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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014795 ID=TCONS_00014795|Name=TCONS_00014795|organism=Clytia hemisphaerica|type=transcript|length=1039bp
attatagaaaaataaaataagagcCTATTGAAacgaaaacaaaatggcgg
atgaTGAATTCGAAATTGGTATTGCTTCAGatGATTATGGTCCCGAGTAT
CCGGCATTTTCACTATCAGTAAAAGAAACGGATACCATTGgtcacatcaa
aacaaaaatcgaaGAACGTATCAAAGTGCCGAGTCAGCATTTTTATGTAC
GAAAACGTGGAATGATAGAggttgaaaatgagaaaacgGTGAGTGATTAT
CTCCAGGATGGGGAAAAGGAATATATggagtttgttttgatatacaTTCC
ACAATTTTTAATTCGTGTATGTTTCACACGGAGTGGTCATGTTGAAGAAC
AAACTGTACTACTAACTGAAAAACATCGTAAGAATCTTGGTGATTTAGtc
acagagattgagaaaaaatataaacttAAGAAAGGTGAATTGAAATATGT
TCATCAAGAGTCTGATAGTTCATCGGATGAAACAAATGATGACGTATATA
CAAAATGGTTGATGAATTTGTGGCGAGAGAGgaaatatgttttgaatttt
gaaacagaCGCAAATGTCGAAGACAAGAAATGCTTGGTGATGTgatattt
tgaaagtaaaatggTAGATACATCAATGATcgttttgaaatatattgaga
ctttaaaacactttttaaaaGGTAAATAGAAACATTTGACTGTCGTCTTA
CAAAATGCACTTTTAAAAACAACATGTCTTCTATAAAAACTCGGACTata
tgaaatgttttttgataGTTTGATGAATCATAAAGTTATTGCATAAATCA
TACTATGGTAAGTCTCTCATTTATTCGTCGAATTTTAAGAACCCTTTCTG
GTGATGGCTATGGGAGATGTTTCCATTCAATATTCATAAGAAGCATATTA
TAAGAGAAGAATTACCGTGGATGTTGAGGAGGGCATTTTTTTTGTCCAAG
GGACcccctttttggacctacctccgggtgccccggtggaggttctataa
attaacccatgtccgttcgtccgttcgtccgttcgtccg Run BLAST on NCBI transcript from alignment at sc0000198:391296..392910+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014795 ID=TCONS_00014795|Name=TCONS_00014795|organism=Clytia hemisphaerica|type=transcript|length=1615bp|location=Sequence derived from alignment at sc0000198:391296..392910+ (Clytia hemisphaerica)
attatagaaaaataaaataagagcCTATTGAAacgaaaacaaaatggcgg
atgaTGAATTCGAAATTGGTATTGCTTCAGGTatgttattttcttctttt
tttttaacttaagATCTGGTagtttttaaagggacataaaagtactgacg
aaatttgtaaacaaactgtatgtagcgggatacaaaatcaaaacaaatgc
tacatgtcaaaatcaaaaatcaaaccaaatatggctgattttgattgttt
caattgttgtttcaagtttgttttggacacgtggttttaattgttctctt
taatgacatgtggttcgcgcaatgtttacattttactatttttatgtccc
tttaaaaaggAGATTTTCAGTTATTTTGGAGTGTTTGAAATGTGATTGTG
ACGGATATGGTTAccacaaaaacttttttggtaACAGATTTCCCTCAAGA
TTTACTAAGTATTTGAATggagaattaaaatttttaacacGAATTCTCCT
AAAATTATGCTAAAAGTTTGAATATTTTCCTAAATTTAATATTAGCCAAA
ATTTATGCTAACATTCCTCCTAAAATCTTGCTTTTCAGGCTTTGGAGGCC
TAAAAAACAAAGAGAtgcttaaaaaatcttgaataagcttttttcatttt
tagaagatGATTATGGTCCCGAGTATCCGGCATTTTCACTATCAGTAAAA
GAAACGGATACCATTGgtcacatcaaaacaaaaatcgaaGAACGTATCAA
AGTGCCGAGTCAGCATTTTTATGTACGAAAACGTGGAATGATAGAggttg
aaaatgagaaaacgGTGAGTGATTATCTCCAGGATGGGGAAAAGGAATAT
ATggagtttgttttgatatacaTTCCACAATTTTTAATTCGTGTATGTTT
CACACGGAGTGGTCATGTTGAAGAACAAACTGTACTACTAACTGAAAAAC
ATCGTAAGAATCTTGGTGATTTAGtcacagagattgagaaaaaatataaa
cttAAGAAAGGTGAATTGAAATATGTTCATCAAGAGTCTGATAGTTCATC
GGATGAAACAAATGATGACGTATATACAAAATGGTTGATGAATTTGTGGC
GAGAGAGgaaatatgttttgaattttgaaacagaCGCAAATGTCGAAGAC
AAGAAATGCTTGGTGATGTgatattttgaaagtaaaatggTAGATACATC
AATGATcgttttgaaatatattgagactttaaaacactttttaaaaGGTA
AATAGAAACATTTGACTGTCGTCTTACAAAATGCACTTTTAAAAACAACA
TGTCTTCTATAAAAACTCGGACTatatgaaatgttttttgataGTTTGAT
GAATCATAAAGTTATTGCATAAATCATACTATGGTAAGTCTCTCATTTAT
TCGTCGAATTTTAAGAACCCTTTCTGGTGATGGCTATGGGAGATGTTTCC
ATTCAATATTCATAAGAAGCATATTATAAGAGAAGAATTACCGTGGATGT
TGAGGAGGGCATTTTTTTTGTCCAAGGGACcccctttttggacctacctc
cgggtgccccggtggaggttctataaattaacccatgtccgttcgtccgt
tcgtccgttcgtccg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014795-exon-sc0000198-1491911889:391296..391375 | TCONS_00014795-exon-sc0000198-1491911889:391296..391375 | Clytia hemisphaerica | exon |
| TCONS_00014795-exon-sc0000198-1510915933:391296..391375 | TCONS_00014795-exon-sc0000198-1510915933:391296..391375 | Clytia hemisphaerica | exon |
| TCONS_00014795-exon-sc0000198-1575043694:391296..391375 | TCONS_00014795-exon-sc0000198-1575043694:391296..391375 | Clytia hemisphaerica | exon |
| TCONS_00014795-exon-sc0000198-1491911889:391952..392910 | TCONS_00014795-exon-sc0000198-1491911889:391952..392910 | Clytia hemisphaerica | exon |
| TCONS_00014795-exon-sc0000198-1510915933:391952..392910 | TCONS_00014795-exon-sc0000198-1510915933:391952..392910 | Clytia hemisphaerica | exon |
| TCONS_00014795-exon-sc0000198-1575043694:391952..392910 | TCONS_00014795-exon-sc0000198-1575043694:391952..392910 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000198 | supercontig | sc0000198:391296..392910 + |
Blast
The following BLAST results are available for this feature:
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