XLOC_008892 (gene) - C. hemisphaerica

Overview
NameXLOC_008892
Unique NameXLOC_008892
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000222:85703..90314-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008892 ID=XLOC_008892|Name=XLOC_008892|organism=Clytia hemisphaerica|type=gene|length=4612bp|location=Sequence derived from alignment at sc0000222:85703..90314- (Clytia hemisphaerica)
TTTAGATGCTCCAACAAAAAATAATATACTATTGAAATAAACAAAAACAA ACACAACAAAATGAGTAATGGTCAAGTGATTACTGAACTTTTTGAACAAA TTGTTCACTCTGAAGAAAGAATCAAACAAAGATTTGAAGATCTGAAGAAA GGTATATGTTCTCTTTTGTTTTATTCGCATTTCTAGTTTAGATGACTGTC AACTTTCTTCCCTGCCTATTCTAATTGCCAGAGTAGGCAAAAAGTTGGCA GTTGAAGTCGTTCTAAAAAAATTGAAAGAAGTCAAAACTCACTGCTTAAG TTCCCCTTAAAGACACCCTCTAAATTTAGAAGTCAGAAACTATGACTTTC ATCATCAACGACCTGTATATTTTTTTATTTTAGTTAATCAAGAAATCCAA AACCACCAAGCTAAAATCAAATCCATCAAATATCAGAAAGATTCATTGCT TGGTAAATTGAACAACATGCGCCACAAATTGCTGGAAGAACAGTTAGAGG AGAAATGGATGAACATTCGAAAAGATATTTTATTCACACAGAAAGAGAAA TGTTTTAATGAGAAACACGAACTGGTATTTGAGCTAGTAAGTTAAGTTTG GTTTAGGGAGACGTTTGGCATTTTTCTTTGCTATATTATCTTATAGTTCG TTTTTCTCAATCACGGAAGGATCAAGTTTTGCGGCTCAAGCTGAAAATAA GCACATTCTCTGTCAAAAATAAAATATGATTTTCCAAATTAAACTCTTTC ATTGAATTGAACAGTTATTAACCAAAGTTTGAGCTGAAAATCGACCATGA AAGTGCTGTGCTTACAGTTTTGCAAGCCTGGGATTCCCATTTGAAAGACA CTTGGCCCGTACTGCAACATTATCTGCCTTGTAGGAAATGTTTAAGCTCT TCACAGTCAACTCTCTGTTATTCGAATCTTTCTGTAATTCGAATTAAAAT ATTGGTGCCCTCAGCTGGAAATGGTTTGAAATAATGTCTCAATTTGAATC TTTCCCTGATTCGAATAAAATTTTTGGTCCCTTGAAGATCGAATTAGAAT GAATCAACTGTATCTCACTATTTACAAGAAATCTCAATTCATAATTCATT CTCTCGTCTAGGAAGAAATACAGGACAGGCAAAAGACAGACAGGTTTGTC ATTTCGCTCAGTAGTTATTCATGAAAGTATGAAATTATAGTTGATCGAAG GTTCCATTATTTTCATAGCTCTAGAAACTATCAGAAAAAGAGATTTTTGA TTGATTGATCGATCGATCGATTGATTGATTGATTGATTGATTGATTGATT GATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA TTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATT GATTGATTGATTGACTGATTGATTGATTGATTGATTGATTGATTGATTGA TTGATTGATTGATTGATTGATTGATTGATTGATTGACTGATTGGTAGTTC GACTTATTGATAGTTCGATACATTGATAGTTTGATATATTGATAGTTTGA TTGATCAATACTTCGATTCATTGATTCTTTGATTCATCGATTCATTGATT CATTAATGGATAGTAGACTTATTGTTTGATTTAGTGATTATTCGATCAGG TTAAATTAATGTGTCGATTGATTGTTCGATTATTTGATTTTTATTTTAGT GCAAATTTCTTGGAAGCATGTGATTGTTTCCTTGAAGACTTTGACGTTTT AAGCGGCAACGGAATCATTGAGAAGAAGCAGAGCATCTTACAACAGAGGC TCTCTAATTTGAAAATCGAAGAAGACTCTCTGAAGAAAGGTTAAATTTTT TAATTCACTAAAGTCTGTTTGGATACTTTTGAGGGATCTTGGAGTAAGTT CAGCACTAAGGTTTGGTTGCTTTGAGACGATAAAGATAAAAATTCCTTAA CATGAAAGTCACATCGTAGCACCTTAATTTCATTATTTTCGCGTGGTTTA ATTTTGCGAATCAGCCAAAAAGTCGAAAATGGTCCTGACAACGTCAGTTT TTCTCACAAACAGCAAATTACAGGGACCTGAACTTCAGTCTCGCATGGAC TTGGTTTTGCGAGTCAACAATTTCATGCGATTTCACGAGTTTTATTTTCG TGAATAAAGCAAGAATTCGAGAAACTGTGAAAATTCATCCGAGTTATTAA GTAGTATTTTTAAGATGTATTTGAAAAACTACTTATTTTTACCCTCTTTT CTTTAATACTAGACATTTTCGAGTGTGAAAAACTGGAAGAAAAAAGAAAT GAGCTCAAGGATGATCATGAAAAGCTCAAACAAGAAATTGAAGAACTGAT GAAAAACAAAGATGGTATAAACATAAATTGCATTCAATATTGTAGTTTTT CATTATTTGGAATTTTCATAGGCCATTTCACAGTCGCAAAGCGTAATGGG TAATCAGGACCACTGCGCGATAATGACGACTTACTATTGGTCCAAAGTTT TGAAAAATATTTTTGCGTCTAGCCAACGGGAAGCCGTTATGGAGGCACAA CCTGTCCTGATTACCCATGATCTATTTTGACTGTGTTATGGCCTATACTT CACGTAGGTTTACTAATGCTACCTCAGACTGGGCCTAAATCGGCTAGACT TGAGGTCGAGAAATTAGCTCTATATTGACCGAATATGTGCCTTAAAAATA GAAACTTAATGTAAAACAGTGTCAAAGAGTTAAATATTTATCTCTCTTCC AGCGTCCCCCCCCCCCCCCTTTTCCGGGGGAGCACACCCTTTTTCATCTT TTTTTTTTTTTTTAAAATGAAAAAAAAAACCGGGCCAAAGAATAAAATTT TTCCTCTCCTTCCGGCTCCCCCCCCCCCCCCGGGTTTGCCGTGGACACAG TCCTTTTGACCTCTATATCTTTATTCAGAATGCAAAAAAAAATTGTTGAG CGCTCAGAGTGATTGTAAAAAGATGAAAGATGTGAAGGAAGGTTTTCTCC GTAAGTTACAAAACAATACGAATCACAGAAGGTAAGAACAGTATACTTTT TCATATGGCGCCATTACGTTTTGGTTGATGCTTTTAATGCGAATTTCAAG CTTAATTGTTCTTAAAATATTCTTAACATTCATGATATGCCCAATTTTTA CATCACTTACAACCGATCAGCTATTGGGTCCGTGATGTAATATCAGAAGA CATTGCAATGGTGCATATCATGAATAGCTACTTTGTTTATTGACTTAAAA GGGGCAGAATTAAGAACGACATTACGGTATTTCTAAAACTGAGACTTGGT TGTTAGCTTTTGGTCAAAATTGATTTGACTAATTTTTGCGGCCGAAAAAA AAAATCGAAACAAATTGTATTTCGGTAATTAATTTTCGTGGTAATCAGTT TTCTCGGTTGGGGCTAAATTTTATTAATATTTAAGTGATGTCAGAAAGGC TTTTGTTAAAATTTGACTCGATCATCTTCTGAAAAAGTAAAATTGTGAAA TTAACTTTTGCAGTTTCGTTAAATAAACAATTTAAACCGGGATGTTTTCG TAGATAACATTACGTCATGAATATCATGAATTGACAGATCTTTCCAGAGA CGTTACTAATTCATTGAATCCTTTTTTTGTCTTTTCAAAGTCTACAAAAC GAATTGGACAGAAGCAAGAAAAAGCTACAATATCTCACCGATGAGAAACA TAACCTCGAGCGACAACTAGCTGATCAGCAACGTAAACGGAACATTAACA ATGTGGAAACCAGACAGTCAAACCCATGGTACATTTCAAGGCCAAATACA ACACCTGGTTTCTCTCATCTAAATCACACGACGGTTTCTTCAGCATCATC GTCATCTTCGACGCGTCGTTTTCAATATTCCGTCAACAAAGGGGCGTCAC GCAAAAGACCAGCTAATGATGACGTCTTTTCTGATATGACGTCAATGTCA CGTGATAGCTCTCAAAATTCGCAGTACTCGCAAAACAACAGAAACGATAG AAACAGTTTTGACTTTGATATTGATGTAAGTTTGTTCTGATTACGTTGTC TAGCAACGACTTTCATTTTTACGAATGTTGTAATTTTAAGTAAAGTGAAA CCCTAAGTCACGATCGTGTCGTTATTTGTTTGAGCTAATACAAAGATTTA GTTACTTTTTTTATTCTGGCAGTTTCATGCCACTTTGGTGGCAATCTTCA CCTGTCATAACTGGAATGACTGTTGGCCGATCTTTCTGTAAAGGTTTTCC ATGTTTTTGCAAGTTACGTAATTTTCGCCATTATGGAAGCAATCGTTCAA ATCTGTGCGGTCCTTTACGCAAGTCGAACGTTTGCTTCCAGAATAACAAA AATTAAAACATGAAAAAATTTTTATAGTTATTCAAAGTTTTCAACTAATG CTTTTGGAGAAACAACTTTCAAACTATGATTGCATTTTGTTTTATATATT TTCAGTTAAGTGATGATGATATGCTGATGACATCATATTTGTTACAAGAA AAATGATCACTTGGATTCTGGTGTGTGCTAAAACCAGAAACAAGTATAGA CCAGGCGATGACTCACGGTCGCGCAACCTTTCGATAGAAAAACCCCCATA TGGTTTTTTGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015924TCONS_00015924Clytia hemisphaericatranscript
TCONS_00015923TCONS_00015923Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015924-proteinTCONS_00015924-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000222supercontigsc0000222:85703..90314 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CCDC172coiled-coil domain-containing protein 172 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.29 16.37 18.83 14.44 2.83 2.29 1.79 2.45 0.94 1.93 0.62 0.71 0.61 0.32 0.53 0.79 0.58 1.61 0.34 0.37 1.2 0.75 8.82 7.64 20.98 20.58 2.32 3.31 4.59 4.96