|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010418 ID=TCONS_00010418|Name=TCONS_00010418|organism=Clytia hemisphaerica|type=transcript|length=5375bp
TTTGTGGACGCTGAAGACGACCATCGCACCTTGAAGCTTCACATGGAATG
GTCGAACGGTCGCACCATAACGTATTCTGATTGGCTACAATATAATGGTG
TATTGCAACTGATGTATACATGGGCCACTTATGAGACTTTCATGAAACAA
CCGAAAGATGGGTACAGTTTCGTGGTCACTGCGATGGATTCGTGTGGAGC
GACTGGTTCCATCAACTACAAAGTCAAGATAAACAGCAATTTGCAACCAC
CTTGCTACGCGTTTGAGTTACTGGTGGAATCAAACTTGATTGCAGATACA
CCAAGAACACATTTATTGGGAGACATggttaacattttggccattcaATT
TAACGATGCAAAACTTTCCAAACATTTAGTTCAATCGTTGATACAGCACA
GCGCCATCAATTCAAGACTATTCTCCTTGCTTTTCAGCGATAGCACAATT
AGTTGCAATCCCTGTAATTTAAATAAGATTCGTCAGATCGAAACGACATC
GCAAAATAATCCAGCATTTCATTCAGCTTTTCCGCCgaatttcaaatatt
tgggATTCACGGTGAAATGGGATTCGTGTTCAGGCCACTCGCCACCGATT
ACGTTGAGGAGCCTACCACAACTCACCATCAACAACTACGGTTCATTGCA
GTATGAAATTCCTGCAGACACTTTTTACGACGCCGAGGAAGGGTTCACAA
ACAACCTCAAACTATCCATTGTTTCTAGTAAAAACATTATTGCTACCTTA
CAATACATGAAGTTGTCGGTTTATCAAATCGAAAACAATCCTATTTCCAC
GAAATCAACCTTCACCATAAAAGCTTCCGATANCAAAGCAATCCTAGTTC
CACGAAATCAACCTTCACCATAAAAGCTTCCGATAGTAAAAACCAGCAGA
CAGAGCTGCAAATTCACATCAATCTTAAAGGAGCGTTACCTCAGCCTCCT
GGTTACTTCAGTTTTCGTTTTACCGCCTATTACTCGTTTTCGAGCTCAGA
TGCAGAAATTCTTAACCTGGTCATGACAACGTTTTCAAAGTATTTGAATA
CTAACAGTATGAAGAATTTCAATGATTACGTCATTGTGGGATTCGCGCGA
ACAGGTTCTTTCCCACAATTCATCACTTTCTCATTCgctttcaaaacatt
ttatcATCACACACAAGGTTACAACCAATTCCTGATCGCACAAACCAAAC
TCTTCTCTCAAGGCTCAGTGTCCAATATGTTCATTGCAGACACCATACAA
TATATTCGAGATATCACTGGTCAAACACACGATAACTACAACGGTTATAT
TTTCGTAAAACCGACTATGGTGCAACCAACCATGATGCAAACTAAGATCA
ACCCTCATCCAAGTACGACTATAGACAACATCTCTCCTAGTACTGTTTCA
ACCCAACCATCAAGCAAATTACCTCATATCGAAGGCCCGATCGCTCTTTA
CCAGATAGGTCCGTTCAAAGTCACCTTCTGCGACTTCATGGTCTTCCCCA
TTCCCGATAACCTTTTCAAAGACGATGTTGACGGTTCAACGCGTCGACTG
AAACTATCTTTAACAGACGCTGGACATCAACCTGTCAGTACATCTTCCTG
GATTTTCGTTGACTCGGACATACAAGTCATCTACGGGTATTTAAAAGTTG
AAGATTATATTGAGTTACGAGGTGGAGGTGCAAACAAAGACACATTCTTC
CACCTGGTGGCCACAAACTCCAGAGGAGGATCCACGTCTTTACGATTTAG
TGTGGAACTACCAGAAAAGATCCCAGACATCTTATACACAGTCAGCATGA
AGGTGACGCCCTTCTATCAACCCTCCATCCCTGAGATCAATGAACAACTC
ATGCTACTGACCAAAATCTCTGCTTACTTTGGACTACCTTCTAAGTTCTC
TTGGATCAATATAATTTCCTTCAAACGTCAACCAAACGAGAACCAAATTA
CCATTGCGTGGACCAATTGTACCTTGACTGGCCAACAATGTCATAACAAA
GACGTCTCAACCATCGCGTCCAAAGTCGTTCTCGACAACGGTCAACCAAA
TTCTGTCTTCGCTCGCTTTTTATCTCCACAATACATCATTAACGAGATCC
GAGCGACGACTTCTTCACAATGCCAACACACGACGACGTCGACACTTCAA
CCGACGTCGTCAGTCATTGGATCATCATATCCAATCATTGTCAATAACAT
GCCGACGCTTGAAGTCACTACTCTCAATTATTTCACTTATAAGATCCCAT
TCAACACGTTTTACGACTCAACAGACGGGTATACACCCTACCTCACATTG
AGTATGTCGTCCAACGCTGGAAAACCCATCCCAAGATCCTCTTGGATACA
ATTCAATGCAGCTGCACAGGAAATCAATGCTTTCTTATACGTTGACATCT
TGAATGGTCGAGAAGTGGAGAATTTCCAATTTGTGTTAACAGCAACTAAC
TCTTTTGCAAGGTCTAAAAACATGGTGATTAACATTCAATGTCGTCGAAA
GGTGTTTCCAATGGGTGGTTTCTATGTGGAGTTTACTGGACGcgaatatt
tcaatcaaatcatGAATAATATACAAGTTCTTACTATTCTTCTTCAACGT
TACTTCCAGTACACTGGCAATCGATACAACACAGAGATCGTCTCTTTCCA
AAGGAACACTGGACTGAATTTTCGAATGAGGTTCATGTACCACCGCGTCA
TCGATTCCTCCAACGATTGTAATGTCACCGAACTGTACAACTTGCAAAAG
ATATTGCTCACGAGCCAAGGGCAAATCAATTCTGACTTTATGTTCGCATT
TTTACCAGAAGCGGTGGCAAGTCATGTCACCATCACTACCTTCGGCTCAT
GCTTGAACCTGCCTACCACCACACCGTCCACCCCTCAACCTGTCATATTG
AACCAGATTCAACCTTTAGTCATCAGCAATGCTGGCTTCTTCCAATACTC
CATTCCCGAAAAGACTTTCTATGACGCAAAAGATGGCTTTACACCAATGA
TGCAACTCAAACTTTTGGACCAATACAAAACGGAGGTTCGTAAGGACTCT
TGGATCACTTTATCCAACAACCAAGTGATATTAGCTTCACCCTCTAGCAT
GCAATTTCCAAACACCAGGACAAACCAGTTCTATCTGCGAGTGATCAACA
GTCAATTGAAGTTCACAGATTTGGCTTTAGAAGTGACAGTCATTAACCAA
TCACCTGTCGACGCTTTACGAATCACTCTAACAGGCGTGCACAAGTTCCA
ATCCATTTCAAGTACAGTAGACATAATCATTTACATCATGGAAAAACTCA
ACTCTTATTTGTACGACCAAACGAACCGTAAAGAGACAGTGTTGATCAGT
TTTTATCACAGCTCTTCCACCTTCACAATGCACCTGGATGACGCTTCACT
GATTGGCGACATCTGCTCATCCAACGCATTTCGAACCTTAGAAAAGAAGA
TTTACATCACACCTGGTAACATCCATCCACAGATGGTGATGGAGTTGTTC
CCTCAAGTCTCCTTGACAGAAGTTCAATTTTCTAAGCAATGTAACAGACC
GATCACAACCTCTAAACCAACCACAACAGAAAAACAGAATACCCCACCAT
ACGTCAACCAACCTATACAACCAATACATATCTCCTTTGGTCGGTTGTTG
TTCAAATACATCAGTCCTCAAACATTCCTAGATAGGGAGGACGGTGATGC
CAGACACTTACAATTAACACTCCTCCACAACAATGGTGGAACAGTCCAAC
CCGATAACTGGGTTCAAATGAACCAGAACACTCTGCTCATTTACGGTTCG
TACACTTTACAAGATTACAACATGTTACCGTTTGACAAATACCGTTACAT
GCTACGAGCAACTGACTCCAaaggctctttcacagcaactCCAATCATCT
TCGAGCGTCCAAGCACATCACTAGAGTACAGTTTCAAGATTCGTACCACA
ATTACCATGTTTTATGACTCCACCACCAGCTTGGTGAACGAGCAAATACT
TTTCATCACCAAGATCAATAGCTACATCACAACCTACCTTAGATATGGTA
TTCAAATCATCACTTTCACCAGAAGCATCTTGATCAAGCAACTCATTATT
GAATGGGCATTGGACAATCTCAGCGATGACATCTGTCCTTGGCAGACATT
ACAATTAATCACCGACAAATTCGTCTCCAACAGCCAACCATCAAGTGGAT
ATCGATCAATCATGAGGCCAGAATACTCAGTCAGTTCAGTAGAAATCCAA
CGAATGCCTTCATGTCAACAAATCACCATTTCACCATCCCCATCATCCAC
CACCACACATCTCCAAACCTCCACATCCATTCCTACAACTCCAATACCCG
AACCTCCGACCATTAACACAAACATCTTTCCAATAAGATTATCAACCAAG
CAAAGTGCCATCTTCATCNAAACCTCCGACCATTAAcacaaatatctttc
caataagATTATCAACCAAGCAAAGTGCCATCTTCATCTACTACATACCG
AGCAATGCATTTAACAACCCAATGAATTCACCCTTAAAGTTAGACCTCTT
AACAGAAGAGGGTAGACAACTGGAAAATAGATCTTGGGTTTCATTCAACA
AGCAGCATAATTACATTTATGGAATGTTGATTGAGGATATGATTACCAGT
GGTTCTTCTGATGTGTACCGTCTACAAGCAACTAATGGTGGAGGATCGGT
CTATTCTCAAGTCACTATCACAATACCGGTCTTAGAGAAGAAATTCCATT
CGATCACTATTCTGTTTCGTACAAGAGACACCTTCTTTAAATACGCAGAC
CTTACTGCACTCGTCATTGGCCAATTGAGTCTATACCTCAGACAAAGTGG
TGTCATTAATCTCTTATCAATCATCAAAATGCAAGGGAATTTCTGGTCCG
TACAATTCGCAGCATCCACTCAAATCGTCGACTATTGTAACATGCAACAA
TACTTTACGTTTCGACGGAAGTTTGTAGTAGACACACTAGTTAGTACTTT
GTTCAAGAACTTTGTTTATCCAGAGATGGAAGTACTACAAGCGTACGCTA
GCAATGAACAATGTCAAAACGTAACCACAACAACCACTACCACACCCACA
CCAAACGTAAACCTCCCTCCCACCGTCTTCAAATTGTTTGCGAAAGTTAC
GGCAACGACATGTGAGGTGTTCGAGTTTCAGATTCCTAACAACTCGTTCT
TCGACGTGGAAGACGGGTTAACATCGAACCTGGCGATCACCATACAAGAA
CCGGATGGAGCAGAATTACCAAAAGATGTTTGGCtggttttcaatgaaac
gacGCGCACGTTGAGAGGATTGTTGACGCTGACCGAAGCAGTGAATAGCA
ACCAGTTTGTTTATCGAGTGGTGGC Run BLAST on NCBI protein sequence of TCONS_00010418-protein >TCONS_00010418-protein ID=TCONS_00010418-protein|Name=TCONS_00010418-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1137bp
MTTFSKYLNTNSMKNFNDYVIVGFARTGSFPQFITFSFAFKTFYHHTQGY
NQFLIAQTKLFSQGSVSNMFIADTIQYIRDITGQTHDNYNGYIFVKPTMV
QPTMMQTKINPHPSTTIDNISPSTVSTQPSSKLPHIEGPIALYQIGPFKV
TFCDFMVFPIPDNLFKDDVDGSTRRLKLSLTDAGHQPVSTSSWIFVDSDI
QVIYGYLKVEDYIELRGGGANKDTFFHLVATNSRGGSTSLRFSVELPEKI
PDILYTVSMKVTPFYQPSIPEINEQLMLLTKISAYFGLPSKFSWINIISF
KRQPNENQITIAWTNCTLTGQQCHNKDVSTIASKVVLDNGQPNSVFARFL
SPQYIINEIRATTSSQCQHTTTSTLQPTSSVIGSSYPIIVNNMPTLEVTT
LNYFTYKIPFNTFYDSTDGYTPYLTLSMSSNAGKPIPRSSWIQFNAAAQE
INAFLYVDILNGREVENFQFVLTATNSFARSKNMVINIQCRRKVFPMGGF
YVEFTGREYFNQIMNNIQVLTILLQRYFQYTGNRYNTEIVSFQRNTGLNF
RMRFMYHRVIDSSNDCNVTELYNLQKILLTSQGQINSDFMFAFLPEAVAS
HVTITTFGSCLNLPTTTPSTPQPVILNQIQPLVISNAGFFQYSIPEKTFY
DAKDGFTPMMQLKLLDQYKTEVRKDSWITLSNNQVILASPSSMQFPNTRT
NQFYLRVINSQLKFTDLALEVTVINQSPVDALRITLTGVHKFQSISSTVD
IIIYIMEKLNSYLYDQTNRKETVLISFYHSSSTFTMHLDDASLIGDICSS
NAFRTLEKKIYITPGNIHPQMVMELFPQVSLTEVQFSKQCNRPITTSKPT
TTEKQNTPPYVNQPIQPIHISFGRLLFKYISPQTFLDREDGDARHLQLTL
LHNNGGTVQPDNWVQMNQNTLLIYGSYTLQDYNMLPFDKYRYMLRATDSK
GSFTATPIIFERPSTSLEYSFKIRTTITMFYDSTTSLVNEQILFITKINS
YITTYLRYGIQIITFTRSILIKQLIIEWALDNLSDDICPWQTLQLITDKF
VSNSQPSSGYRSIMRPEYSVSSVEIQRMPSCQQITISPSPSSTTTHLQTS
TSIPTTPIPEPPTINTNIFPIRLSTKQSAIFIXTSDH Run BLAST on NCBI transcript from alignment at sc0000106:556488..562046+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010418 ID=TCONS_00010418|Name=TCONS_00010418|organism=Clytia hemisphaerica|type=transcript|length=5559bp|location=Sequence derived from alignment at sc0000106:556488..562046+ (Clytia hemisphaerica)
TTTGTGGACGCTGAAGACGACCATCGCACCTTGAAGCTTCACATGGAATG
GTCGAACGGTCGCACCATAACGTATTCTGATTGGCTACAATATAATGGTG
TATTGCAACTGATGTATACATGGGCCACTTATGAGACTTTCATGAAACAA
CCGAAAGATGGGTACAGTTTCGTGGTCACTGCGATGGATTCGTGTGGAGC
GACTGGTTCCATCAACTACAAAGTCAAGATAAACAGCAATTTGCAACCAC
CTTGCTACGCGTTTGAGTTACTGGTGGAATCAAACTTGATTGCAGATACA
CCAAGAACACATTTATTGGGAGACATggttaacattttggccattcaATT
TAACGATGCAAAACTTTCCAAACATTTAGTTCAATCGTTGATACAGCACA
GCGCCATCAATTCAAGACTATTCTCCTTGCTTTTCAGCGATAGCACAATT
AGTTGCAATCCCTGTAATTTAAATAAGATTCGTCAGATCGAAACGACATC
GCAAAATAATCCAGCATTTCATTCAGCTTTTCCGCCgaatttcaaatatt
tgggATTCACGGTGAAATGGGATTCGTGTTCAGGCCACTCGCCACCGATT
ACGTTGAGGAGCCTACCACAACTCACCATCAACAACTACGGTTCATTGCA
GTATGAAATTCCTGCAGACACTTTTTACGACGCCGAGGAAGGGTTCACAA
ACAACCTCAAACTATCCATTGTTTCTAGTAAAAACATTATTGCTACCTTA
CAATACATGAAGTTGTCGGTTTATCAAATCGAAAACAATCCTATTTCCAC
GAAATCAACCTTCACCATAAAAGCTTCCGATANCAAAGCAATCCTAGTTC
CACGAAATCAACCTTCACCATAAAAGCTTCCGATAGTAAAAACCAGCAGA
CAGAGCTGCAAATTCACATCAATCTTAAAGGAGCGTTACCTCAGCCTCCT
GGTTACTTCAGTTTTCGTTTTACCGCCTATTACTCGTTTTCGAGCTCAGA
TGCAGAAATTCTTAACCTGGTCATGACAACGTTTTCAAAGTATTTGAATA
CTAACAGTATGAAGAATTTCAATGATTACGTCATTGTGGGATTCGCGCGA
ACAGGTTCTTTCCCACAATTCATCACTTTCTCATTCgctttcaaaacatt
ttatcATCACACACAAGGTTACAACCAATTCCTGATCGCACAAACCAAAC
TCTTCTCTCAAGGCTCAGTGTCCAATATGTTCATTGCAGACACCATACAA
TATATTCGAGATATCACTGGTCAAACACACGATAACTACAACGGTTATAT
TTTCGTAAAACCGACTATGGTGCAACCAACCATGATGCAAACTAAGATCA
ACCCTCATCCAAGTACGACTATAGACAACATCTCTCCTAGTACTGTTTCA
ACCCAACCATCAAGCAAATTACCTCATATCGAAGGCCCGATCGCTCTTTA
CCAGATAGGTCCGTTCAAAGTCACCTTCTGCGACTTCATGGTCTTCCCCA
TTCCCGATAACCTTTTCAAAGACGATGTTGACGGTTCAACGCGTCGACTG
AAACTATCTTTAACAGACGCTGGACATCAACCTGTCAGTACATCTTCCTG
GATTTTCGTTGACTCGGACATACAAGTCATCTACGGGTATTTAAAAGTTG
AAGATTATATTGAGTTACGAGGTGGAGGTGCAAACAAAGACACATTCTTC
CACCTGGTGGCCACAAACTCCAGAGGAGGATCCACGTCTTTACGATTTAG
TGTGGAACTACCAGAAAAGATCCCAGACATCTTATACACAGTCAGCATGA
AGGTGACGCCCTTCTATCAACCCTCCATCCCTGAGATCAATGAACAACTC
ATGCTACTGACCAAAATCTCTGCTTACTTTGGACTACCTTCTAAGTTCTC
TTGGATCAATATAATTTCCTTCAAACGTCAACCAAACGAGAACCAAATTA
CCATTGCGTGGACCAATTGTACCTTGACTGGCCAACAATGTCATAACAAA
GACGTCTCAACCATCGCGTCCAAAGTCGTTCTCGACAACGGTCAACCAAA
TTCTGTCTTCGCTCGCTTTTTATCTCCACAATACATCATTAACGAGATCC
GAGCGACGACTTCTTCACAATGCCAACACACGACGACGTCGACACTTCAA
CCGACGTCGTCAGTCATTGGATCATCATATCCAATCATTGTCAATAACAT
GCCGACGCTTGAAGTCACTACTCTCAATTATTTCACTTATAAGGTAGGTC
CATCTTTATGCCAACAAGGGGAACCATATCATCACCatcatcaaaatttg
ttttgtttctatttAGCCCTTTTTGCTAAAAATCATAACTTGGAGGTCTC
AAGAAACATTTTCTGGTTTAAAAAACCTCATTTTAACTAACAGTTATAGC
TGAAACTTATCTCCCACTTTTTTATAGATCCCATTCAACACGTTTTACGA
CTCAACAGACGGGTATACACCCTACCTCACATTGAGTATGTCGTCCAACG
CTGGAAAACCCATCCCAAGATCCTCTTGGATACAATTCAATGCAGCTGCA
CAGGAAATCAATGCTTTCTTATACGTTGACATCTTGAATGGTCGAGAAGT
GGAGAATTTCCAATTTGTGTTAACAGCAACTAACTCTTTTGCAAGGTCTA
AAAACATGGTGATTAACATTCAATGTCGTCGAAAGGTGTTTCCAATGGGT
GGTTTCTATGTGGAGTTTACTGGACGcgaatatttcaatcaaatcatGAA
TAATATACAAGTTCTTACTATTCTTCTTCAACGTTACTTCCAGTACACTG
GCAATCGATACAACACAGAGATCGTCTCTTTCCAAAGGAACACTGGACTG
AATTTTCGAATGAGGTTCATGTACCACCGCGTCATCGATTCCTCCAACGA
TTGTAATGTCACCGAACTGTACAACTTGCAAAAGATATTGCTCACGAGCC
AAGGGCAAATCAATTCTGACTTTATGTTCGCATTTTTACCAGAAGCGGTG
GCAAGTCATGTCACCATCACTACCTTCGGCTCATGCTTGAACCTGCCTAC
CACCACACCGTCCACCCCTCAACCTGTCATATTGAACCAGATTCAACCTT
TAGTCATCAGCAATGCTGGCTTCTTCCAATACTCCATTCCCGAAAAGACT
TTCTATGACGCAAAAGATGGCTTTACACCAATGATGCAACTCAAACTTTT
GGACCAATACAAAACGGAGGTTCGTAAGGACTCTTGGATCACTTTATCCA
ACAACCAAGTGATATTAGCTTCACCCTCTAGCATGCAATTTCCAAACACC
AGGACAAACCAGTTCTATCTGCGAGTGATCAACAGTCAATTGAAGTTCAC
AGATTTGGCTTTAGAAGTGACAGTCATTAACCAATCACCTGTCGACGCTT
TACGAATCACTCTAACAGGCGTGCACAAGTTCCAATCCATTTCAAGTACA
GTAGACATAATCATTTACATCATGGAAAAACTCAACTCTTATTTGTACGA
CCAAACGAACCGTAAAGAGACAGTGTTGATCAGTTTTTATCACAGCTCTT
CCACCTTCACAATGCACCTGGATGACGCTTCACTGATTGGCGACATCTGC
TCATCCAACGCATTTCGAACCTTAGAAAAGAAGATTTACATCACACCTGG
TAACATCCATCCACAGATGGTGATGGAGTTGTTCCCTCAAGTCTCCTTGA
CAGAAGTTCAATTTTCTAAGCAATGTAACAGACCGATCACAACCTCTAAA
CCAACCACAACAGAAAAACAGAATACCCCACCATACGTCAACCAACCTAT
ACAACCAATACATATCTCCTTTGGTCGGTTGTTGTTCAAATACATCAGTC
CTCAAACATTCCTAGATAGGGAGGACGGTGATGCCAGACACTTACAATTA
ACACTCCTCCACAACAATGGTGGAACAGTCCAACCCGATAACTGGGTTCA
AATGAACCAGAACACTCTGCTCATTTACGGTTCGTACACTTTACAAGATT
ACAACATGTTACCGTTTGACAAATACCGTTACATGCTACGAGCAACTGAC
TCCAaaggctctttcacagcaactCCAATCATCTTCGAGCGTCCAAGCAC
ATCACTAGAGTACAGTTTCAAGATTCGTACCACAATTACCATGTTTTATG
ACTCCACCACCAGCTTGGTGAACGAGCAAATACTTTTCATCACCAAGATC
AATAGCTACATCACAACCTACCTTAGATATGGTATTCAAATCATCACTTT
CACCAGAAGCATCTTGATCAAGCAACTCATTATTGAATGGGCATTGGACA
ATCTCAGCGATGACATCTGTCCTTGGCAGACATTACAATTAATCACCGAC
AAATTCGTCTCCAACAGCCAACCATCAAGTGGATATCGATCAATCATGAG
GCCAGAATACTCAGTCAGTTCAGTAGAAATCCAACGAATGCCTTCATGTC
AACAAATCACCATTTCACCATCCCCATCATCCACCACCACACATCTCCAA
ACCTCCACATCCATTCCTACAACTCCAATACCCGAACCTCCGACCATTAA
CACAAACATCTTTCCAATAAGATTATCAACCAAGCAAAGTGCCATCTTCA
TCNAAACCTCCGACCATTAAcacaaatatctttccaataagATTATCAAC
CAAGCAAAGTGCCATCTTCATCTACTACATACCGAGCAATGCATTTAACA
ACCCAATGAATTCACCCTTAAAGTTAGACCTCTTAACAGAAGAGGGTAGA
CAACTGGAAAATAGATCTTGGGTTTCATTCAACAAGCAGCATAATTACAT
TTATGGAATGTTGATTGAGGATATGATTACCAGTGGTTCTTCTGATGTGT
ACCGTCTACAAGCAACTAATGGTGGAGGATCGGTCTATTCTCAAGTCACT
ATCACAATACCGGTCTTAGAGAAGAAATTCCATTCGATCACTATTCTGTT
TCGTACAAGAGACACCTTCTTTAAATACGCAGACCTTACTGCACTCGTCA
TTGGCCAATTGAGTCTATACCTCAGACAAAGTGGTGTCATTAATCTCTTA
TCAATCATCAAAATGCAAGGGAATTTCTGGTCCGTACAATTCGCAGCATC
CACTCAAATCGTCGACTATTGTAACATGCAACAATACTTTACGTTTCGAC
GGAAGTTTGTAGTAGACACACTAGTTAGTACTTTGTTCAAGAACTTTGTT
TATCCAGAGATGGAAGTACTACAAGCGTACGCTAGCAATGAACAATGTCA
AAACGTAACCACAACAACCACTACCACACCCACACCAAACGTAAACCTCC
CTCCCACCGTCTTCAAATTGTTTGCGAAAGTTACGGCAACGACATGTGAG
GTGTTCGAGTTTCAGATTCCTAACAACTCGTTCTTCGACGTGGAAGACGG
GTTAACATCGAACCTGGCGATCACCATACAAGAACCGGATGGAGCAGAAT
TACCAAAAGATGTTTGGCtggttttcaatgaaacgacGCGCACGTTGAGA
GGATTGTTGACGCTGACCGAAGCAGTGAATAGCAACCAGTTTGTTTATCG
AGTGGTGGC Coding sequence (CDS) from alignment at sc0000106:556488..562046+ >TCONS_00010418 ID=TCONS_00010418|Name=TCONS_00010418|organism=Clytia hemisphaerica|type=CDS|length=3414bp|location=Sequence derived from alignment at sc0000106:556488..562046+ (Clytia hemisphaerica)
ATGACAACGTTTTCAAAGTATTTGAATACTAACAGTATGAAGAATTTCAA
TGATTACGTCATTGTGGGATTCGCGCGAACAGGTTCTTTCCCACAATTCA
TCACTTTCTCATTCgctttcaaaacattttatcATCACACACAAGGTTAC
AACCAATTCCTGATCGCACAAACCAAACTCTTCTCTCAAGGCTCAGTGTC
CAATATGTTCATTGCAGACACCATACAATATATTCGAGATATCACTGGTC
AAACACACGATAACTACAACGGTTATATTTTCGTAAAACCGACTATGGTG
CAACCAACCATGATGCAAACTAAGATCAACCCTCATCCAAGTACGACTAT
AGACAACATCTCTCCTAGTACTGTTTCAACCCAACCATCAAGCAAATTAC
CTCATATCGAAGGCCCGATCGCTCTTTACCAGATAGGTCCGTTCAAAGTC
ACCTTCTGCGACTTCATGGTCTTCCCCATTCCCGATAACCTTTTCAAAGA
CGATGTTGACGGTTCAACGCGTCGACTGAAACTATCTTTAACAGACGCTG
GACATCAACCTGTCAGTACATCTTCCTGGATTTTCGTTGACTCGGACATA
CAAGTCATCTACGGGTATTTAAAAGTTGAAGATTATATTGAGTTACGAGG
TGGAGGTGCAAACAAAGACACATTCTTCCACCTGGTGGCCACAAACTCCA
GAGGAGGATCCACGTCTTTACGATTTAGTGTGGAACTACCAGAAAAGATC
CCAGACATCTTATACACAGTCAGCATGAAGGTGACGCCCTTCTATCAACC
CTCCATCCCTGAGATCAATGAACAACTCATGCTACTGACCAAAATCTCTG
CTTACTTTGGACTACCTTCTAAGTTCTCTTGGATCAATATAATTTCCTTC
AAACGTCAACCAAACGAGAACCAAATTACCATTGCGTGGACCAATTGTAC
CTTGACTGGCCAACAATGTCATAACAAAGACGTCTCAACCATCGCGTCCA
AAGTCGTTCTCGACAACGGTCAACCAAATTCTGTCTTCGCTCGCTTTTTA
TCTCCACAATACATCATTAACGAGATCCGAGCGACGACTTCTTCACAATG
CCAACACACGACGACGTCGACACTTCAACCGACGTCGTCAGTCATTGGAT
CATCATATCCAATCATTGTCAATAACATGCCGACGCTTGAAGTCACTACT
CTCAATTATTTCACTTATAAGATCCCATTCAACACGTTTTACGACTCAAC
AGACGGGTATACACCCTACCTCACATTGAGTATGTCGTCCAACGCTGGAA
AACCCATCCCAAGATCCTCTTGGATACAATTCAATGCAGCTGCACAGGAA
ATCAATGCTTTCTTATACGTTGACATCTTGAATGGTCGAGAAGTGGAGAA
TTTCCAATTTGTGTTAACAGCAACTAACTCTTTTGCAAGGTCTAAAAACA
TGGTGATTAACATTCAATGTCGTCGAAAGGTGTTTCCAATGGGTGGTTTC
TATGTGGAGTTTACTGGACGcgaatatttcaatcaaatcatGAATAATAT
ACAAGTTCTTACTATTCTTCTTCAACGTTACTTCCAGTACACTGGCAATC
GATACAACACAGAGATCGTCTCTTTCCAAAGGAACACTGGACTGAATTTT
CGAATGAGGTTCATGTACCACCGCGTCATCGATTCCTCCAACGATTGTAA
TGTCACCGAACTGTACAACTTGCAAAAGATATTGCTCACGAGCCAAGGGC
AAATCAATTCTGACTTTATGTTCGCATTTTTACCAGAAGCGGTGGCAAGT
CATGTCACCATCACTACCTTCGGCTCATGCTTGAACCTGCCTACCACCAC
ACCGTCCACCCCTCAACCTGTCATATTGAACCAGATTCAACCTTTAGTCA
TCAGCAATGCTGGCTTCTTCCAATACTCCATTCCCGAAAAGACTTTCTAT
GACGCAAAAGATGGCTTTACACCAATGATGCAACTCAAACTTTTGGACCA
ATACAAAACGGAGGTTCGTAAGGACTCTTGGATCACTTTATCCAACAACC
AAGTGATATTAGCTTCACCCTCTAGCATGCAATTTCCAAACACCAGGACA
AACCAGTTCTATCTGCGAGTGATCAACAGTCAATTGAAGTTCACAGATTT
GGCTTTAGAAGTGACAGTCATTAACCAATCACCTGTCGACGCTTTACGAA
TCACTCTAACAGGCGTGCACAAGTTCCAATCCATTTCAAGTACAGTAGAC
ATAATCATTTACATCATGGAAAAACTCAACTCTTATTTGTACGACCAAAC
GAACCGTAAAGAGACAGTGTTGATCAGTTTTTATCACAGCTCTTCCACCT
TCACAATGCACCTGGATGACGCTTCACTGATTGGCGACATCTGCTCATCC
AACGCATTTCGAACCTTAGAAAAGAAGATTTACATCACACCTGGTAACAT
CCATCCACAGATGGTGATGGAGTTGTTCCCTCAAGTCTCCTTGACAGAAG
TTCAATTTTCTAAGCAATGTAACAGACCGATCACAACCTCTAAACCAACC
ACAACAGAAAAACAGAATACCCCACCATACGTCAACCAACCTATACAACC
AATACATATCTCCTTTGGTCGGTTGTTGTTCAAATACATCAGTCCTCAAA
CATTCCTAGATAGGGAGGACGGTGATGCCAGACACTTACAATTAACACTC
CTCCACAACAATGGTGGAACAGTCCAACCCGATAACTGGGTTCAAATGAA
CCAGAACACTCTGCTCATTTACGGTTCGTACACTTTACAAGATTACAACA
TGTTACCGTTTGACAAATACCGTTACATGCTACGAGCAACTGACTCCAaa
ggctctttcacagcaactCCAATCATCTTCGAGCGTCCAAGCACATCACT
AGAGTACAGTTTCAAGATTCGTACCACAATTACCATGTTTTATGACTCCA
CCACCAGCTTGGTGAACGAGCAAATACTTTTCATCACCAAGATCAATAGC
TACATCACAACCTACCTTAGATATGGTATTCAAATCATCACTTTCACCAG
AAGCATCTTGATCAAGCAACTCATTATTGAATGGGCATTGGACAATCTCA
GCGATGACATCTGTCCTTGGCAGACATTACAATTAATCACCGACAAATTC
GTCTCCAACAGCCAACCATCAAGTGGATATCGATCAATCATGAGGCCAGA
ATACTCAGTCAGTTCAGTAGAAATCCAACGAATGCCTTCATGTCAACAAA
TCACCATTTCACCATCCCCATCATCCACCACCACACATCTCCAAACCTCC
ACATCCATTCCTACAACTCCAATACCCGAACCTCCGACCATTAACACAAA
CATCTTTCCAATAAGATTATCAACCAAGCAAAGTGCCATCTTCATCNAAA
CCTCCGACCATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010418-exon-sc0000106-1491911889:556488..558730 | TCONS_00010418-exon-sc0000106-1491911889:556488..558730 | Clytia hemisphaerica | exon |
| TCONS_00010418-exon-sc0000106-1510915933:556488..558730 | TCONS_00010418-exon-sc0000106-1510915933:556488..558730 | Clytia hemisphaerica | exon |
| TCONS_00010418-exon-sc0000106-1575043694:556488..558730 | TCONS_00010418-exon-sc0000106-1575043694:556488..558730 | Clytia hemisphaerica | exon |
| TCONS_00010418-exon-sc0000106-1491911889:558915..562046 | TCONS_00010418-exon-sc0000106-1491911889:558915..562046 | Clytia hemisphaerica | exon |
| TCONS_00010418-exon-sc0000106-1510915933:558915..562046 | TCONS_00010418-exon-sc0000106-1510915933:558915..562046 | Clytia hemisphaerica | exon |
| TCONS_00010418-exon-sc0000106-1575043694:558915..562046 | TCONS_00010418-exon-sc0000106-1575043694:558915..562046 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106 | supercontig | sc0000106:556488..562046 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016010 | dystrophin-associated glycoprotein complex |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007016 | cytoskeletal anchoring at plasma membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005509 | calcium ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007016 |
cytoskeletal anchoring at plasma membrane |
| cellular_component |
GO:0016010 |
dystrophin-associated glycoprotein complex |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0005509 |
calcium ion binding |
Blast
The following BLAST results are available for this feature:
|
