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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073807 ID=TCONS_00073807|Name=TCONS_00073807|organism=Clytia hemisphaerica|type=transcript|length=3142bp
TGTGTATACAACATAATAACACGGGGGTATATTTTCCCCGACGTTTTATA
CAGATTGTTTTGCAATTTGACTTTTGGCTTAATTTCGTTGAAGGGAGTTC
ACAATGGATGAATTGTGCGTTTTGTTGTTGCGTTGGTATAAATTGGCCCA
AGTTCGGAGGCTCGATGTCAACCCAACCACACCTGCGAAGAAAAGGCTTG
AAATTCATCATACGCAACCATGGTCAAGAAGGAAGAAATCAATACCATCC
AATACTACAGTTTGAAAGCTGTCGATGGtgaaaaagtgaagaaattacTT
CGAAACACAATCAATGCTCTTTCAGAGAAAGAATTTTCATCTGAAGATGG
TTTGACCAGGTTTGTCACAGACGTTCTTGATACACGTTCACTCGCTGAAT
TATTAATCTATGTTTCACAGCTACCAGTTTTTAGTGAGGAATTCTCGCAA
TGTTTGACCTACGATTTGGACATCCTTGCTTTGATGAAGAAATTCAAATA
TTACAATAACCTCCCTCTGAGTCAAATCCTCTGCCTGGTGCAGCAACTGC
TGGAGAAAAACAAAGCCTTCAATGACACTTTCGACAAGTCATTCTCCAAA
CTGGTCAAAAGCTCCGATGAAAACCTCAAGTTGAAATTTAAGGATTTTTG
CAATACAGAGGCAACTAAAATGTCGACTGGCTTTCTGTACAAAGAAAATC
AGACCAGCCTCGAGACCATTGACCCACACGCAGTCTACCCAACCAGTATT
TACCGACATTGCAATGGATTGACGTTGGCAGCAGCAGATTCGAAAACCAT
CGAAGCGGTGATGAGCACTTCAATAACAACATCTATCAAAATCACTAATA
AGGTGCTTCATCCTTCAAACAAGACATTGATCAACACTTACCTACACTTT
GGGCGTTGCGTCGCCATCATTGACGATAAAGTCATCCTGCACTATGGTGA
AGAATTGCAAAAATATTTCGATCATTTCGGTGTTGAGTTGGTGAATTTGA
TCCATGGTGGTAACGAGGTCGACAAAGATATCAAGAGCGTGGAGAAGATT
TTAGTGCAGCTGAAACAAAATGGTGTGTCGAGAAACGAACCTATCCTTAT
TGTTGGCGGGGGCGTTATCTCAGATATTGGTGGTTTTGCAACCGCCCTTT
ATCATCGAAATACGCCCTACGTCATGTTGTGTACATCCATTGTATCTGGT
ATTGACGCCGGACCTTCACCCCGAACATGTTGTGATGGATTCGGGTTTAA
GAATCTGTACGGTGCATATCACCCGCCCATCTTGACGCTGACCGATCGTT
CTTTCTTCAAAACACTTCATGAAGGCTGGATTCGACATGgAATCGCTGAG
ATTATCAAGATGGCTGTTGTAAAAGACAAAAGTTTATTCGAATTAATTGA
GAAGGCCGGACCTCGATTGATTCGTACGAAATTCGGAACGGTTGGCAACA
CGGACGCCGAATTCGAAACGTTGTGCGATCTTATCATTGGTAAAGCTATG
GAAGGATACGTTCGTTCGGAATACGGAAACCTTTGGGAGACACATCAATG
CCGACCTCACGCTTACGGCCATACGTGGTCGCCTGGTTACGAGCTTCCCG
CTGGCATGCTTCACGGACACGCTGTTGCCACATGTATGGGGTATGGAGCT
TATTTGGCAAAGTTGGAAAACTTCATCACGGCAGAGGAATGCAGCCGTAT
TTTACGTTTGATCAGTACAATGGAGTTATCCCTTTGGCATGACATTATGG
ATAACCATGATTTGGTTGCTGCCGCAAACACCAAGGTCATCGAGAAAAGA
GGTGGCAATCTTTGTGCACCAGTACCCAAAGAACTTGGTCAATGTGGTTA
CATCAACGAGTTGTCACGTGATACCATTAACCAGACATTGGATGATTACA
AAATGCTGTGTCAGCAATTTCCACGATCAGGACGAGGAGTTGATGTACAC
TGTCGCGATGTAGGGCTGGAAGATCCTTCTACTGTGGCAGGTTATGGAGT
AAATGATGTTTTGCAATCTAATGGTGCACCAAAGCATCCAAACGGAAGTG
CAGAATCCAACCCTCCGTCATCTTACTCCGAATGGATCAAAACGGTTCAA
ACAGAGCGGAACAGTGAATGGCAAATGAACGTCACTTTCCAAAAAGCCCT
GGATACTGAATCCCCTCCTGATTTCAATCACTTCAAATTGTTTCATGATG
GCGTCGAAACATACGCCATGGCTCAAACGACCATCCCTTCAAAAGGTGTC
CAAAATATCGCCAATTTGACGCAAAACAACGAAATGTTTTCTCCCTGCAT
GGTTGGTTCGCTTGAGAGTCAATTCCTAAAAATGCAATGCCAAATCAAAG
GAGCTCGCAACGTGCTGGATGTCGGTACGTTTACTGGAATGTCTGCTTTG
GCGATGGCTGAAGGAATCCCCGATGATGGTCAAGTTGTCACTTTAGAATG
TGATGAAAAAATTGCTGACGTTGCACAACAAGCTTTTTCAGCGTCGAAAG
TCGGTCACAAGATCCGTCTCGAGTTAGGAAACGCCCTTCAAAGTATGAAG
AAATTGGCAGCAAACGGCCAGAAATTCGACGTCATTTTTCTTGACGCCGA
TAAAGAGAATTACATCCTTTACTACGATCTAGCCATGGATGAAGGAGTGT
TAGCCGAAGGTGGAATTATCTTAGCTGATAATGTGTTGTGTTCTCTTTTG
TACGACAAGAAAGATTTTCGAAGTCAGAAGCTTCACGAGTTCAACCAACA
TGTGAAGAATGACGATCGGGTGGAGCAAGTTGTTTTGACCGTACGGGAAG
GGATCTCTATCATCAGAAGGCGTTAAATAAACCGCTCATTCATACAGACA
CATTCAGAgaagaaattttagatttcaattACATATTCCAAACAACATTA
TTATTTTCAcgttattttttgtaaataattttttttgaaggttTCACCAA
ATTCTTGCATCAGCATTTTTATGTCACTTCTTTTATCAAAGAACAGAAAA
ATTTTNTTCTTTTCTTGCATCAGCATTTTTATGTCACTTCTTTTATCAAA
GaacagaaaaattttgaattctaaATTTTGTAAATGATTTTCCTTTATAT
CTGAAGTAATCATTGTCAAGCAGTTAATAGGTTGTATTCTGT Run BLAST on NCBI protein sequence of TCONS_00073807-protein >TCONS_00073807-protein ID=TCONS_00073807-protein|Name=TCONS_00073807-protein|organism=Clytia hemisphaerica|type=polypeptide|length=868bp
MVKKEEINTIQYYSLKAVDGEKVKKLLRNTINALSEKEFSSEDGLTRFVT
DVLDTRSLAELLIYVSQLPVFSEEFSQCLTYDLDILALMKKFKYYNNLPL
SQILCLVQQLLEKNKAFNDTFDKSFSKLVKSSDENLKLKFKDFCNTEATK
MSTGFLYKENQTSLETIDPHAVYPTSIYRHCNGLTLAAADSKTIEAVMST
SITTSIKITNKVLHPSNKTLINTYLHFGRCVAIIDDKVILHYGEELQKYF
DHFGVELVNLIHGGNEVDKDIKSVEKILVQLKQNGVSRNEPILIVGGGVI
SDIGGFATALYHRNTPYVMLCTSIVSGIDAGPSPRTCCDGFGFKNLYGAY
HPPILTLTDRSFFKTLHEGWIRHGIAEIIKMAVVKDKSLFELIEKAGPRL
IRTKFGTVGNTDAEFETLCDLIIGKAMEGYVRSEYGNLWETHQCRPHAYG
HTWSPGYELPAGMLHGHAVATCMGYGAYLAKLENFITAEECSRILRLIST
MELSLWHDIMDNHDLVAAANTKVIEKRGGNLCAPVPKELGQCGYINELSR
DTINQTLDDYKMLCQQFPRSGRGVDVHCRDVGLEDPSTVAGYGVNDVLQS
NGAPKHPNGSAESNPPSSYSEWIKTVQTERNSEWQMNVTFQKALDTESPP
DFNHFKLFHDGVETYAMAQTTIPSKGVQNIANLTQNNEMFSPCMVGSLES
QFLKMQCQIKGARNVLDVGTFTGMSALAMAEGIPDDGQVVTLECDEKIAD
VAQQAFSASKVGHKIRLELGNALQSMKKLAANGQKFDVIFLDADKENYIL
YYDLAMDEGVLAEGGIILADNVLCSLLYDKKDFRSQKLHEFNQHVKNDDR
VEQVVLTVREGISIIRRR Run BLAST on NCBI transcript from alignment at scaffold_98:8005..18570- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073807 ID=TCONS_00073807|Name=TCONS_00073807|organism=Clytia hemisphaerica|type=transcript|length=10566bp|location=Sequence derived from alignment at scaffold_98:8005..18570- (Clytia hemisphaerica)
TGTGTATACAACATAATAACACGGGGGTATATTTTCCCCGACGTTTTATA
CAGATTGTTTTGCAATTTGACTTTTGGCTTAATTTCGTTGAAGGGAGTTC
ACAATGGATGAATTGTGCGTTTTGTTGTTGCGTTGGTATAAATTGGCCCA
AGTTCGGAGGCTCGATGTCAACCCAACCACACCTGCGAAGAAAAGGCTTG
AAATTCATCATACGCAACCATGGTCAAGAAGGAAGAAATCAATACCATCC
AATACTACAGTTTGAAAGCTGTCGATGGTGAAAAAGTGAAGAAATTACTT
CGAAACACAATCAATGCTCTTTCAGAGAAAGAATTTTCATCTGAAGATGG
TTTGACCAGGTTTGTCACAGACGTTCTTGATACACGTTCACTCGCTGAAT
TATTAATCTATGTTTCACAGCTACCAGTTTTTAGTGAGGAATTCTCGCAA
TGTTTGACCTACGATTTGGACATCCTTGCTTTGATGAAGAAATTCAAATA
TTACAATAACCTCCCTCTGAGTCAAATCCTCTGCCTGGTGCAGCAACTGC
TGGAGAAAAACAAAGCCTTCAATGACACTTTCGACAAGTCATTCTCCAAA
CTGGTCAAAAGCTCCGATGAAAACCTCAAGTTGAAATTTAAGGATTTTTG
CAATACAGAGGCAACTAAAATGTCGACTGGCTTTCTGTACAAAGAAAATC
AGACCAGCCTCGAGACCATTGACCCACACGCAGTCTACCCAACCAGTATT
TACCGACATTGCAATGGATTGACGTTGGCAGCAGCAGATTCGAAAACCAT
CGAAGCGGTGATGAGCACTTCAATAACAACATCTATCAAAATCACTAATA
AGGTATGCGAAGATCCTGTTTTGTCTTCTGCTCCAAGATATTCCTTTTTA
TATGTTTATTCCATATAGTATACTTTTATTCTTGATCAAGGCCAAATGAT
TTGTAAGTTACCAAGTGAAACGATCCAAATTGCAAATACTTCTTCAAGTA
TGTCTTAAGACAAAACACTTTTAACGGTTTAATAAGTGGTAGAGTCTAAC
GGCTGTGAACCCGTTTGTGAAATTTCTTTTACTGTACTTATTTCTTAGAA
ATGGGGTATGTCTTGGACTATAGCATAGTCTAGTGCGTAAGGTGACCTTT
TGCCTCTTAACTCGCCAGTTAAATGAGTTTGGGAGTTTGTNGACCAGGTT
TGTCACAGACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATG
TTTCACAGCTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTAC
GATTTGGACATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCT
CCCTCTGAGTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACA
AAGCCTTCAATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGC
TCCGATGAAAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGC
AACTAAAATGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCG
AGACCATTGACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGC
AATGGATTGACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGAT
GAGCACTTCAATAACAACATCTATCAAAATCACTAATAAGGTATGCGAAG
ATCCTGTTTTGTCTTCTGCTCCAAGATATTCCTTTTTATATGTTTATTCC
ATTTTATAGTATACTTCTATTCTTGATCAAGGCCAAATGATTTGTAAGTT
ACCAAGTAAAACGATCCAAATTGCAAATACTTCTTCAAGTAGGTCTGATA
TCTAAAGACAAAACACTTTTAACGGTTTAATAAGTGGTAGAGTCTAACGG
CTGTGAACCCGTTTGTGAAATTTCTTGTACTGTACTTATTTCTTAGAAAT
GGGGTATGTCTTGGACTATAGCATAGTCTAGTGCGTAAGGTGACCTTTTG
TCTCTTAACTCGCCAGTTAAATGAGTTTGGGAGTTTGTTTGCTCCGTCTC
TGGATTCTTCGGGAAGTGTCTTCTGTCTCCCGATCCCTAGCCTGGTTAAC
CAAGCCGGTTTTTACAAGGCCAAGAAAGATACGGCTGAAGACCATATAGC
ATTATCGGTGCTTTAATGATTTTTATGATGTACGGAATTTTAATTTTGCC
TTGAAAAAACTGGCTTACGCGAAGCGCGCGTTCATATTTTGAACGCAGAA
GTCGGTGAGACTCGGCGAGCATTTGGCCTCTTCTAATTGGTCATAATACA
CCATGTGATAAGAAACGAAATTTTTCGTTTGTTTTGAAAACGCTTTTCAC
TTCTCAACGAAAAACTTTTTAAACATATTTTATTCTGTACTTTTTGCATA
AAAAGAAAGATATGTTTTTCTCTCTCCCTCTTTTAATTTGCAAAACCTTT
ATATAACTGAATGAAAGAGAAGTTCATTAAATAGGGAGGAGGGTGTGTTT
ATTTAACAAATTCCTTATTTTTATANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTTTTTGCTTGGAAAAGCTTGAAGCACTCAATCTAGCCCTTC
GGGATTTACAGAAATCTGTACCGTTACCGTAGCTGCGGCAGACCATGAAG
GTCAAGGTGTCTTAACAATGTGTTGACTGACTAATGTCGTTCTTTGGGAA
GTTGTAATATCGCCGCATTTTTCTTTAACAGAGATTGCACGGGTCAAAGT
TACGAAATATGAGCAATGAGGCATTTTACTCCAAAACAGATTTTGACACA
TCATGTCAAAAGCTAGTAATTTGACCTGATAATCGAATCAAAAATGAGAA
ATCAAGTATTTGAAAACTCCCAAAATGGGAAATTAAACAAAGAGTGCCTC
TGCTGTATTTGAAAGATGACGTAAGATGAGAAAGAAAAGTACTATCCTAC
ACAACAGGGAATATATAATAGTTCCTGTGTTGTTATAAAGAAACTCGTGT
TAGGTCAAATAGGACGACACTGCATTTACTAGTCGAAGATTCAGGCCCGA
GAATATCCAGGAATTAAGTTTTTTTGAACTGCCAATTTATTTTGTCACCC
AGGTAATAAAGGGTTTTAAGCATCACAGGGGCAGATTTGAATTGTCTTTA
ATAAAAATTGCAGTTAAAGCCTTCGTAATTTCACAAGCACCATGCTTGTG
TAATCAAAGTAATTGCCATTGAAGTTAAGCCTAATTTTGGCCCAAACGCT
GGGAAACCAGGTTAGAAGCTGGTAACATCGTGTATAAGCGGTTTGCATTT
GAATTACCAATTGTTCATCTCTCAGGTGCTTCATCCTTCAAACAAGACAT
TGATCAACACTTACCTACACTTTGGGCGTTGCGTCGCCATCATTGACGAT
AAAGTCATCCTGCACTATGGTGAAGAATTGCAAAAATATTTCGATCATTT
CGGTGTTGAGTTGGTGAATTTGATCCATGGTGGTAACGAGGTCGACAAAG
ATATCAAGAGCGTGGAGAAGATTTTAGTGCAGCTGAAACAAAATGGTGTG
TCGAGAAACGAACCTATCCTTATTGTTGGCGGGGGCGTTATCTCAGATAT
TGGTGGTTTTGCAACCGCCCTTTATCATCGAAATACGCCCTACGTCATGT
TGTGTACATCCATTGTATCTGGTATTGACGCCGGACCTTCACCCCGAACA
TGTTGTGATGGATTCGGGTTTAAGAATCTGTACGGTGCATATCACCCGCC
CATCTTGACGCTGACCGATCGTTCTTTCTTCAAAACACTTCATGAAGGCT
GGATTCGACATGGTGAGTCATTGAAATACTTTTCATTATTCCTTATAGTT
TTCTTCTATATGCCGCATCTGTATTCGATATATTAACGAACTTTCCTACT
TTCAGCTACATAAAAACAACGAAAAGAGCATGATTTATTTTGAAATTAAC
TTATTGTTTAAAACAGCATTGACAAATTTAATATGCACTCCCTAAAGACC
GTCATCAATCTTGAAAGTGCAGTCAGTCGTCACAAATAATGATTATTTCC
AATGACGTTGAAGTGTCTTGGCAAAAATAGGCTGCTACCCCTCTTTCGGT
CCCTCTTAGAGAATGAAGTCCTCTGAAAATTGGACCTGTAAGACTCTTTT
GTATTTTGAAATGAGCGTATTTTGAGAAAAAGTCAGAAAGGAGGAAAAAA
TCCCTAACTATTTTCCATTTTTTCAGGAATCGCTGAGATTATCAAGATGG
CTGTTGTAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCT
CGATTGATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATT
CGAAACGTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTC
GTTCGGAATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCT
TACGGCCATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCA
CGGACACGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGT
TGGAAAACTTCATCACGGCAGAGGAATGCAGCCGTATTTTACGTTTGATC
AGTACAATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTT
GGTTGCTGCCGCAAACACCAAGGTCATNTCATTATTCCTTATAGTTTTCT
TCTATATGCCGCATCTGTATTCGATATATTAACGAACTTTCCTACTTTCA
GCTACATAAAAACAATGAAAAGAGCATGATTTATTTTGAAATTAACTTAT
TGTTTAAAACAGCATTGACAAATTTAATATGCACTCCCTAAAGACCGTCA
TCAATCTTGAAAGTGCAGTCAGTCGTCACAAATAATGATTATTTCCAATG
ACGTTGAAGTGTCTTGGCAAAAATAGGCTGCTACCCCTCTTTCGGTCCCT
CTTAGAGAATGAAGTCCTCTGAAAATTGGACCTGTAAGACTCTTTTGTAT
TTTGAAATGAGCGTATTTTGAGAAAAAGTCAGAAAGGAGGAAAAAATCCC
TAACTATTTTCCATTTTTTCAGGAATCGCTGAGATTATCAAGATGGCTGT
TGTAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCGAT
TGATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCGAA
ACGTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGTTC
GGAATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTACG
GCCATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACGGA
CACGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTGGA
AAACTTCATCACGGCAGAAGAATGCAGCCGTATTTTACGTTTGATCAGTA
CAATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGGTT
GCTGCCGCAAACACCAAGGTCATCGAGAAAAGAGGTAGGCTTTATGTTAG
AAAGAAAGTGTATTGTGTCTTTAAACATGGTGTGCGAGCGTTGCACATTT
GCAAAACAGACTATAAAACCACAGATATCTAAGCCCGAAGGGCTAGATAG
GCAACTTTAAGCTTTCTCCAGCAAAAAAAAGTGAAGCAAAAATTTGACTT
TTTAAATTTCGTGCCGATGGATAGGATCTAGCATTTTAATTGTTTTCGGA
GCGCGAGATCAAAAACGTAGGCGAAAAACGCTATTTCACATCTCTCAAAC
CGGTGAAATTGCATATTTTAGTCACGTGACTCTGGTAGGAAATCCTTCCA
AAGATGAGCTTCACTTTTTGATAAAAGCCGCAAATCTAGCCCTTCGGGCT
TTACAGATATCTGTGTATAAAACAACATAAGGTTTCGATGGCCAACATAT
TTAGAACAAGTGAAGGACAATTTAAGCTTTAATGGACTCTAAAACACCCA
ATTTTTTAGAAAATCTAACAAAAATAATCACAAAATGGATGAAATTAAGA
ACAATTTTTGCCTTACAGCATAAAAGGCTAAGAACATCCAAAAACAAACA
CTCAGTTTAAGCCTGTGGTGGCTGTTTGCGACAGCTAAAGTGAGATTAAT
ATTGCAAACCACAATATAATGATAGTTATTTTGTTATCAAAGGTAATAAA
CAGAGAAACAAACGCTAAGAGGGATAAAATTTCGAGCAATTGTTGTTGCT
GAGAAAATTGATTATATATTTCGCTCGCTCGATTGTTTTTCTAGAGCTCA
AAACTAGAGTAACATTTTGATAGATTTTATTTATTTCGAAAGTTATGCAA
CTGTATTTTTTATCTCTCTCGTGGGTCTTGTCAATGCAATTATGTGATTA
CTTCAAAAAGCATTTTACTAAGGAATGAGCTTCGTGAAAATTCTGATCGA
GGTGAGAGAGAGAATGTAGCATGTTTGAGACAAGGCATTCGTTGAGAGAA
TATTTATCGAAATTTTTTTCTGTTTAATTCTAAAGATTCTTTTGCAACTT
TCTCCTGCTACAAAACAAATCTGGCTCTAAATATTTTCTGTTATACTGGT
GGCGAAGTCTAGATTACCATACATACCCCCTTCTCACAACGTTTTGAAGT
GACACAATCATAAACTGATTATCTAAAAAATTGTTTCATCTCTAAAACAT
TCTTTGAGAACGTTTATCCATCCTACGATACAGAAGTGGTTCGAAATTTA
TGACAATCGTCATCCTACTTTCCCAATTTCGAACAAAATATTTTTTTCAC
CACCCCTGTATCAATCACTTAAACTTGTTTTGGGTTACAAAGGTGTAACT
CGTTAATTTACAGTCAAAAATATTGAATCCTTCTAATGATATTGTATCTT
TCTCATCTCACAGGTGGCAATCTTTGTGCACCAGTACCCAAAGAACTTGG
TCAATGTGGTTACATCAACGAGTTGTCACGTGATACCATTAACCAGACAT
TGGATGATTACAAAATGCTGTGTCAGCAATTTCCACGATCAGGACGAGGA
GTTGATGTACACTGTCGCGATGTAGGGCTGGAAGATCCTTCTACTGTGGC
AGGTTATGGAGTAAATGATGTTTTGCAATCTAATGGTGCACCAAAGGTAT
GTTTCTTTCTTTGATTTCAATGCTTTTAGAAACTGAAAAACTTCCAATTA
AACGCAACACTAATTTAATTCAATCGGTTCTTCATGATCGCGATTCTTAA
GTTTTGTTTACTTCTCAGTTCTATTTTCTATTAAATCCATGGTCAAACAC
TAGTCTATGAACCACTGAAATTGTGTCAAGATCGGAATAAAAAAGTATAG
CAAAATATAGAAATTTGGGCTATTTTGCAGTCCTCCTTTGGTGTTTACTG
CTTCTTCCAAAGAATGATGATGATGGTCATTTTATGAAAAAATAGTTAAA
TTTTGTCGATTTAGCCTTTAAATATTCTGCATAAAAAGTATTTTTCTTGT
TCTTATAGCATCCAAACGGAAGTGCAGAATCCAACCCTCCGTCATCTTAC
TCCGAATGGATCAAAACGGTTCAAACAGAGCGGAACAGTGAATGGCAAAT
GAACGTCACTTTCCAAAAAGCCCTGGATACTGAATCCCCTCCTGATTTCA
ATCACTTCAAATTGTTTCATGATGGCGTCGAAACATACGCCATGGCTCAA
ACGACCATCCCTTCAAAAGGTGTCCAAAATATCGCCAATTTGACGCAAAA
CAACGAAATGTTTTCTCCCTGCATGGTTGGTTCGCTTGAGAGTCAATTCC
TAAAAATGCAATGCCAAATCAAAGGAGCTCGCAACGTGCTGGATGTCGGT
ACGTTTACTGGAATGTCTGCTTTGGCGATGGCTGAAGGAATCCCCGATGA
TGGTCAAGTTGTCACTTTAGAATGTGATGAAAAAATTGCTGACGTTGCAC
AACAAGCTTTTTCAGCGTCGAAAGTCGGTCACAAGATCCGTCTCGAGTTA
GGAAACGCCCTTCAAAGTATGAAGAAATTGGCAGCAAACGGCCAGAAATT
CGACGTCATTTTTCTTGACGCCGATAAAGAGAATTACATCCTTTACTACG
ATCTAGCCATGGATGAAGGAGTGTTAGCCGAAGGTGGAATTATCTTAGCT
GATAATGTGTTGTGTTCTCTTTTGTACGACAAGAAAGATTTTCGAAGTCA
GAAGCTTCACGAGTTCAACCAACATGTGAAGAATGACGATCGGGTGGAGC
AAGTTGTTTTGACCGTACGGGAAGGGATCTCTATCATCAGAAGGCGTTAA
ATAAACCGCTCATTCATACAGACACATTCAGAGAAGAAATTTTAGATTTC
AATTACATATTCCAAACAACATTATTATTTTCACGTTATTTTTTGTAAAT
AATTTTTTTTGAAGGTTTCACCAAATTCTTGCATCAGCATTTTTATGTCA
CTTCTTTTATCAAAGAACAGAAAAATTTTNTTCTTTTCTTGCATCAGCAT
TTTTATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTGAATTCTAAAT
TTTGTAAATGATTTTCCTTTATATCTGAAGTAATCATTGTCAAGCAGTTA
ATAGGTTGTATTCTGT Coding sequence (CDS) from alignment at scaffold_98:8005..18570- >TCONS_00073807 ID=TCONS_00073807|Name=TCONS_00073807|organism=Clytia hemisphaerica|type=CDS|length=2607bp|location=Sequence derived from alignment at scaffold_98:8005..18570- (Clytia hemisphaerica)
ATGGTCAAGAAGGAAGAAATCAATACCATCCAATACTACAGTTTGAAAGC
TGTCGATGGTGAAAAAGTGAAGAAATTACTTCGAAACACAATCAATGCTC
TTTCAGAGAAAGAATTTTCATCTGAAGATGGTTTGACCAGGTTTGTCACA
GACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATGTTTCACA
GCTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTACGATTTGG
ACATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCTCCCTCTG
AGTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACAAAGCCTT
CAATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGCTCCGATG
AAAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGCAACTAAA
ATGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCGAGACCAT
TGACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGCAATGGAT
TGACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGATGAGCACT
TCAATAACAACATCTATCAAAATCACTAATAAGGTGCTTCATCCTTCAAA
CAAGACATTGATCAACACTTACCTACACTTTGGGCGTTGCGTCGCCATCA
TTGACGATAAAGTCATCCTGCACTATGGTGAAGAATTGCAAAAATATTTC
GATCATTTCGGTGTTGAGTTGGTGAATTTGATCCATGGTGGTAACGAGGT
CGACAAAGATATCAAGAGCGTGGAGAAGATTTTAGTGCAGCTGAAACAAA
ATGGTGTGTCGAGAAACGAACCTATCCTTATTGTTGGCGGGGGCGTTATC
TCAGATATTGGTGGTTTTGCAACCGCCCTTTATCATCGAAATACGCCCTA
CGTCATGTTGTGTACATCCATTGTATCTGGTATTGACGCCGGACCTTCAC
CCCGAACATGTTGTGATGGATTCGGGTTTAAGAATCTGTACGGTGCATAT
CACCCGCCCATCTTGACGCTGACCGATCGTTCTTTCTTCAAAACACTTCA
TGAAGGCTGGATTCGACATGGAATCGCTGAGATTATCAAGATGGCTGTTG
TAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCGATTG
ATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCGAAAC
GTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGTTCGG
AATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTACGGC
CATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACGGACA
CGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTGGAAA
ACTTCATCACGGCAGAGGAATGCAGCCGTATTTTACGTTTGATCAGTACA
ATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGGTTGC
TGCCGCAAACACCAAGGTCATCGAGAAAAGAGGTGGCAATCTTTGTGCAC
CAGTACCCAAAGAACTTGGTCAATGTGGTTACATCAACGAGTTGTCACGT
GATACCATTAACCAGACATTGGATGATTACAAAATGCTGTGTCAGCAATT
TCCACGATCAGGACGAGGAGTTGATGTACACTGTCGCGATGTAGGGCTGG
AAGATCCTTCTACTGTGGCAGGTTATGGAGTAAATGATGTTTTGCAATCT
AATGGTGCACCAAAGCATCCAAACGGAAGTGCAGAATCCAACCCTCCGTC
ATCTTACTCCGAATGGATCAAAACGGTTCAAACAGAGCGGAACAGTGAAT
GGCAAATGAACGTCACTTTCCAAAAAGCCCTGGATACTGAATCCCCTCCT
GATTTCAATCACTTCAAATTGTTTCATGATGGCGTCGAAACATACGCCAT
GGCTCAAACGACCATCCCTTCAAAAGGTGTCCAAAATATCGCCAATTTGA
CGCAAAACAACGAAATGTTTTCTCCCTGCATGGTTGGTTCGCTTGAGAGT
CAATTCCTAAAAATGCAATGCCAAATCAAAGGAGCTCGCAACGTGCTGGA
TGTCGGTACGTTTACTGGAATGTCTGCTTTGGCGATGGCTGAAGGAATCC
CCGATGATGGTCAAGTTGTCACTTTAGAATGTGATGAAAAAATTGCTGAC
GTTGCACAACAAGCTTTTTCAGCGTCGAAAGTCGGTCACAAGATCCGTCT
CGAGTTAGGAAACGCCCTTCAAAGTATGAAGAAATTGGCAGCAAACGGCC
AGAAATTCGACGTCATTTTTCTTGACGCCGATAAAGAGAATTACATCCTT
TACTACGATCTAGCCATGGATGAAGGAGTGTTAGCCGAAGGTGGAATTAT
CTTAGCTGATAATGTGTTGTGTTCTCTTTTGTACGACAAGAAAGATTTTC
GAAGTCAGAAGCTTCACGAGTTCAACCAACATGTGAAGAATGACGATCGG
GTGGAGCAAGTTGTTTTGACCGTACGGGAAGGGATCTCTATCATCAGAAG
GCGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073807-exon-scaffold_98-1575043694:17741..18570 | TCONS_00073807-exon-scaffold_98-1575043694:17741..18570 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1575043694:16881..16902 | TCONS_00073807-exon-scaffold_98-1575043694:16881..16902 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1575043694:12809..13295 | TCONS_00073807-exon-scaffold_98-1575043694:12809..13295 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1575043694:11991..12394 | TCONS_00073807-exon-scaffold_98-1575043694:11991..12394 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1575043694:11087..11144 | TCONS_00073807-exon-scaffold_98-1575043694:11087..11144 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1575043694:9475..9707 | TCONS_00073807-exon-scaffold_98-1575043694:9475..9707 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1575043694:8005..9112 | TCONS_00073807-exon-scaffold_98-1575043694:8005..9112 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1510915933:17741..18570 | TCONS_00073807-exon-scaffold_98-1510915933:17741..18570 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1510915933:16881..16902 | TCONS_00073807-exon-scaffold_98-1510915933:16881..16902 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1510915933:12809..13295 | TCONS_00073807-exon-scaffold_98-1510915933:12809..13295 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1510915933:11991..12394 | TCONS_00073807-exon-scaffold_98-1510915933:11991..12394 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1510915933:11087..11144 | TCONS_00073807-exon-scaffold_98-1510915933:11087..11144 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1510915933:9475..9707 | TCONS_00073807-exon-scaffold_98-1510915933:9475..9707 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1510915933:8005..9112 | TCONS_00073807-exon-scaffold_98-1510915933:8005..9112 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1491911889:17741..18570 | TCONS_00073807-exon-scaffold_98-1491911889:17741..18570 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1491911889:16881..16902 | TCONS_00073807-exon-scaffold_98-1491911889:16881..16902 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1491911889:12809..13295 | TCONS_00073807-exon-scaffold_98-1491911889:12809..13295 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1491911889:11991..12394 | TCONS_00073807-exon-scaffold_98-1491911889:11991..12394 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1491911889:11087..11144 | TCONS_00073807-exon-scaffold_98-1491911889:11087..11144 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1491911889:9475..9707 | TCONS_00073807-exon-scaffold_98-1491911889:9475..9707 | Clytia hemisphaerica | exon |
| TCONS_00073807-exon-scaffold_98-1491911889:8005..9112 | TCONS_00073807-exon-scaffold_98-1491911889:8005..9112 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_98 | supercontig | scaffold_98:8005..18570 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008171 | O-methyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008171 |
O-methyltransferase activity |
Blast
BLAST of TCONS_00073807 vs. Swiss-Prot (Human)
Match: CMTD1 (Catechol O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 6.983e-18 Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = 1
Query: 2299 MVGSLESQFLKMQCQIKGARNVLDVGTFTGMSALAMAEGIPDDGQVVTLECDEKIADVAQQAFSASKVGHKIRLELGNALQSMKKLAANGQ--KFDVIFLDADKENYILYYDLAMDEGVLAEGGIILADNVLCS---LLYDKKDFRSQKLHEFNQHVKNDDRVEQVVLTVREG 2802
M+ ++Q L ++ A+ LD+GTFTG SALA+A +P DG+VVT E D + ++ + + ++ HKI L L AL+++ +L A G+ FDV +DADKEN YY+ + +L GGI+ VL L K D ++ + N+ ++ D RV +L + +G
Sbjct: 85 MMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQ--LLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDG 255
The following BLAST results are available for this feature:
|
