XLOC_006658 (gene) - C. hemisphaerica

Overview
NameXLOC_006658
Unique NameXLOC_006658
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000133:126735..135009-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006658 ID=XLOC_006658|Name=XLOC_006658|organism=Clytia hemisphaerica|type=gene|length=8275bp|location=Sequence derived from alignment at sc0000133:126735..135009- (Clytia hemisphaerica)
CTGAATGAAAGCATAAAATTTTAATATTCAGAATTATTAAGAAAGAAGAT CTTAAGACGGAAAAAGTCTTTGTTATTATAGTTGATATTTTGGATTTACT CAATTTGTTTTCCTGGTGGACAATATAATTAATTGTTGATGGAAGAACGT GAAAATGATGAATTTGCAGATGTTTCAACTACTATTAATGAAATCAACTC GACCTTAAATGAACACTTATTTCTTGACAATTCTCTGCAAGAAAATAAAG GTACATACTAACTCTTAAATTGACCCCCATTCACGAATTCACGCAAACCG CTGGGATGCCCTATATCAATAGTTTTACACTGTATTGTTTATTCTGTTCC CAGTTTATTTTCCTCTGATTGGGCTCTAGGCCCCCTCTAGGGGGTGGATA ATTTCGGGGGTAGTGAAAAATCTACAAAATTTGCCTTGCTGAGGGGAGGG GGGTAAACTTGATCTGCTTAGGGGTAATTTTGCTCTGTTTGAAGGTAATT TTGATTGTCCATGGGGTCAACTATTGCTTGTCCAGGGGTAAATTTCCAAA AAATGTTATCCTCCCAGATCCTCCAACCCCCGTATTCAAATTTTTTATGG AAAAGCCCATTAGGGATCATTATCAAAATTGAAAATAATACTTTTTTACT TTTCAGGTTCAGTATCCACATTTTTGAAGGACTTGTTATCAAAGCAAGCA GAATCACATAGGAAAATTCAAGTTTGTTCCTTACTATCTCAGTTAACAAA ATTATCCATTTCTTGTAAAATTTATCCTGATTTATTCATTGCATTGCTGC CCTCGTCACCATGGTTTCTGCCTACTTTTCAGTCCCGCCTTAAAATGAAT TTTGCCCTTAAAGAAAACTCCCTCTTTAAATCGAACAAAAATTATCAGTA CCCCTTATTAGCAGTTACATCAAAATGCAAAAAAAAATTTTGTTCAACCA CCTTCACTTCAAGATAGGCCACCATAGAATGAACTTCCTTTTATAGGATG AGGAGTGCAAAGCTGAAAGCCACATGAATATGCTTCATCTTATAAAAGGA AGTTCATTCTATGGTGGCCTATCTTGAAGTGAAGGTGGTTGACATGGGCC CCGTCAGCGGGGGGGGGGGGGGGGATCCCCCCCCCCCCCCCCGCTGACGG GGCCCATGTCAACCACCTTCACTTCAAGATAGGCCACCATAGAATGAACT TCCTTTTATAGGATGAGGAGTGCAAAGCTGAAAGCCGCATGAATATGCTT CATCTTATAAAAGGAAGTTCATTCTATGGGGGCCTATCTTGAAGTGAAGG TGGTTGACATGGGCCCCGTCAAGGGGGGGGGGGGGTCCATGCCCCCCCCC ACTTTTTGGTAGACCATGTCATACGTTTTTAAGAGCTACTATTTTAAGCT GATTTGAGATCAAATCAAACTACAAAAACTATTATTTTCCCCAATTAGAT ATCGTTTTAAGGTGTTTTGAGGGTGTAAAATGTGAAAAATTTTCTTTGTC GCCCAACCATGGTGGTTTCCAAAATGTTGGCCCCCTCACTCAAAATGGCT CGCCGGGGCCCATGTTGAACAAAATGTTTTTGGCATATTGATGTAACTGA TTAGAATGCCCCCCCCTTAAAATAAAATAAGCAGTCCCCCTTAGATTTTT TAATCCCCTTCAGCAAGCAATTTTTACAATTTTTAGAGAGAGTGGGAAGA GAGGATGCAGATTGTGAGCATGAAAACGGGAAAGAAAATATTGGATAAAG AAAATTATTATCGATAAACCAGATAGTAGGGGGCCAAGCCTGGGTGGGGT CCCGTGGCATCTTTTTTACGACCTGGCAATTTTTAGTCTATTCCAAAGAA CAGTATTACATAATACTTTTGAGAGGGAGGACGCAGATTAGGCCTGGGAA AACTTAAAGTTAAAATAAACGAATATGATTGATACCATCTGATAGATCAT GAAATTCTGAGTAAAAAAATGTTTTACAACAACTCTCTGACTAAAACACA CAAAGAAATACAGCCGCTTGAAGTTGAAAAACATACTACGATCAAGACAA GATTTGACGTCAAATCACAGTAGAGATTGACAGTTAGTTGGTCTCAATTT TTTTACTCCCCCCTTATTTTAAGGGGGGGGGGCAGAAACCATAATCAAGC AAACCTGTAAATCTTGGACCGTTTTACCAACCTCTTTAAACGTAGTAATT TTATTTTGTAACTTTCTTAAAGGAATTGCAACGATCAATCCAAGACAAGG AATATCAGGTAAGGATGAAAATTTTAGTCACATCTCATAAGGAAATTTCG AGTGGATTGCAATTTCATATTTAAATTTTCAAAATACCATTACCGAGTGT CTTTGACACTGACACTTGAAAAGTACAAAAGCACAGAAAATACATTTGAC CGGAAAAGAAGGCTTTGTGTTGATCCCTTTCTTACCACCCCTTTTTTCTA CTTAGAGTTTCCAGTCCCCCTACTTCTCGGTTTCTTCGTGAGCTAATCAT TCTGCCCTTAAAGAAAAGGGGGTCGGACTATGTTTACAATACTTCGTTTC GTCGTTGAAAAGTTACAATTAAATTGTTACCATCATCCAGTCAACCTCAA GTGATATTTTCTCATCAACAAAAACTTTGGACGATCTGAACTTCCTGGAA TCACCTGACGTTTCTTTGGCGCTTTTCATGAATGATAATGATGATGATAT TGATGAAGGATCACAACCAACATCGAATGATGAAGAAGTCATCTCTGGTG GTGAATTGATTGAAGAATCACGCAGTTGTGTATCATCGTCTTGTGGTGAT TTCGACGAACTGACAACATTGGGAAGTTATAGAGAGATTCCAAGTCCAAT CGAAATAACGCCAAACCGGTCGCGTAAGTTTCGATTTTATTTCGTTCTTT CTTTCAATGGGTTTTGATTAGGAAAATACGGAGAAACATGTTGGCTTTTT TTATAAAAGACAAATATGATAATAAAATGATACAAGAAGTGCGTAGTGAA GTTAAAGTCAAAAAAGGGGAAAGGTTTGTCGATTGGTGGATGAACAGAAT CTCTTTTTTTCTGCTGGAATGACAAAATTTGAATTTAAGTCGGACTTTTT TTGTTGCACTATAATAGAGCCATTTTATTGTGGATTTTTGAAATCTGCTT AATATTTTGCTCAATAATTTGTCAAATCATGTATACTAGTTATTCAAATT AAGTAAATCTTTGTTTAACTTTTGAAGCAAATCTCTAAGGAGCGTAAGAT TTAATTAACGCCAATTAAAAAGGCTTGGAGACGCTGTAAAATGTAGGATG GAAAGTGGCAAAATATTTTTCTTCACTGAAACGTGTGTTATGTTTTATTT GCTAAATAGATTCGAAATTACTTATTTTTTGCCTTTGTTTTACTTTAGAT ATTGAAGATAAATTTGTGAAAGATATAACGCCAACACGCACAAAAAGTGA GATCGACGTTGAACACTTACTCACGAATTCTTTAGAAAACAAATCTCGGC AAGAAGATATACCGTTATTGGAAAGCACTTTTATTATTAGTCAGTCTGTG GACTGTCATAATCTTTCCGACAGTGATACGAATCAGACTACCGTTCCGTC TTTGAAGGATACACAATATACGAACGTTGGTGTTGTCTCTACTCTTGAAA GTGTCGCCAGTATTTCAAGTGGTATTTATAGGAATATTGGAAGACAAAAC CCAAAATCACCTTTGGAAACATACAAACCCAACGATTGCAAGCCACCAGT AAATAACGGTGATGAATTAGGGCTTTGTATTGATATAATGGCTGCACGAA TCAAGGAATTAGAGCTCGAAAAAGAACGCGTGAAATTGGATGTTATTGTG GCTTTGCGTAAACAGTTTGAAAAACTTACAAATACGGATCATGAAATACA CTGTGGTACGCTGGAGAAATTGAACGATAGTGTTTGCGAAGTAGCCGTAC AGGAAGTGGAGAAGGTGCGTAACCAAGAGCGGGAGAGACGCTCCAAGATA GAGGAGGATTACCAGAGAAAGGTTGACCAGCTAACTGATGAAGTCCGCGA CTTACGGGTTGATAAATCGACTCTCTTGGCTGAAGTGAGTGATACAAGAC GCGGTCAGAGTTTAGTTCAAGAGAAACAAGGGAAACTGGAGCGTTTACAA AATCGTGTTTCGTATTTGGAGAGTTTGCTGCGAACGGTTGAGAAGGATAA TGAAAAGATGAAGCAGAATTTAAAAGAGCTTGATTGTGAGAATTCGAAAT TGTTGGTCGAAAATAAGACGCTGAGGAATGAAGTTGGAGATGTGTCGCAT CAGTTGGAAGTATCCAGGACTACTGATTCTAAAATGAAAGATTTTTATGA AAAAGAACGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGAACGGTTG AGAAGGATAATGATAAGATGAAGCAGAATTTAAAAGAGCTTGATTGTGAG AATTCGAAATTGTTGGTCGAAAATAAGACGCTGAGGAATGAAGTTGGAGA TGTGTCGCATCAGTTGGAAGTATCCAGGACTACTGATTCTAAAATGAAAG ATTTTTATGAGAAAGAACGTGAGAAAATGTACGATGAAAACAAACAGGTC AAAGATGAACTGACAGAACTTGGTAACGAAATGATGGTTCTAAAACAAGA AAAAGAGAAATTGGTCAACTCTAAAGAGACTGATATAAGTATTATTAAAC ATTTAGAGGAGAAATTGAAACGGCAAGGTGATTTACTTGATACAATGTCA GCAGATTCAAGTCGTTATTTTGAACTGAATATGAAGCTTGAAAACAAAAC TGCTCAATATAAACAGAAGTTAAAAAAGAGTGCATACGGTATTGAGAGCA CACTAGAGGAAAATAAACGATTGAAAAATGAGAAAGAGAATTTGGAAGGG GACTTGACAGTTTTACAGAAGAGTTTAAATGAATCGAAGAGACGTGAACA TGATATGCAGTTCCAGTTCAAGAAATTAAGAGCTGAACTTGAACAAAAAC AACGCGAACTAACTCTTCATAAAGAACGATTCCATGGGAAAAGCTTGACT AAATTCTCTAAGAATGGAATGAATGACTCGTATGCTGTTTTAGACCAATG GAATGATTCGTTAGGTCGAGTGATTACGTCATCAGTTAATTACCACGTGT TGCCTTGCAATGGATCACGTGTTTTCGAGAAACTCCATTCCGCTTCACCA TCGAAATTTAGAGATATGAATATTTTACCGAACAGAAATTCATTGATTAT TGGTAATTCGACTCATGAAGATGGTCTAACATCGATAAAATTCAATAACA CGGATCAAAAGTTTTTAAATAAATCCAGAGATGTTAAGACAAGTTTAGAC GAGATTGAAACTGAGAAATCTCGATCAATACGTTTCGAAGATTACCCTAG AGTTCATACTATCTCAAAAGTTAACGCTTGCGATACAGATGGAGATATAA ACCGAACTGTATCGACAGACTGCTACCAACAAAATCAAGCAAACCTATCT CGTCCAATTACTTCAACCAGAACTTACCAACAATCAGATACTACGGGACG TTTTAAAGACTCGTATAAACAAATTAGCAACAATTCTAGACATTTGGAGA CCACTTCCAAGCTAGAAGACCCTATAGACCGTATACAAGCAGCCAATAAA AGCTACGAAACTTATAAAACTAATACAATAGCGATAAATGGGAAAGAGAT AAAAACGTCACTGGCAAATAATCTTCAGCCAATGAGATTGTTCAGTGATA GCGAAAGTGGTTTTGAAGGATCGCCTGTCAACGGAGGAGATAGTGTGTAT CCAGCCAAAAGTTGGCAATCAACGACAAATGTTTCGCCTCCTTCAGAATC TGGACATCTTGGAAATCTTGAAAAGAAATACCGTGGCCATGATACGAAGT AAGTAATTTGTTTTTATTGTTGTTCTAGGATAGAGTTTAAGTTTTAAGTA AATAATGTTTTTTGGTTTGTTTTTTAATATCCAAACCAAAGATATCATAT CCCTTTACATACCAGATGCCTGCTAACTGCTCACAGATTTCCCGGGTAAG TGTTCAGTTTTGAAGTCCACCAGTCCAACATGTTGTTTTCTAATTTACCT TAGATTTTCGAACGTTCGAATTTCAAAATATTCGAATCGCGCTGTCAATG ACCAGTAAGATTTTAGTGTAGTCAGCTCTAAAACTGGACACGCTTTATTT CTTTTAAATGGGGATGGAAATTTGGAAGCACGATCCAGTTAAGTAGTTAG AGATCAGTGCACAATTATATAATGTTTAGCTGTTCTTGAGATATTGATTA ATTTTTTTTCTTTCTCAGGTTATTTCTACAAGAGATGCAATACAAATTGG AGCACTCACAAGCCGCCATGAAATTGGCGGACACCGCCCACATCTCGTCT ACCACTACAAATTTCTTGAATTCAGCCGAAAAGATACACCACAAGGTATA ATTGTAAATTGATAATATGCGAGTCGCGAGTTACTTTTTATGAGTTACGA GCTGCACTTTTAAGAAAACAAAATCGCGCAACTGAAAACTGAAAATTGTT GGATAAGACATCAAAAGCACCAGTTGCAAATTTAAAGTGCGATTTGCGAA TTAAAAGTGCGAGTTGCGAATTAAAAGTGAGAGTTGCGAATTAAAAGTGC CAGTTGCGAATTAAAAGTGCGAGCTGCAAATTAAAAGTGCGAGCTGCAAA TTAAAAGTGCGAGTTGCTAATAGCACACCGCGACGAATCTAAAAAAAGTA ACAAATCTGCACAAATTTATTCGTTTGTACGGCTTGTAATTCCATTCTCC TTTGCGTTAATTGCTCTTGCACTCTAATTAATTACAATATCAAAAGAAAG GTAATAACTTTCATGTTTTTCCAATCATTGTGGGATTGGAACTCGTACAC ATTTCTAGTTAAAATAATTATGACGTGTGTAATGCGGAGCGCTATTAAAA GTGCGAGCTGCAAATTAAAAGTGCGAGTTGCAAATTTAAACAGTTTGGTT GTCCTGATAAACCCGAGGTCCTTTTAAAGCTAACTTTAAAAAAAAACTAC AATACACCAGCAAAATAACGGACCTTCTCTTTGTAAGCTGAAAAAATTCT TAAAAATTAACAAGCGAGGAACGCAAATATATAATCGAGTTACGGAAATT TCGAGATATGGAGTAAGGTTTATAAGGCATTGAAAACTGAAGGGGCGAGA AAACTTTTGTCCGAATTAAGGAAACGAGAGAATTACAAGTTACACTCCAA TGTACCAATTTAAAAGGCCAGTTTTTATTCTTTTTTTACAAGAAAGTGAT ACCAACGCCAGTCAGCGCTGGATTTTGTTTCTGGGTCTTGTGAGGTCGAG CTGATGTGTAAATTAGAACCTTTTCATAAAGATGTCCAGAGTATTTCCTA GTTTAGTAGTTATCTTGTCTCTTGCTGTTTCTTTCTAGCCGATAGCCAAT TGGGCTCTTATTGGCTTGTTTGAATATCGGCCGGCCATCTTTTTTCAATA ATGCTAACTAATTAATGATTTGAACATACCGTAGCTTTTACTACTGTACC TTTTACTACTGTAGCTTTTACTTATTTTATTCTTTGAAAATAAACTTATT TTCAACCAGTTTCAACGATTCTTGTTTTCAATTCTACAGATAATGGATTT ACGAAATGAAGTTTTGGAATTGTGAAACATCCTGCATCGTTGTCTTCATA CCTGGATAATGTCAAGTTTTCAGCTCTCTACAGGCTTGTAATATTGTTTG ACCATTTACTGGATGACCACATTCTTGTCTCAAAGCTCTGGTAAAACCTT TCAAGGATTCAAGACGAATCGTCTTTATTTCATGATATGCACCACTGCAA TGTGTTCTTCACATCACGTAACTTTTCTCTTTTGTGTTTTTTTCAACCTA ACCCGCAACAAATCAGCTGAAGTAAAAATTGACGTAAATACCCGGAAGGC ATTGCAGGGGTGTATATCTTTAATATGCTCAGACAAACATCAAAACTTAT ATATCTTTAAGTAAATCAAAGCAACGAAGAACTTTAAACATTAGACGTCA TTACGTTTGGTAACCTTTTACCCAGACTCTTTACGCGTTAACCCTTTCCG TGCAAATGTCGAGTATATTGCCCAGTTTGAGTTAGAAATCGTCATTTTTG GTCTAACTCGTAGAAATTGGATTATGCTTCATGGTAAAGCAAAAAGAAAA ATCAAAAGTGAGTCTTTCCTGTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011857TCONS_00011857Clytia hemisphaericatranscript
TCONS_00011856TCONS_00011856Clytia hemisphaericatranscript
TCONS_00011855TCONS_00011855Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011857-proteinTCONS_00011857-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000133supercontigsc0000133:126735..135009 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.44 6.73 4.23 2.1 61.43 50.36 40 40.91 15.75 15.82 15.52 11.82 7.59 7.54 9.03 11.47 11.56 13.7 4.63 5.53 7.1 7.37 5.69 7.28 13.51 13.26 3.39 1.36 3.44 3.46