TCONS_00072109 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072109
Unique NameTCONS_00072109
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1318

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072109 ID=TCONS_00072109|Name=TCONS_00072109|organism=Clytia hemisphaerica|type=transcript|length=1318bp
tgCAGCTTGTACAACGACAGTTTGTGGTGAAATCGCGCACCATCAACAAC
ATTTTCACATTGGTACAATCGACAGCAGATATTTTATTTGAACACTGTAA
AGAATTGAGTGTACTATGTAGAGGAGGCTTGCTTGGATTGGTAACGTCAT
TCTGTCTTCTCTTGGAAAAATCACTACAGACAAAGCATGTCAAACAAGAG
AAGATAGATAATTGCAAGAACAAGATCCACGAGCTTTTGAAAGAAGTACC
TCAAATACTTTCGGACGACATTGAAAGTTTGACTGCCGATTCCGTGACGT
ATGAGTGCTTGAACCTGTTAGAGTTCATCTATtcgaaatcagaattcgca
acAAAGATTCAAGACTCACTGACTTACAATGAAACTGATGTCTTGGAGAG
GTTGATTttactttccaaaaatatgaacACTGAACTACTACCAGATGTCA
TTTCGAAAATGATTTTATCTCTGGATACGCAGAGGTTAACCGATCGATTG
TTATCCATGGCTGATAGGCTGGAGGAACACTTAGTGAACGATTCAAATGA
ATTTCAACACGTCAATCTGTGGAAACATTTGTTGCAATGCAAATGGGATA
AAGATCAAAAGAATGTcttatttgaagttttacccAAGGTCATCATGGTC
TCCGTGAAAACTCTTTGCACCAAAAACATCAACCAATCTAACAACAAACG
AGTGTTGTTAAAAATCTTATGTCTAGCTGTTACAATCTCCAAGGCAAGTC
CTGTCACCACTTATATGTCAACTATTTTCAACATCTTCaccaatttgaaa
tctctacTGGAATGCAAAAGCTTCCAGGTAGATTTAGAGGATCTGTATCA
AATCTTGAGTTTGATGTTGTTTTTGCacacgtcatcattttcaacgaCAG
TTCATTGCTTCATCCACGCAGTAAATAaTCTGTTAGGTCGGTTAGTACAC
TTATCAAAGAGCGAAGAGATGAAACAAGAAAATTTCGAACCGTGTTTCAG
AAGAATCGGAAGGTTGTATGGTGAATTAGGCTCTCATAAAGAATTCATGA
CAAAGTTTTCACCGTACGCGATAAGTGGCTATATCAAGATTTGCTCAACG
GAATCCATACCAGTCCTGTATAAAgGACTCTTGGACGAAGGGATATACGT
CATCTTCGACACTTGTACCGACGTCGAACTTTCGATGATGAGTACGTCAT
TTGAAAACGCCGACCGAGAACATTTCCGACAATTACGAACCTTTTACGAA
AGACACCATAAATTTCATGGTTTTCCAATGGGTTGTCgagaattttgatt
tgaaatgttttgaGACTT
Run BLAST on NCBI

protein sequence of TCONS_00072109-protein

>TCONS_00072109-protein ID=TCONS_00072109-protein|Name=TCONS_00072109-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
QLVQRQFVVKSRTINNIFTLVQSTADILFEHCKELSVLCRGGLLGLVTSF
CLLLEKSLQTKHVKQEKIDNCKNKIHELLKEVPQILSDDIESLTADSVTY
ECLNLLEFIYSKSEFATKIQDSLTYNETDVLERLILLSKNMNTELLPDVI
SKMILSLDTQRLTDRLLSMADRLEEHLVNDSNEFQHVNLWKHLLQCKWDK
DQKNVLFEVLPKVIMVSVKTLCTKNINQSNNKRVLLKILCLAVTISKASP
VTTYMSTIFNIFTNLKSLLECKSFQVDLEDLYQILSLMLFLHTSSFSTTV
HCFIHAVNNLLGRLVHLSKSEEMKQENFEPCFRRIGRLYGELGSHKEFMT
KFSPYAISGYIKICSTESIPVLYKGLLDEGIYVIFDTCTDVELSMMSTSF
ENADREHFRQLRTFYERHHKFHGFPMGCREF
Run BLAST on NCBI

transcript from alignment at scaffold_71:216981..230895+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072109 ID=TCONS_00072109|Name=TCONS_00072109|organism=Clytia hemisphaerica|type=transcript|length=13915bp|location=Sequence derived from alignment at scaffold_71:216981..230895+ (Clytia hemisphaerica)
tgCAGCTTGTACAACGACAGTTTGTGGTGAAATCGCGCACCATCAACAAC
ATTTTCACATTGGTACAATCGACAGCAGATATTTTATTTGAACACTGTAA
AGAATTGAGTGTACTATGTAGAGGAGGCTTGCTTGGATTGGTAACGTCAT
TCTGTCTTCTCTTGGAAAAATCACTACAGACAAAGTGAGTGAGCATTCTT
TTGCAAGGATATTCAGTCATTTTTCGATTACTCGACGAACTTCACTTTTA
CCTtcagggaactaattttcgctggaactaattttcgcgtttttgagTGT
CTACCGCAAAAATTAGCGCAGTGCAATTTTTACttagaaatcttcaaaat
accttaaaaatatgaaagaatttcGACAAAAAGTAGGTGTCAACCGCGAA
AATCAGTTCTGCAAAAATAAGTTTAAATCGATTCTCAGTAAATCCTTGTC
AAGAAGGCGAAGCCTTTGTTAAAtacttttcatgatttttcgaaTCTCTA
TAAAAAATCCCGTCCAGTAAACTGTGGTTACATCTTCGTTTTGTATCTTG
TTCAGACAGGAAAAAATACACATAAGATTAGTCATAAAGGTAATTTCTTA
CCGATTCTTGCATACGGAAAAATCATGGTGTAGATTTAACACGTTTTTTT
TGGAcatacctccgggtaccccggtggaggtcctttaaattaacccatgt
ccgttcgttcgttcgtctgttgccagcttttctcgggattggctcattag
tttttttctgatttttggcacaatgatgcaaaatgcaatgcccaaaatgt
gaaggagcccgattttcggaaaaaaaaactttccggccaaaatgccggaa
atatcccggaaaaactgtttttttggcactttctcgagattttatcatta
gttttttctgattttttgctcaaagatgcgtattaacaatgcccaaaaca
tggccgagtccgatttttgagaaaaaaatttttccggccgaaaatgctgg
aaactGCCGTTCTTCTGGATTTCCATTGGACTTTTTTCTTatactcgggt
aagttatggcatgtctcaaaaactgaatattaccataatttttagatcgc
attagccgaCAGAAAATGGCCAAATAAATGACTGAACACGAAGGATACTA
TGatgaagtttctaacctgatgtgtaacctaattgttttttggctgattt
tcgcgaaaaactgcaaaaactgattatgacgtcataatcgatgacgtcat
gaaaactaaaatttgaatttctcaagaatggtttatccaattgtcttcaa
atttttaccaaagatgtatcttaccAAAGTCAAtcatttgagaaaaataa
atttcaaaattttgatgacgtcagcagaaattagtaaaaaatgaaaaatc
ctattttttgctgacgtgatcaaaatttcgagaaaatttttttttcaaat
gattgactttagtaggatacatctttggtgaaagtttgaagacaattgga
taagcaatccttgagaaattcaatttttagtttttatgacgtcatcgatt
atgacctcataatcagtttttgcggtttttcacGAAAACcaatgaaaaaa
caattaggttacacatcaggttagaaactacatcatagtacccttcatgc
tCAGTCATTTTTTTGGTCGTTTTCTGtcggctaatgcgatctaaaaatta
tggtaattttaagacatgccataacttacccgagtaattggttgtttttt
cattcaaaaacattattaatagcaatgcccaccatcaagcatgtttcaat
tttcaataagattgatttttgaagccggaactattcNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNcgagctgtactttatatttttttat
gaaattttgcacactgatgcaaaatgacaatacctaaaatgtgacggagc
cagattttcgaaaaacatttttttccagcggagaatgctggaaatatgcc
ggaaaaactgttttttggcattttctcgagattttatcattagtattttc
agattttttgcacaaagatgtgtattaaCAATGGCCAAAGTATgtccgag
tccgatttttgagaacaattttttccccggccgaaaatgccggaaacatg
ccggaaatcgccgtttttctggattttcattggactttttccttataatt
ggttgtttttcattcaaaaaaattattaatagcaatgcccaccatcaagt
atgttccaattttcaatgaaattgatttttgaagccggaactattcaaaa
attgcCGGAATAGcttattttcgccggaaagacagtatttcttgaatttc
tcgagctgtactttatatttttttatgaaatttagcacactgatgcaaaa
tgataatacctaaaatgtgacggagcccgattttcgaaaaacattttttt
tccggccgaaaatgccggaaatatgctggaaaaaccggttttttttttcc
attttctcgaattttcatccttattttactctgattttttgcagaatgat
gcgtattcgcaatgctcaaaacatgaccgagttcgatttatgaagaaaat
gttttttccggccaaaaaagccggaaatttccttttttgcatattttcat
tggattttttcgtttcattactttgtttttttcaaacaaaaacatcattt
atacgaatgtccacgattaagcatggttcaatttttcaatgCAACTGATT
TTGGcacaggaactttctaaaaatcgccagaacagccgagaaacgccgga
ttccatgaatttctcgagttgttctcgtattattctgcattttcatacta
ttgttctcatttttcaattgtcttacccagccggcacacaacgttttcaa
aacgttttttttaggtttagattacgttgtgaaaaaacgcgttgccaaaa
aacgttttaaaaacgtttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCTAG
TAAAGGTAGGTGAAATGTAACAAGACTTTAatgatatctttccaaaacta
tGCTAATTTCTTGTTAATACCCCTGCATCACTGAGTGAGCTTGGTAGTTC
AAACTTCTGAAATTTGACTTGCAGCCctttcgattgacttccaaatttgc
catactcaccaactttgccaaatccacaatttcaatgtcaaaagatcaca
gcttcatggcaaatttgtacatcNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNccaatcaaattgccgatcggcatt
gttttgctttagcattggaaggtcttctatttttcaaaaactttggcaaa
agtggcaaaattggagccGAAAAGAACACAAATctcgtgggaacagtgtt
ttgtatggagacgtatggaggtaagttccaaatttgccaagaatgccaga
tttaccacttcttttttatttggcatttatggcactccaattttgccaac
tttgccaaacttcTGTCAATCGAATGTAAAATAATTGGCAAACAGGGCAa
aattggcatattttgaagtcaatcgaattggctgttggaaacacccctgt
ctcaacgaCAATAATTTAGCAAAGTCCTTGGTAGAATACATTTCGTGAAA
CATaaagtttggccatgaaatttaagaagttttttctttNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGTTTTTCA
AACGCCTTGCAAAAACGTAATCTATAAAcgtttgaaaaacgtttttttga
cgttGTGAAAAAACGTTGTAAAGTGCGACAAATACAACCCGAaaaaaacg
ttttccaaacgttgtgaaaaacgttttttaaacgttttttaaacgttttt
ttgccggctgggtattacatcaatcttcaggtaggtccattcagcatgta
gcttgttattCTTTAAGACACACTaaataaaaacgttttttttttgaatt
attgaaacatatcttttttctttacatttttaAGGCATGTCAAACAAGAG
AAGATAGATAATTGCAAGAACAAGATCCACGAGCTTTTGAAAGAAGTACC
TCAAATACTTTCGGACGACATTGAAAGTTNGATAATTGCAAGAACAAGAT
CCACGAGCTTTTGAAAGAAGTACCTCAAATAATTTCGGACGACATTGAAA
GTTTGACTGCCGATTCCGTGACGTATGAGGTATGTATCAAGCTTCTCCAG
AAAGAAACTTTATACCTCCGTCTAAAGAAGCCCCACTTTTCATGACATAC
CTTTTAGGAAGTCAGCTAAACCATTTTAACTCCCTGGAATTGTCCAGGCA
CTTTGAGGTTAAAGTTCATctgttgtttttgaatttttgaaggatttaaa
aaattactcGGATGAAATCCTTTTGCTAGATTTTTTGTATATCTTTATCT
GGAATTGGAATTGGAATTGGAAAGAAAATGGGCTTCCTCTATGGGTAAAC
AATTTGGTTATGCgttctttttattttgtcatACTTTTCACAACATCAAA
ACTTGTGCTGTCATAATCTTGTGTATTTTTCAGTGCTTGAACCTGTTAGA
GTTCATCTATtcgaaatcagaattcgcaacAAAGATTCAAGACTCACTGA
CTTACAATGAAACTGATGTCTTGGAGAGGTTGATTttactttccaaaaat
atgaacACTGAACTACTACCAGATGTCATTTCGAAAATGATTTTATCTCT
GGATACGCAGAGGTTAACCGATCGATTGTTATCCATGGCTGATAGGCTGG
TAGGTTAATTCATATTTTGTTTCCATATTGAGACTTCGATGGTTTCATTT
GAATAAGGTCAAATCTGTTGTCGAATTCACAATGAGGGTGATTTTGGGTA
TCATAATTTATCTATGCtagaaatttcttattttttgttgtcTCGCTAAT
ACAGCAAATTGGTAGCAAAGCTGTGGTTAGTCAGGGGTTGTTTTGACATT
GAAATAATCCATTGGAGTAGAAGATTTCttaatttgaagaagaaaaaaaa
cgtcCAGCAGTAATTTTAGGAAATGCCTAGTCTACTGTTCTTttggactt
ttccagaaaaaaaattgaatattgggGGTGGATGATATAACATttcttgg
aaatttacccccggacattttgacttttgaccccccgggcggcaggtcta
accccccggacaaaCGTCAGTTGACATCCTGGACACTCATAAATACCTCC
AAACAgagcaaattttgtagatttttcactaccccccgcccccggacact
atatcctccagcCCCATGTACggacttttttctggaaaagcatATAATTT
TCTCTTCGTACTTCTTAGGAGGAACACTTAGTGAACGATTCAAATGAATT
TCAACACGTCAATCTGTGGAAACATTTGTTGCAATGCAAATGGGATAAAG
ATCAAAAGAATGTcttatttgaagttttacccAAGGTAACTTTTTTTCGT
TGGCAAATTTGAAAAGCTGGAATCAACGTATGCTTCTTTTTGTTCCATTG
TTCCAATTACCAAAGTTTGTCTCGTCACAATTTACCTTAAGTGGAAAATT
TTTCGCGAGCGGATATTTTCggcttttttttgatttttttcatttcccaA
GATATTTTGGAAAGAAAACCAGGGTTTTTGGCGAAATTCCTGGTTTTAAT
AATTTCGCGAGCATTAAATTTCGTGAATCATCTGGTGCTATTAATTGATA
ATCATTCCGATGGATTGAAAGAACCTTGGAGGAACTTGTAGTCGCTTTCA
AAGCAGGGAAGCTACGAATGTAAATGTCTTGGAGGAAAGTtgtcaaaaaa
tcaattattcAGCGGCGGGagatttgtttttgatttgagtGGTCTCAATT
GAATTGATGGAAACACAAGTATATGCAATTTTAGTTGGGGTTTCAACATT
TATGTGGTATGGACACTCTTCAATCTAATATACTACTGTCTGTATAGTAT
TCCTGTTTGTATAATCAACTACCTATACATTTTCAGGTCATCATGGTCTC
CGTGAAAACTCTTTGCACCAAAAACATCAACCAATCTAACAACAAACGAG
TGTTGTTAAAAATCTTATGTCTAGCTGTTACAATCTCCAAGGTATTCTGA
ACAGTTTCCAAACTCAGAGCTAAAGGATTTGTATCAAaagatcttttcat
aaattacgtcacgaacaacacttgcctcgttttgaaattattgccatggt
gattaacttccagcagattttattaaaagtacttcctattcataaaaaaa
tctcttaatgtctcaagagatataatcaccatggtaattgtttgaatacg
aggcaagtgatattcgtggcgtaatttatgaaaaggtctattacagtCCA
TGTTTTTGTGTATTGATCCAGTAATTCTTTATCAGTTGCAtagaccacag
atatcttatttAAAGTACTAGATAGTGCTACTTTATCTTTCGCATGGCGG
GAAAACGAGGAGGCGAGAGAAAGGTCTTGATTGATtaaattgccggcacc
gaactgTGATCTTGTTATAAAAATGGTGCGTTATTTCGCTTCAACCAGAG
TAGCTCCATCTAGTGTTTTGTATCAGATATCCATACTTTCCACCCCACCC
TAGCTAGATGGTGGGGTAACGGTTTTCCAAAAAAGTCGAACAGGGTGGGT
TTACAGGGATTTTTTGGCTTATGGCGGGGTTGGTGGCAAAGGATGGGGGC
TTCTTTCGAGGGTGGGGTTGAAGActttttccttcaatttttatattttg
ttttgttttgtttttaatgattcttAATCATCATTAAATCTGCATAGACT
TTGTGAAATAACACTTAgaaaaaattctagaaattatTTTTGCTCCATTT
TCTCTAGGAGTTCTATCTCCTGAAATAATTCTGCAAgataatgaaaaatt
caaacatttttgttattttagtaTGAATATAAAAACTGGACTTACTCTGG
CCTATCTGAGAACAAGTACTAAGAGTCTGGAAACATgtggaaattttttt
gtttttttgaagagTGGGGTATGGATATTTTGGTGGTCAAGGGCGGGGTT
GCTCTGAAAGGGCAGGGTTGCTCTGAAAGGGCAGGACTCAGAGAGTTTTT
AGATTTAGGGCGGGGTTGGTGGCAAAGGGTGGGGGGCTGTTTTCGAGGGT
GGGGTATCAACCCCGTAGGAAAGTATGGATATCTGTGATATAGGCCGGTT
TTAAGTAGTTTAGAGTTTGACTGTACACCTCCATTTTGTGTATATGGTTT
TGTTTGCTTATTTAGGCAAGTCCTGTCACCACTTATATGTCAACTATTTT
CAACATCTTCaccaatttgaaatctctacTGGAATGCAAAAGGTAATGCT
atcgaatttttctttatttttatcagtTAAAGTTACTTCTTTTATTTAAT
ACTGGGTACATAGCAACCAAGTTTGAAAACACGACCAACAAGACGGGCAA
GACGTGCTCTTGGAATAAGATCAGCTTTTCTATGTATATTGTCTTATTTT
TGAATAAGAATAAAAATGGATTTCTAGTTCTATTAGGGATCTAAACACCG
TATATTCGCGTCCATAAAACGCCCATTTACCGGCCCCACCATTAAGAGGT
TAGAGTGGAAAAGTATTGCTAAAACGCCCATTTACCGGTCCTTCCTTTAA
GAGGTTAGAGTGGGAAAGTATTGCTGCTACCAATTTTTCCTACCTcattt
taaataattatttctccTGTTTGATTCTCAGCTTCCAGGTAGATTTAGAG
GATCTGTATCAAATCTTGAGTTTGATGTTGTTTTTGCacacgtcatcatt
ttcaacgaCAGTTCATTGCTTCATCCACGCAGTAAATAATATCCTTTTCA
TTCTTTGGTTTTTCTTCCTTCTTCTTCTTGAAAGAGAGCTAAGAAAGATT
TTGCATTGAATGGATATATTTTATGGTTAATAGGATGGTTTAAACTAGAT
GTATATTATctgttatatattttatatggggtttgtaggggttcgaaata
ccgttttccagtcaaaatttttgcCGAATCCCGGaatcctgaaaattgaa
aaaataataacaacgtcacaccggtttgtagaggttaaaataccggcata
atgacaaaaataaggctaaataccgtcaccgtctgattttaaaataccgt
tttcccgtttcttttttcgtcaaatcccgtaatactgTACTAAACTACTT
GGGCAAATCACacaccgtcacaccgtaaaagtacaaccccccccctttat
ttacaaaaactgtatgttttatttctatttttgttttgtgcTCTCAATAC
CTCTtttccttgaggtcagatctctgatcttcaccatgtATATGCGTTCA
GCTGAGTTAGACTGTCTACCCGACTGTCTATCTTCCCCTATATATCGTAG
TTTCACATATTTCAGCATTCAATTTGTCAGTTGTTtcttaaccaaataca
aaatacaTCTGTTAGGTCGGTTAGTACACTTATCAAAGAGCGAAGAGATG
AAACAAGAAAATTTCGAACCGTGTTTCAGAAGAATCGGAAGGTAGGAAAT
AATACCATGTCAATAATGATTTCAATCAAATTGGGGTATAGTCACTGAAC
TTTATATATccctgacctttatatatccctggaccaagctataacCGCCA
TCGCGTCGCACAACCATCTTTGAccgaaatttcttttgaattggcacccg
taaagaagccattagtgttaaaaattaacgtctgaCGGCGCTACATCAAA
GTTTTGGAGGGAAAGTaaatctagcgctctcgatgcatttacaccgctat
tgagcagtgatcaaagattttgcttggtcaggattgagaaacttggtcca
gggtatataaaggtcattgGGTGTAGCCAAAGCTTCCTGTGCATCTTGCA
GCTACTCATCTAGACCTGCAACCAATAACGGATACTCCTAATTTATAGAA
GACCGCCTTTTCTTGTCTACATAGTAGAATCGCGCAATCTGGTGTATTTT
GACAGGCTCCATTTATTGGCTCTATTTTTTGGCTTTGtttgaggtggtag
caaatccGTACCACTAGATCTAGtctctttttgaagaaaaacaaatagaa
aaccatgaccaattttttcaaattttggaggtattttcttatttttttac
agTTTCATGAACTTTGATggaattttagaaaacattttattgttttaatg
ttttcatataatttttgaaaacaaaagtgaaaaaattcaagatagcGAAA
TCCTCTAGCCTaattcactggactcagcgccataaaaaatcatcagaaag
caaagttcagtcagaagtagacatATGTTTTACTCTACGCTCAATCTGAG
GACCGATCATCAACCGTCTTAAGGAGACTTATGACCAAACTACGGAAAAA
AGAAGTACGACTTGATCCTTAGTCAATGTTAACTTCCGAATATGTCAATA
TctatttgacaaattttgaatttttcctatttctccgaccTTTAGtggga
ttgaaatttgattttcagatttttccgacccttagcgggactttggaaat
ccaaaaaaggtactcttaagggcggcacataccgtaccctcaatttgcct
aagtactcccTCCCCCGGGCTGTTTATAGGTCACTTGTCACCATCATCAC
GTTCTGATTGTGCTTTAGGATCTTTTACACGCCGTCCGTCAACCGCCGTT
TATTATTTTGCTTTCAGGTTGTATGGTGAATTAGGCTCTCATAAAGAATT
CATGACAAAGGTTGGTATTTTATACAACAAACACTATtggaatacagttg
acgctctctaattcgacgttctactctTCGATAggttcccttattcgatg
aaatttaaagtccccgtcaacaagaaactctcataaacgacgctccctta
ttcaatgaaaatccaattcctcttgaaaatcaaattaaatttcgcggatt
tgggtgtcaccCACAAGAATAAGTtccaatggaaatttgaaaaggtctta
tccgcgaaatttttgttttcaattaatttccaaaaaatgtcaaaagaccA
CTTTCACTATGTTTACCGCCATCAAAGAAGtgctaataatgcgtatttcg
cAACCAACATGCATTGTTGGcagcaaaataacaaaaatagaaCAAAGTCT
TGAAAATATTAGTTAACAATAgagtcatccgcgaaattaagtcctcgcga
aatcttaaaatttcgctgatGAGTTCAACCGCAAAATATAAtctccgcga
aaattaatcccatttAAGTATACTCTGAACCTTATTGaaacaattttgag
ctttttgatcctcaaatcctaaggtatagtctagcgttaaaactctacca
ttcCGACCTAAGTTGGAGTGCTTCCAAATAGTCTGTGGCTAAAAGATTTC
ATGggaatttcccctttttttttcaaatattacggCCTTGATTGTATAAC
GTCTTTCTCATGTTCTTTTTTACTATGTTCTTACTTTATAGTTTTCACCG
TACGCGATAAGTGGCTATATCAAGATTTGCTCAACGGAATCCATACCAGT
CCTGTATAAAGTGAGCTTttccgttttttttttgcaatttttattttgaa
tgtaaatttggttgaaaaatttgcgATAATTAAGTTTGCTTTTGATCTTT
CTTCTACTGAAGCTATAGCTTTCATTTACACGCCAGTACTAGCAAATAAA
CAATTTTGTTTGAAGTTGGGGCTTCGAAACATCTCTGAGTGAAAAGAAAG
TCACTTGTAGggatcattttaaaatttttgctggTCACAGAAGTATTGGT
GCAGTGAAGTTTTcataatgggctattccagaaaaaatttgtaccctCTA
TGTTgagatcttttttttaaaaggtgaccccctggatttttttccaattt
ttcaggacccgcttggatttttttctcccaaTTCTTTGGACCagcctgga
ttttcgacctcgttatactgaccctggattttcaacccaatttcaccctg
gattttatcattcaaaaaccctggatttttattttccagaccaccctgga
cgtaaCACCTCATCAACATAGGGgatacagactatttctggaatagccta
aTTCTAATGTAAAGATGATTCAGTAATAGTTCTCAAATTAAAGAGCAGAC
CTCGAGCAAAATATTCtctcaaaaatgaaaatcactATGAACCATGGAGA
TTTAATTTAGAGAGTAGACTGTTGATCATTTGCCCTAGAGAGATcctttt
tgccattttttctcTCGAAATCCAAAAAGTTTcctaaaaatcatgatttt
ttttaCCCTTACAAGgactaatttgaaaatttctgatttttgtaaccctt
agagagattttggaaggtgaaaataccttatcgtccgcacatacccagca
cccatctTTGTCTAGGTATCCCCACTCTGATCATTTGTAAGcaaaccatt
tttgtttttctctaggGACTCTTGGACGAAGGGATATACGTCATCTTCGA
CACTTGTACCGACGTCGAACTTTCGATGATGAGTACGTCATTTGAAAACG
CCGACCGAGAACATTTCCGACAATTACGAACCTTTTACGAAAGACACCAT
AAATTTCATGGTAAAACCTAAATCGGGATATCCCTAAATCGTGTATTTCt
cgtttattattatttttatattttactccttttttaaaatcgaaaaatcg
aaGTCAATCAAAATTATTCATCTTTGATGGAAGTCTACTTCGATGGTTAT
TTTTATATGCTCTTCATTTTTTCCCCAATCTAAAacttctttttcacttt
tttgattttgtagcAACTTTTTGGCAACGGGTAGATGACAGTTAAATATG
TTGTAGTCTGTTGAGCTAcggttgacgctctctaattcgacgttctacta
tttgatacgctCCGTTACTCGATGATACTAAAAGTCACCTTCATCAAGAA
ACTTATGACCaacactcccttattcgatgaaaatccaattcctctTGAAA
AAAAGGAATAAGAGAGTGTCAATTGTCGGTACTCTTGTAACAGAGTGTAT
CTCATGTAGTACAtcgcaatagaccttatcggagttttcgatttttgtaa
aaaaagcgatgcattgtgggattgtttcgagtgtattacaatagaattcc
ctcgaggaattcctaagagatttctattgtaatacactcgaaacaatccc
acaatgcatcgcttttttagaaaaataaaaaactcagaTAAGGTCTATTA
ATTTTGTCTCTTTAAAGACAATAAACTAGGAGGCTCATTTCTTTCTCATT
TTCTCCTTGACTTAGAATAAAACATATTTCCAACCCCTTTAGTAGGTTTC
CCCTCGAAATCTTTTGATAATGTAAAGGTTAAACATGGCTAATTTTCAAA
TAAACCAACCTCCCCTAATTTGAAGTTTAAACACTGGGTGTGAGCAAACT
GCCCTGTTTAGttaattgaaaattatttcaccTGTCGTTTTTCGTCTTCT
ACCTTATAACATCAAGGTTTTCCAATGGGTTGTCgagaattttgatttga
aatgttttgaGACTT

Coding sequence (CDS) from alignment at scaffold_71:216981..230895+

>TCONS_00072109 ID=TCONS_00072109|Name=TCONS_00072109|organism=Clytia hemisphaerica|type=CDS|length=1296bp|location=Sequence derived from alignment at scaffold_71:216981..230895+ (Clytia hemisphaerica)
CAGCTTGTACAACGACAGTTTGTGGTGAAATCGCGCACCATCAACAACAT
TTTCACATTGGTACAATCGACAGCAGATATTTTATTTGAACACTGTAAAG
AATTGAGTGTACTATGTAGAGGAGGCTTGCTTGGATTGGTAACGTCATTC
TGTCTTCTCTTGGAAAAATCACTACAGACAAAGCATGTCAAACAAGAGAA
GATAGATAATTGCAAGAACAAGATCCACGAGCTTTTGAAAGAAGTACCTC
AAATACTTTCGGACGACATTGAAAGTTTGACTGCCGATTCCGTGACGTAT
GAGTGCTTGAACCTGTTAGAGTTCATCTATtcgaaatcagaattcgcaac
AAAGATTCAAGACTCACTGACTTACAATGAAACTGATGTCTTGGAGAGGT
TGATTttactttccaaaaatatgaacACTGAACTACTACCAGATGTCATT
TCGAAAATGATTTTATCTCTGGATACGCAGAGGTTAACCGATCGATTGTT
ATCCATGGCTGATAGGCTGGAGGAACACTTAGTGAACGATTCAAATGAAT
TTCAACACGTCAATCTGTGGAAACATTTGTTGCAATGCAAATGGGATAAA
GATCAAAAGAATGTcttatttgaagttttacccAAGGTCATCATGGTCTC
CGTGAAAACTCTTTGCACCAAAAACATCAACCAATCTAACAACAAACGAG
TGTTGTTAAAAATCTTATGTCTAGCTGTTACAATCTCCAAGGCAAGTCCT
GTCACCACTTATATGTCAACTATTTTCAACATCTTCaccaatttgaaatc
tctacTGGAATGCAAAAGCTTCCAGGTAGATTTAGAGGATCTGTATCAAA
TCTTGAGTTTGATGTTGTTTTTGCacacgtcatcattttcaacgaCAGTT
CATTGCTTCATCCACGCAGTAAATAaTCTGTTAGGTCGGTTAGTACACTT
ATCAAAGAGCGAAGAGATGAAACAAGAAAATTTCGAACCGTGTTTCAGAA
GAATCGGAAGGTTGTATGGTGAATTAGGCTCTCATAAAGAATTCATGACA
AAGTTTTCACCGTACGCGATAAGTGGCTATATCAAGATTTGCTCAACGGA
ATCCATACCAGTCCTGTATAAAgGACTCTTGGACGAAGGGATATACGTCA
TCTTCGACACTTGTACCGACGTCGAACTTTCGATGATGAGTACGTCATTT
GAAAACGCCGACCGAGAACATTTCCGACAATTACGAACCTTTTACGAAAG
ACACCATAAATTTCATGGTTTTCCAATGGGTTGTCgagaattttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044785XLOC_044785Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072109-exon-scaffold_71-1491911889:216981..217164TCONS_00072109-exon-scaffold_71-1491911889:216981..217164Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:216981..217164TCONS_00072109-exon-scaffold_71-1510915933:216981..217164Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:216981..217164TCONS_00072109-exon-scaffold_71-1575043694:216981..217164Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:222315..222399TCONS_00072109-exon-scaffold_71-1491911889:222315..222399Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:222315..222399TCONS_00072109-exon-scaffold_71-1510915933:222315..222399Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:222315..222399TCONS_00072109-exon-scaffold_71-1575043694:222315..222399Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:222474..222509TCONS_00072109-exon-scaffold_71-1491911889:222474..222509Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:222474..222509TCONS_00072109-exon-scaffold_71-1510915933:222474..222509Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:222474..222509TCONS_00072109-exon-scaffold_71-1575043694:222474..222509Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:222864..223079TCONS_00072109-exon-scaffold_71-1491911889:222864..223079Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:222864..223079TCONS_00072109-exon-scaffold_71-1510915933:222864..223079Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:222864..223079TCONS_00072109-exon-scaffold_71-1575043694:222864..223079Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:223649..223765TCONS_00072109-exon-scaffold_71-1491911889:223649..223765Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:223649..223765TCONS_00072109-exon-scaffold_71-1510915933:223649..223765Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:223649..223765TCONS_00072109-exon-scaffold_71-1575043694:223649..223765Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:224317..224421TCONS_00072109-exon-scaffold_71-1491911889:224317..224421Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:224317..224421TCONS_00072109-exon-scaffold_71-1510915933:224317..224421Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:224317..224421TCONS_00072109-exon-scaffold_71-1575043694:224317..224421Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:225596..225672TCONS_00072109-exon-scaffold_71-1491911889:225596..225672Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:225596..225672TCONS_00072109-exon-scaffold_71-1510915933:225596..225672Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:225596..225672TCONS_00072109-exon-scaffold_71-1575043694:225596..225672Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:226062..226168TCONS_00072109-exon-scaffold_71-1491911889:226062..226168Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:226062..226168TCONS_00072109-exon-scaffold_71-1510915933:226062..226168Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:226062..226168TCONS_00072109-exon-scaffold_71-1575043694:226062..226168Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:226787..226871TCONS_00072109-exon-scaffold_71-1491911889:226787..226871Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:226787..226871TCONS_00072109-exon-scaffold_71-1510915933:226787..226871Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:226787..226871TCONS_00072109-exon-scaffold_71-1575043694:226787..226871Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:228048..228090TCONS_00072109-exon-scaffold_71-1491911889:228048..228090Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:228048..228090TCONS_00072109-exon-scaffold_71-1510915933:228048..228090Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:228048..228090TCONS_00072109-exon-scaffold_71-1575043694:228048..228090Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:228822..228890TCONS_00072109-exon-scaffold_71-1491911889:228822..228890Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:228822..228890TCONS_00072109-exon-scaffold_71-1510915933:228822..228890Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:228822..228890TCONS_00072109-exon-scaffold_71-1575043694:228822..228890Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:229796..229940TCONS_00072109-exon-scaffold_71-1491911889:229796..229940Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:229796..229940TCONS_00072109-exon-scaffold_71-1510915933:229796..229940Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:229796..229940TCONS_00072109-exon-scaffold_71-1575043694:229796..229940Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1491911889:230847..230895TCONS_00072109-exon-scaffold_71-1491911889:230847..230895Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1510915933:230847..230895TCONS_00072109-exon-scaffold_71-1510915933:230847..230895Clytia hemisphaericaexon
TCONS_00072109-exon-scaffold_71-1575043694:230847..230895TCONS_00072109-exon-scaffold_71-1575043694:230847..230895Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072109-proteinTCONS_00072109-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:216981..230895 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.03797	6.39518	3.87571	3.93352	15.1857	12.9545	12.5444	15.9024	10.6484	9.71702	6.57942	8.39443	11.1061	12.3955	9.50051	10.8193	10.4467	9.42752	4.35288	4.19912	12.3413	10.3194	17.6797	14.0393	15.2844	17.2888	2.45648	2.62162	9.72898	11.2146
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR018849Urb2/Npa2_C
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072109 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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