCAACA
ACAACCTGTACAACCCCAACAATGTGATGGCCAAACGCCATGTTATCCAC
AAGATTGGTATTGGAGTAACCAAGGAGCTGCACAGCAATGTGGTTGTCAA
CAGCAACCACAGCAAACACAACCACAACCATCACAATCAAATGCTCATGA
CAGAGATTCCATTGAAACTCCACAATGTGATTCTTGTGAATGTGTTAGCA
TACATCCCAGTCAACATCAGGATACatggaaaaataatttcttgtgTGCT
AAAAAGACACAATTTTCACCAAAactagaattttcaaaatctggtCCAGT
TGAGGGTAAGAATTGTTTGAAAATGTCCGATTCAGAGGAATGGAAGGATT
CATACATTTGTACAGATCAAGAAACAGCATATAATTTCATGTGGTCTGAT
AGAGAGGGTGAATCATGTCTTAAGATCAAGGAGCCTCATGATTGGGAATG
GAAAACCAAATATTTATGCAATAACAATAACAAAGAAAACAGAAGATGAT
AAATTGGAAAGAATAGACTTTTTTATTGAAGATTATTGACTTCTGAACAC
TGGATTGCACTTTTTGAGGAGCTTAACAACGcgaatattaagctttaaat
cTGTGTGATAGCATCGATGTTTACACCTTTGGAGAGGTAAAATCCAAATT
CAACTAGAGTTATTGATACTTGCATTTAAATCCTTTTGAGAATCTAGATA
AGAAACTTAGAAATTACTAGGTACAAAATTTAGGCTCGGTTGGTCTCCAT
AGAAATTCTTTTGACCTAAAATTAACAGCAAACTTTTCTCTATTCAGCTG
TTTTAGAAAGTCTTGAAACTACACGAGTCTTCAAATTTTAGTGCCTGAGT
AATTTTTGAGTATTCACAAATTTGAGGGCAAAGCTTTTTCACACTCCTGT
GTCTCAGACCCGTTGGGACCCCAGccacactggaaaattgactttgattt
catctccattcgaaattccatgtttaaaaattgcactcaaaaaccatccc
cactggcttttttaaccttggaacagtagaatttctatcccaattggtat
ttcaataggaatttttatacCCACAGAGGAAAAAGAttcaccagggctgt
gagacaggggtgttaaggGGGTGTCAAGATAATGTCAAAATTATTTACGC
AATTAAAATGTATGATTTTTTGTCGAAGTTAAGTTGAATTAGCTAAACTA
CAATAACATATTTTAATATAATCATATTgatttgtaaaaataatttaatt
aaacaattataaaaatgtaatatttttgtaaaaaaaataatttgataaat
TCTTACTTTAACTTAATGAGGTATAATAAGTAAGTAAAATTAATTCTACA
TTCAACTAATTAAACTCACACCCAAAGAAAATACTCCAGCGTCACAAACC
C
Run BLAST on NCBI

protein sequence of TCONS_00071675-protein

>TCONS_00071675-protein ID=TCONS_00071675-protein|Name=TCONS_00071675-protein|organism=Clytia hemisphaerica|type=polypeptide|length=562bp
LGHKNYEKLINVGFFHKKTKITHISKTMRKLYLLAFLLLSTNLLLTEAFL
WRHLFANHIRKNDTVHARDTAIGSSDLTTIHENAEVRAKTKDEPPILGED
NNQMVPSLPLNIYKELRNEEELGRELRDKYVEGDIKLDDNTKRIRARNDP
SKNYKSIPELKWGSKEIPYDLNGDITDNKRKAIEAAIADLQKYTCLRFIS
RKSAKDYIHFQKNLNDNEKGCFSDIGRQGGKQVLRIGSGCGFKGTVLHMI
MLSLGFPHIHTSFDRDQYIKVLINDVKKKNRRDFDQYSHNIVTDETFPYD
EASVLHVGYRFMGDSRMVGPNKITIETKRYKDAGKLGQRKGLSPIDVQKI
KKVYCEDIPETTTTTAAPPPDVPEKKPADEKPPAPEKPKPDDVPAEEPPK
EKPKKPVGDEPPPEAPKPEIEAPEAPAKPPPKVAEDDVIKPEDIPAPTTT
TTPATTTSTTSTQAPPDGIPEKAEDKLPEPEKPKPDDVPDAKPPKEPEKP
APPPADEPPPEAPVPEIEAPEAPPKEAPPVSAEDQEVNXSLKSKHQRHHL
KKHHQLVQKTKK
Run BLAST on NCBI

transcript from alignment at scaffold_63:716721..730868+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071675 ID=TCONS_00071675|Name=TCONS_00071675|organism=Clytia hemisphaerica|type=transcript|length=14148bp|location=Sequence derived from alignment at scaffold_63:716721..730868+ (Clytia hemisphaerica)
TCTAGGAcacaaaaattatgaaaaattaatcAATGTAGGCTTTttccaca
aaaaaacaaaaattacacacatttcgaAGACAATGCGAAAATTGTACTTA
TTAGCTTTCCTGTTATTGTCAACGAACCTCCTACTAACAGAGGCGTTTCT
ATGGCGANCTTATTAGCTTTCCTGTTATTGTCGACGAACCTCCTACTAAC
AGAGGCGTTTCTATGGCGACATCTATTCGCCAATCACATCAGAAAGAATG
ATACGGTCCATGCAAGGGACACCGCTATTGGGTCATCAGATTTGACCACC
ATTCATGAAAATGCAGAAGtgcgtgcgaaaacgaaagatgaGCCGCCCAT
TTTGGGTGAAGACAATAGtaagttttctaaattttctatatCAATATTCT
AAAAGTTATCTTccattaaaaaactaaaaagtacaTTACTTAGAGTTCCG
TGCTTACGCACATCATATGTGCagtaatgattgaaaaaaatttgaagtga
tgtactttttagttttttagtggaagataacttttaaaatattatgGCAT
TGATTTACATTTACacttgttttgaattttcgaTATACGCTGTCTTGTTC
GATTTTCACCGGGGAATTTGAATCATAGAGCGTCGTTTAAATGGGACTAT
TTTGTGATATTTGATGTCAAAAAGAGTACAGAATGGATGCTTTTCTTATC
TTAGCACTTTAAGTACCACGGTCCTTTTTGGAACCGTTTTTTttggtcct
ataaattaacccgtgttcgttaatTAGTTCGTTagtacgttagttaccaa
cttttctcgagattggctcattcaatttttctgattttttgcacaaaggt
gcattactataaaccctcgaatgtgaNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNccaatagatatataaatcgaaatt
taaaattatacattacttccattaaattctaattattcgttttataaata
ggtaggtccattaaagtattacttgttttcttctaagttttttttaagaa
aaccgcttgttcaaactttaaaggcttatatctccggatctattgcactt
tttttgactttaaaatctTGCTGGAAAGaatcacttttgattttgttttt
tctgcttgaccatgaagccaaatccaattcctacgagttagacctaAAAC
GACGATTTCTAACTGCCCAGCATTACAGGAGGTTTTCGCCCTCCTATGTA
GCTCATGTCCGATATAcccgacattggcacttaaagggtccaaagtctga
ttttctcaaGTTGCGTTGACTTAAAAGGCCTCTTTATCTTTTTCGACTGC
TACAAATAGAGGGGGGTTAAATATTGAGATACGAATTcttcttttctaga
tcaaatgGTTCCTTCACTTCCATTGAACATTTACAAAGAGCTTCGAAACG
AAGAAGAACGTAAGTGTCATtatcattttgctttgtttgtCGAAATTATC
ATCAATCAAAGTGTCTCCATGATATTTTGAGATAGATCTgcaactatttt
tttttttttgggggggggttgGGGAGGTGTCGAAAGACGATCGGCTGTAA
AAGACGCCTCAGATTGCTAATTTTGGCGCCCTTTGCTTTTTTACACACTA
aaataaacagtttttcaatataaaagaaaacaaatatcCACAAAGATTTC
GTACTCGCTTTGGTTCCGTAATTATACCCCAAATTTGCCCCAGTTTCGGC
CAGCCCACCATGCTAATGTCTACTGACTGAAGCTAGCTCAAGTGATAAAA
AACAATATTAACTGATATGGATTAGCTACAGGTGCAACCTACAGTTTGAT
AGACGATATTCATCCAGCATCCCAAATAGCCCAAAGGGTATTagtcagta
gcgtagacaggggtgaagaCGATCTGCGTAGGAGAGCAGGTTTTTACGAC
AAAGCACTTATCTATTCGTGGTATAAAAACATTATCACTGTATCTtttaa
atctgctctcctacgcaAATGTTCTTTCACCCCTATCTACACTACTGGGC
CGGATATTGCCATTTCATTTTTCTGATCAAATGTAAATTATCGATGAAAA
ATTTCAGTTGGTCGTGAATTACGAGACAAGTACGTTGAAGGCGATATTAA
ACTAGATGACAATACGAAACGAATTCGTGCACGTAATGATCCATCAAAGA
ATTACAAGTCAATTCCTGAATTAAAATGGGGATCAAAAGAAATCCCTTAT
GATTTGAACGGTGATATCAGTAAGTTAtagatttttatttgatttgatct
CATGGGGTTTAAATCCTGGGGGGATTGGAGTCGGCGAATGTCGGATATGT
GCGGGTCGGACCTCCAAAATCTGACACAGATACTATTTTTCTTTGTGAAA
AGGTGACCAAGATGACGATTTTCATGTTTGTACAGGCCGTGGGTttgtcc
gagccaaaaattgaaaattacagaaagtaacttttaacATTTTGCTCCAA
ATTTTGGTctatatcaaattcaaaatttcaaaattttgcaatttagaATA
CAAAAATAGTGTGTGATCTGTCTACTACGTTGATATATGTCATATATTAT
CAATATGAAATCTGTTTCTGAGGCTCGAAAAACAGACCATAATGGTCGAC
GGTGGCTTATttctatgatttttttataaaaacatttttgaagtcttcgg
atattcttaaatttttagttttagcctaaaattgtttttattttcaccac
tttgtgagtatttttgtctgttttcttaagaaatcgggtgttttagagtt
tccTAGGCCTTAAAATGTTAACTTGTtctaatattttggtcatcgaagcc
ttatgttcttataaagtttgttcttataaaaaaacgtgtaaccctAGTTA
TTCACCTTTTCTTTACAGCTGATAACAAAAGAAAAGCCATCGAGGCAGCT
ATTGCAGATCTACAAAAATACANCCCTAGTTATTCACCTTTTTTTTACAG
CTGATAACAAAAGAAAAGCCATCGAGGCAGCTATTGCAGATCTACAAAAA
TACACATGTTTACGTTTCATCAGTCGTAAAAGTGCTAAAGATTACATTCA
TTTTCAGAAGAACCTCAATGACAATGAAAAAGGGtaaagtccattcgctt
taagtgtaCACTAAAGTTTATTTTGCTTGTTATTTttcttaagggaacta
attttggcgggaactaattttggcgaattcggTGACAAAGATTCgccaaa
aattagttcccgccaaaattaaatNATAtatgacgtacgtggtacgtctc
tcggcgtcTAAAggttaagggaacttattttggcgggaactaattttgct
CACTCGTTAAAATAAGTTCTcgctaaaattaaattttttggtattttgcc
taaataatttcttgagttcacaaaaaaagcttcaaataaggaaaaaatag
aacagatttacgctgtcattcgccgaagtaaagttctcgccaaaattaag
aattttcaggatttttaccGCTCGTCAAAATGAGTTCCatccaaaataag
ttcccttagggaaaacaaattatacacataatctaatttttgagaaaaat
ttttcgcccAAAATTATAGTGCTCTTCTAGTACCCCCACAACATTAACAT
AAATATCCTTAGAAAAAATTCAAGGCAACCGATCCTTCTTCTTGTAGGTG
TTTTTCAGATATAGGCCGGCAAGGAGGTAAACAAGTACTTCGTATTGGAA
GCGGTTGCGGATTCAAAGGAACTGTACTTCATATGATTATGTTAAGTCTT
GGATTTCCTCATATACATACCAGCTTCGACCGTAAGCACACGTTTATTAA
GCAGTTTTTTgtgctttttatttttgatattctgCATTTGAACTTTGGGA
ATACACACGTCAACGATCTCttagtctgtacacagacctgatatctacgg
ctaatttcaaaattcattgccgtagaggtaTTGCCGTATTACGAAATGAT
AAACACGAGGTCTCTGTGTTGGCCTACAGCCTCAAGCTTTATATATGTAC
ATCGTTGTCGGACTAAGTTAATGTAGCCCTTAAAGTAAACAAAGCAATGA
GATAAGTGGTTATAGATATATGTAGTAAGAAAGCAAAATAATGTCTTCTC
CTGTCAGAACTACAAACCTACATAAGAATGACCGAATCTTACCGTGAGAA
GATGGCATATCTTCTCTGGGTCCCTCTGACTTTTATCCCAGGCTGGCAGG
TCAAGGACCTCTGGAATAAAATGTTTAATTAGAAATTTGATTCATTTTCA
GGTGACCAGTACATCAAAGTCCTCATTAATGACGTTAAAAAAAGTAAGTA
TTCATTTTTGTAAAACGAGCTATTCAATTCTAACGGATGTAACTTTTTTA
TCTGAATTTTACAGCCTTGgattttcttaaccttttgagatttaagattt
tcttaAACTGTTCTAAATTTTTCCATTATGGATTATGAGTATTTTTATGC
AATTTTCTAAAGaatttgggtgttttagagctcataaagccttagaatgt
tcttagcttgttcttaatattttgggcatcgaagccttatgttcttatat
agtttgttattataaaaaagcgtttatgGTTGGGTTTGATTTATTAGATC
CGTAAAGATCAAGACTCAATTACCTTAGATACAAAATTGTCTTTTtctga
gagagagagagagggcATATTATATAACTCCATAAGCTTCCCCCTACAAT
AAGGAGGTTGGGAAGGAGTGTTATTAGTTAAgtataaaaatcagtttttt
agaTCGGCATAGTTTTATCATTGATGTATTCCTTTTTTAGAGAATCGGAG
AGATTTTGATCAATACTCACACAACATTGTTACAGATGAGACTTTTCCGt
aagtttttcttaaaaactttttttcagtttgaaaGGGAAACGAAATGACC
ATAATTCGTATTCCCCGGAGGGGAAACAAAAATAGATGCTTGATATGAGT
CGACtttaagacacccctgtctcgcagccccggtggaatcTTTTTCCTTA
GTGGGGATAAAagttcctattgaaatcccaaatgggaatagaaattctat
tgttcaaagtttaaaaaatccagtggtgatggagtgcaattaaaaaaaaa
acaattttgagtggggatgaaatataaGTCAATTTCCCTGTGGGGCTAAA
GTTACAGAgtattttcctaccggggacaaagtttttgccagattttccag
tggggctcgggtcccagcgggtctttgacacaggggtgtactaAGACTCT
ATCTTTCTAAGTGTCTCTAAGgcttaaataaacaaaaagtcaaaatagtc
TCTAAAAGGTCGGGAAATTTACGAAAATTATCCCTCTGAGAGTCACTTTT
ACactaattttgtttttcttgggTTTTCAGAGGTCCGGTTCGCACATATC
TGGCATATTCTCACCttataccccctccccctattTCAAATACGCATAAC
AAAGTTTTTTCTCATGTGGTGAGAACTTGCTATTTTTAATGTCACGCTAA
CCAGTTCCAATtcatttatttatcatttttagagTCATTAGGCCGTATTT
ATATCGTCTTCactttaatatttttgacaacagGTACGACGAAGCCTCTG
TATTACACGTTGGTTATCGCTTCATGGGTGACAGTAGAATGGTAGGACCA
AACAAGATCACCATAGAAACCAAACGATACAAAGATGCTGGCAAACTTGG
ACAACGGAAAGGTCTTTCACCAATTGAtgtccaaaaaatcaaaaaagttt
atgtaaGCCtctctttttgttgaaaatcatCCGCTGTAGAGGTTCGGTAA
AGCTTATAAGTGACCGTGTTCAGCAAAGGTGGTCTGGTAAGCAAAGGATA
TTATAGAACTAACAAATGTATTACATATTGATTATCATGGGTGAACagct
tttttgtaaaagctgatGTAATACTTAAAGTTGACGAAATCTGAAACCTT
TTGGTATGTTTTTCTGGGCACCTCAATTTTTGAGTAGAATATTAACAGAT
TCTTTGTTAAAAACCTTTTAATCACCATTTAAGTGCGAAGATATTCCAGA
AACCACTACCACCACAGCCGCACCACCGCCTGATGTTCCTGAGAAGAAAC
CAGCCGATGAAAAACCACCAGCACCGGAAAAACCGAAACCTGATGATGTT
CCTGCCGAAGAACCACCAAAAGAGAAACCCAAAAAACCGGTGGGCGACGA
GCCACCCCCAGAAGCACCGAAACCTGAAATCGAAGCACCTGAGGCACCTG
CTAAACCACCACCAAAGGTATGTGTTtgaattttgatactttttgtctaa
aaattgagtctgaaatcgcgTGTGGTTATAAAGAACTTTCCGTTTTTCTG
gcttaagaaaatattttttcaaaacaaaatttaacagaTAGCGTAATGGG
ACATAATTTGTTTAGTTGATTTCGATACGTAtaggctagaaatcttcaat
acttatagttagaatgttcagagcaaacttgagttctactaaaaagtctt
atttcatcggacGAGCTTAATctcttttgatatattttataaaagaaatc
ctttaatgaccaattaccgacaaattcacaCCTGTTTTTCTCTCTACTTG
AACCAAATTCAAATATCTCTGTTTTGACTTTAGGTGGCtgaagatgacgt
catcaaaccaGAAGATATTCCAGCACCAACCACAACCACGACTCCCGCTA
CTACCACTAGTACCACTAGCACTCAAGCACCTCCAGACGGTTGGTGCATC
GAAATCTTCATTTTACACGATAAAgaggggggggtttgtaggggttcgaa
ataccgtcaaaatttttgctgaatcccggaaattggaaaaataataacat
cgtcacaccgtctgattttaaaataccgctttcccgtctcttttttcgtc
aaatcccgtaataccgtactaaaaaagggccaatcccctcacaccgtaaa
agtacaacccccccccaTAAAGATATTGTCACAGTCtcaaaccttttttc
aaagtcATTAAAGTGAATTAAGTCATTAAACGTACACAACTGAAGATTGT
GCTCAACCAaataaaatacaccttttcgaccgtagtcgcgtggtCAGGCG
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccgt
cacaccgtaaaagtacaaaccccccccccccataaagATATTGTCACAGT
CtcaaaccttttttcaaagtcATTAAAGTGAATTAAGTCATTAAACGTAC
ACAGCTAAAGATTGTGCTCAACCAaataaaatacaccttttcgaccgtag
tcgcgcggtcaggtgcgtgctacttaattatttaattatcccccctaaac
tcgatccaatccttttttgacacatttttctattaaGGGCTGGGGCGGTT
GCAGTGGGATAAAGCGGCAAAAAAATggccgcgcggcaattggcggctac
ggtcgaaaagatgtattGCGAGACGTTTTTACCACCTTTTTCTCTAACGA
TATTTTGAAAGGCCTTAATCGTTAATGAAGATAAAATCGCCTACAGGAAT
TCAAGTTACAGATCCATCTTTCAACGTATCGGTGATTTTAGCATAGATAA
CGTTAAACAAagtcaaattattcaaatttcCATTCTTAGGTATCCCAGAA
AAAGCAGAAGATAAACTACCAGAGCCTGAGAAGCCAAAACCAGACGATGT
TCCTGATGCTAAACCACCAAAAGAACCAGAAAAACCAGCACCACCACCAG
CCGATGAACCTCCTCCAGAAGCTCCCGTCCCTGAAATCGAAGCACCAGAG
GCACCACCTAAAGAAGCACCACCAGTTAGTGCCGAAGACCAAGAAGTGAA
CCNGTCCCTGAAATCGAAGCACCAGAGGCACCACCTAAAGAAGCACCACC
AGTTAGTGCAGAAGACCAAGAAGTGAACCCTGGTGACATCGTTCCCACAA
CAACTACTTCGACAACCACAACAACCACGGAAGCACCGACCACAACAACT
ACGACCACTACGCCAACAACGACGACGACGACAACAACTCCAACAACGAC
GACGACGACAACAACTCCAACAACGACGACAAGtacaacaacaaccacta
cCACCACGACAACCGAAGAANCCTGGTGACATCGTTCCCACAACAACTAC
TTCGACAACCACAACAACCACGGAAGCACCGACCACAACAACTACGACCA
CTACGCCAACAACAACGACGACGACAACAACTCCAACAACGACGACGACA
ACAACAACTCCAACAACGACGACAAGtacaacaacaaccactacCACCAC
GACAACCGAAGAGCCGACTACGACAACTACGACAACAACAACTGAGGAGC
CAACGACGACAACAACAACCACGACAACCGAGGAGCCGACAACAACCACG
ACAACAGAAGAGCcgacaacaacaacgacaactGAGGAACCGACTACAAC
TACTACATCAACTACTACCACCACGACAACACCAGCTCCTGAAGAAGAAA
ATGCTCCAGAAGAGGATCAAAATAAACCACCTGAAGATAACCCTGAAGGT
GCAGGAGATAAACCCCCAGAGGAAAACCCTGATAATGATGGAGATAAAGC
TGGGGGAGAAGGTGACAAAACGAAAGATGATGGTGATAAACCAACTGATG
GAGATAAATCAGCTGATGGCGATAAGCCAGCTGATGGTGATAAACCAGCT
GATGGAGATAAGCCAGCTGACGGAGATAAACCAGGTGATGGAGATAAACC
AGGCGATGGAGATAAACCCGCTGATGGAGATAAACCCGCTGATGGAGATA
AACCAGCTGATGGAGATAAGCCAGCTGATGGAGATAAACCATCTGATGGA
GATAAACCAGCTGATGGAGATAAGCCAGCTGATGGAGATAAACCCGCTGA
TGGTGATAAACCAGCCGATGGCGATAAGCCAGCTGATGGCGATAAACCAT
CTGATGGAGATAAACCAGGTGATGGAGATAAACCAGGTGACGGAGATAAA
CCAGGTGACGGAGATAAACCAGGTGATGGAGATAAACCCGGTGATGGAGA
TAAACCAGGTGATGGAGATAAACCAGCCGATGGAGATAAGCCAGCTGATG
GAGATAAACCGGTTGACGGTGATAAACCAGCTGATGGAGATAAACCTGCT
GATGGAGATAAACCAGCTGATGGAGATAAACCAGCCGATGGAGATAAGCC
AGCTGATGGAGATAAACCGGTTGACGGTGATAAACCAGCTGATGGAGATA
AACCTGCTGATGGAGATAAACCTGCTGATGGAGATAAACCAGCTGATGGA
GATAAACCTGGAGATAAACCTGGAGATAAAccagatgaaaataaaaaacc
aGGAGACGTTTTGCAGCAGCCAGGAGATGATACCAATCCACTAGGGGATG
ATACCAATCCACTGGGGGATGAAATGAAGCCTGCTGAGGATGGGGCAGAA
AAACCGAAACCAGAAGATGGAAAGAAACCCGAGGATGGAAAGAATCCCGA
AGATGATAAAAAACCAGATCAAAAACTTCCTGAGAACTTAGATCAGCCAC
CACCAGGAGATGTTTTGAAAGTTCCCGGAAATGATGATAAACCATTAGGA
GACAAACCAACAGAGGAAGATAAACAGGATGCTAAACCTTCCGAGGGAGG
ACCTCCAGGGGAAGATGGTCAGCCACCTCCTGAAGCCGGACAAGCTCCTC
CTGAAAACGCTAAACCAGGTGACAGTGATGGAGACAAACCATCTGATGCT
GATGGACAAAAGCCTCCAGGAGACAACCCAGATGGTAATGGTCCCCCAGG
TGCTGATGGGAAACCTCCTGCCCCAGGAGATGATGGACAACCTGCTCCAG
GAGCTGATGGACAACCTGCCCCAGGAGCAGACGGACAGCCTGCTCCAGAT
GCTGATGGAAAACCTGCCCCAGGAGCTGATGGAAAACCTGAACAAAGTTA
CGACAGTTTGATAAATCAACCAACAACAACCACGACTACACCATTATCTT
TTGTGGTGGAATCAGATGAACCAATCACCACGACCACTACACCACCACCA
CCTTGCAGTGTTGAAACAACTGTTGATTGTAATGGACAACCACAGCAACC
TCAACAACAACCTGTACAACCCCAACAATGTGATGGCCGTAAGTTGCTAG
ATCTTTAATTTTTAACCTCTTGCTTAACTTGTTTCTATATCATTGTCTTA
ACATACATTGACTCCCTGAAAGCACTGATTTGTATTTGGTATATATGTCA
TAGCAGTTTTGAAAAACACCAAATTAAAATNCAATTTTTAACCTCTGGCT
TAACTTGTTTCTATATCATTGTCTTAACATACATTGACTCCCTGAAAGCA
CTGATTTGTATTTGGTATATATGTCATAGCAGTTTTGAAAAACACCAGct
aaaaaccttattttctcATCTTTTGGAATAATTTTAAACGGAGGGACCAT
AGACttataaagcccgaaaggcCAGTtggcgtgctttaagctcttccaag
ccaaaaaagtgaatatcgcaaaaaatattgctgctattgttctcaaaaac
ctgcgaagcttctgattggtcaagcgctgaaattctattgtaatgtcacg
tgactttagTAGGGTTTCCTGCCTAACCTCGGCacccttttcagcaaaag
cactctATATAGACCTTCGGgcctttataaatctatgggggTGACTGAGT
CTCTACTCAGGATATTAGTATTTGCTCAATTCTGATTCTAAAAGTGTAAG
AGTGCTTTGAATGTCATTAATCGAATGCCTTTTTTACCTTATTGAAGAAA
CGCCATGTTATCCACAAGATTGGTATTGGAGTAACCAAGGAGCTGCACAG
CAATGTGGTTGTCAACAGCAACCACAGCAAACACAACCACAACCATCACA
ATCAAATGCTCATGACAGAGATTCCATTGAAACTCCACAATGTGATTCTT
GTGAATGTGTTAGCATACATCCCAGTCAACATCAGGATACatggaaaaat
aatttcttgtgTGCTAAAAAGACACAATTTTCACCAAAactagaattttc
aaaatctggtACGTTATTCTATTGCACTCTACAATCTTTTTATACGAATT
GTTCACAATTCCTATcaaatatacacgtttttctttttatgagcGAGGGC
TAGTCAGTTAATTTTCAGTTGATTTTCAGTGGCTCTCATTTTctttcgat
ttttaaggcttaaaatttgaaatatacaTATGTTATATTCATTTAAAGGC
CACCTTATTATAAAGTTGCTTGTGACGGTACACAAACATGTACCTTCCCC
TTTATTCGTAAATCTTCCGGGAAGGGGAACTTGATTCGAAAATGACTGTA
AACTGGCGAAAGATTGGGGTTAGAGAAAAAATAGTTGAATGTTAGAAAAT
ATTCAAGGAAAAAGTCAATCTTCAGGGtgtattttttgaatattttttcg
tCTATTATTGGGTATGTttgacggtgaaaaagaatgcggctattatattt
tgatttttcccgtcTATTATTGGGTAAATATATTACCTCTCATATCGGCC
GCTTTGAGAAGCCAATANCCCGTCTATTATTGGGTAATATATTACCTCTC
ATATCGACCGCTTTGAGAAGCCAGAAAAGTTTACCTTTAAGTATCACACC
TACGGAAAGTCCCCTCTGGGGTttagaaatttcatcaaaaatgattttga
ataaattatgctttcttctttttcaggtCCAGTTGAGGGTAAGAATTGTT
TGAAAATGTCCGATTCAGAGGAATGGAAGGATTCATACATTTGTACAGAT
CAAGAAACAGCATATAATTTCATGTGGTCTGATAGAGAGGGTGAATCATG
TCTTAAGATCAAGGAGCCTCATGATTGGGAATGGAAAACCAAATATTTAT
GCAATAACAATAACAAAGAAAACAGAAGATGATAAATTGGAAAGAATAGA
CTTTTTTATTGAAGATTATTGACTTCTGAACACTGGATTGCACTTTTTGA
GGAGCTTAACAACGcgaatattaagctttaaatcTGTGTGATAGCATCGA
TGTTTACACCTTTGGAGAGGTAAAATCCAAATTCAACTAGAGTTATTGAT
ACTTGCATTTAAATCCTTTTGAGAATCTAGATAAGAAACTTAGAAATTAC
TAGGTACGAAATTTAGGCTCGGTTGGTCTCCATAGAAATTCTTTTGACCT
AAAATTAACAGCANTAGGTACAAAATTTAGGCTCGGTTGGTCTCCATAGA
AATTCTTTTGACCTAAAATTAACAGCAAACTTTTCTCTATTCAGCTGTTT
TAGAAAGTCTTGAAACTACACGAGTCTTCAAATTTTAGTGCCTGAGTAAT
TTTTGAGTATTCACAAATTTGAGGGCAAAGCTTTTTCACACTCCTGTGTC
TCAGACCCGTTGGGACCCCAGccacactggaaaattgactttgatttcat
ctccattcgaaattccatgtttaaaaattgcactcaaaaaccatccccac
tggcttttttaaccttggaacagtagaatttctatcccaattggtatttc
aataggaatttttatacCCACAGAGGAAAAAGAttcaccagggctgtgag
acaggggtgttaaggGGGTGTCAAGATAATGTCAAAATTATTTACGCAAT
TAAAATGTATGATTTTTTGTCGAAGTTAAGTTGAATTAGCTAAACTACAA
TAACATATTTTAATATAATCATATTgatttgtaaaaataatttaattaaa
caattataaaaatgtaatatttttgtaaaaaaaataatttgataaatTCT
TACTTTAACTTAATGAGGTATAATAAGTAAGTAAAATTAATTCTACATTC
AACTAATTAAACTCACACCCAAAGAAAATACTCCAGCGTCACAAACCC

Coding sequence (CDS) from alignment at scaffold_63:716721..730868+

>TCONS_00071675 ID=TCONS_00071675|Name=TCONS_00071675|organism=Clytia hemisphaerica|type=CDS|length=1689bp|location=Sequence derived from alignment at scaffold_63:716721..730868+ (Clytia hemisphaerica)
CTAGGAcacaaaaattatgaaaaattaatcAATGTAGGCTTTttccacaa
aaaaacaaaaattacacacatttcgaAGACAATGCGAAAATTGTACTTAT
TAGCTTTCCTGTTATTGTCAACGAACCTCCTACTAACAGAGGCGTTTCTA
TGGCGACATCTATTCGCCAATCACATCAGAAAGAATGATACGGTCCATGC
AAGGGACACCGCTATTGGGTCATCAGATTTGACCACCATTCATGAAAATG
CAGAAGtgcgtgcgaaaacgaaagatgaGCCGCCCATTTTGGGTGAAGAC
AATAatcaaatgGTTCCTTCACTTCCATTGAACATTTACAAAGAGCTTCG
AAACGAAGAAGAACTTGGTCGTGAATTACGAGACAAGTACGTTGAAGGCG
ATATTAAACTAGATGACAATACGAAACGAATTCGTGCACGTAATGATCCA
TCAAAGAATTACAAGTCAATTCCTGAATTAAAATGGGGATCAAAAGAAAT
CCCTTATGATTTGAACGGTGATATCACTGATAACAAAAGAAAAGCCATCG
AGGCAGCTATTGCAGATCTACAAAAATACACATGTTTACGTTTCATCAGT
CGTAAAAGTGCTAAAGATTACATTCATTTTCAGAAGAACCTCAATGACAA
TGAAAAAGGGTGTTTTTCAGATATAGGCCGGCAAGGAGGTAAACAAGTAC
TTCGTATTGGAAGCGGTTGCGGATTCAAAGGAACTGTACTTCATATGATT
ATGTTAAGTCTTGGATTTCCTCATATACATACCAGCTTCGACCGTGACCA
GTACATCAAAGTCCTCATTAATGACGTTAAAAAAAAGAATCGGAGAGATT
TTGATCAATACTCACACAACATTGTTACAGATGAGACTTTTCCGTACGAC
GAAGCCTCTGTATTACACGTTGGTTATCGCTTCATGGGTGACAGTAGAAT
GGTAGGACCAAACAAGATCACCATAGAAACCAAACGATACAAAGATGCTG
GCAAACTTGGACAACGGAAAGGTCTTTCACCAATTGAtgtccaaaaaatc
aaaaaagtttatTGCGAAGATATTCCAGAAACCACTACCACCACAGCCGC
ACCACCGCCTGATGTTCCTGAGAAGAAACCAGCCGATGAAAAACCACCAG
CACCGGAAAAACCGAAACCTGATGATGTTCCTGCCGAAGAACCACCAAAA
GAGAAACCCAAAAAACCGGTGGGCGACGAGCCACCCCCAGAAGCACCGAA
ACCTGAAATCGAAGCACCTGAGGCACCTGCTAAACCACCACCAAAGGTGG
CtgaagatgacgtcatcaaaccaGAAGATATTCCAGCACCAACCACAACC
ACGACTCCCGCTACTACCACTAGTACCACTAGCACTCAAGCACCTCCAGA
CGGTATCCCAGAAAAAGCAGAAGATAAACTACCAGAGCCTGAGAAGCCAA
AACCAGACGATGTTCCTGATGCTAAACCACCAAAAGAACCAGAAAAACCA
GCACCACCACCAGCCGATGAACCTCCTCCAGAAGCTCCCGTCCCTGAAAT
CGAAGCACCAGAGGCACCACCTAAAGAAGCACCACCAGTTAGTGCCGAAG
ACCAAGAAGTGAACCNGTCCCTGAAATCGAAGCACCAGAGGCACCACCTA
AAGAAGCACCACCAGTTAGTGCAGAAGACCAAGAAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044525XLOC_044525Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071675-exon-scaffold_63-1491911889:716721..716862TCONS_00071675-exon-scaffold_63-1491911889:716721..716862Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:716721..716862TCONS_00071675-exon-scaffold_63-1510915933:716721..716862Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:716721..716862TCONS_00071675-exon-scaffold_63-1575043694:716721..716862Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:716925..717087TCONS_00071675-exon-scaffold_63-1491911889:716925..717087Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:716925..717087TCONS_00071675-exon-scaffold_63-1510915933:716925..717087Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:716925..717087TCONS_00071675-exon-scaffold_63-1575043694:716925..717087Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:719070..719129TCONS_00071675-exon-scaffold_63-1491911889:719070..719129Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:719070..719129TCONS_00071675-exon-scaffold_63-1510915933:719070..719129Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:719070..719129TCONS_00071675-exon-scaffold_63-1575043694:719070..719129Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:719778..719939TCONS_00071675-exon-scaffold_63-1491911889:719778..719939Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:719778..719939TCONS_00071675-exon-scaffold_63-1510915933:719778..719939Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:719778..719939TCONS_00071675-exon-scaffold_63-1575043694:719778..719939Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:720589..720614TCONS_00071675-exon-scaffold_63-1491911889:720589..720614Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:720589..720614TCONS_00071675-exon-scaffold_63-1510915933:720589..720614Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:720589..720614TCONS_00071675-exon-scaffold_63-1575043694:720589..720614Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:720697..720803TCONS_00071675-exon-scaffold_63-1491911889:720697..720803Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:720697..720803TCONS_00071675-exon-scaffold_63-1510915933:720697..720803Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:720697..720803TCONS_00071675-exon-scaffold_63-1575043694:720697..720803Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:721368..721501TCONS_00071675-exon-scaffold_63-1491911889:721368..721501Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:721368..721501TCONS_00071675-exon-scaffold_63-1510915933:721368..721501Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:721368..721501TCONS_00071675-exon-scaffold_63-1575043694:721368..721501Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:721972..722013TCONS_00071675-exon-scaffold_63-1491911889:721972..722013Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:721972..722013TCONS_00071675-exon-scaffold_63-1510915933:721972..722013Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:721972..722013TCONS_00071675-exon-scaffold_63-1575043694:721972..722013Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:722511..722568TCONS_00071675-exon-scaffold_63-1491911889:722511..722568Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:722511..722568TCONS_00071675-exon-scaffold_63-1510915933:722511..722568Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:722511..722568TCONS_00071675-exon-scaffold_63-1575043694:722511..722568Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:723304..723472TCONS_00071675-exon-scaffold_63-1491911889:723304..723472Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:723304..723472TCONS_00071675-exon-scaffold_63-1510915933:723304..723472Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:723304..723472TCONS_00071675-exon-scaffold_63-1575043694:723304..723472Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:723754..723987TCONS_00071675-exon-scaffold_63-1491911889:723754..723987Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:723754..723987TCONS_00071675-exon-scaffold_63-1510915933:723754..723987Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:723754..723987TCONS_00071675-exon-scaffold_63-1575043694:723754..723987Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:724354..724459TCONS_00071675-exon-scaffold_63-1491911889:724354..724459Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:724354..724459TCONS_00071675-exon-scaffold_63-1510915933:724354..724459Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:724354..724459TCONS_00071675-exon-scaffold_63-1575043694:724354..724459Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:725610..726938TCONS_00071675-exon-scaffold_63-1491911889:725610..726938Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:725610..726938TCONS_00071675-exon-scaffold_63-1510915933:725610..726938Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:725610..726938TCONS_00071675-exon-scaffold_63-1575043694:725610..726938Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:726993..727028TCONS_00071675-exon-scaffold_63-1491911889:726993..727028Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:726993..727028TCONS_00071675-exon-scaffold_63-1510915933:726993..727028Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:726993..727028TCONS_00071675-exon-scaffold_63-1575043694:726993..727028Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:727101..727115TCONS_00071675-exon-scaffold_63-1491911889:727101..727115Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:727101..727115TCONS_00071675-exon-scaffold_63-1510915933:727101..727115Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:727101..727115TCONS_00071675-exon-scaffold_63-1575043694:727101..727115Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:727260..728108TCONS_00071675-exon-scaffold_63-1491911889:727260..728108Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:727260..728108TCONS_00071675-exon-scaffold_63-1510915933:727260..728108Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:727260..728108TCONS_00071675-exon-scaffold_63-1575043694:727260..728108Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:728768..729028TCONS_00071675-exon-scaffold_63-1491911889:728768..729028Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:728768..729028TCONS_00071675-exon-scaffold_63-1510915933:728768..729028Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:728768..729028TCONS_00071675-exon-scaffold_63-1575043694:728768..729028Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:729697..730123TCONS_00071675-exon-scaffold_63-1491911889:729697..730123Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:729697..730123TCONS_00071675-exon-scaffold_63-1510915933:729697..730123Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:729697..730123TCONS_00071675-exon-scaffold_63-1575043694:729697..730123Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1491911889:730188..730868TCONS_00071675-exon-scaffold_63-1491911889:730188..730868Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1510915933:730188..730868TCONS_00071675-exon-scaffold_63-1510915933:730188..730868Clytia hemisphaericaexon
TCONS_00071675-exon-scaffold_63-1575043694:730188..730868TCONS_00071675-exon-scaffold_63-1575043694:730188..730868Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071675-proteinTCONS_00071675-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:716721..730868 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.355539	0.41202	0.340576	0	0.0736057	0	0.309625	0.291805	0	0.325695	1.03923	2.41017	9.35182	9.866	5.75063	19.1649	9.80705	11.8333	0.0435157	0	4.42751	6.20293	4.33084	4.09369	3.76179	5.24242	0.0480768	0.319492	0	0.0999839
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
Blast
[Close]
BLAST of TCONS_00071675 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 104.76 bits (260), Expect = 2.633e-23
Identity = 73/232 (31.47%), Postives = 115/232 (49.57%), Query Frame = 2 
Query:  392 VEGDIKLDDNTKRIRARNDPSKNYKSIPELKW-----GSKEIPYDLNGDITDNKRKAIEAAIADLQKYTCLRFISRKSAKDYIHFQKNLNDNEKGCFSDIGRQGGKQVLRIGSGCGFKG--TVLHMIMLSLGFPHIHTSFDRDQYIKVLINDVKKKNRRDF-DQYSHNIVTDETFPYDEASVLHVGYRFMGDSRMVGPNKITIETKRYKDAGKLGQRKGLSPIDVQKIKKVY 1063
            +EGDI      + + A ++           KW     G  E+P+ L+    +  R+ I  A+A+ ++ TC+RF++ +  +D+I           GCFS +GR GG QV+ +   C  KG   VLH +M  LGF H HT  DRD+YI+V  N++      +F    S N++T    PYD +SV+H  Y  +  SR      +   T  +  +  +GQR  LS  D+ ++ K+Y
Sbjct:   74 IEGDIIRPSPFRLLSATSN-----------KWPMGGSGVVEVPFLLSSKYDEPSRQVILEALAEFERSTCIRFVTYQDQRDFISIIPMY-----GCFSSVGRSGGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNMLT----PYDYSSVMH--YGRLAFSR----RGLPTITPLWAPSVHIGQRWNLSASDITRVLKLY 279
The following BLAST results are available for this feature:
BLAST of TCONS_00071675 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTL2.633e-2331.47Astacin-like metalloendopeptidase OS=Homo sapiens ... [more]
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