TCONS_00072118 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072118
Unique NameTCONS_00072118
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1689

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072118 ID=TCONS_00072118|Name=TCONS_00072118|organism=Clytia hemisphaerica|type=transcript|length=1689bp
AGTAAGTACTATCACTTTCACAGTTTCAGCAGAGGAAAAGTCTGAATGTA
ACTTGAACTTACCTAcaagaaacatattttttctgATGTAGAAATGTAGA
ATTTCAAGGAAAATAAGAAATGGTCGAGAAGAAACTTATTTGCACAGTAT
GTTCGGAACAATATCCTGCCAATGCAAAGTTTTGCTTGAAGGATGGACCA
TCTTTGAAACCCCTAGAAGAAAGTGTAGCACCTGAAGAAAGGAAGTTGTG
CAAGAAATGTGGAAAATATTATCCAAAggaatcaaaattttgtatgGAAG
ATGGGACTCTTCTTACAGAACTACAACCTTTGACTGAAGGAAGAAAGTAT
TGTCCAAAATGTGGAGCCAATTATCCAAAAGAATCCAAATTTTGCATGGA
AGATGGAACACCTCTCAAAGAACTAAAAACTGAAGTTACAGCTGAAGAAA
GGAAGTATTGTCAGAAATGTGGAAAAGACTATCCAAAGGAAACCAAATTT
TGTGAAGATGATGGAGCAGGTCTAGAACTTCAACCTATCAATGAGGTTAA
AAAAGGTGATAAGAACAATGGACAAGAAGATAAGAACGATGGACAAGAAG
ATATGGAGATATGCGAGGAGGAAGTTCAacacaatcaaaacaaaatgGCA
CAAAAACAAGTTGATAACCATCAAACTTCATTTGGTAGCAATGCCAATGA
CAGTTCCAATGCTCAATATGCTTTGAGCTTTCCAAACGCAAACACCCAAG
GTATCAGTGAAAACACTAAATGTAAGAATCAGCACATTGATAACGATACA
GAAATTGCTGAAGAGAAGCCTAGTGAGGAAGGACAAAACAGCAAAATTGT
TGGCAAggaagaaaataaatcagagAACGACTCTAAAACCTTGCTTCAGA
CTGCTGAAGAATCTGAACTATCAAACACCCAAGGTATCAGTGAAAACACT
AAAGTTGATAATCAGCACATTGATAACGATACAGAAATGGCTGAAGAGAA
GCCTAGTGAGGAAGGACAAAACAGCAAAATTGTTGGCAAGGAAGAAAACA
AATCAGAGAACGACTCTAAAACCTTGCTTCAGACTGCTGAAGAATCTGAA
CTATCAAAACTTAAAGAAGAACGCAATCAAATTGAGACCCGAACATTGTT
CCAATCAAAAGAGACTAATGAGCATCCagtgaaaaaagaaaagcaagcaA
CAGAAAATGATTATACAAAGGCCAAACAGAATGGTTCAAATGCACAAGTT
AAGAATGAAAACACATTCAACATCCAAGTGTCTGATGAAAAGACAAATCT
AAgtgAGAAAACTAGCAGTGAATCTAGTGGACAATTATCAGATGGTAGAA
ACaacactgaaaatgaaaaaggcAAGAGGGAGCAAAATGAAGCCAAGGTA
AACCAATCCAAGGAGAAACCGACCAAAGAAAAGGattccaaagaaaaaga
agaacaaaaagagaaaaaacaagATAATCAAGCAGGAGGAAAAGAGCAAT
CAAAAAAACAAGATCCACTCACCAAAGATCAAAATGGTGTAAAAGAAGGA
GTGACAACTAGAAGTATGGCAAATAAAACAGAATCAAATTCATCTGCGCC
ACCAAGTTATGCAAAAGCGACTGCAAGCTCAGCAGCTAAAAAGAATGGTG
CCAATGATCAGAACCAAAAGGCTCAAGCTAATGTGAAAG
Run BLAST on NCBI

protein sequence of TCONS_00072118-protein

>TCONS_00072118-protein ID=TCONS_00072118-protein|Name=TCONS_00072118-protein|organism=Clytia hemisphaerica|type=polypeptide|length=523bp
MVEKKLICTVCSEQYPANAKFCLKDGPSLKPLEESVAPEERKLCKKCGKY
YPKESKFCMEDGTLLTELQPLTEGRKYCPKCGANYPKESKFCMEDGTPLK
ELKTEVTAEERKYCQKCGKDYPKETKFCEDDGAGLELQPINEVKKGDKNN
GQEDKNDGQEDMEICEEEVQHNQNKMAQKQVDNHQTSFGSNANDSSNAQY
ALSFPNANTQGISENTKCKNQHIDNDTEIAEEKPSEEGQNSKIVGKEENK
SENDSKTLLQTAEESELSNTQGISENTKVDNQHIDNDTEMAEEKPSEEGQ
NSKIVGKEENKSENDSKTLLQTAEESELSKLKEERNQIETRTLFQSKETN
EHPVKKEKQATENDYTKAKQNGSNAQVKNENTFNIQVSDEKTNLSEKTSS
ESSGQLSDGRNNTENEKGKREQNEAKVNQSKEKPTKEKDSKEKEEQKEKK
QDNQAGGKEQSKKQDPLTKDQNGVKEGVTTRSMANKTESNSSAPPSYAKA
TASSAAKKNGANDQNQKAQANVK
Run BLAST on NCBI

transcript from alignment at scaffold_71:628289..639973+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072118 ID=TCONS_00072118|Name=TCONS_00072118|organism=Clytia hemisphaerica|type=transcript|length=11685bp|location=Sequence derived from alignment at scaffold_71:628289..639973+ (Clytia hemisphaerica)
AGTAAGTACTATCACTTTCACAGTTTCAGCAGAGGAAAAGTCTGAATGTA
ACTTGAACTTACCTAcaagaaacatattttttctgATGTAGAAATGTAGA
ATTTCAAGGAAAATAAGAAATGGTCGAGAAGAAACTTATTTGCACAGTAT
GTTCGGAACAATATCCTGCCAATGCAAAGTTTTGCTTGAAGGATGGACCA
TCTTTGAAACCCCTAGAAGAAAGTGGTAAGATTTTGGGGAATACACCTCT
TTTAAATCCAATCAAGAAACATCCAAACGAGTTAATCAAGTTTTTAATGT
TTAAGGatgtcaaatttttcttttttgaaaaaatttagtAGATCAGCAGG
TCCAAGTTTTTTTCGAGTAGACAGGAGACAGGTCAGtgtcagagctgtga
gtccattttcagacttaaaaacaaaataaatagcTTCTTGCTGGTcttgt
tgaaaaaaaagtttaacatttttaaaaagatcagagttttttatagagac
taccgtgagtggtcctaaatccaacagccctgcctaaatccgatggggtc
tttcaaagataaaaactagattaaaaacaaacttttcgctgtgacgcaac
gaaaatCAGTTTGGCAAATTGCATAGATCCGCAATGTTGCAATATTCCGC
AGCGTTGCGTTTTTTTGCAACGATTCCCTCAGCGTGCACTGCGATTTTTT
GCAACGTTCCCAATGGAAGTGTGCGATTATGAACACCAACTATGACGACC
AATTTTCGCAAACAGAAGCAAAATTAGGCAAAATCTGGCATATTTGAACA
AAGTAGCATTTCTTCCAAGAATGATTGTGAATAATGGCtaggtaggaaat
taaaatgctagggtgaaaagtttccttttgggttgttcttcaaaatgcaC
ATTATTTTGGGACCCTGGCCCAGGCCCTGTGAAGACGGTTTTGGTCCATA
GGCTAGGGCTGCGAAATTATGCAGCGGTAAAGCTGCAGAATTTCGCAACG
TTGCGGAATATCACAACgcaaaaaatgtgaaatttcgcaacgttgcggat
ctatgcaatttgccgaactgaaataccaaagtgtcagctaactgagagat
ttgatacattgaaccaattgaaccaaataacaataattgcttcttataca
aaacataattttttattacaaagttgttaacattttaaaaacgagCAACc
caacagattcagaataatatagaggtaattattttacACTCACACtcttt
tgatcacattaattgtcatcttgttagatgttttgtttttgagagttctt
gcaatagtttattgttcaacttggagagggaatgtttgtaaacatagaat
tttttttcatagcatttatttggggggtcggatttttAGGCAGGCAGTTA
GGGaaagttagggaaaccatccaggaccctgccattctataagccagcaa
aaactaaatgacacttaTAAACTTAAGTTTCTTACCAtttcccatcgaaa
acaaccaaaaacattgctacttcccaaagccggagaccaaaacaaattat
cttccaagattatggtgcccttttggatctattgttaaagccatctaaaa
tggtggaaatagttgcggaaagacaaaggcgcccgctgcttcgagggtgg
taacgccaaaacgccaaatatgatcttccaacagaaggcgagttagttga
cgcgcgagttacgtcacgcACTCAACCTCAGCGCACAATGAacggtgttt
cagtgaatatcaataattataagaagatcttatgtgcttaacttcAGTAA
ACCTCGAGTGCttcaatgaaaatgaagaaggtaagaagataaaaaatgcg
ccggataattttcattgtaacagtttggtcaatcatcgctgaaagtttga
aaaagtttttccgacgcaaaaaaacatttcaactaaagaaaagcacagtg
tgcttatacttactatgtttgctacatcatctaggctaaaaaaagtgcga
aaagacacaaacgtcattttttaatgagtgatgttataatttttttgatt
gcggccgcgtacaggaactcgccaaatgttcctaactggcagggctgtca
gatttaggaccagtCACGGTATTTTACTTTATTTAGCGATAAGAGAGGAT
AAAAGAGTTTGACCGACATTAATTAGACCAACTTTTACAGTAATTGCTCT
ATGCTCTAAAAGAGGCTAATTTTTTCCATTGTAAAGCAAGAAAGAAGAGT
GTTTGACGCCCTTTATGACACGCCAAATTACTTTTTGTGACCAACTTTTT
TTTGACACTGTCTCTGCATTTAGGCTCTATATCCTGTGTCATGtccaggc
gatgtcaatcgaactgttcagTTACCGAAATAATCGAAATCAattgaact
taatcgaacgataggtgttcgattaccaaaccaaatcgaacaatcAACAA
AGCAAGAAATTTTGGTAAAGTTAGATTAGTTTGATTGAAGTTCGATGTGT
TAGATTTACGGTTTTTGTTCACAAATCATTCCCGATGCGCATGAACGACT
CTTTTCTGCTAATCCAATGATTGTTGGGGATTGTTTAGGCTAGAGCTGTT
GCGCTAGCAATAACTGGAACaatttgagctacaaaaacacTGATCGAACT
TAATCCAAACTGCGATtagtaatcaaactttaatcgaactaaagaaatat
tttttgataaagcTCGATTACTGTGCAAtcaggttcggtaatcgaacgtT
TTGTTCAATGAAATTCGATGGTTCAATTACTAAAATTggtttgatagggt
tcggttgacattgCCTGGTCATGTACACAAGACACGCCTTATATCGGAGA
TCACCCTTGAGCCCGCTTGTGTTGTGGCGGGTGATGGGATAAAGTCAGTT
GCACTTGCAGTTGGTTTTTGGCGGGCTAATGGCTGGTTTGCCTTATACAT
GaataatgggctattccatttttaaatcaTACATGGGTCTGAGCCTTtat
tttccaaggggtttttgttcattttttttcagattttccaagggggatAT
TGAAgttttccagggggttctctcTTCCTAAACTGACATCAATACATAGT
CATTTCCCAGGcccttttttcacaaaatttcactttccagggtTGTCGAC
CCCTAATTTCCGGGGGATAtttgttatccaaaatttccaggggggtttgt
gaaaaaagttcgtcaatacccctgtacaatttttttttggcataGCTCAA
GGCTTTAATCAGATTAACTTTCATGAGATTGAATTTCTAACGAAGACTTG
TTCATTATGTCATCCCCCAGTCTAGCAAGCCAGTCTTTGCCAGACCAAGT
CAAAAATAACAAATGGACCACCATAGGAGCTACCATAGCAGGAAATCAAA
GACTAGGGTAACCTCTGATCCAAGGCGCCTCGCGTGCAACAGGTTGTAGA
GCCTAATGTGCGCATGCTTATTTCCAACTATATAAACGTAAAGGGGTTCT
TATAATTTTGAGTAATTTGGTAATTGGGaaaaaatgttattgaaaaaaaa
agaaagaaaaaaaattggtgtcAAAAATAAGAGTTACTTATAAAAAGTAA
TTTTGCATGTCATATTCTTTGTGACTTTTGTGTAACTGGGCCTTTGATAT
TccaggattacgattttacaaTCTTTAAGGATTTTTGCCTCCCTAATCCA
AATTCCTAAACTCTTTACTTTTATTAAGGAAGattgaaattagagttttt
cagcattccaaaaaaaaagcaatgccaaatttttttcattgtaagGTGAC
TGGGAGGAGGCCCCCTCTTTAAACTGTAATTTCCAACTAAAATACTTGAC
aatgatttttgtaattttggtgTCAAAATGTGTCAAAACACCAAGGGTTT
ATTTACAAACATGTAGGAATTGGTGTAAAAATTACATCCACTATTTGACT
ATATGAAGTGTCCCACTTTTACCCCAGGATGCTGGAAAATGTAGGAAAAT
GTGTGGGGTAAAATTGCTGTAATTTCAGcaatattgaaaaaatcattATG
GAAATGCCTCTGAATCATTAAGTTGGTTGCAACTCATAAAGTATTATCAA
GTTTGGGGAGATTTTGATCACTCTTTGAGACAAAATATTTATGTGTCCCA
TTTTCACACCAAATTGTTGGACActtttttattagttttaggATCATCAG
GATACTCAGGACAAAAACAATTAGTGCTATTTTAATCACAGTACtttgta
agaaaatatagcaaaaAATCACACCTCTACTACTAATATTCTCAAAATTA
TTTAAGAATTAGTCAAAATTGTTCTGTAATTACCCCAGTTGACTACTGTA
TACCAGAGTTTTTAGTTGCATCAGTCTCAGaaattagaaactttgtatgt
ctgaggtaaaaaaaaattctaaaatttagTCTTTAGTTTTGATACACAGG
TTAAGAAAACAGCAGTAAATGGCTGAATTATGCTTTCAAGTTGAAAGTCG
ACTGAAAATTTATATATTTGGCAAAAGATTTGCTTGTTTTCTTGCGGAAA
GCAAAAGATGGCCCAAAAAATCCTTGTGCTACATGTTTAAAGCTGACAAT
AAATTTGTTATTGGGCAAGAATTTACTTTTAAATGAACTACATATTAGGA
AATGGCTCTAAACAAGCCTTGAATGTGGATTTTCAGCAAGCAAATTATCC
TTATACCCAGTATTGGATTTTAGGTCTAAAaagatataatttttattatt
tgaacatcaattttttttcattttgtttttatgtttatatcCAGTAGCAC
CTGAAGAAAGGAAGTTGTGCAAGAAATGTGGAAAATATTATCCAAAggaa
tcaaaattttgtatgGAAGATGGGACTCTTCTTACAGAACTACAACCTTT
GACTGAAGGTATAAATTCATTTGATTTTCTGTCTTCAAATAAACACAAAA
CAGCCAGTTTTGTACAGTGCTTGATAAAACTACAAGaactcaaaattttt
gaaattttttgtacaGTAAATCATACTTTTGATAATATTGATTTATATTA
caattaatttaaaatatttattcaaattgACATTGATATAAAGCCTACTT
TCATCAGCAGTAAAAATAAACCAGGGAAAGAGGGGTATTACAAAATAGGA
ATGTTAGTATATTAGGTAAAGACGGATGGTGAAAGGCCCTGATTATGATT
GGCAAAtgataaaatcttaaaattatagtaatatttttgaagataacacg
tTACTTCTTAAGTTAAATTTGCAGTATATACAGTAAACAGCTTGGATATA
TatcaatttttagtattttaaagaatcttttttaattttttgtacatATT
CACATCTGAAGGAAGAAAGTATTGTCCAAAATGTGGAGCCAATTATCCAA
AAGAATCCAAATTTTGCATGGAAGATGGAACACCTCTCAAAGAACTAAAA
ACTGAAGGTGTTGTAAATTCATTCATACCTACCTGTACTGTACTTGCATA
TGCACATAATTGATattcaaaagaatattttctaaaaacatCAAGAATGA
TTTGAACTTTTTTGCCTAGTAGATTACTCTGCATTCAAAATCAGACCCCT
ATTTTGAAAGTTACACTATCAATCAAATTTCTCATAATTGTCTTTAAATG
TTTTAACAAAAAGCTCAAAATTCTACACCATAAATGCCATCATTTATGTT
TTGGTCTTATGTTATTAGTTACAGCTGAAGAAAGGAAGTATTGTCAGAAA
TGTGGAAAAGACTATCCAAAGGAAACCAAATTTTGTGAAGATGATGGAGC
AGGTCTAGAACTTCAACCTATCAATGAGGGTAATTGCCTTATACTTAATT
AAACCTACCTGAATGTCCTATGAATAAAGCGCTGTTCCACCCATTGTGTA
TTCGTTCATCTCTTTTGCTTTTCTAtcttttgtttataatttgCACAAGC
TAAAAGACCAATggtcaattttaatttgtaaTGCCACACCAGATTTATGA
TTCATAGCTTGATTGTATTAAGCTTTGGTATCCAAGTCTTAGATTTTCAC
ACTTCTGGAACCCTCTTGCCCCTGACTTGAGGTGGGGGCTAAAAGGTCAA
GTGACCTCTGttacctgattttagcctgtgaTCAGGGCAAGGATCCTTGA
TGTAGGGTTCACCTTGACTTTATGTCATAACCATGATGTCCTTTGTTCTG
TTATTAAATGAAACTGTACAAAATTTTTCCCTTAAGTTAAAAAAGGTGAT
AAGAACAATGGACAAGAAGATAAGAACGATGGACAAGAAGATATGGAGAT
ATGCGAGGAGGAAGTTCAacacaatcaaaacaaaatggtgaaattagttt
tattttttttcagtgattaaTACAATACTTGCAAACTTTTAAAGTAGTAG
ATATAAACAGTCTAGCCCCACAGTATCAGGTTTAACATCATATAGtcaat
aaaatataaaacacTGCATAGTActgcaaatagggaaatttcagtTGGTC
GTTAAATTTTTGAGTGTAACGAACAGAGGGTGTGGCGGAACCATCTTAGA
AAATTTTGTAGGTCATTCctttagattggctaaacacctattttaATTTA
AGTTAACTGTTCCTCTTTTAATTAGAAGCGCTATTAAGTATTTATCTAAG
CctctaatcttcaaattttaactgGACAAAATTAAAAACTGAGCCTCAGA
ATGACAGgtagaaactacaaaatgaTCTGTAATTACTGGTCACTGGctgt
tatttgcagcactgacaTGCTATATCCACTGTAATCTCTTACTACTTGAC
TGGATCTGGCTTCCTATAAAAAAGGAAGTTGTTATGACAGACTAGTCAAC
TTTAAAGCTGAACATACTTCCATGACAAATCTGTGAGTATCTAGCCTATC
TAGTGTGTAAATGAATATGATATCTTGCTTAGATGCTCAGACCTTAACAG
ACAGGAAAAAATGAATACAAGACCTAAACATTCAATATTTAATTGCTTTA
CATTGCTGTCGTTTAAAATTTTTATGTACTATTTTTATATTACaataata
tgatttttttactaTTTAAATTCTTTATTTAAGGCACAAAAACAAGTTGA
TAACCATCAAACTTCATTTGGTAGCAATGCCAATGACAGTTCCAATGCTC
AATATGCTTTGAGCTTTCCAAACGCAAAGTAAGTCTTAGTAAAAGTACAT
GtgtaattttttagtttttgaaataaaataaaaactacaATAAGATAATA
AATTTGGTAATaacttatatattttttaacctATGCATTTACACTTTACA
TCTATCTCACTTGTTAGGTCTTTTTGGGACGTACAACTTTTATTGCATAT
AAATTTATATCATTCAATCTTAGCACCCAAGGTATCAGTGAAAACACTAA
ATGTAAGAATCAGCACATTGATAACGATACAGAAATTGCTGAAGAGAAGC
CTAGTGAGGAAGGACAAAACAGCAAAATTGTTGGCAAggaagaaaataaa
tcagagAACGACTCTAAAACCTTGCTTCAGACTGCTGAAGAATCTGAACT
ATCAAAGTAAGAActacattttttgtttacttataCCGATTTTATGAATA
TTGCACCAATAACACCATCAGCAGTTGCAGTATGGTTATTCAGAAATTAT
TGCTAATTCTGAATGAAAATTGTGTCATCACAAGCgacttcaaattcaaa
atggaaCGCTCCAATGAAACGTTCATTGAATCTAGTTTAAGAACCTATGC
ATTTACACTTTTATATATCTATCTCAGTTATTAGTTCGTtgagcctcaag
ttccttataaacgtgttctttataaaaaaacgtgtattacacTAATAACA
CCATCAGTAGTTGCAGTAGGGTTATTCAGAAATTATTGCTAATTCTGAAT
GAAAATTGTGTCATCACAAGCgacttcaaattcaaaatggaaTGCTCCAA
TGAATCGTTCATTGAATCTAGCTTTAAAGAACCTATGCATTTCCACTTTT
AAGTATATATCTATCTCAGTTATAAATTAGTTTGTTGTGGGATATACCAA
TTTTATTGCATATAGATTTATATCATTCAATCTTAGCACCCAAGGTATCA
GTGAAAACACTAAAGTTGATAATCAGCACATTGATAACGATACAGAAATG
GCTGAAGAGAAGCCTAGTGAGGAAGGACAAAACAGCAAAATTGTTGGCAA
GGAAGAAAACAAATCAGAGAACGACTCTAAAACCTTGCTTCAGACTGCTG
AAGAATCTGAACTATCAAAGTAAGAActacattttttgtttactcagtTA
ATACTATAAAACATTCTAGAACGTTCTCATTTACGTTCTCATCagtatac
attttttatttactaaTACTAATTTTATGAGTATTACACCAATAACACCA
TCAGTAGTTACAATATGGTTATTCAGAAATTATTGctaatttttgaatga
aaattgtgtCATCACAAGCAACCTTCAATACAAAACGGAACGTTCCAATG
AATTGGTCATTAAATTATTCaatcattctattttatttactAGTTTAAGA
ACGTTACTGAacattcaaaatgtttttcagACGTTCTTATCAAGTTGAAT
TCAACCTTTGAACGCTAAGGATTGTTCTGGAGTGGAATGTTTGAGAACAA
CTGAAAACGTTCTGGAACATCCAGGAaagctatgggatgggtttgcAAAC
TTTCAGAATGTTCCATTTCATTTGTACTTTAAATCTTTTGTGATGACACA
ATTGTCCTTAACTCGATGAATATAGCTGTGATATACCATTGTTTCTAGCC
TCTTATTTATGTACTTTATTGGTAGACTTAAAGAAGAACGAAATCAAATT
GAGACCCCNAacgctatgggatgggtttgcAAACTTTCAGAATGTTCCAT
TTCATTTGTACTTTAAATCTTTTGTGATGACACAATTGTCCTTAACTCGA
TGAATATAACTGTGATATACCATTGTTTCTAGCCTCTTATTTATGTACTT
TATTGGTAGACTTAAAGAAGAACGCAATCAAATTGAGACCCGAACATTGT
TCCAATCAAAAGAGACTAATGAGCATCCagtgaaaaaagaaaagcaagca
ACAGAAAATGATTATACAAAGGCCAAACAGAATGGTTCAAATGCACAAGT
TAAGAATGAAAACACATTCAACATCCAAGTGTCTGATGAAAAGACAAATC
TAAggtattttgaaatttgcctGGCTTTTGTCTGCCCAAACGGTTGCCCC
TAAACTTGAGACTTCACAAAACAGGACACAAAGAAATCCTTaaatttgca
aataaaaatttacaattttaaaacaattaaaTTCTCCTCTGTTTTGTTAA
GTTTTGTTATTCAATCACTTGTTATGGCTTGTTTGTTGTGCAggattaat
tttatttttaacttttagtgAGAAAACTAGCAGTGAATCTAGTGGACAAT
TATCAGATGGTAGAAACaacactgaaaatgaaaaaggcAAGAGGGAGCAA
AATGAAGCCAAGTGAGAGATCTTTACACTATCCAAAGTTATTtagctttt
ttctttattgaactAATTGTAAGATGTTAAGATATACACCTGACACACAC
TACACTTTTggttacttttttaaatttctattttataatttttattcttC
AGATATTTTATTGGACAATGTTCAAAGAATAGGATTATTCCCACTAAGTA
ACTAAAAATCATTTTCAGGATTATATGGATCCAATAATTAATTAATATCT
CGTACATCAAGGGTAAACCAATCCAAGGAGAAACCGACCAAAGAAAAGGa
ttccaaagaaaaagaagaacaaaaagagaaaaaacaagATAATCAAGCGT
AAGTATTTTTGCCTGATAAAAAGGACAATTCTTTTTGATTAATTACATCC
ATTTGGATTTTAATTAAGGagttttatatttaaaaatgtGAGAAAAGTGA
GAAAAGAATGATGTAAAGGAGCTTTCTGTGTCAGAAACTAGTTTTTACCT
TTTTGGGTATCTATTGAAATTGGACGATGGTGTTGGACAATGATTGAGAG
ATCATCTGACAGTGTGTGTGGTTCATACGcttcttttctattttaatttC
ACTACTAGGTCTGAAAACATCAATTGTGGACAcagttgatgttttttatc
cacagtcgatcatttttatggacagtttttttctttttcttgacaGTTGA
TGCCTGGAAATAGACAGCCAATACTTTTCATGAACTGTCAAGATTTAATT
GACTGCCAATGTCTGATATCGACTGTCGATTAGCTGATATTGACTGCCAA
TATCTTACCTTGACTGTCATTCAAGATCAGCTATTAACATTCAAATCTTT
TTAAAGGTAATTAATATTGATTAATTAATGTAATATTATGATCATTTCTT
TTCAGAGGAGGAAAAGAGCAATCAAAAAAACAAGATCCACTCACCAAAGA
TCAAAATGGTGTAAAAGAAGGGTAGgaagttatgaaaaaaataaaacttt
taaaagttttagtGAAATACCCTTAAGAAGGTTATTAGATGTAAGCTGAT
AATTTGTGATTtcccaagcgatttaaagtacctgaaaatcagaCCGGTCT
TGGTCCTGTATTACGAGCAGTCTAGTAGcagtcaaatttttgttttagat
cgGCCTTCAGACCTTCTAGAAATTTGATCTCTAATGGTCCTGGCCGCTTC
TAGACGCTCATGACTGCTCGTTAGACTGGTCCAGACAGCTAGTTAGTGAT
TTTTAGTAACAATCACATCAAAAAAATCTTGTAAGAGGATGTCAAATGGA
CAATCGAGGCCGGTCTGGGATCGGACGCTTCGCAGGGGCAGCTAAATTAA
CTAGACTCGAAGCGgccttttggtaaattttaCAGTCATTTACCAGCCCT
TAAAAGACCGCCTAAAGACCGGTcccattttcaggtacttttaaatcgct
ttaggagTCACATCCTTTTCTGATTTGATTAGAGTGACAACTAGAAGTAT
GGCAAATAAAACAGAATCAAATTCATCTGCGCCACCAAGTTATGCAAAAG
CGACTGCAAGCTCAGCAGCTAAAAAGAATGGGTTTGTCATTTATCTTTCT
AACAGCCATACTACTATACTTATTTTGGTGGTAcctattttttgtatttt
agccGACTACATTGTAAATAAGTTACCAAAAAAAACTGGCCTTCATTTGA
CCTGTGCTGGTTGTTCTAACTTTGACTGGTCATGGTTGTTTGTTAGCTTT
TCTAGTAACAATTACTTAAGAAATTGTTTAAAAGGATGTCAATCGGTCAA
TCAAGGCCATTCTGGGACAAGTCCAATTCTTGGAAAAGGTCCTGCGAAAT
GACTGCTAAATTAATTGAACTCATAGCAGCCTTTCGAAgtgttttcaata
aatttttacCAGTCATTTACTAGCCCCTAGAGTAGATTGTCCTTAGAATC
ACTTGGGTGTGACATATGataaaaataatgtcaaaaaaataaagacctat
acagaaaatgaaaaatttatataATTTCAAGTATTTACTAAGGTTAGAGT
TTATTTGTCTCCTTTAACACCTGTTAACACTTAAAACTGGAATACAAACT
CACTCACATTCTTTGCTTAACTGATtgtgaaatttaatttatagTGCCAA
TGATCAGAACCAAAAGGCTCAAGCTAATGTGAAAG

Coding sequence (CDS) from alignment at scaffold_71:628289..639973+

>TCONS_00072118 ID=TCONS_00072118|Name=TCONS_00072118|organism=Clytia hemisphaerica|type=CDS|length=1569bp|location=Sequence derived from alignment at scaffold_71:628289..639973+ (Clytia hemisphaerica)
ATGGTCGAGAAGAAACTTATTTGCACAGTATGTTCGGAACAATATCCTGC
CAATGCAAAGTTTTGCTTGAAGGATGGACCATCTTTGAAACCCCTAGAAG
AAAGTGTAGCACCTGAAGAAAGGAAGTTGTGCAAGAAATGTGGAAAATAT
TATCCAAAggaatcaaaattttgtatgGAAGATGGGACTCTTCTTACAGA
ACTACAACCTTTGACTGAAGGAAGAAAGTATTGTCCAAAATGTGGAGCCA
ATTATCCAAAAGAATCCAAATTTTGCATGGAAGATGGAACACCTCTCAAA
GAACTAAAAACTGAAGTTACAGCTGAAGAAAGGAAGTATTGTCAGAAATG
TGGAAAAGACTATCCAAAGGAAACCAAATTTTGTGAAGATGATGGAGCAG
GTCTAGAACTTCAACCTATCAATGAGGTTAAAAAAGGTGATAAGAACAAT
GGACAAGAAGATAAGAACGATGGACAAGAAGATATGGAGATATGCGAGGA
GGAAGTTCAacacaatcaaaacaaaatgGCACAAAAACAAGTTGATAACC
ATCAAACTTCATTTGGTAGCAATGCCAATGACAGTTCCAATGCTCAATAT
GCTTTGAGCTTTCCAAACGCAAACACCCAAGGTATCAGTGAAAACACTAA
ATGTAAGAATCAGCACATTGATAACGATACAGAAATTGCTGAAGAGAAGC
CTAGTGAGGAAGGACAAAACAGCAAAATTGTTGGCAAggaagaaaataaa
tcagagAACGACTCTAAAACCTTGCTTCAGACTGCTGAAGAATCTGAACT
ATCAAACACCCAAGGTATCAGTGAAAACACTAAAGTTGATAATCAGCACA
TTGATAACGATACAGAAATGGCTGAAGAGAAGCCTAGTGAGGAAGGACAA
AACAGCAAAATTGTTGGCAAGGAAGAAAACAAATCAGAGAACGACTCTAA
AACCTTGCTTCAGACTGCTGAAGAATCTGAACTATCAAAACTTAAAGAAG
AACGCAATCAAATTGAGACCCGAACATTGTTCCAATCAAAAGAGACTAAT
GAGCATCCagtgaaaaaagaaaagcaagcaACAGAAAATGATTATACAAA
GGCCAAACAGAATGGTTCAAATGCACAAGTTAAGAATGAAAACACATTCA
ACATCCAAGTGTCTGATGAAAAGACAAATCTAAgtgAGAAAACTAGCAGT
GAATCTAGTGGACAATTATCAGATGGTAGAAACaacactgaaaatgaaaa
aggcAAGAGGGAGCAAAATGAAGCCAAGGTAAACCAATCCAAGGAGAAAC
CGACCAAAGAAAAGGattccaaagaaaaagaagaacaaaaagagaaaaaa
caagATAATCAAGCAGGAGGAAAAGAGCAATCAAAAAAACAAGATCCACT
CACCAAAGATCAAAATGGTGTAAAAGAAGGAGTGACAACTAGAAGTATGG
CAAATAAAACAGAATCAAATTCATCTGCGCCACCAAGTTATGCAAAAGCG
ACTGCAAGCTCAGCAGCTAAAAAGAATGGTGCCAATGATCAGAACCAAAA
GGCTCAAGCTAATGTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044791XLOC_044791Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072118-proteinTCONS_00072118-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072118-exon-scaffold_71-1491911889:628289..628513TCONS_00072118-exon-scaffold_71-1491911889:628289..628513Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:628289..628513TCONS_00072118-exon-scaffold_71-1510915933:628289..628513Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:628289..628513TCONS_00072118-exon-scaffold_71-1575043694:628289..628513Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:633083..633196TCONS_00072118-exon-scaffold_71-1491911889:633083..633196Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:633083..633196TCONS_00072118-exon-scaffold_71-1510915933:633083..633196Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:633083..633196TCONS_00072118-exon-scaffold_71-1575043694:633083..633196Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:633650..633745TCONS_00072118-exon-scaffold_71-1491911889:633650..633745Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:633650..633745TCONS_00072118-exon-scaffold_71-1510915933:633650..633745Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:633650..633745TCONS_00072118-exon-scaffold_71-1575043694:633650..633745Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:634007..634117TCONS_00072118-exon-scaffold_71-1491911889:634007..634117Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:634007..634117TCONS_00072118-exon-scaffold_71-1510915933:634007..634117Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:634007..634117TCONS_00072118-exon-scaffold_71-1575043694:634007..634117Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:634525..634625TCONS_00072118-exon-scaffold_71-1491911889:634525..634625Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:634525..634625TCONS_00072118-exon-scaffold_71-1510915933:634525..634625Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:634525..634625TCONS_00072118-exon-scaffold_71-1575043694:634525..634625Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:635372..635466TCONS_00072118-exon-scaffold_71-1491911889:635372..635466Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:635372..635466TCONS_00072118-exon-scaffold_71-1510915933:635372..635466Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:635372..635466TCONS_00072118-exon-scaffold_71-1575043694:635372..635466Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:635662..635844TCONS_00072118-exon-scaffold_71-1491911889:635662..635844Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:635662..635844TCONS_00072118-exon-scaffold_71-1510915933:635662..635844Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:635662..635844TCONS_00072118-exon-scaffold_71-1575043694:635662..635844Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:636375..636557TCONS_00072118-exon-scaffold_71-1491911889:636375..636557Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:636375..636557TCONS_00072118-exon-scaffold_71-1510915933:636375..636557Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:636375..636557TCONS_00072118-exon-scaffold_71-1575043694:636375..636557Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:637298..637492TCONS_00072118-exon-scaffold_71-1491911889:637298..637492Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:637298..637492TCONS_00072118-exon-scaffold_71-1510915933:637298..637492Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:637298..637492TCONS_00072118-exon-scaffold_71-1575043694:637298..637492Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:637707..637799TCONS_00072118-exon-scaffold_71-1491911889:637707..637799Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:637707..637799TCONS_00072118-exon-scaffold_71-1510915933:637707..637799Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:637707..637799TCONS_00072118-exon-scaffold_71-1575043694:637707..637799Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:638050..638136TCONS_00072118-exon-scaffold_71-1491911889:638050..638136Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:638050..638136TCONS_00072118-exon-scaffold_71-1510915933:638050..638136Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:638050..638136TCONS_00072118-exon-scaffold_71-1575043694:638050..638136Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:638694..638759TCONS_00072118-exon-scaffold_71-1491911889:638694..638759Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:638694..638759TCONS_00072118-exon-scaffold_71-1510915933:638694..638759Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:638694..638759TCONS_00072118-exon-scaffold_71-1575043694:638694..638759Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:639271..639369TCONS_00072118-exon-scaffold_71-1491911889:639271..639369Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:639271..639369TCONS_00072118-exon-scaffold_71-1510915933:639271..639369Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:639271..639369TCONS_00072118-exon-scaffold_71-1575043694:639271..639369Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1491911889:639933..639973TCONS_00072118-exon-scaffold_71-1491911889:639933..639973Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1510915933:639933..639973TCONS_00072118-exon-scaffold_71-1510915933:639933..639973Clytia hemisphaericaexon
TCONS_00072118-exon-scaffold_71-1575043694:639933..639973TCONS_00072118-exon-scaffold_71-1575043694:639933..639973Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:628289..639973 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.353001	0	0.476392	0.523217	0.152309	0.298175	0	0.624481	0	0	1.2045	0	0.606764	1.29742	0.37115	0	2.02262	3.22685	0	0	0	0	4.34451	0.511456	0.386569	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR025874DZR
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072118 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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