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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018730 ID=TCONS_00018730|Name=TCONS_00018730|organism=Clytia hemisphaerica|type=transcript|length=236bp
CTGCAGCAAGCAAAAGATCAAGACAAACAAAGATACTTAGAAGGACTTCA
TAATAAGtgaaaagagAGGAAATTCTTCAACAACTCTTAAGCAATGTTTA
AATCGACAACGCTCCTCCTATTGGCCGTTGTCATGGCTACAGGTGCATTG
AGTAGATACCAACACCGTGACCGAGAAATGATGATGGTGGAAGATTTAGA
AAGGGAAGCATATTTGGAAAATAAGTATCGACATTT Run BLAST on NCBI transcript from alignment at sc0000305:18209..20231- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018730 ID=TCONS_00018730|Name=TCONS_00018730|organism=Clytia hemisphaerica|type=transcript|length=2023bp|location=Sequence derived from alignment at sc0000305:18209..20231- (Clytia hemisphaerica)
CTGCAGCAAGCAAAAGATCAAGACAAACAAAGATACTTAGAAGGACTTCA
TAATAAGGTAATTTTCTTATTTCATCTTTAGAAAATGTTTCGATACTATT
TAGAAGACTGATTTTTAATCAACACTTCTTCATAAGTATTCGGAAAAGTG
TTCACTTCACAATCTTAGAACACCCCTGTGTCACAGACCCGTTGGAACTC
CATCCCCAATGGAACAATTGCCCAAAACTTTGTAATCGGTGGAAAAAATA
CCCTGAATTTCAGCCTTACTGGCGGGAAATTGACTCTGATTTTATCGGTT
TTATCCCCACTTGAAATTTAATAGAAGAAACGCACTCCAAAATCATTCCC
GCTAAAATATTCGAGCTTAGATACAATAGAATTTCAATTCTCATTGGGAT
TTTAAATAAAAACTTTTATCCCCACTGAGGACAGAACTTCCACCGAGGCT
GTGAGACAGGGGTGTCTTAGAGGTTAAGGTGTAACGGAGGATAAATGATG
GAATATCAATAATCAAATAATCTATGTTTGCAAGTTGATGCGTATGTCCG
AGCGAAAGCTCACAAATCGACCCTTTGAGGGACTGCACTCTGCGACGTTT
TTGCGAATCTTTGAGAGAGAATTTATAGCTCATATGAGCTATAAATTATC
TCTCAAAGGTTCGCAAACACGGTAAACCCGGTACAAAATCACCGGAGATT
TTTTGACCATTTAAGGGAGTCTATTTTTCATATTTCATAATTTAGGAGCT
CTTTCACAGAATCGTTTTTTCGATCCCTTTGAGAGACTTTCGAGGATTTA
GAAAAAGGACATTCATGGCTTACACATTCCCGACACCCTATTTGCCCAAA
TAATCCGACCCCCCCCCCACCGGAACCAAGGAACTTGAAACAACTATTGG
AATTAGCTTTGACTTCGCTATCTTATCCCAAAGAACACAACGTTGTTTCA
ACGCTCATCTAACGTTATATGGACGTTGTGAACGTTAGATAAACGTTGTG
TGCCAGCTATCTAATCCCGAAAAACATTTTGATTACACTTTGGTATTTTT
AATTCGATTTTCCGGGGCAAAAACTATTTCAAAAGATATAATCAAATTAC
AGAGAGTATTCTATTGACGGTCCAGATCATAGAAAAATTCGAATTACAGA
GGTTAGGTTTCTTTCAAAATTTTAATGATATCTATTGTTTATTTTAGTGA
AAAGAGAGGAAATTCTTCAACAACTCTTAAGCAATGTTTAAATCGACAAC
GCTCCTCCTATTGGCCGTTGTCATGGCTACAGGTGAGGAAACTTCTTGAC
TTCATCAAATTCTCAAGTAGAACCAATAGACCTTTCCATAAATTACGTTA
CCAATATCACTTGCTTCGTTTTGAAATTAATGCCATGATGATTAACTCCC
AGCGTATGTTATTAAACTACTTCCTATTCATAAAAGAATCATTTAATCAT
TGAATGTCTCAAGGGACATAATCACCATGGTAATTGTTTGAATACGAGGC
AAGTGATGTTCGTGACGTAATTTATGAAAAGGTCTATTAGACATTACATC
AGCTCATCAACAGAACGGTTAAGCTCAAGCCCTTATTAATATCAAAAAGA
ATTATGCCTTCAAAGTAATTCGATTCGAGCTAAAAATGTAACCAACCATG
AAACCTTTTCTTCACTTTCAACAGGTCAAATAAAATCCCCAAGCAATTAT
TTAAGTATAGAACCTTAACTAGCCGGACCCGTAACGTCCTTTAGGTATTT
GCAGGTCATTTTCCAAGATAAATCTACTAGTATCGCAATAGTTTGAAATT
TTGGTATTAAATTTTCTAAATTGAGATAAAAGTTAAATGTTAAAAAAAGT
TAAATTGGATCATGAAACCATTTTGGTTTTTCAAGTTTATCAGCTCGCCT
TTTAAATATTTAATGTGAATTCTTTTCAGGTGCATTGAGTAGATACCAAC
ACCGTGACCGAGAAATGATGATGGTGGAAGATTTAGAAAGGGAAGCATAT
TTGGAAAATAAGTATCGACATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018730-exon-sc0000305-1575043694:20175..20231 | TCONS_00018730-exon-sc0000305-1575043694:20175..20231 | Clytia hemisphaerica | exon |
| TCONS_00018730-exon-sc0000305-1575043694:18950..19034 | TCONS_00018730-exon-sc0000305-1575043694:18950..19034 | Clytia hemisphaerica | exon |
| TCONS_00018730-exon-sc0000305-1575043694:18209..18302 | TCONS_00018730-exon-sc0000305-1575043694:18209..18302 | Clytia hemisphaerica | exon |
| TCONS_00018730-exon-sc0000305-1510915933:20175..20231 | TCONS_00018730-exon-sc0000305-1510915933:20175..20231 | Clytia hemisphaerica | exon |
| TCONS_00018730-exon-sc0000305-1510915933:18950..19034 | TCONS_00018730-exon-sc0000305-1510915933:18950..19034 | Clytia hemisphaerica | exon |
| TCONS_00018730-exon-sc0000305-1510915933:18209..18302 | TCONS_00018730-exon-sc0000305-1510915933:18209..18302 | Clytia hemisphaerica | exon |
| TCONS_00018730-exon-sc0000305-1491911889:20175..20231 | TCONS_00018730-exon-sc0000305-1491911889:20175..20231 | Clytia hemisphaerica | exon |
| TCONS_00018730-exon-sc0000305-1491911889:18950..19034 | TCONS_00018730-exon-sc0000305-1491911889:18950..19034 | Clytia hemisphaerica | exon |
| TCONS_00018730-exon-sc0000305-1491911889:18209..18302 | TCONS_00018730-exon-sc0000305-1491911889:18209..18302 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000305 | supercontig | sc0000305:18209..20231 - |
Blast
The following BLAST results are available for this feature:
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