TCONS_00015905 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015905
Unique NameTCONS_00015905
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2057

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015905 ID=TCONS_00015905|Name=TCONS_00015905|organism=Clytia hemisphaerica|type=transcript|length=2057bp
agagaaaatatagaaaatattaataaaaatgaattcaaaaataCCGACTg
gatttcaaaatgaaattgctGGTGTTGTTGATAAGAAGTTGTTTGAATGT
CCAATCTGTCTTTGTATANTGGAATTGCTGGTGTTGTTGATAAGAAGTTG
TTTGAATGTCCAATCTGTCTCTGTATAATTCGAAAAGCTAAAGAATTGCC
ATGTGAACATCTAATGTGTTCAGAGTGTTTATTGTACTAcgaaaataagg
aaattgaaaaagtcaaaagCAGAGGATTAGATGAAAAAGATGCAGAATTT
CTATGTTCGATATGTCAAAAACGTTACCACCGCAATAAGAAAGTAGCTGT
GAAGTTCATGGACCGGCTGATTCAAAACGATACTCAATTTAAATGTTTGC
AAACGGAATGCAAATGGATTGGCTCATTAAATGACTACAAGGTGCACAAG
CGAAAATGTTTCGAGGAGGTAGAATGCCAATATTCTTCTTTCGGTTGCCG
GCAAAAACTGAACAAAGGAAAGGTCAAGAATCATAACGAAGAGAATCAAG
ACCATCACGAGATATTACTTTTAAAGACCGTACAAAATTTAGTGGAAGAA
CGCAGAGAAAACCGACAACTCATCCAAAATTTGGAACAACATGCCGTTAA
AACCGACCAAGAACTAAGTATGCTTAAAACCgaaaataaagatttagaaT
CAAAGGTTGAAAATCACTCAGCTCATCTAAAACTTGAACAAATCTTAAAT
ACTATAGAATCTTATCAAGAACTTCAAAAAATGGTCATGAATGACAGCAC
AGAGCTGAAAACAAAGGTTAAGAAACAATCAGACTTACTCACCAAAATGG
AACAAAAATTGTGTGATTCAGATGATAAGCAacaacaaacattgaaaaac
CGAATAACACAATTAGAAAGAGAAAATTCAAACCTAAGGCAGAATATTGA
TCGCCAAAAAGCTCGCATAAATCAGTTGGAAAGCCAAATGAACAATTATg
tgaaaaaatctgaatttgaagaaagtacagaagaatggaaaaataaGCTG
GTGGAAGTCGAGAAAGATGTCATCAACctgaaaatttttgctgaacAAGC
TAGTCAACTCCATACTGGTATATGTAATTGGAACACGATGGATTATTGCA
GTGGTATAATTTATCAGAAAAGATATGAGAAGATACAATCAGTGAAAAGC
TGGAgtgaatttgttgaaaaaatttcggCCAGTGATTATAATGGGAGTTG
TGAATACCTTCAAAATATGGTTAGAGCTATTGCAGATTATAGCAACTACA
CAATTTATCCTGAGACCTATGCAAGTCGACTGGAAGTTCTggcaaactcg
ttagaaaaaggtACACATAGAGAAGATTTTCTGAAGATAAATACTTGTTA
TGATTTCAATGAGATATCTGTTGTTTTCCTATCTGACGAAGAAGATACTA
ACTTCATGAAGAAATTATCATCAGAGGGAGATGATTGGTACAGACAATCT
CCCATTATGGCAACTCGATATGTTGATGAACGTTTTGAAATTGCAGTTGA
GTTAGGATTTGATCGAGAACATATCTATCTACTGCATGACTATGAAGAAA
GTGAGAGCGTCAAAATCCCAGTTAATGGAGAAGCTATTTCGCTTTATGGA
CCCAGTTACCAGATCCTAAATTCTACATGTATAATCTTTGATTTACAAGG
AAGAGAAAAACGCATCGGATTATCTTGAGAATGATTCATTGATTGGAATC
TAACGAGTTCTAGAGTTTTTAATCTGGTTTGATTGGCTTTCATAGCGAGA
GCCTTGGAAGTGGAAATTTTATGAGAAGACTTTCTCAAAGTCAATGCCTT
TGAGACTTAAGGAAAATATATGTATCTTTGTATGAAGGaagtgaaagttt
taaaaagcattgaatCGAAAGATGACGTAACGTATTACAAAACCGAGGAA
GAATATTTGTACGCTACAGTGTGTCTAGAAAAATCAGAACCGATTTAATA
TTAAACTAAGTCTTTTTCCTatcccctgcttattcggactcccccgtcta
ttcggcc
Run BLAST on NCBI

protein sequence of TCONS_00015905-protein

>TCONS_00015905-protein ID=TCONS_00015905-protein|Name=TCONS_00015905-protein|organism=Clytia hemisphaerica|type=polypeptide|length=543bp
MSNLSLYXGIAGVVDKKLFECPICLCIIRKAKELPCEHLMCSECLLYYEN
KEIEKVKSRGLDEKDAEFLCSICQKRYHRNKKVAVKFMDRLIQNDTQFKC
LQTECKWIGSLNDYKVHKRKCFEEVECQYSSFGCRQKLNKGKVKNHNEEN
QDHHEILLLKTVQNLVEERRENRQLIQNLEQHAVKTDQELSMLKTENKDL
ESKVENHSAHLKLEQILNTIESYQELQKMVMNDSTELKTKVKKQSDLLTK
MEQKLCDSDDKQQQTLKNRITQLERENSNLRQNIDRQKARINQLESQMNN
YVKKSEFEESTEEWKNKLVEVEKDVINLKIFAEQASQLHTGICNWNTMDY
CSGIIYQKRYEKIQSVKSWSEFVEKISASDYNGSCEYLQNMVRAIADYSN
YTIYPETYASRLEVLANSLEKGTHREDFLKINTCYDFNEISVVFLSDEED
TNFMKKLSSEGDDWYRQSPIMATRYVDERFEIAVELGFDREHIYLLHDYE
ESESVKIPVNGEAISLYGPSYQILNSTCIIFDLQGREKRIGLS
Run BLAST on NCBI

transcript from alignment at sc0000222:337067..344342+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015905 ID=TCONS_00015905|Name=TCONS_00015905|organism=Clytia hemisphaerica|type=transcript|length=7276bp|location=Sequence derived from alignment at sc0000222:337067..344342+ (Clytia hemisphaerica)
agagaaaatatagaaaatattaataaaaatgaattcaaaaataCCGACTg gatttcaaaatgaaattgctGGTGTTGTTGATAAGAAGTTGTTTGAATGT CCAATCTGTCTTTGTATANTGGAATTGCTGGTGTTGTTGATAAGAAGTTG TTTGAATGTCCAATCTGTCTCTGTATAATTCGAAAAGCTAAAGAATTGCC ATGTGAACATCTAATGTGTTCAGAGTGTTTATTGTACTAcgaaaataagg aaattgaaaaagtcaaaaggtttgttttttaattcggtAAAGGTTACACA GGCACTACATATCAGCTCTattcattacacgtttttttagaacaaactat ataagaacaaaaggcttcgatggccaaaatattaagaacaagctaagaat attttaagtttttttgcgGACTCAAAAACATCTGATTTCCtataaaaatg ggcaaaaatactcacagaatggtgaaaataagaatatttttaggcttaaa atataaagatttaagaatatccaaaggcttcaaaatttttggatgttctt ataaaaaaacgtgtatcgatactagtcttatttttttttcaagcctGGAC GGACGCCAAAACTTTCTTTATTGATCTTACATTAGGGCATATGAGTGATG CAAGTTGAGCTAGTCTAGTTAGTAAGTTCGGcagtgaaattaaaatgaat tctaaatttttctcttctttgatATTTTAGCAGAGGATTAGATGAAAAAG ATGCAGAATTTCTATGTTCGATATGTCAAAAACGTTACCACCGCAATAAG GTATTCATGTCAATTCGTTTTAAGTGTGCACTTATGTTTGCTTTGCTTTT CGTTTTCCAAACAATACTTCAAATCTAACAAATCATAtactgttgaaaag ataattcagagcactAAAATTGTCACagaaaagttattctaaaaaaaatg agaaaatgaagatgaaaaaaatgaagaagaaaaaaatgaaaagaaactcc tttttggacctaccacggaggtcctttaaattaactgatgttcgttcatt cgttcgtctgttaccagcttctCTCGgctcatgattttttgcacagtgat aaaaaagtgacggagcccgattttcgaaaaaacgatgtttggacaaattt gggccaaaaagtgtaaaattgcttcattagttttttctatttttttgcat aaagatagagggcaaggttctctaaaaaatgGCTCAAGcagtttttttgg aaatttttttttggctgtaaaaatcggattttcttatttggggaaattcc cttttgctatatttagggaaaatgagcatttctcgaagttagcttggtat ttttttcttatttttttgttggacttttgggaaaatcaccttTTATcgta gactatgttatagtctaagacgaattactatctaagaaaaaagcccaaag ccgaagagaattcgcaaacgggtttttttgccgaaaagagttaacagtca gtagagttgccagtcttagactatacgattttggcacaaaatacaaaaac agcccAAATCGTACAAATTCGAGTTTCCGTATGCGAGGCCAACTGTGTTC ggtattcgaaaaaatcaaaacaaaaaaaaagggGCGGGAGAGAAACCGAG ATAAAAAAGAGAGTGTAGTTCCAAGAAATATTATAGTTCTCTTTGGAGAC CCTCTCCCTTTTATTCCCTTTATATATTCTTGGAACTACACTCTCTTTTC TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNCAAGAAGTATGTTAAAAGCAGTCTTTTAAA GTCCACAATTGAAATTAAGTActttgtttgacatttttcaaagttgtcaA AGAACTGCTAACACCAGATgaaaatactttaatgggataaattttcgcgg ggattaaatttcgcggttgagctcatccgcgaaattttaagattttgcgg ggattaattttcgagGATGGCACCATTGGGGggcattattttctcgattt tgtgacttttactgtcaaatcatgcatattggttgttgaaatacacatta tttgcgcctctttgatgcaagtaaNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNttttcaaatttccaacgggacttattttcgcggatg acacccaaatccgcgaaatccgcgaaaattaatccccgcgaaaatttatc ccattaaagtaactaTTTAAGAGATGAGGGTATTCACATATCTAATGAAA CACTGCCTGTGATTCATAGGATTCATAAGAAATATACAAACTTACTTACC TACTTAGTTTCTCTGTGTCTTTTTGCTGTATGTAGACttgttgaaaaatc attttaaaacagcTTCTACAGAAGCATACTTGAGGAATAAGTACTCCCTT AAACTAAGTTATCTTGTAGTCTCAATAAAACAAGtgaaccaagaagaaaa aatccataatgagctggattttcacagaaaaaccATAGATCCATCTTGTC CTTGTGTCTCTTCCCCAGTGACCAGCGTGTTTTTGATCGTTTGAACCAAG CTCGGCCTTTAAACTTAGGCGATTTTCACCACGGAGCGACTAACCAGTCt cacggacgataacatcgtctacttTTATCGTCAATAGGGAAATCAcgtta aaatatttattcacccCAGTATCTACGACTATAAGTCGTCGATATTAACT TGTCGTCGATAATAATCTGCTCGCTACACTtttttactctcttgctattt gtcctatttttatctgattctcgtcatcaggtaggtccattcagcatgtt gcttgtttggtacataaataaaaacaagcgaCTCAGTTTTTCGTCTCTTC TGCTTTCTAGAGGTTCTAACCTTTGTTTGATGCAAAAACTTTAAAGGAAA AATAACTAATCTCGGATACCTAATAAACAGAGGAGTTTGGAATACAATAA GTGGGGTAGCTGAAAAAATTctcaagcggggggggggggggggNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNtcagacatagtagaaataaagcaaaaagtaatggtggga acaattttatacaaactaaatcccgtaacaacaatcgtattatcatataa cgcctatactactgtgtTACAtgtattataaacgactccagtcaaagcat aatatttttataatgaaaACAGGTGTAATTATCTTCAAAGCGGATGATAT CCTCTCCGCTAATCTATCTATTACAATTGTCTGCTTTTCTTCATTTGATA GCTTTTCACTTTTTCAGAAAGTAGCTGTGAAGTTCATGGACCGGCTGATT CAAAACGATACTCAATTTAAATGTTTGCAAACGGAATGCAAATGGATTGG CTCATTAAATGACTACAAGGTATTGTAAAGTtatcttaaaggttttgctt tcacaaaagtgttcccgtttcatatcagacacatatttcatatcaggaca gggtctgcctattgttaaagtatgctgatataagcaaaaaatgtttttct tttcctctttctaaccaatcttgcttcacatccgtgtcaatccaaatgcg aaaaaagcttgtaaattaaaagtgatgagtaagcaaacgatatcactctt atttaaaaacaaaacttttaatgcCCAGCTCATTAAATAAAGTTTATTTA AATATCGGAGAAAAAAgggattaaaatttgaaattatttaactTTCAATC AATTTCTCTTTCAGGTGCACAAGCGAAAATGTTTCGAGGAGGTAGAATGC CAATATTCTTCTTTCGGTTGCCGGCAAAAAGTATTTAGTgatgttattta tttttctattacTCCTCTCACTGGTTTACAACTGGTTATTTTTTTCCGTC GCCAAAAAAAATAGAATCATGTTTGAAAattagtaagtaagtctgcaacc gcagtctgaggcgacccgaaggctcctctttagataactatctacccgaa ggtagggggaGGGCatcactctttctccctggattgctccactgaccctt gatccttctcttaattgctgagcattaagcagagaggcatcaagtaccat tttgggaatcttcggtatgacccggctgggggttgaacccacaaccttgg gAACCGAAgtcggatgctctaccactgcactacgatcgcttgaaaattga aattacaacaaagtaGAACACTGAAGTACATGTTTTTATATAAGTATAGG GAAAATTTTGTGAGCTTTATTATGCTTGGCACAATgaattttttgagttt caaaaattcTTATGTACTGGtgcaatttgcaattttttgcaattttagag attttaaaaGATGCTTTGAAATTCAGTATATGCTTTAGGCAACCTTCAAG TGTTATGCTTATTAAAAGATGTGTAGAACAAAACTATCTTTGAGGCGAAA ACTTGTATTCTGTTAATTTTCACTAGCTGAACAAAGGAAAGGTCAAGAAT CATAACGAAGAGAATCAAGACCATCACGAGATATTACTTTTAAAGACCGT ACAAAATTTAGTGGAAGAACGCAGAGAAAACCGACAACTCATCCAAAATT TGGAACAACATGCCGTTAAAACCGACCAAGAACTAAGTATGCTTAAAACC gaaaataaagatttagaaTCAAAGGTTGAAAATCACTCAGCTCATCTAAA ACTTGAACAAATCTTAAATACTATAGAATCTTATCAAGAACTTCAAAAAA TGGTCATGAATGACAGCACAGAGCTGAAAACAAAGGTTAAGAAACAATCA GACTTACTCACCAAAATGGAACAAAAATTGTGTGATTCAGATGATAAGCA acaacaaacattgaaaaacCGAATAACACAATTAGAAAGAGAAAATTCAA ACCTAAGGCAGAATATTGATCGCCAAAAAGCTCGCATAAATCAGTTGGAA AGCCAAATGAACAATTATgtgaaaaaatctgaatttgaagaaagtacaga agaatggaaaaataaGCTGGTGGAAGTCGAGAAAGATGTCATCAACctga aaatttttgctgaacAAGCTAGTCAACTCCATACTGGTATATGTAATTGG AACACGATGGATTATTGCAGTGGTATAATTTATCAGAAAAGATATGAGAA GATACAATCAGTGAAAAGCTGGAgtgaatttgttgaaaaaatttcggCCA GTGATTATAATGGGAGTTGTGAATACCTTCAAAATATGGTTAGAGCTATT GCAGATTATAGCAACTACACAATTTATCCTGAGACCTATGCAAGTCGACT GGAAGTTCTggcaaactcgttagaaaaaggtACACATAGAGAAGATTTTC TGAAGATAAATACTTGTTATGATTTCAATGAGATATCTGTTGTTTTCCTA TCTGACGAAGAAGATACTAACTTCATGAAGAAATTATCATCAGAGGGAGA TGATTGGTACAGACAATCTCCCATTATGGCAACTCGATATGTTGATGAAC GTTTTGAAATTGCAGTTGAGTTAGGATTTGATCGAGAACATATCTATCTA CTGCATGACTATGAAGAAAGTGAGAGCGTCAAAATCCCAGTTAATGGAGA AGCTATTTCGCTTTATGGACCCAGTTACCAGATCCTAAATTCTACATGTA TAATCTTTGATTTACAAGGAAGAGAAAAACGCATCGGATTATCTTGAGAA TGATTCATTGATTGGAATCTAACGAGTTCTAGAGTTTTTAATCTGGTTTG ATTGGCTTTCATAGCGAGAGCCTTGGAAGTGGAAATTTTATGAGAAGACT TTCTCAAAGTCAATGCCTTTGAGACTTAAGGAAAATATATGTATCTTTGT ATGAAGGaagtgaaagttttaaaaagcattgaatCGAAAGATGACGTAAC GTATTACAAAACCGAGGAAGAATATTTGTACGCTACAGTGTGTCTAGAAA AATCAGAACCGATTTAATATTAAACTAAGTCTTTTTCCTatcccctgctt attcggactcccccgtctattcggcc

Coding sequence (CDS) from alignment at sc0000222:337067..344342+

>TCONS_00015905 ID=TCONS_00015905|Name=TCONS_00015905|organism=Clytia hemisphaerica|type=CDS|length=8160bp|location=Sequence derived from alignment at sc0000222:337067..344342+ (Clytia hemisphaerica)
ATGTCCAATCTGTCTTTGTATANTGGAATTGCTGGTGTTGTTGATAAGAA
GTTGTTTGAATGTCCAATCTGTCTCTGTATAATTCGAAAAGCTAAAGAAT
TGCCATGTGAACATCTAATGTGTTCAGAGTGTTTATTGTACTAcgaaaat
aaggaaattgaaaaagtcaaaagCAGAGGATTAGATGAAAAAGATGCAGA
ATTTCTATGTTCGATATGTCAAAAACGTTACCACCGCAATAAGAAAGTAG
CTGTGAAGTTCATGGACCGGCTGATTCAAAACGATACTCAATTTAAATGT
TTGCAAACGGAATGCAAATGGATTGGCTCATTAAATGACTACAAGGTGCA
CAAGCGAAAATGTTTCGAGGAGGTAGAATGCCAATATTCTTCTTTCGGTT
GCCGGCAAAAACTGAACAAAGGAAAGGTCAAGAATCATAACGAAGAGAAT
CAAGACCATCACGAGATATTACTTTTAAAGACCGTACAAAATTTAGTGGA
AGAACGCAGAGAAAACCGACAACTCATCCAAAATTTGGAACAACATGCCG
TTAAAACCGACCAAGAACTAAGTATGCTTAAAACCgaaaataaagattta
gaaTCAAAGGTTGAAAATCACTCAGCTCATCTAAAACTTGAACAAATCTT
AAATACTATAGAATCTTATCAAGAACTTCAAAAAATGGTCATGAATGACA
GCACAGAGCTGAAAACAAAGGTTAAGAAACAATCAGACTTACTCACCAAA
ATGGAACAAAAATTGTGTGATTCAGATGATAAGCAacaacaaacattgaa
aaacCGAATAACACAATTAGAAAGAGAAAATTCAAACCTAAGGCAGAATA
TTGATCGCCAAAAAGCTCGCATAAATCAGTTGGAAAGCCAAATGAACAAT
TATgtgaaaaaatctgaatttgaagaaagtacagaagaatggaaaaataa
GCTGGTGGAAGTCGAGAAAGATGTCATCAACctgaaaatttttgctgaac
AAGCTAGTCAACTCCATACTGGTATATGTAATTGGAACACGATGGATTAT
TGCAGTGGTATAATTTATCAGAAAAGATATGAGAAGATACAATCAGTGAA
AAGCTGGAgtgaatttgttgaaaaaatttcggCCAGTGATTATAATGGGA
GTTGTGAATACCTTCAAAATATGGTTAGAGCTATTGCAGATTATAGCAAC
TACACAATTTATCCTGAGACCTATGCAAGTCGACTGGAAGTTCTggcaaa
ctcgttagaaaaaggtACACATAGAGAAGATTTTCTGAAGATAAATACTT
GTTATGATTTCAATGAGATATCTGTTGTTTTCCTATCTGACGAAGAAGAT
ACTAACTTCATGAAGAAATTATCATCAGAGGGAGATGATTGGTACAGACA
ATCTCCCATTATGGCAACTCGATATGTTGATGAACGTTTTGAAATTGCAG
TTGAGTTAGGATTTGATCGAGAACATATCTATCTACTGCATGACTATGAA
GAAAGTGAGAGCGTCAAAATCCCAGTTAATGGAGAAGCTATTTCGCTTTA
TGGACCCAGTTACCAGATCCTAAATTCTACATGTATAATCTTTGATTTAC
AAGGAAGAGAAAAACGCATCGGATTATCTTGAATGTCCAATCTGTCTTTG
TATANTGGAATTGCTGGTGTTGTTGATAAGAAGTTGTTTGAATGTCCAAT
CTGTCTCTGTATAATTCGAAAAGCTAAAGAATTGCCATGTGAACATCTAA
TGTGTTCAGAGTGTTTATTGTACTAcgaaaataaggaaattgaaaaagtc
aaaagCAGAGGATTAGATGAAAAAGATGCAGAATTTCTATGTTCGATATG
TCAAAAACGTTACCACCGCAATAAGAAAGTAGCTGTGAAGTTCATGGACC
GGCTGATTCAAAACGATACTCAATTTAAATGTTTGCAAACGGAATGCAAA
TGGATTGGCTCATTAAATGACTACAAGGTGCACAAGCGAAAATGTTTCGA
GGAGGTAGAATGCCAATATTCTTCTTTCGGTTGCCGGCAAAAACTGAACA
AAGGAAAGGTCAAGAATCATAACGAAGAGAATCAAGACCATCACGAGATA
TTACTTTTAAAGACCGTACAAAATTTAGTGGAAGAACGCAGAGAAAACCG
ACAACTCATCCAAAATTTGGAACAACATGCCGTTAAAACCGACCAAGAAC
TAAGTATGCTTAAAACCgaaaataaagatttagaaTCAAAGGTTGAAAAT
CACTCAGCTCATCTAAAACTTGAACAAATCTTAAATACTATAGAATCTTA
TCAAGAACTTCAAAAAATGGTCATGAATGACAGCACAGAGCTGAAAACAA
AGGTTAAGAAACAATCAGACTTACTCACCAAAATGGAACAAAAATTGTGT
GATTCAGATGATAAGCAacaacaaacattgaaaaacCGAATAACACAATT
AGAAAGAGAAAATTCAAACCTAAGGCAGAATATTGATCGCCAAAAAGCTC
GCATAAATCAGTTGGAAAGCCAAATGAACAATTATgtgaaaaaatctgaa
tttgaagaaagtacagaagaatggaaaaataaGCTGGTGGAAGTCGAGAA
AGATGTCATCAACctgaaaatttttgctgaacAAGCTAGTCAACTCCATA
CTGGTATATGTAATTGGAACACGATGGATTATTGCAGTGGTATAATTTAT
CAGAAAAGATATGAGAAGATACAATCAGTGAAAAGCTGGAgtgaatttgt
tgaaaaaatttcggCCAGTGATTATAATGGGAGTTGTGAATACCTTCAAA
ATATGGTTAGAGCTATTGCAGATTATAGCAACTACACAATTTATCCTGAG
ACCTATGCAAGTCGACTGGAAGTTCTggcaaactcgttagaaaaaggtAC
ACATAGAGAAGATTTTCTGAAGATAAATACTTGTTATGATTTCAATGAGA
TATCTGTTGTTTTCCTATCTGACGAAGAAGATACTAACTTCATGAAGAAA
TTATCATCAGAGGGAGATGATTGGTACAGACAATCTCCCATTATGGCAAC
TCGATATGTTGATGAACGTTTTGAAATTGCAGTTGAGTTAGGATTTGATC
GAGAACATATCTATCTACTGCATGACTATGAAGAAAGTGAGAGCGTCAAA
ATCCCAGTTAATGGAGAAGCTATTTCGCTTTATGGACCCAGTTACCAGAT
CCTAAATTCTACATGTATAATCTTTGATTTACAAGGAAGAGAAAAACGCA
TCGGATTATCTTGAATGTCCAATCTGTCTTTGTATANTGGAATTGCTGGT
GTTGTTGATAAGAAGTTGTTTGAATGTCCAATCTGTCTCTGTATAATTCG
AAAAGCTAAAGAATTGCCATGTGAACATCTAATGTGTTCAGAGTGTTTAT
TGTACTAcgaaaataaggaaattgaaaaagtcaaaagCAGAGGATTAGAT
GAAAAAGATGCAGAATTTCTATGTTCGATATGTCAAAAACGTTACCACCG
CAATAAGAAAGTAGCTGTGAAGTTCATGGACCGGCTGATTCAAAACGATA
CTCAATTTAAATGTTTGCAAACGGAATGCAAATGGATTGGCTCATTAAAT
GACTACAAGGTGCACAAGCGAAAATGTTTCGAGGAGGTAGAATGCCAATA
TTCTTCTTTCGGTTGCCGGCAAAAACTGAACAAAGGAAAGGTCAAGAATC
ATAACGAAGAGAATCAAGACCATCACGAGATATTACTTTTAAAGACCGTA
CAAAATTTAGTGGAAGAACGCAGAGAAAACCGACAACTCATCCAAAATTT
GGAACAACATGCCGTTAAAACCGACCAAGAACTAAGTATGCTTAAAACCg
aaaataaagatttagaaTCAAAGGTTGAAAATCACTCAGCTCATCTAAAA
CTTGAACAAATCTTAAATACTATAGAATCTTATCAAGAACTTCAAAAAAT
GGTCATGAATGACAGCACAGAGCTGAAAACAAAGGTTAAGAAACAATCAG
ACTTACTCACCAAAATGGAACAAAAATTGTGTGATTCAGATGATAAGCAa
caacaaacattgaaaaacCGAATAACACAATTAGAAAGAGAAAATTCAAA
CCTAAGGCAGAATATTGATCGCCAAAAAGCTCGCATAAATCAGTTGGAAA
GCCAAATGAACAATTATgtgaaaaaatctgaatttgaagaaagtacagaa
gaatggaaaaataaGCTGGTGGAAGTCGAGAAAGATGTCATCAACctgaa
aatttttgctgaacAAGCTAGTCAACTCCATACTGGTATATGTAATTGGA
ACACGATGGATTATTGCAGTGGTATAATTTATCAGAAAAGATATGAGAAG
ATACAATCAGTGAAAAGCTGGAgtgaatttgttgaaaaaatttcggCCAG
TGATTATAATGGGAGTTGTGAATACCTTCAAAATATGGTTAGAGCTATTG
CAGATTATAGCAACTACACAATTTATCCTGAGACCTATGCAAGTCGACTG
GAAGTTCTggcaaactcgttagaaaaaggtACACATAGAGAAGATTTTCT
GAAGATAAATACTTGTTATGATTTCAATGAGATATCTGTTGTTTTCCTAT
CTGACGAAGAAGATACTAACTTCATGAAGAAATTATCATCAGAGGGAGAT
GATTGGTACAGACAATCTCCCATTATGGCAACTCGATATGTTGATGAACG
TTTTGAAATTGCAGTTGAGTTAGGATTTGATCGAGAACATATCTATCTAC
TGCATGACTATGAAGAAAGTGAGAGCGTCAAAATCCCAGTTAATGGAGAA
GCTATTTCGCTTTATGGACCCAGTTACCAGATCCTAAATTCTACATGTAT
AATCTTTGATTTACAAGGAAGAGAAAAACGCATCGGATTATCTTGAATGT
CCAATCTGTCTTTGTATANTGGAATTGCTGGTGTTGTTGATAAGAAGTTG
TTTGAATGTCCAATCTGTCTCTGTATAATTCGAAAAGCTAAAGAATTGCC
ATGTGAACATCTAATGTGTTCAGAGTGTTTATTGTACTAcgaaaataagg
aaattgaaaaagtcaaaagCAGAGGATTAGATGAAAAAGATGCAGAATTT
CTATGTTCGATATGTCAAAAACGTTACCACCGCAATAAGAAAGTAGCTGT
GAAGTTCATGGACCGGCTGATTCAAAACGATACTCAATTTAAATGTTTGC
AAACGGAATGCAAATGGATTGGCTCATTAAATGACTACAAGGTGCACAAG
CGAAAATGTTTCGAGGAGGTAGAATGCCAATATTCTTCTTTCGGTTGCCG
GCAAAAACTGAACAAAGGAAAGGTCAAGAATCATAACGAAGAGAATCAAG
ACCATCACGAGATATTACTTTTAAAGACCGTACAAAATTTAGTGGAAGAA
CGCAGAGAAAACCGACAACTCATCCAAAATTTGGAACAACATGCCGTTAA
AACCGACCAAGAACTAAGTATGCTTAAAACCgaaaataaagatttagaaT
CAAAGGTTGAAAATCACTCAGCTCATCTAAAACTTGAACAAATCTTAAAT
ACTATAGAATCTTATCAAGAACTTCAAAAAATGGTCATGAATGACAGCAC
AGAGCTGAAAACAAAGGTTAAGAAACAATCAGACTTACTCACCAAAATGG
AACAAAAATTGTGTGATTCAGATGATAAGCAacaacaaacattgaaaaac
CGAATAACACAATTAGAAAGAGAAAATTCAAACCTAAGGCAGAATATTGA
TCGCCAAAAAGCTCGCATAAATCAGTTGGAAAGCCAAATGAACAATTATg
tgaaaaaatctgaatttgaagaaagtacagaagaatggaaaaataaGCTG
GTGGAAGTCGAGAAAGATGTCATCAACctgaaaatttttgctgaacAAGC
TAGTCAACTCCATACTGGTATATGTAATTGGAACACGATGGATTATTGCA
GTGGTATAATTTATCAGAAAAGATATGAGAAGATACAATCAGTGAAAAGC
TGGAgtgaatttgttgaaaaaatttcggCCAGTGATTATAATGGGAGTTG
TGAATACCTTCAAAATATGGTTAGAGCTATTGCAGATTATAGCAACTACA
CAATTTATCCTGAGACCTATGCAAGTCGACTGGAAGTTCTggcaaactcg
ttagaaaaaggtACACATAGAGAAGATTTTCTGAAGATAAATACTTGTTA
TGATTTCAATGAGATATCTGTTGTTTTCCTATCTGACGAAGAAGATACTA
ACTTCATGAAGAAATTATCATCAGAGGGAGATGATTGGTACAGACAATCT
CCCATTATGGCAACTCGATATGTTGATGAACGTTTTGAAATTGCAGTTGA
GTTAGGATTTGATCGAGAACATATCTATCTACTGCATGACTATGAAGAAA
GTGAGAGCGTCAAAATCCCAGTTAATGGAGAAGCTATTTCGCTTTATGGA
CCCAGTTACCAGATCCTAAATTCTACATGTATAATCTTTGATTTACAAGG
AAGAGAAAAACGCATCGGATTATCTTGAATGTCCAATCTGTCTTTGTATA
NTGGAATTGCTGGTGTTGTTGATAAGAAGTTGTTTGAATGTCCAATCTGT
CTCTGTATAATTCGAAAAGCTAAAGAATTGCCATGTGAACATCTAATGTG
TTCAGAGTGTTTATTGTACTAcgaaaataaggaaattgaaaaagtcaaaa
gCAGAGGATTAGATGAAAAAGATGCAGAATTTCTATGTTCGATATGTCAA
AAACGTTACCACCGCAATAAGAAAGTAGCTGTGAAGTTCATGGACCGGCT
GATTCAAAACGATACTCAATTTAAATGTTTGCAAACGGAATGCAAATGGA
TTGGCTCATTAAATGACTACAAGGTGCACAAGCGAAAATGTTTCGAGGAG
GTAGAATGCCAATATTCTTCTTTCGGTTGCCGGCAAAAACTGAACAAAGG
AAAGGTCAAGAATCATAACGAAGAGAATCAAGACCATCACGAGATATTAC
TTTTAAAGACCGTACAAAATTTAGTGGAAGAACGCAGAGAAAACCGACAA
CTCATCCAAAATTTGGAACAACATGCCGTTAAAACCGACCAAGAACTAAG
TATGCTTAAAACCgaaaataaagatttagaaTCAAAGGTTGAAAATCACT
CAGCTCATCTAAAACTTGAACAAATCTTAAATACTATAGAATCTTATCAA
GAACTTCAAAAAATGGTCATGAATGACAGCACAGAGCTGAAAACAAAGGT
TAAGAAACAATCAGACTTACTCACCAAAATGGAACAAAAATTGTGTGATT
CAGATGATAAGCAacaacaaacattgaaaaacCGAATAACACAATTAGAA
AGAGAAAATTCAAACCTAAGGCAGAATATTGATCGCCAAAAAGCTCGCAT
AAATCAGTTGGAAAGCCAAATGAACAATTATgtgaaaaaatctgaatttg
aagaaagtacagaagaatggaaaaataaGCTGGTGGAAGTCGAGAAAGAT
GTCATCAACctgaaaatttttgctgaacAAGCTAGTCAACTCCATACTGG
TATATGTAATTGGAACACGATGGATTATTGCAGTGGTATAATTTATCAGA
AAAGATATGAGAAGATACAATCAGTGAAAAGCTGGAgtgaatttgttgaa
aaaatttcggCCAGTGATTATAATGGGAGTTGTGAATACCTTCAAAATAT
GGTTAGAGCTATTGCAGATTATAGCAACTACACAATTTATCCTGAGACCT
ATGCAAGTCGACTGGAAGTTCTggcaaactcgttagaaaaaggtACACAT
AGAGAAGATTTTCTGAAGATAAATACTTGTTATGATTTCAATGAGATATC
TGTTGTTTTCCTATCTGACGAAGAAGATACTAACTTCATGAAGAAATTAT
CATCAGAGGGAGATGATTGGTACAGACAATCTCCCATTATGGCAACTCGA
TATGTTGATGAACGTTTTGAAATTGCAGTTGAGTTAGGATTTGATCGAGA
ACATATCTATCTACTGCATGACTATGAAGAAAGTGAGAGCGTCAAAATCC
CAGTTAATGGAGAAGCTATTTCGCTTTATGGACCCAGTTACCAGATCCTA
AATTCTACATGTATAATCTTTGATTTACAAGGAAGAGAAAAACGCATCGG
ATTATCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008886XLOC_008886Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015905-exon-sc0000222-1491911889:337067..337335TCONS_00015905-exon-sc0000222-1491911889:337067..337335Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1510915933:337067..337335TCONS_00015905-exon-sc0000222-1510915933:337067..337335Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1575043694:337067..337335TCONS_00015905-exon-sc0000222-1575043694:337067..337335Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1491911889:337797..337866TCONS_00015905-exon-sc0000222-1491911889:337797..337866Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1510915933:337797..337866TCONS_00015905-exon-sc0000222-1510915933:337797..337866Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1575043694:337797..337866TCONS_00015905-exon-sc0000222-1575043694:337797..337866Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1491911889:341634..341735TCONS_00015905-exon-sc0000222-1491911889:341634..341735Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1510915933:341634..341735TCONS_00015905-exon-sc0000222-1510915933:341634..341735Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1575043694:341634..341735TCONS_00015905-exon-sc0000222-1575043694:341634..341735Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1491911889:342081..342146TCONS_00015905-exon-sc0000222-1491911889:342081..342146Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1510915933:342081..342146TCONS_00015905-exon-sc0000222-1510915933:342081..342146Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1575043694:342081..342146TCONS_00015905-exon-sc0000222-1575043694:342081..342146Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1491911889:342793..344342TCONS_00015905-exon-sc0000222-1491911889:342793..344342Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1510915933:342793..344342TCONS_00015905-exon-sc0000222-1510915933:342793..344342Clytia hemisphaericaexon
TCONS_00015905-exon-sc0000222-1575043694:342793..344342TCONS_00015905-exon-sc0000222-1575043694:342793..344342Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015905-proteinTCONS_00015905-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000222supercontigsc0000222:337067..344342 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.403156 0 0.228237 0 0.876528 1.08214 1.62901 1.45574 0.752598 0.467583 0.855536 0.939749 0.0978532 0.539114 0.000228327 0.368502 0.438622 0.00883338 0 0.387074 0.278738 1.6025 0.796939 0.787988 0.529271 0.548817 0 0.224751 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015905 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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