XLOC_012882 (gene) - C. hemisphaerica

Overview
NameXLOC_012882
Unique NameXLOC_012882
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000436:175570..181461-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012882 ID=XLOC_012882|Name=XLOC_012882|organism=Clytia hemisphaerica|type=gene|length=5892bp|location=Sequence derived from alignment at sc0000436:175570..181461- (Clytia hemisphaerica)
CGGAATTCTGACGGATTTTCCCTTTTTTTTCGAAACAAATATGGTAGACA AAGGAGCGGTAAATAAAAAATATTCTCCTTTCGTTGTTCTGTTGTCTGGT CAGCACTGCTACTCATTTCTCGCTCTGTTTCAATCTTTTCACGCTTCACA AGTACTTTAACTCGAGGAAGATCACATACTGAAAGATTTTCACATGAAGA ATTGGATTTTGTAAGTGTTTTTTTATTTTAATGTTCTTATTTTTGTTTTG CACAAAGAGTCAAGACATATAAGTATAGACAAATCAAATTTTTCAATCTG GCAGACCACAAGGACTGGACTGGAGTTTGGTTATTAATAGACAAAGGCCT TCTTAGGGGCACTGACCTTGTACCCTGTGACTTGACTTTGGATCCCGTAG GATCCTATGTTTGCTTCCACTGATGCAAATTTTTTACGTTCTCACACACA GCGGTAGGAAGGGTTGGGAGAGCTGTTTCTATTAAATTCTGTAAATTTCA TAAATGACAGTATTCCGTTGTGTCTCGGTGGCGTCTCGGTGACGCAAGCA GTTAGGCATAGACCTTTTCGCCTTTCAATCCGCCATATTGATTGAATACA CCTTATCGGAAATTCCACCTCCTCGCGTTGTTTATGCTACGCAACACTTT TTGGGAGGTAAACAAAGCGCGATATTGCGGTTTTCAGGCAAAAAGCCTTA CAAAACACCCAAAATATTGATGCCAAAAGAGCCTCAAAAGGGCTGCCATT GGTCCCATTTATGTTTACCTCCCAATTTCAACGGATCCATTTTTATAGCG CGATTGTTTTTGTGGAATTTCCAACAAGGTGTATTGTATGCAAAAACTAT GATGGTGGCCGAACATGCATAATTGACATTATACCGTGAGATTGGGTAAG TTGCATCAGTGGAGGCTAACATGCATAAAATACAAATTTAAATCAAAACA AAGATGGTAGAGTGTAGAGCTGCGAGCGGAGCTGCGTAGTTGTATTTTAA TGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAC TAGAAATAATCAAATTCGCTCATCTCTTAGAACAAGCACTTCAAAAAACC ATAACATTAGACATAAACTCAAGCTGAAAAATCACCCGCGAAGGTACAAT GATAATCCTTTTTTAGCTGAGGGCGGTAAATTATTCTCCTGGGAATAGAA CAGCCAAACGATCAAATCAAAACATTGATCTGAACCCGCTGAATGTGTGA CGTCATAATTACTGTTTTCAGTTTGCGTGTTTTGAAAGTTGATGTGTGTA CTTTGTCTTGGTGGAATTTTACTAAACTAAATCCAACCACGGCTTTTTCC TTCCTCTATTTTTGCACACAATTCAAGATGGCGAATGGAAAGGCGAAAAG GTCTATTGGGGTTGATAAACCAAAGGTTGCTATAATCCCCATGAATTGCA TCTCCCAAATGATCTCTCTCTTGATACTTTAATCAGATTAAATTTGCCCA AAGATTAAATTTCGCTAGCGAGAAAGATCCTGAAATTTTCTGGATTTAAT TTTGCGAGTCACAGTTTTGAAAATTTTTGCGTGGATTTAATTTCGTGAGT AAGCCTGAAAACAGCTGAAAAATAGCCATTTTTGCCACAAAATGGAGACT TCAGACTGGTTTTTCCGCTGAAAATGTGATTAAAAAAATTTTGTGGTAGA TTTAATTTTGCGAGTCAGAAATCATATACATTTTCGCAAGTTTTAATTTC GTGAAAGATGCAAAAATTTGCGAAATCGTGAAATATAATTTCGCAAAAGT TAATCTGATTAAAGTATGCAACGGGCTTAAGAACTGACATCTTGTTATTT AGAATTTTCAAAAGACTCACTCTAGATCATTAAAAAATTGCGTCATTAGT TATATCTTTGTGATATCTTTTTAGTTATATCTTTGTGATGCAAGAGGTAA GGGCATTTTTCATTGATGTCCCTAGCGGTTTAGTCGCGCGGCTGAGGTCG AAAAAAGTGGCTAGAAAATGATTTTCGTGATACACCTCTTAGATTCCACT TTTTTCGATGGAAACTCTCGAATTAGTATGTGTAGATTACAAAATCAAAA AGTTTCCACGATATTATCGTGCAAGTAACGAGTAATTGGCGATGTTTTGT GTTTCCAGGCAAAATTGCAAGGCCTGGAAATTCATGATTTTTGGGAGGTC TTCAAATTAAAAAAAGGCCTGTATCACATGATAGAGATCTTCAAACTGAG CAAAAAAGTGTATTACAGCAAAGTCCCAACTTCTCTAGATCAAAAGTTAT GGGCCTATTTGTGGTCAAAAAGGTGTTTAATTTTGCATAAATTAATGCAG ATTGTGGGGAAATTCCCTGTTTTCCATCAGTTTTTTAAAAAGATGAAAAA CAAAGAAAATTTAAGAATTGACTTTTTTAATATTTCAACACGAGTGATTC ATTCACCTTAGAAGATCATTACAATATCAACAAGACGACTCTAAGTCGAA AATTTCGCATATTATGTGAAAAAATAAGCCCAAATTAATGTTCAAAAACA GAAATATTAATGCTAAAAAAAGAGCTTTATAAAAGCTTTAAAAATGGATA AAATGATACAAATTATACCGCGTTGTTTTCTTATAAAAAACTTCTTATAA GAAAAATAATTGTGCTCAAATATTCTGCCCCATCCCTTAATTACTTTGTA ATATCTAATTGCCGAAGCCCAACGAACTTTAGTTCAATATTTATCAATTG TATTCTTATAAAAAAAACTTTATCTTTTAAGAAAAAGAAATGTAATCAAA TTCTGCCTCATCTTATAATTACTTTGCAATATCTAATTGCCGAAGCCTAA TGAGCTTTAGTAGTTACATACTTCAATAGTTACTAACTGTGTTCTTACAG AAAAACTTCTTATAAGAAAAATAAATGTATTCAAATTCTGCCCCATCCCT TAATTACTTTGCAACATCTAATTGTAGCCAAATGGACTTTAGTTCAATAG TTATTAATTAAATTCTTATAAAAAATTTCTTATAAGAAAAATAAATGTCC TTTAATTTGTTTACGTAATTGCTGAAAAGAAATATCATTTGGATCAAAAT TTGTTATAACAATATTCTTGCAAAGAAATCAGCGAAATAATTAGATCTTT AGAAAGTTCTAGAACATTCTAGAAATCATGTGAGACAGGGAGATGTACTT CTTGAAAAAAATATTCCGAGGACGCAGGCACGCACACAGAAGGCTATCGT AATAATTCGCTAAGGCGAAATTAATAATTTTACAAAAATATTTATTCAAT CGTAAGATATATTCCAGAGTTTGATTCTTGTCTCCTCTGCAGATTATATC GAGAACGATTTTTTTAAAGACACAGCTTATTATTTCAAACTTTGAAGTAT CAATTTAGACGAAATATTACTATTTATTTCTCACTTTTTAAAATAACATC TTTTCACGCAAAATCCACTATATTTCCTTGTGACGTCATCAACTACTCAA TAATTCTACCAGACTAATAGTACTAGGAGATCTGTTTGAGTCCCGATAAA AGTTTGGAAAAATATAGCTACGAAATATTTAATTAGGAAAAAAATACTTC ACTCTTAATTATCTTTTCAACAATAAGAAAACTACTATCTAATTCAAATT CTATAAAAGAGTTATAACCATTCTTTTCTCAGCTCCAGATAATTGAAACA CAACTTTTCCCCTGCTTTTTTATTCTGAATAGCAAACTCAGTTTTTTTGA AAATTAAAAATTTCTCCCTATTTTCCTTCAGATAATATGGCATGTTTGCT ACTTACAAGGAAGCTTTATGGTCAACCTGTGGTTCGGTCTTTCACGCAAA ATATCTCAAATGTGTCCGTGAAAACAAGATTGTCATTGCCAACTAGAAAG CCACAACAACTTGTGACGAGAACGTTCCAAACAACATCAAAGGTTCATGC AGCACCTCTTGGACCATTACTTGTCAAGTTATCATCGCCTTTATATCGCT TCGGATTTCTCTACCTTGGTCGAAGGCTTCGTCAGTATTGGAATAATTTA CCACCTGGTAAACGAGCAAAGTATACTAAAATATTTTCTAATAGTCGGAA TGCAATATTTGGAGGTGTTTTTGCATTCGGTGGTTTATCAGGGTTGTATT ATATTTCACATTTAGAAGAAGCGCCGGTGACGCATCGTAAACGGTTTATG ATTTTGAATCATTCACAACTAGAGAAAGTTGCAGCCTTTGAATGGCAGAA AATGGATGAGATGCTTGAACGAAAGAAATTGCCACCCCATCATCCTCTAT TTAAGAAAGTTTACAAAATCGTGAAGCGAATACTGATAGCCAATCAATCG AGAGAAGTGAATGGGATAAAATGGGAGGTCAACNATTCAAGAAGGTTTAC AAAATCGTAAAGCGAATACTGATAGCCAATCAATCGAGAGAAGTGAACGG GATAAAATGGGAGGTCAATGTTGTTGATTCTGATGAAGTCAACGCATTTG TTTTGGCCAATGGTCAAATATTCGTCTTCACTGGTATACTAAATGAAATG GAAAATGAAAACGAACTAGCAGGTGTGCTCGGTCATGAAATTGCTCATGC TATTATGGGACATTCTGCCGAGCTTCTTAGCTTAGCAGGATTTTTTAATG TATTTTCACTTGCGATTTTGACGACATTATGGGCGGTCATCCCCACTGAT ATCGGGGCGTTTGCCGCTTCACTACTGCAAAATACAATTGAAGACTTGAT TATTAACTTACCTTACTCACGAAAATTAGAGCAAGAAGCGGACGAAGTTG GTCTCTTACTGGCCGCGCGGGCGTGCTATGATGTTCGCTACGTGCCGAGA TTCTGGCATCGAATGCATCTAAAAGACGGGGGTGGTAGTGACGCCATCAT GAAATGGTTTTCAACTCACCCAACAAACGCCAGTCGTGTTAAACAAATTG ATGAACTGATGCCGGAAGCTCTGGAGTTGAGGTCTTCTTTCCAATGTCCA CAATTACAAGAATTCTATGATGCTTCTCATAGGTTTAGACATGTTCGATT GATTTGACCATTTTTAGCAGTGAATATTCTGAACTTTCTGAATTGATTGA TTGATGATTTAGTATTTTACAAAACTTTGTAACACTCGGTGGATGTAATA TTTTTGATATATTCTCTCAGTCGAAAATGCCTTCATTTACTTCACGTAGG CTTTTCATCAATTCGCCGATGATTTTACATGTTTTTGTGAGGCTTCTGTA AACAAACTTTCAGTAGTAGCGTGGTGACTTAGGCAAGTACCTCACCAAAA AGAAGGATTTTTTCATTCTGTAACTTACTTCTCAGAGAAAAGGCCGTGAA ATTGCCTGCTTCGTTAACACTTCCCCTTTTCCCTGCTAACACGCTACTGC TAACTCTCTAAAATAGTATTATAGTTTAAAGTAAAGGATAGCATATTTAG AATATTTTGTTCAGTTTCAATTCAATTTTGTACCATTTTGTAAATTTTAT GATTTTTGTATAGGCCTAGGTGTTTTTACACAACGTGATGTAGTGGGAAT CTAAAAAGAGATAAATGTTTTTTTTCTAACTCATTCCCGGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022920TCONS_00022920Clytia hemisphaericatranscript
TCONS_00022919TCONS_00022919Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022920-proteinTCONS_00022920-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000436supercontigsc0000436:175570..181461 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
OMA1metalloendopeptidase OMA1, mitochondrial precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.97 39.28 23.66 19.45 6.71 5.44 6.44 6.2 5.24 7.24 5.31 5.13 12.05 12.86 9.04 10.1 15.79 14.78 16.51 15.16 19.21 17.73 27.48 25.95 11.76 16.09 18.74 16.4 25.33 29.13