XLOC_015767 (gene) - C. hemisphaerica

Overview
NameXLOC_015767
Unique NameXLOC_015767
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000653:177865..189442+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015767 ID=XLOC_015767|Name=XLOC_015767|organism=Clytia hemisphaerica|type=gene|length=11578bp|location=Sequence derived from alignment at sc0000653:177865..189442+ (Clytia hemisphaerica)
CAATGGAAGAATCTCTTTTGGGAGAAGGTTCAGTTAATGTGGTTGGGGAT TCTATTCCCCAGTTTTTTAAAAGCCTGTGCATCCACTGTCTGAAGAAGAG CAATGATCCAAAAACTACtcttattttcaaacaagacTTTAAGCCTGGTC ACGtggaaatattgaaaaagaCACTCTACAGAAAATTGTTTGTGACATTG CATTCGCCTATAATTTTACCAACACCCAGAGACTATGATGATAAACAGAG CATTGGCAACAGTAATCCCGCCAACTCTTTAAACATTTATAGCGATTTAG CTAGAGATTGTTTTGAGTTGGATATGTCGGGTCATCACGAGAAAGCAGAG CGTTTACGATCATTAATAACAACTTTAGCggagaaaaagaatgaaaatat tAATAATATGTTAAAACTTTTCAAGCTGCTAGCAAGTTATGACACCTCAA AGAGTAAAACCAAGCGattgtttttcaatagagaAGATTACCTGCCATCT GATACTCTTTTTCAACTGGATCAGAAAGCATNAGATTGCTTTTCAATAGA GAAGATTACCTGCCATCTGATACTCTTTTTCAACTGGATCAGAAAGCATT GTCAATGGATGACAGTGGAGTCGATCTTTTTGGCAGGTATTATCTTTACT GATACTGATATTCACAATATGGCACAATGGTATGCGATCTATACTCCCTa gattttgttcatttttacaTTCAATCCTTTATTGATCCTAATCAAATTCA AAGGCGACCTTTCTTATCCCttctgttttcttttattttttgacttaAAT TACATATTCATATTTTCTTAGTGGCTTGGATGTGAATGATGACGTCAAAT TCAATATACAAAACACAGAAGACTTATTCTCAATGAAGCCAAGCACTGGG TTCTTTGGACATATTGTATGTATCAATATTACTGATTTCTATACTGTAAC TCCTCTTTAATAACCTTTTTGCTAAGCAATGATGGTAAAAATTAACACTG ATCTCCAAATCAACTTGATTATATGAAAGATATTGCAAACTGGTGTTGCT CTGATAAAGTCACTGCTCTTTAAATTCATAAAGCTAATTCTTTGCGATCT ACGTAATTGTTGGGTCCTCACAAGACCTGGTTGAAgaagagaaaagagaa agaaaaatttgacTAGGTACTGCAAAACTTGGGGTTTTTCAGGTcttgat tgaaaaatattatccTGTCTGAAAATCATTATTAATTTACTGTCTAAAAT GCTAATTTCTCAACcaattactttaatgggataaactttcgcggggatta aattttgcggatttcgcggatttgggtgtcatccgcgaaaatctgcaaaa ttaaatcccaatcgaaatttggaagggcctcgtccgcgaaatatttctaa acaaaactcaaaatatgtgaaatagatactatttgaatggttacttacAT CAAAGAaacgcaaataatgtgtatttcaacaaccaacatgcatgatttga aagtaaaagtcacaaagtggtgaaaatattgccacccaatagtgctaacc gcgaaattaagtccccgtgaaatttttgaatttcacgGATGggccaatcc gcgaaatttaatccccgcgaaagtttatcccattaaagagAATTTTTAGA CCTTGCATATCTTTCATCAGTTTTTTATTTACGATGAACTCAAAACACCA AGTACTTTTTCTAGAATCGCAATGAGTCAACATATTCAAAAGATGTTCGA TCAAACTTATTTGGTGGTTTGACCAGCAGCTTCACCACCTCTCTGGATGT ATCACTCGACATACCGGATCTAAAGGAACAACCATCCATAGACATCAGTT TGCCGACAGATACCAAGGACTTTTATGAGGTAACCATCATGACGTGAATC TCTAGTGATTTGATGACAAAGGAAAgttttgttatttatttcaCTCTACT AATGACACTATTAACATGTGACACTCTACTAATGACACTTTTCGCACTTC GGCGAATTAATAGAAATAACTTACCAGTACTTCAGACTGCTATCGATTTA CAatagttttttggaaaatgcACAAGTATTAACAAGAAGGGGATACAATG TTTTTACTTTTAATAAGATTAATCAGAAACCTTTTAAACCCTTTAATATt gatatatctttatttttgatttaaagcTATCTTCAGACGAAGGCTTCTTC GAGACCATGACTACGAACAACAGCACGTTGTCTTCAACACCACGTACAGA AAACTATATCCAATCTCTCGATCTGCTAGATGAAGCACTGAAAGAAAACC CAGACCAGAAGTCAACACTAGCCTGGGAATCAAAAGGAAGGTAAGTAAAT ATCCTGAAGGCCAAAATTTACGACATTTCTATTAGCTGGGTGCCGTGATA AACTGGCCTGGTGggttagtctagcaagctagacgactaattcaaacatt gtagaaataaagcaaaaagtaacggagagaacaaattttttatacaaact aaatcccgtaacaataatcgtacacataacgcctatactactttATTCAT ACAAGCACGATAAACGACATCAGTCTACTTGGTAGGTTTGAGACAGTTGT TCCTTTGGCTTTTTCTGAGGCCAATCTAAACAACCAGATTTTGGAGAGAA CCTGGGACTATGAAGGTTTCAAAAGGATTCTTATGATTTGATAGAAATAA TGATCAACAAAGTATGGTAGTTACTTTTAATTTCTATATAACGTTGTGCA TATTTGGAAACAAGCAGTCTCTTGCTTGATTGACTTTTTTTATCgattta ttcttttttattctcTATTCTAAATTTGAGACGTGGTGTACATGCTTTAT CATTTAAAGGCGTGCAATAACAAGCGCAGACGTCCACAAATCTTTGATCT AGGCACTGTGCTATAGTGGttattgaccttggttgctgcacaggcgactg aggttcaattcccactcggtgctatgattcacttggcaagtgaaaaaacc ttcgcccgggtcaatcTATGCCATGTAAGGGGGAAtagggtagtcagttc aaggtgctgacggggcgctaatCGAAAGCGTCgatagttgcgaaaatggg cttcaaagcctcctgcgactcaaccaaaatagaaaaaagcaCACCATATA TTTAGTTTTCACTACTAAAACTTGCACATAGCACTTCTTATCACATGTCT TGTatcaaaaagtaaattttgaggATTACCATTGACCATACGTCTgcatt ttttaaatgactaattCATtacatagtgcggaaagggatCTGATCCAccc ctccttgctatccccccactttttaatgaaaatttctgacccccgcttct tcacttttttggaaggtgtcattCCCCCCTTAAGAACTATGGTCATATGA GTGAAAGTAGAGATtatatcaccatatttccctaacaccctgtcTGGAAG TGCTtaggattcgaacacagtccattgtgatcgaaaccttcacactacca atcggcagaatgttagtgagGCACAGTGATAGCCTTATCCAGATGGTAAG TGaatgtataccgagtttatatcgttctacatctgcaatttgattAGTTA Agttaagtttgcgaccgcagtcgagggcgacctgaagactcccttttcgt atagctatctacccaaaggtaggggagggcaccactcctttccctggatt tctctcCTTACCCTTTATCTGTCTCTTTAGTTGatgagcatcaagcagaa aggcatcaagtaccattttgggaatctttggtatgacccggctgaggATC GAatccacaaccttgcgcaccgtagctggatgctctaccttcatgctact gTCACTAATGCTAATGTTACATAAGTTACTTTCTATTCTTGTTTTCCAGT TACAACGAACGACTGGACAACAATTTCTTGGTCGAACTAGGTGACGAGGC TTTTGACAGAATGtataaaatcaaaatgggtGAATTGGAGAAATTAACAG GCAAACGTGTGGTAGAAACGAAAGTATCAGTGGATAAAGTATTTCGTGAT acattgaatgttttgattggtGTCCAGTCTTCCTCGTACACTTTTCTACC GGTAAGGGATTCTTTTAGAGCACATCAGAATACGCCTCTCCATAAATCAT TTTGAGTGCAACagctgcctcgttttgaaaccattatcAAGGTGATTAAA TCTTCGAGTGTTACTTTAAATAGAACAAATGGTTCTAATGAACTGCTCTG GAAATCAATTACcaaagcaatattttgaaaacgaggttagcgttgctcgt gacgtaatttttgaaaaggcaaGACATGAATACACCCCCATCAACCCTTC ACTGCGCGGTCGGCTTTTTTAAGggactggtaatgaatttacaaggaacA TTTGTTCTCGGCGCACGGTATTTTAAGGCTCCAACTAAAACCAAGCAAAT TCTCATTAAAACTATAGAGGTATTTTCACAAGGCTCTGTGGTAGAGACAT TAGTAGCATTCGAATAACTTAACTATATTAACGTAAATTTTAAACTTTAT CGCTTCAATGCAagagaatttttcaattttgtattaTCGTTACCAGTCTC CTCAAAAGCGCTAAGGGTTTATAGGTGTATTCCTTTtgtttccttcaaaa tttggtTTTGGGGGCTTTTCTcttcgaaaatgaaaaacgattGATACcat tatttatttcaaaaatctaggAAATAAAAGTTTAGTTTGGCTGATCCAAA AATGCTAATGAAATTACAATGGATTGGTTCCTGTTTCGAAATTGTAATTG AAACCGTTTTAACGACCCACGTGATGGAGATAATTGGTGGCAAAACCACA CTATAGGGACTTTACAGaggaatttttccaaatttttcatttaatggttt ttgtcatttttgtcatATAAATAAAAAGGTGAAGCAGTATACAACCAGTT TAGTTTCTGAACAGTTAACTCTCGTATGGTAGAGAACTTTTGTAAAACTG AATTTGTAACAACTTTGGTTGGCCGGGTTTGGCAATCATATTAGAAAAGA TAAACTTACTAAGTAGGAAGATATTTGTCTCTAAATACCTGGACGATTAA CTATCATCTATCGTGTGAAGTATAAATTTAGTTTGTTAGTTTGGCGTATG AAAGAAACTAATCAATTGGTAAACCATTCACAGGCATAGTGAGGATATGG TGGTTCCAATATACATTAACCGTCTCCCTCCGCCAGCACCTACATCGAGT TCCACTTTCTGTCACACTCTTCCTTTCATATCTGATGGAAACTCAACATT CTGTGGACTGAAGGTTCTTTGGAAACCATACCCTGAGAACAGTTTTATTA TAGTCatggttatattttgttttatgTCGATCCCATTGACTTTGTACtgt tcaatattttcattctcATGTCTGTTAAAATACTGGAAAAAACTTTGCGA GGAAGGTTTAGATCCAATTTATATTGGTATCAAACCGCATCTTGATCCGT GcactatcaaaaacaaaaaaatattgaaattgatcaaatttgtCGAGATT GTACTTCCGATATCGTTCATGCTTCTTTACGATGCAGTTGACGTATGTTT GGATTTCAAGCTTTATATAGAGTACAGTTCAGGAAGACTTATCGACTCGG CTGTTTATGATCACGACTCAATGGTGTACATTTCAATGATGTTACTTCTA TTTGTGACCTACTTTTTTAAAATTCGTGCCATGATAATGGCAATGGATGA ATGGCATTCAAAGCAATCTGGATTCGATGAACTTAAGCTTCATCTGTTTG CGTTGGGCTTGGTGTATGAAAATGCTCCAGAGCTGCTGTTGGAGTATTTT TACATGGAGAAATATATCCATTCGAATTCAGCACAATGGATTGTTGTTAA GGATATTGTGTCTGGTATTTATGTCTTTGTGATGTGTGTCGTCAATTTCA TTGGTCTAATAAAAATCCTTAACAAAGAAAATAGAAGTATGGTCTTGAAT GTTATCATCTCAATAACTATGGTTGTGTTCGGTATAGCTTCATTTTTCCG AATCGGTGGTGCGGTATATCAATACCGAACGCAGAAAGTGAGACGATCTT GTTTCAATGTTTTCGAAGGAAGAATTATACAAACACCATTCGATACTGGA TGTTTAAGAGAAATCGATTATGTCGTCCTAGTCCTTGGATCCTCATCTCT TATTGGTGCTGCAGTTATCTTTTTTTCATTGTGCTCAAACTGTAAAAGGC TGTCAACGGTCGACGAAAATCAGTCGTAAAACAATTCACTCAAGGTTACT AGGCCTGCGGGATGACGGGTATGTACCACACGAGTTTCTGAATTTGGCAA AACTGGAATTTCATTGCCCTTAACATTGGTAATTTTCACAACCGaagtta tttttttatgatttttgagaTCCGTTCTCCAAAAAAGCACTCTGAAGTAT GGTGAGACATTCCCTTGCCCTCTACCGCCCAAGTACCCGCCCAGGTACCA CGTACAATTTGTTATCGATGATATCAACAACGttattttgaatgtaaaaa gaagTTTCAACAGAAGATAAACTCTAAGATCTAGACAATTGtattttaaa atgttatttgaCAAAGGAATACTGGAATTTTCAGACTTGATACAACCTCT CCCTTGAGATAGAGAATTAAGAAAGGACAAATCCACACACTCTTTTTAAA TTGTTGTAGATGCAACTTCATAGTTATACAGCcacaaattattattttac taTCAGACTTTCAGAAGTCTTATGTCAGTAGTATTATTTGGTGTTgtaga ttttatgattttttatttcagatgTAAAGAGACTTCGATACAAATAATAA ACATCTCTGTTTGTTCATGTTTCGTTTTTTACAGCTCACCGGGACCTTAT TACTATAGCGTACAAacttcgcgagcagaaactttcgtcaTTTTTGCGAA TTTCAGCCTTTTTCACGAAAGTGAAATGTTTTTGGTAATTCTTGAAAGGG CCACTCGCGAAAGTTAGTGCTCGTGAAAAATTCTTAACagaatagaaaat ctgtaaaacttaaaataaaatgtaacatttatggcactttttagcctgtt aaAGCCTCATGAGTAAGTCAAAAGACAAAAGTATTTGTCCCTCCAAGCCA TTTtttcttgtgaaaatttcattttcatgtcttgattcgcgaaagtttac gCTTACAAAAAATACTTCGTCGTCAAATTcccgaaagtaaatgtcgtaaa tttcgcagttattcgacctcgcgaaagctTGTACGCCTAACGTATGTCCC TCCCCCAGTTATCATAAGTTCTACGCCTCAGAAACGTCTTATTTTAGTCT AATTTACCTTGGAAAGTTAATGAACACCCCACCCCACGAACTCTAGTATA AATATTACGGAAAGTAACATACATGGCAATTCATTTTCGCATTAATCTTG CGAAAAACCAATTTTTCCGCTAAAAAAAATTGGTGAAGATGAAAGAATTT attacaaaaaaatcagaaCTCGATGAAATTATAGTTTATTGCCgaccaaa aaaatatcagcgttttgattggtcgagagcatcgagatatttgcgatatt tcatatttctttagtctggaaatatgaccgcgttgactcgatattttact cgttccgagattttaccgatattttatacgaaataaaatatatacggaaa aatctcggaactcgtaaaatatttctcgtattgcactcgaaatcatgcga taactagtacttatttttttctagacCTATGTTTAAAATACAATAGAGCC TTATTttactcgaacctctataactgaaacaagttttatggtctttctaa caatgtcttataaaccaaatcccataactcgaaatttttttaacttgcAC AAATGTTTCCAGTACGGgttccactgacctttatataaccctggaccaag caatatctgccatctttgattggagtttttttggaattggtacccgagga caagccattgcaatgttaaaaattaacgtctaacgccgctacatcatcaa aagaatttgaggaaaagtagacctatcgctctcgatgcatttacaccgct attagggtaccaattttcaaaaaactccgatcaaagattttgcttggctg ggattgagaaccttggtccagggtatataaaggtcagtgactgGTTCGAG TTGACGTCACTGTATGAATATTTTCCAACTGTTAATTTCATcagattttc ctttttgtatCTAGGTTTCATTTTCACTTGTCGCATCCAAAAACATCCAT TGTACAGGACTTAGTTCAGATGCTCTTCATTCTTTGATGGccaaatttgc ttctcttggcACCCATTATCGTCAGTTGAGAAAATTCTGCTCTCAGCATG CAGATCGTCCGAAAACTGGACACTCTGGCGGTTCATTGTTGAAAGCCTTC ATTGATGCGATGAAAGAGATCCTACAATCGTATTGGTTTGCTGTGTTTTC AGCTTCaggtatttttgcaaaaatatttttctcaagtcATTAGCAGTTAT AGATCTGTAGTAAACGGTTAATGGTCAAATAAGAAAAGGTTCCAGGTTTT TAATGTCATATTGATTCAATATTTTGTAGATACACTGTTACTTAGTAATC GTACATTCTCTATTCAAGAATCATTACTTATGGCAAAGCCGCAAATCGGG ACATacgaaaatgtgaaaaattgttAATAAACTTCTTCCAAAGTATTTGC CTGAATAATTCTTCTTTTCCTCTATAGAAATGAAAATGGTTTTGACAGAG TTATGGCATCTTTTTGAACCTTTCTCCAAACAATTCAAGTGAGTCCATCA TCAAGAGACGTCCTGTGTATTCCTCTTTATCACTTCGTGCTTTCTCAGAc agttttgattaaaaacacccccttctcacagatccagtACGCGGTAGCCA TTGAGGGTAAAttaacggactaaaactcgatggggatcgatattcccatg ttttttttattgctgGGGATTTGTATTCCATTTGTTTTAaagttaataaa aaaattatacaatattttgcagtgtggatttgtttatttgataacttcca gcggggacaaaaatcgGAGTATGATGTTCCACTGGGAccatattttgacc aatttttccacAGGGAGGGGTcccaccaggtctgtgagaaagggctGTTT CATAATACTGACtcgtgaaaaaatatatttcgcgTTTCTTTCTGAATTCG AACAAGAAAATAACATACTTTGATTGAAAGACTACGGGAAATATTATTTA TTAGATCCACCAAATATGATCATAACCCTCTGATTTTCTTCTTTCAGGTT ATTAGCAGACATTTGTTTGTGTTCAGAAGCTTTTCGAAGAACCGGTGGCG GCGGTGGTGGCGGTGGTGGTGGGCGTGGTTGCAATAAGCCAAAGTTCCCA GTGGTATAATATAATATTTCTTACTTTACATTtctctttttaataaaatg aaCACTCATGCACTcatatttgaatatttcttttaCATAAAAAAGTGATC AAATTTAGTCAAGAAACATCTCATCACTTCCATAATAAAACAATATCGAT TTTGCGAAAATCATGTGAACGAAATACCACTAGAATTTTCAAGCTGGATG CACATTTTTCTTGGACTCCATTTTTAGTCCTTGCGTCATGGGGCTTTTGC CCCATTTACCCATGATCCATGATTGATCATCAAACAGAGAGACATCATGC TTCATTTCTAAGTCCCTATTTTGGATCCTTCAACCTTCAACCTTCAACTT GGTGAAGGTTTCGTGTAATCAAGCCACGGCATCGTGCGACGTAATActca agattggtcagaaagaggaaaagaaaaacattttttgcttatattagcat aatataacaataggcagtcactgtcctaatatgaaatatatgtctgatat ggaacgggaacacttatgtaaaaataaaatcttaaaCTTATGGATTAAGT TTACGTTTTACACCACCAATGAATCTTGACCCCATTTcctttctttatat ttttaggGGCCGGCCTTGTTATCTTATCTATACTCCCTTGCTGTCAAGAA TTCGTCTACCGAACACTTCCGcatgttattgtatttgttCCGTTGCACAT CTATACCGTATATCAAgtaagaaaaacaaacattcaaGAATATAATGTTG TATGATATAGCCAGAACCTCACCAGCAACAAAGTTCTCCATTGTCCATTG TTCGTTGAAATAACAGAAATAAAAAAGTTGTACTAGGTACTAGCTGCcct tagagcaaaaaaatcaaaagttcacCTCCAGCTTGTATAAAATCTACTTT CTTATTGAAAGATAAGGAACGATTCTAACTTTTAATTAAATTGATTGATC CTCCTGAATATTTTCAACATAAAGTTCAAGCACCgaagcgttttcatttt atttgaataaaatttaaaacatatattttagacgtttcggtgtcttcCGA TCACCATCATcagtaaaaattgaaatgaaattctcTAAATTAAAATGTTC ACAAATTCtaacttttttctctttcttcttctttagtTTCATATCAGAAT GGTTATTCCATGGAGTATGCCGTGACCAGTATGACGAATTTTTTGTCCAA TTAGACCAGCAATATTTATCCTACCGAGGTAAACACGTTCGcttattctt attttatttaACATTCGATCACACAAagctagcgcaaatagaaaagggga tagactcgcCACTCCTAGCTCTGCCGACGagtatttgtttcatttgtcgg acggaaatatttttgatagtcAGAAATAtcatggtcggaaatatcatttt atggtcggaaatatcatttttatggtcggaaatatctaaaactggaattt ttttttaaatcatgggGAAATGGATGGTCGGGAATAATATCCCGAGCTTC TTCTCTACCATGTTTGTTTATAAAATTTGCTGACAAAGCATATTTTAAGA AGctcgggatatttccgaccatcaattTTTctacgattttgaaaaaatcg aaagttttagatatttccgaccatcaaatgataccTACGACCAGTACGCg aggatatttccgaccatcaaatgatatttccgaccatcttATGATATTTC CAACCATTACGCGAGGAACTTTACTCTATTTTTAAACACTCATGTTATGC TATTTCTCTAAAAATTTAAAGGCTTTAAAGTTCAAATTTGTTCTAAATTC gttattttttttatgttttggaGCACCCCATGtcttctaaaaatttaaaa taaatatatataggtattttacattcattttttttttcatgtttgtttca gataaatatttttggtcaCAAGGTTTTCGCATGAAAGAGAGCAAAGCTTC GGTTCCATTGTTCTTGGATGGATTAGCCAATCAGATCTTCTCTTGCGGAA AAGCTATCAACCTCCTCAAACTCACCAATATACAAGTAATTCTTTACATA GGCGTAGCGAAATACCCtgcagtgtcgtaaaaaccgctctcatccataaa ttttgcagggtatctcgctacgcctatg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027896TCONS_00027896Clytia hemisphaericatranscript
TCONS_00027897TCONS_00027897Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027896-proteinTCONS_00027896-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000653supercontigsc0000653:177865..189442 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.02 4.85 2.81 3.03 12.92 8.96 10.31 10.61 5.5 8.35 7.1 4.51 6.95 7.02 5.39 8.73 7 9.2 4.16 5.94 6.18 6.49 4.57 6.83 12.67 11.65 4.48 3.39 5.56 6.66