XLOC_008715 (gene) - C. hemisphaerica

Overview
NameXLOC_008715
Unique NameXLOC_008715
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000214:358395..367618+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008715 ID=XLOC_008715|Name=XLOC_008715|organism=Clytia hemisphaerica|type=gene|length=9224bp|location=Sequence derived from alignment at sc0000214:358395..367618+ (Clytia hemisphaerica)
tgctgatttaccgtcgtcctcagctggtcaggatctactcaaattagaac
cttaccgtctccgtcgctgaaaaacacacatacataaactcgctattggt
TTGAGCCTCCACCGGCGGCGAGTAAAACATAACTCGCTATTTGGTTTAGC
GGGTGATACAACTCGCCTTTGCGCAACGCGCGGGCTGTCCACAGTTGTTA
GAAATACTTACGGCAGCCGAAACacgccatctttaattttctcAATCTCC
AAAATCTCAACAAACTCTGCCACTGACTTTGCCAAGCAGTTCCAGCATTT
CCATTGTGCATTTCTAGTAAATACCCAAGTCACTATATCAAAGGTAAGAA
TTTGTGCTTTTCATTCAGTTTGGTTCATTGACATACAATGTTTGGCTTTG
TCAATCTAGATTTTTAATATCCTTGCGATGTCCAATCCAACTGCTCAATA
ACTGTTCAGTTAGTTCTATTAGTTCAAACTAATTGAATTCTTTTcctttg
ataaaaataattttataagaacagtgaGGCAATATACACCTTTTTCCTTT
TCCAAGCTTCTCAGCCAGACGTCTGTGCTCGATATAGGATCGATAATCGG
AACGACTctatcgatatgtgatcgatagattacttaacgatccggatagg
atagaggatcgatactcaagattttttaaagcttatgattagttatcgat
tatttgtCGAtctcatcgatcttttatcgcaatcttatcgaccctatcga
ctcatactcgatttacgatcgataacaaatcgattaacgatcgataacaa
atcgattaacaatcgatgacgaatcgattaacaatcgatgacgaaNNNNN
NNNNNNNNNNNNNCTAGCttgataatggatcaacgaaggatcgatactca
agactttttaatggctgaatcttccatcgatctcctatccggatcgttaa
gtaatccatcgatccgCCATCGAGCcattccgatgatcgatcctatcgag
cgcggacagaggcggatctgggatttttctgagggggttcaaaaatctct
tttcaaaaaaatattttcggaaCAAACGTTTTGGGCGTAATTTTTGCACC
AGCCCTGTTTGGGCGGTGTCACCTTTTTCCCATTCAACATGGGGGGCGTT
AATGAGCGCCTGCACATCTGCAGTTCCCATTACCTATGAACTCCAAACAT
AGGCCTCAGcgggggaccattcaaaaagtacgtacgctcgaaaatggcaa
atttttgactccctctcccccttgtacgctttatgtgtacccccccttta
gcgtacgtacgctttttagtacaccccctaaccaaagtcgaaacttgtaa
ctcttgtaacagtagaatatgtaggtatccaatcgtatttataacaaagN
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NNNNNNNNNNNNNNNNNNNNNNgtaaaataatatcgagatatgaccaaaa
agaaaaatcagttccgatcagaaaactagatttcacttgaagaaagggtc
tttgttttttttatttactaaaaggCAGGGTTGGgctggttcagctgaac
catttgaaccccctcagatccgccgctgGCGGACGTCTGGTCTCAGGCAG
GCAGAAAATGGAAAGATCTAgtttcaatcaccaattccgcccttctcttt
ttctctatttcctatctctaactctgatttttctgatttctggacttagt
tttttctgaatttgactATTTGAAGCTATTTTGCTAATTCTGAAACTATA
CTCCACACCTcgattcgaaccaccaaatgcaagcaaccttgatatagacc
ttttcgcctttccatccgccatattgaattatatgcaaaaattatggtgg
ccgaattgtcgtggtgaaattcccttagaaagTATGCAAAACATATGCAA
Aaagaaagtattaaataaaaacttacatgcataattggcattatattaaa
gtgtaatcttgtagaagaaagattaaatttgcttctcttgaaaactaaaa
acaattttattcactcatctctaagaacaagcacttcaaaagatcataac
attagacagaaactcaaactgaaaaatcacccgcaaaggtaaaaaataat
ccttattcaaaggtaaaaaataatccttattcggctgacggcaaattatt
ctcctgggaatagacccgccaaatgatcaaatcaaaacattgataaagtg
tgactgctttcagtttgtgtgttttgaaagtttgatgtgtgtactccgtc
ttcgtggaattttttaatggcatgaaaacagaatatgcaatgtctttaag
aaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNtttggattaagaaattccatcttttattgttctaatgatta
tgatatttatttataagatgctttgttgtctttttaatctttgtgtaaac
ttgcatatgttttgtgCATACATttcaactaaatccaaccacggcatttt
cgttcctgtatttttgcatacaattcaagatagcggacggaaaggcgaaa
aggtctattggtttCCAAACCCGACCACTTGCGCTAACGAGACACAGCAG
TAAACAAAATGCCTGTAAATTACAGACCCTATATATTATAGCTCCCAAcc
ccctaccggtgcccctaaaAGGGCTGCTATGCAGCCCTATGTTTAGTCAC
AGCACAGGGTACGAAAAGTGCCCCTAAGAGGCATTTCTAAGAATTGCTtt
caaggttcaggtcccagaaAAAAAAGCTACTGTCATTTCTGGTAGTATTA
TTACTAGTTTTCTTTACGTATCAACATGGGACGTCAACCAACTGAGGAAG
AGAAGAAAGAATTCatgtacatcataaaaatgcggggttaaaaaaaattg
ggggtccaaattgaaaatttttaataaatgtTGCCCACCATGGTGGTGAA
ATTCCACTTAGCAGCTTTTAACTCCCCTGACACCctttaaattttgtaaa
attgactcaaaagtacaatttttgctgaaatttttgcCCCAAATTAGTAC
ATGTTGATACTTGATTCTGGATTTTGTCGAGGCTGGTCAAGAAGAACGCA
TATCAATCATATTGAATAACAAATCACTCCAGCTTACTTTCCCTCAGCGA
GTACCTACCTTGTCCCTAGGTAAAAAAGACAAATCATTTATAATCATTTA
TGATATGTTGTTATATGAGGTTAtcattgaaaacatttattATGCTGGAG
TAATAACTTATTCACTTCTCCCAAACAACTAACCTGTAATTGTTGAACAA
tccatcatttgaaaattccaggcgtgtggtcaatcacactcctaaaacct
taattttagtaatttagaCGTGTGATTAGGAGTGCTATGCTCAACTTTGA
GTTGTAAAACTAATTTTATGGCTTGCAATAAATCAAACTCCTAAGAAATT
TcaggtgtgtgtggaggtgtgcgcgtACTATCGCACGCCTCAAATGATAC
AGCCTGACAATCATCAATAGATTTAATTGATCATCTATCAATTCAATCAA
TTCAATCAATGAATGaataatctatcaatcaatagatattcaagTCTCTC
AATGATATTTTGATTATCTATTACCAGATCAGTTATATATTGAAACCAAT
CAATATTCCTTCCTGGATGGATTGGATATTGAGTTTCAGTCTGGATATGG
ATATGATTTCTTTGctaattcttttttaaaggtGTACTTATTTTTCTAAC
TAAAGTTAtaccactttgaaattttgaacttttgcttgaaaacaatagaa
aaaagtgtgaaaagtccctgaaaagtcccatttttcgagatttcaaattg
gcataacttgagttaagaaaataaatacaccgaaaaatttagaggttttt
cctaaaatcctagaagctatatctataggcaaaatatctcaaaccatctg
attatccctttaaaaaagaattagcaaagaaatcatatcatatttttatt
taagtttcttgttctaactttaaagagaaagaaGTATAATTGTACAATCT
AATCATGAAAATCAAGGGAGTAAACTAGACCCAATTGAGAGtctttcctg
aaaatttcaggtaGCACCAAAAGATATGCTCCTTTGAACTTAGCtgaatt
ttgtgaattttctgTAAAATCACAACTTtgtccgccattatgaatttcaa
TATGGTAGAAGATaacctaaaaaccgattttctgtaAAGTATTCCACCCA
AAGTTTCATTTTAATTTGGTTTTGAGGTTTTTACACCACTCACCGTGCAG
AATGAAGACATTTTTCTGGCCTTGAACtcaaattttcggtttttggaGCA
CTCTGCTGGGGGTCctaaaactttttttggaaatcttctggacagaaatt
tttatttctaataaggcaaatactttttatttattggtttacggatccgc
caacgttatttttgccaaaataaaaaaaaataagagaaaGAAAGAGGGGG
TTAAACGATCTAACACAGCTGTGCCCTATTCTGCCAATGTAAAGATACTT
TGATCCTTCCCTTAATTTCAGGGAACTTCCCCATGGAATTTCCCTATTCA
CAAAAACAACTTCAAGAGTAATTTTGTGCAGAAGAAGATTGTTGAAGAGA
GACTTATAAAAAAATCGATACTTTTTTCGAAACTTCATAAAATCTTATTG
TATTATTTTCCTACTATTTCtgattttaaaaaagaaaagaaaaaaattta
aaacatcaattttattttaattttttttccatcctcctgtccaaaacttt
tcctcataatgtccgtaaaccagaaaataaaaaagtaattgcctaatata
cataaaaaagttgaaaaaacctgaaaaaaatcAGCCCCTAAAACTAACTA
AATATTATCacaaattttccaaaacttgGGGGCGGAAATTGCTCaaatca
aaattctcaaaaccccATATCTTCAAAACTGCTTGAGATATAgagctgaa
attttcagggcaaaagttttcaccaaaattcaaaatttccaagacgagag
aagaaaatgtatgaatttcctaGGCAATTGGattaaaaaaaggggaaaaa
aagtggaatttccgatgcattttgtgaaagtacatggattttcatcagaa
tttccaaccaccactggaaaagaaaaaattatttctgaggctaaaaaaat
taaaaaatgcatgTCGTAACAAAAGTTTTCTGGGATGGCCCATTAAAGGG
ATCATTtgagcaaaatttcagcaaaatctgaGACATTGATaaatcacacc
ctgaagactattagaaaaaatggctcttaaaataGCTGCTAACcaataaa
aaaacaccaatcactcctgattttgagtatgatcaaaaataaaagaaagg
agTGGTGGTAATAAAAAATCCGCCATCACAACTGAGTGATAGGGGTGATC
CACCACGACAACCAAcactgatgatgatgatgatgtggCGACCATTTATC
TGTCTCGGGATGATGAACTAACCACCAACATCCTTAAATTTGGTTGTCAA
GCTTTCAAATTTAGAATTGTATGTGATCGTGGAGGGATGGGCGCATGCAT
GCTTTATAAGAAGTTATTAACAAGtttattttggttttgttttaGAAAAT
GTCTGGACAATCAGCTGTAGAACAACTCGGTTTGAGAACCGCCCCTTTTG
ATGCTCGCTTCCCCAACCAAAACCAAACGAAAAATTGTTGGCAAAATTTC
ATGGATTATCAACGCTGTATCAAAAATAAAGGAGAAGAATATGAACCAtg
taactttttcaaaaaaaattacaaatccaTCTGTCCAGTCGCTTGGGTAA
GAGCTAATTTACACTGATCAATAGCTGTACCATCAAGATTCCTATTCACA
GAAGTGTGTTCGGTTTTAGAGCTGACAAGTCCATCAAGTTGTTATCTATT
TTAAGATTTAAATGTTTGAAATGAAAACTTTCGCCAATGAAATCTAATAG
TCAAGAACAAAATAACAactctaaaatttgaaattgttaCATATCAAGCA
GATGTTCATTTTGTCTGAAAAACTGCTTTTGACTACAGTTTAACTATGAT
GATTTTATCTTGCGAATGGGTTCTcctggaaatattttttatagccCAGT
ACTGTATTATTACCCTGACATTTCAATCTCCAAGTTGCTTTCCAATGTTT
TCTACCCAAAATGTTCAATCTTAACCCCTGCCCTGCTTTTATTcgttttt
agaatcttttcaCCCACCCTACATGTTCCAATCTGCCGTCAATTTGCTAT
CCAAGAGTAATATTTTCTACATTCGTTTTTCAGGTTGAGAAATGGAATGA
CCAAATAGAGGAAGGAACGTTTGCCGGAAAAGTCTAATAATTGTACTTAT
TTTGAAATCctacatttttttaattatcagTTAGTAAATACgttgaaaaa
aatacttgcaatgtAATAtacttatttttgaaaaatacaatcaCGTGACC
TACTGTATGCTCCTCTCCGTAAGGTTTATCTGTGTTCTAGAATTTATCAA
TTACCCGAGCAATGGAGACTCATTTTGACTTGTTTCTTTTCACGTCTTCG
TCTGGGAAAGTTATGTGAAGTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015620TCONS_00015620Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000214supercontigsc0000214:358395..367618 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
249.36	261.9	304.35	342.04	154.79	126.64	192.64	213.84	249.5	212.44	219.91	243.85	207.41	220.35	208.52	221.5	367.96	372.57	120.07	114.78	294.69	286.63	195.9	180.53	289.63	270.54	207.79	153.38	161.46	147.77