XLOC_038196 (gene) - C. hemisphaerica

Overview
NameXLOC_038196
Unique NameXLOC_038196
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_349:793052..798776+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038196 ID=XLOC_038196|Name=XLOC_038196|organism=Clytia hemisphaerica|type=gene|length=5725bp|location=Sequence derived from alignment at scaffold_349:793052..798776+ (Clytia hemisphaerica)
CAAATGATAAAACTTCAATAGTTttgtaaaagaagaaaatcaaggtATTT CTACAAAAACTTTCTACAGAAAATATACTACGCTACGTTTATATGACAGA TACGTTCATGACGAATACTTTACAGTGCAGAGTAGCAGCATATTTCTGTA AACTTGAAACGAATTTTTAGTATAGAAGAAGATATAGTATAGACTGAAGA TCGTAACGAAAAGTTgcgtgaaactttgagtatcaaACAATTATAATCTC AACTTCAAGTTATTGCGTAAACTCTGGTTCAAAAATATTTCCGTTAATCT CACCATGAAATCATCGCGTTTGCAGTTGTTGGTCTTTATATTATGGACTT TATTATGGCAAGCATCAGCAGCAAGAGATATGTGGGATCCAGTTTTCCAA AATCATACATCGCGCGTCCAATCAAAACATACAGCGTTAATCACTACGAA GACGATGcgttttaaaaacataaaagcaGGTAAGGATCTATAGTCTAAGT ACACCTTTTCGGCTtctggggatcatgtaaaagatttctttcgaaagaaa ctcacttcaattacaccAAGAAATTACACTTGAAGGTTtttggggaattc gtaaatagtaaactgcatactgatacagtctgctagacattaatatggta atatttgctcttcatctttgattctttctacagtgattagactgacacat gcgcgataaaatctatattattggtcttcagaggttaatatattctttga aaacttaacctctgatactcagggtagcaaTTGACAgctatggtcgaaaa ggtgtattagaagCAGTTCAATGCATAATCTACACAATATATTGCCTACC TGTCATATACCTCGTACATAACGGTCTGCAAACTACAATGTTCAATGTTT TTGAATTGATTTAATCGCGCatgctttaggcgtacaaactttcgcgagca gaaactttcgcgaggacgaaaaatcgcgaaattcacgacatttactttcg cgaatttaacgaaaaaatctttttcgcaagcataaactttcgcgaatcaa gatgtaaaattgagaattttcacatgaaaaaatggcttagaggggcagat acttcttggattggcttgaaacatttgtcctttgacttattagtctttta gcaggctaaaaagtgccataacagttacattttattcaaagtttgagGTT TTACAGATTTTCtattttgtcaagaatttttcgcgagcataaactttcgc gaatggtccttcctagaattttttaagacatttactttcgcgaaaagggc caaaattcgcgataCGCCTAAACGGTTAGGGTTAAggatttttgtttact ttctgaAAAAGGTTGTATGATATCATGATAGTCAAAGCTTTAGGCTGTGA ATGAATTAGATAAGATGTAATCCTTATAAGAACCATAGTTgcattgacac ggatgtggagcaagattggtcagaaagaggaaaagaaaaacacttttttg cttatatcagcataatataatcgatataacaataggcagacactgtcctg atatgaaacggacaTTTATGTAAAAATGCCCTCTTTTGACTTCAATGCAa ttacttttttcaattttttcaagcaTAGATCTTAACAGCCAACTTTGTGT CCACTTTCTGCGCCTACTCTNTAAGCATAGATTTTAACAGCCAACTTTGT GTccactttctgcctactctaacaattagaataggcagggtaGAAAGTCG GccatctaaactagagcttacagtatatgtaaaaataaaatctcaaGGTA TCTtctgttttgtatttttcaaaggCTGTATGATGGGGTCTGGCACCATT CGAGATGTTTTCGAAACAGAGAGAGGGTGTGCTGAAGTATGCATGGATGA ACCAAGATGTATCACATGGAATCAACCTGACCAGAGCTGTATGATTTATG ATAAAGTATTTCGAGCCAATCCAAGAAAGGTTTTGTATTACTATGGTGGC GATTGTATTACCTATGAGGTTTGGGTGAGTGATCAAAAACTTCGAAATCA GTAAAGCATCAAAAGTTTTGTGAACTTTTTTGAACGACTCTCATTTTGAT TCTGTATAGTAATTTTGAATAAGTTTGAGTGGTTGCTCCACAAAATACTG ACCATCGTGTTAGCGATTGGCAACGGTTTTTTTGGCACTCTGCATAAGTT GAGAATTCAAATTcctttctaaatattttttaaaaatcttttcagAAAAA CATCGGGTGAGCCACCGGGGGGAGGGGGGATTCGATTTTTTAAACGACGG TATGTTCCGCAAAAGAATTGGGGCTTTCAAAATCAGACCCTTATAGTGTA GctcttgagcagtgaaaagatACCCTTACAGAGCAATTTACCGAACGTCT TTACCCTTACAATGGAGTTTGAATGCATTTCTTAGTTTGCTGAAGCTAGC CAGAAAGAGCCTGAGATGTTgacacaatgtgcaaaacaaatcaaaatggg tacACCTATAAAGAGGAATAGCTCATCAAATTTTTACTGTCGGCCTTGCA ATTCAGCAGTCcgaaaacacacccttacagtgtatccagctaaaagaaga cccttgtagtAAACCCTTACAGTGTTTCGAgagtctcgaaaaacctaccc ttaaagGTGGCACATATTGtaggtcggaccatatgagtgccccccccccc ggaatgATGTCTTATTCTCTTATCTGAAAGACATTGCCCGCACATATTTT GTCACCGATTGCCAGATGTAAACACGCGGATATAACCTCCAAAATCATTT ATCATCTTATTCAGAACCCATGTACGGAGAATATGAATCTTTGTGAGCAT GGCAGTATCTGTTCACCCAACCGTTTGACCAAAACTTACGAATGCATCAA TTGTTCTCTGCCATATACTGGTCAACATTGCAATGAGACATTTTCTGGTC CTGGTAatacatgatatgcaccactggagagtattctgaaaaaaattttc catccaatacgtcacttaagcaatagaaaaagtgacgtattgggtggaac aaaaacagttGCATAATTTCCTGAAGTCAtggcagtggtgcatatcatga atacactgttgaatctctctaattcgatccctTCTTATTGCAAAAAACGG AAGACATTGTTTTATGTGAAAACTTAGTCCGTATAAAAACTCTGGTCTGG AGGCTTAATCATATGATCAAAAAGCGAGCaaaacaaattaattttttaag cGCAAGTTCAAGTaggaaacaatgaaaataaacaaaaggcttccagaccg ggttaaaaacaccgagaaaaaaaaaagttaaccaatctctctaatttgat tttgACTACTATTCTTTCAACACTAAACATAGGAGTAATCTTGCCTCGAa gtgaaaaagtaaaataaaaggaACAGGAAGTTAGAATAGTGAACAAATTT CTcgtttttagcgattttgaggTTTTGCAAAAATAGTAGGCCCAGCTTCA GTGTATAAATCACACTTTGAAAAAAGATGGTGTTTTTTCCTCAGTAGGTA TGCTACTTATTTAAGACATTTATACGACGTTATATGAGGCCCCAAGCGGT AACTCTGaacacgatatcacgcaattttttgtcttcaattgCAATCACGc aaattagcaaaaaaaaaatggctaagtctaaaccaggcttcacggctcaa aaaataaatttgcaaaCCACGTAATCACGCGACAAAAAAGTCTctatcac gtcatcacgcaaaccgcttaGGGCCTCTTATATAGATGTATGTTATAAAT GTTAGATAGACGTTTTATGGAGGCTTTAATATCTTTCATCTATTTTATAG GAGAAGCCCCACCACCAGCCCCACCACAAGTTATCCACGAAGGTAAAATA TTCTTGACAGTACTTGTGCGAATTTTCTCTGttacatttttttctgaaat aatttcagttaacaatgccttataaaccttactcgaaatttccttaactc ggacAAATTTTCATTCCTCGTGCAGGTTCAAGttacccagccggcacaca atgtcaaaacaacgtccatgtgacattcataacgtccaaataacgttatt tgaacgttaaaaataacgttgtgtgccagctggttaTGAAGACTCAACTG TATGAATACCAAAAGGCTTCGAgaacaaaaattgataaatttttatttta aattttagtgtattcttttattttttctgatgaaaaatatcttttaatat tCTACTTGGCTCTGGTTTTCATTGAGCACTCTGCaacatcaatcacaaac aaTACACTacactattttaaattttagacATTTTACTTGGCCGGAATAAG TCATGCCGATCGTTATTTCATCACTTTCAAATCGAACATCTGTGGAAAGT ATACTATATTCATCCATGGAATGACcacagaaaaatcaaagtaCTCTGTA AAAGTAAGTATTCCGTAGTTTTGACAAgattaaaacacccctgtctcaaa gccccggtggaactttcttcctcagtggggataaaaactcctattgaaat cccaatggggatagaaattctattgttccaaagttaaaaaatccagtggg gatgggtttggagtgcaatttttgaaaattgaatttcgaatggggatgaa atcaaagtcaatttcccagtggggctgaaatttcagggtattttttccac cggagatgaaatttttgcaaaattttccagtggggcaggggtcccagcgg gtctgtgacacaggggtgtctcaaGGCACCGAAGTGGCTAAACTGAAACT CTTGGAtgagaaatgaagccacttatttcccattcaaaacgcttttctct gcgttgtttttacaataacaccagattgaaataaaagtcCATTGATATAT TTCGTAAATAGTCAGTTCTTTAAATgtctggaaatttgaaaaaattcaag gaaaaaaacATAACCACTTCCTGTTTCAGTGACTTGAAGTTACAATAGTG AACAAATATCTcgttttttacgatttttacgGTTTTGCAAAATAGTAGGT CCAGCTTCAGTGTAAAAATCAAACTTAGAAAAGATGGTGTTTTGATCGGT ATGGacgtattttgattttataggTCAAGATACAAGACTTACAAGTTTAA ACTCTGCAAACCTTCTCCCCATTCGAGAAATCAAAGGCGAGGACCTACAA GATGGCCTTGATATTTCTCAAGTTAGCACTGGCAGTATTAGAGTTCATAC CTCTTTTATGAAAGCTTTggaaagtctgatacagttcgACTATATTCTCC TGCATTGCCGACAGAAAAATAGCTCTTTGGCTTATGATTTGAATTCGGCA CCGTATTTTAAgccttttgattattttttgggACTCACTGATGACCGACC CCCAATATACTCTATGGCTTTCCGTGCTCATTATGGTGACATGGTCCTGG ACCCTATTGACGGCTTTCTTTCTGACGCCAATGTAAGCGTCGATGAAAGA GCCTTTAAGAACATTGTTGTGAATTCAGATGGGAAGAAATTTACAATGTC TGATGAATCAATGCAATGTTTTGGAGACGATGGCGACTGGAAATGGTTTA CAATGGATGTTAGGTGAatgctggcacacaacgttgtttcgacgttcatc taacgttatatggacgttgtggatgttaaataaacgttgaaacaacgtta ggTGAATGCTGACCTCtccaagctg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060804TCONS_00060804Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060804-proteinTCONS_00060804-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:793052..798776 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.06 0.17 0.14 0.1 0.09 0.04 0 0 0.04 2.27 1.73 0.16 0.11 0.45 0.46 4.59 2.59 0.47 0.6 0.17 0.43 0.11 0 0 0.04 0 0.03