XLOC_007986 (gene) - C. hemisphaerica

Overview
NameXLOC_007986
Unique NameXLOC_007986
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000185:33956..44154+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007986 ID=XLOC_007986|Name=XLOC_007986|organism=Clytia hemisphaerica|type=gene|length=10199bp|location=Sequence derived from alignment at sc0000185:33956..44154+ (Clytia hemisphaerica)
TTTGgatgcaaaagaaaaaagagcttGGATATACACAGAAAACACACAGT
GCATTTGCACATTTTCTGGTGACACATCTGACTGCTGGTGAGAGTGAAAG
TGAACCAGAAACTGATTCCTCAAACAGCCAGCAAAGTGGAACAGATGAAG
AAATAATTGTTGCTGATGTTATTGAAAGTAATGACGAACAACAGATTGTT
GATGTCACTGGTGGTTTAGAACCTGAACATGATGATGATGGAGATGCTCT
TCAGCAAGATACAGAGTGAGTGATTCTTAAAAAAATCCCTAAATTGCAGT
AGCAatttttactgcaattgcggtataaaaattgcttttaaatttttcac
ataCTCAGGCAGTGTCAATTGAACTGTCTGATTATCtaactaatcgaact
taatcgaaccctatcaaacgatagctgttcgatttaccgaacccaatcga
acacctaGAACGAACtgagaaaacttttgtaaagTTTGACTGTTCCAtag
accagacccgatcaatcaaacttgtcgaaccaatcgaacaagttcaaaca
tcgaacgattaaagttcgattaacaACAAAATTAATCgaaaactaaaatt
tttaaaagattgagagtgttcgattaagttcgatcaatgggtttttgttt
gacaagtttgtgctgctccgccaccgtatattagcttcttttcaaagcca
aattcggaatgtaaatcaggaaattactttcgataacCGATTACACACAT
ATTTCCTGTATCCCtttagcgccagaggcggtttgttggggcgtagtatt
cTGCCAATCTGCCAcgcgcgaaatcgcaacagaggggctacagactttat
tccggatagataaatatccgggtacaataaacgtcaagtccgggaactgt
cgaaatggcaatcaCGTGCCAGGACAAaatttttgcaagcgagggaagat
atgacatgaggatttaatatcatcgaactaatcaaactttttactgaccg
aactaatcgaactgctattgcttcaaagattgtgagtgttcgattaggtt
caactaatttttttaatcaaactttaatcgttcgatggagtttgattagt
ttgattgttcgattggttcgacaagttcgattgatcgggtctgacATAGA
ACTATtgtggtggccgaattgccgtggtgaaattcccttagaaagtatgc
aaaacatatgctaaaaggaagtattaatataaaacttacatgcataattg
gcattatattaaagtgtaatcttgttgaagaaagattaaacttgcttctc
ttgaaatcttaaaataattatattcactcatctcttagaacaagcacttc
aaaaaaaccataacattagacataaataAACTCAAGCTAAAAAATCACAA
GCGAAGGTacaaaaacaatccttattcggctgacggtaaattattctcct
gggaatagaaccgccaaatgatcaaacagttagtcacactagcgtcctgt
caaaatgcaggttctGTTGACCCCGCCTGGACNgttagtcacactagcgt
cctgtcaaaatgcaggttctGTTGACACCGCCTGGACATACAGCAAATTG
CAATATTATGGCCACAATGACAAAGACTTGTGTTCGCATTGTCTGACCAA
CTTcttaattttctgattattttgagTCAGGCAGTTATGGAAAAAAGAGc
cattaattttaaatttccaaTATATTTGAATTCTACCCGACCccatattt
tgaaatcttttttttttgccgaccATCCGACTCATTTTGTTTTACCAAAA
AATGATGTGAACAGaagttatttgtgattgtggcctatataccttaagtg
gataaatttttgcgtggattaatttttgtggttttcgcgaatttggacca
tttttgcaaaaattaaggCCTTTGATTTGCGAAGATTAGTCCATGCGAAA
TTATTTAGAACTCTACAATCAAGAAAATAAAAGTTTGGGAATTCTAGATA
ACATGAAAGCTTTTGAGTGAACTTTGTCTGCctttgttcgattaaaaaac
aaatctcttttctaGTTACAATTTATAAAGTTGCGAAATTCAATCCACGC
GATAATTTATAAGACCCTTggttcgcaaaatttaatccacgcgaaatctt
taaattctcgTCTCACAAAAATTAGTACACCCAAAAaattatccacttaa
ggtataagAAACATAATTCAAGATTTAAGGAGAAAATAGGCAATTTTTCT
ATCTTTAGCTAAAAtgaacagacaaaatattttttccgtatacTGTATCA
GATTCTTTTGATACCCGTTTAAGCcttgcagtataccgcaattgagggaa
tTGTGTGAAATGCAGAATTGCAGGTGTTTTCAACCTTGCCAGTAAGCTAC
TTCTACAGTAAGCTACTGTAGGAGTACTCTCTagtcttgaaataaaaaaa
gcagTACCAGGCtgaacttaaaaaattgttagtTTGCCGTCACCTGACCG
ACCCTACCTCAAAACCTGCcaacccaaaaaaatttattgccattttaaag
aagatttttttccttcaaaaacttgaaaaaatcaaaaatcaaaatttgta
tcttgtttgtctctagcataagaatcgtaaattccctgctagcacttctg
ttttttattcaaaattacctaaatgtaaacaaactgataacccttccatg
gacaaaaatcgccaaaataaaaaaagattccgaccgacccacctccaaaa
tctagggtcgggtgacggcaaaccaacaattttttaagcccagcccCAGC
TAGATATATAtcgattctttttttaaattgaagcaAATTATAGGTCCTGC
TTTTATTATATCATCACAACTCATTGTCAACTCAAACAAAACTTGAGTTC
ATATTTTTGTCTGATTGTATGTTTGATGGCTTTTTGAAAGGAACTTAGGA
ACTTTTAAAAGGAACTGTAACCCTCAATGTAAATATAATTcggataaaat
caaagaatgaatgactaatttttcataggAATGTTTGATGATCAAATGTA
CTCGCAAAACAATGGGCAAAGCATTGAGCACAGTCATCTGTGAGTATAAc
cttttggacctaccctggtggggtggaggtcctataaattcacctctgtc
cgttcgtccgtcagtccgttcgttaccagtttttctcgagattgaatcat
aggaatcatttagtttttggtacaaaggtgcaaaacggtagtggccaaaa
tgggacggagcctgattttcgaaaacaaattttttgggcaaatttgggcc
aaaaaacggctaaataacaggttttttggactttgtgaaaaattggatca
ttaattttttctgatttttttgcatgaaagtagggtaccatcataggtaa
aagatggctcaagcagttttttgcaaaaaaaattatttggcttaaaaaac
gcatgtttatctataagaatcactattaataagcatacatcaattttttt
agtcaaattactcaatttcctatgagatagatgtttttttttgctcatga
gggcttacttttgtagaatatgtgtgtttagacatgaaattttggttgct
tggtgtgtttttatagaaaaactggccaagttcaatatttttttattagc
acattatcaattacttaggtattagcttttctcgagattggctctttcat
tctttatgattttttgcacaaagatgcataactataaactttcgaatgtg
actgagcccgattttcgaaaaaaaaatgtttttgggcaaatttgggccaa
aaaacggctaaaaaaaggattttttggacattgtgaaatattggatcgtt
gtttttttctgattttttgcatgaaaataggtaaaagatgggtcaagcag
atttttgtaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgcatgtttatctataag
aatcactattaataagcatacatcaatgctcttagccaaattactcaatt
ttttgatgatatagatgtctttttatgctcacaaagtcttgaatatgaag
gaatgtttcaagagcatgaaattttggtttctaaacgtttttttataaga
aacaaacgactaattttaatagatcgtcactatttgtgacATTCAtactc
acgtagatatcaattatatatgtgttaaatgcataaccaggtaggtccat
aaaagtatcacttgtttaaacTGAAATTCTATTACTACACATTTTAATGG
AACTGCTGTAAACAACGTCACTTGTCAGAGCtaaatgaatttaaattttt
ttctatctattttcattgaaaagtatgAATTCTGGCCCAAATACTTCTAA
ATAAAAGGCTTTTTCGTGAAGGTAAATTCCTCTTTATTAAGAATTCTTAa
taaatagacgatatcggttTTCCAAATTCTCCCCCAAATGATTgcccatg
atgcattgcacaaaaaaattcacgaaCAATATTGACATNGAAATGATTGC
CCATGATGCATtacgcaaaaaaattcacggacaatattgactttCCACGC
AATGCATCattggtaatcattcggggaggattgggaaagccgatatcgtc
tattgcaaaagtttatgcttgtattctcacattcaaattttttaaaaatt
tgaaaatctttgaagctgtgaaatcaaaatttaaaatgtcccTAGTAGTA
AAATCATTGCCTTAATTTTAACACtgacatttttaaacattttttagagG
AGCTGATAGTGAAAGAACATTGACAGCATTAAACTTGTCAACACATGATG
AAGGAAAAATGAGTggatttttacagaaatggcAATGAACGTGTCAAGGA
AATTTATTCAGACAGCCAGAGGGAATCAGAATCAAGTGATGAAGAAAAAT
CTGCACTAAATGTAGCATCTCTTGATGGTGGACAAATAAGTGACTGATAA
TGAATATGACGTGTTATTGATACATACACAGATACGGAAACAGAATCAGA
AAGTTCAAGTGATAAAGAAGAATCTGTTACGGATCAAATTGAATGAATAT
ATTGGGTATGTTTTGCTTACTTTTTACTTGATCATAATATCCAATCTGTT
TTTCCACTGGTTCTCAACTTcaattgagctagaatctgagaatgttaGTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattttcca
ctaaataaacataaaaagttagttacagcagtcaatgagctcataatttc
caaaagaatattttgcctgattttccagtttgttttgacagtcGAAATCG
AAAGTAGGTGGTttcaaactattgaaaatagtttgtttacattttctctc
cgtcatataagacatttcccgggatttaaaggcgtctttaaggcggtagg
gcggcttttcttaacaccacatgaaaaacgtatatttacggcttcggcga
tatattagaacgtaaatttacggcttcggcgtggtaaaggttaattCATG
GACATATACCTAAACTTCCACttacattttcatttgtcaGATATTTTTAT
GATCAGGCAGACATAGTCAAGAAAATTGAGATACAAAAACTAATATTTTG
TAGTATGAGTGCATAGTGCTTCGTGACTTGGTTTATTGTACACTCAATGA
TCGTTATATTTCATATCTAAAAACTTTGGGTTGGGAGACAAGATACATGG
TGACGACGCGCCCCTCGAACtagcttatttttttctatttattttttcat
atttttaaattattagtcaggaatattttttccatttttataagaaacta
ggGATTCCAGAGTTGTTTGCGACTTGCCTGTATCttgtgattttttcaaa
aacaaaattgtctCTCGGGATTGATATGGAGCGACGCGCTCCTTCTTCCA
AGGCGTTTGCGAACTACAATACTTTCCCTTTGAGCTGATTTATGCTAAAT
GGCATTAATAAGCAAAACGATCATAAAAAACCCTGACAAAGCATCACAGT
GTGTTCATAACCAATACAGTTAGTCAGCGtttaatgaaatattattttgt
tagatctggtCAGCTTAGTGGAGTCAGTCTTGGTTTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTtccatttttattagaaattagGG
ATTCCAGAGTTGTTTGCGACTTGCCTGTATCTTGtgagtttttcaaaaac
aaaattgtctCTCGGGATTGATATGCAGCGACGCGCTCCTTCTTCCAAGG
CGTTTGCGAACTGCAATACTTTCCCTTTGAGATGATTTATGCTAAGAcat
aaataagcaaaaaagatttaacCAAATCAATACCAAGCTACAGTTTATTT
ATATACCAAAGACATGAAGTTAGATAACTTTAGATGAGAAAtaatttgag
aatatttttctttgtttttctcttcatctgtctgtctgtctttctgtctg
tctgtctgtctgtaactTCAGAGATGTGTGGATTTTTTGGGTGAAATCTG
GTGTAGTTTTTGTTTTAACCAATAGGTTTATAGTTTCTCAGGCTTTGTCA
TTTCAAAATTCCTGAATCATTCCAAAATTGCACTcctaaaaagtacttta
ggcATGTGATGAGGAGTGCTATGAATAACTTTAGTAGTAAAATCCAAATT
CATGGCCTGTGTTTGATCGCACTCCTCAAgaattttaggtgtgtgtgaaT
CGTTAATTCAAACAACTGCGACccaagtttttctttatacaaACCATAGA
TACAACAGAACAtaaatttatctttaaaaagctttaaacactaaaataaa
atcctccaaAAGCCAAAGCAAGCTTGGAAACACAAAAATCCTTCCTCTCG
CTAAGGGCGTCATCTtggtttgaaaatgtttaaatcaaAATNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAataattgagttttaa
aaagaaatcatttgcTAAAAGAAAACTATTCAAATAATTGATAACCAAAT
ATGAGGCACTATTCCTATCACTGTTATCCGACAGATTGTCAtactttgaa
attgaatttcttcTATTTAGCTTATTTAATTTCTTACGTAGACAACATTT
CAGAGGAGCCGTGCTTTCAATATGTGAGAGGACCTGGAATATTAGTTGAA
AATTCTTCTTGCACTTATGGTAAatgagaaagtgaaaaatatgNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTGCTTActagtttgttt
ttaatttgattgTCTTGCCTACTTTTAATTGTGATTTGTTACATTCTAGT
AAATTTGTGTTCCTTTGAATGAACTGCTATAGCATTTTTATCTACTTTTG
GTTGatacaatattttcaaattgaagaaaaagtttgaatCAAACTGTGTA
atctgattaattttttttcactctaGTGATCAAGTGATTTATTTTGATGG
ATAATCAGCATTCAAAAGatgttcaacttggagaaatGGTAAAATTAATG
TTTCTTGGGTTTTAACGGAATATTACATTCTGCTGGGGTCTCAAAAGGGG
GTggcaaatgtttcatttcaggGTGATTCTGAAAAGGAGAAAGAAGGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014275TCONS_00014275Clytia hemisphaericatranscript
TCONS_00014276TCONS_00014276Clytia hemisphaericatranscript
TCONS_00014277TCONS_00014277Clytia hemisphaericatranscript
TCONS_00014278TCONS_00014278Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014275-proteinTCONS_00014275-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:33956..44154 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.18	1.79	0.88	0.29	4.28	3.19	2.73	2.69	1.77	2.82	2.57	2.2	2.42	2.84	3.12	4.59	3	5.09	2.3	3.82	3.27	3.68	3.43	4.33	2.96	2.03	5.12	1.87	4.27	4.29