XLOC_044293 (gene) - C. hemisphaerica

Overview
NameXLOC_044293
Unique NameXLOC_044293
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:858078..865127+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044293 ID=XLOC_044293|Name=XLOC_044293|organism=Clytia hemisphaerica|type=gene|length=7050bp|location=Sequence derived from alignment at scaffold_60:858078..865127+ (Clytia hemisphaerica)
AATCATTTTAAAGATCATCTCCTCCTTGTCATAAGCAAGAGAAGAGAGCT TTCGTGCATTTAGGAAAAAACCTTTTCGCAActtctttcaatttctttga aGAAATGGCTCAATCAATTCCATCAAAGTAAGtatgaaatgtgaaaaaat gatgaagaaaagcgggtttttgaaaatctttcaaattgatTTACTTATAG GATTTAGAATCTTTATTTATTGTAGCTGTTTTGATTAAAAACTTCAGTTc tattttttccatctttttCAGTCCTGCTGGAGACAAATACGACCACCAAT GGGAAGCTTTAGCTGGATGGTTTCTCGGGCCACGTGCAGAAAACCGaaac attttcaatgatttGATGTTGAAAGCTTTGAATTGGCATGAAGATCGACG TGAGGAATTCTTTCCAGCCGATCCTTCTTATTTCACGGAGGAGATCAAAA ATTCCGACGCTGCTCAACATGAGTATAAAGATATGGAAAAGCAAATGAAA GAAATGCATCGAGAATTGAACAAATCCATTCCTTTCTTTAGCACCAGATA CCAggtacaaaatcataaaatcattcAAGGGTATCTAATTCTTTTCCTTG TTCTACTGGAATACCTAGGCTCtggtgtctttttttaattcttccTTAAT TCAATGAATAGTTTGAGATGCTAGTTTGGGAAAAGACTTCTTGATCAAAA GGGGAGTGTGTGAGTTTAACTTGTTAAATTGCCAATGTTTAGGGTCACAT GACATGGGACGTGACAATGCCGTCGTTCTTGGGATACGTTTCCGGATTGC TTTGGAATCAAAACAACGTCGATTCAACTGCTTCACCAGTCACAACCAAG TTTGAAGTGGAAGTTGGTCAACAACTTTGCAAATTGATGCGATTTGACGA CACCAAAGTCACACCATGGGGTCATTTGACAGGATGTGGATCAGTCGCTA ATATTGAATCAATGTGGGCTGCAAGGAACACCAAATTACATCCATTGGCT TTGAAAGACTCTTGTGCTGACCCTGATTTCCCCGAATTAATCGGTATGGA CATTTGACATAAGCGCTTTTCTAATTCCACANGATCAGTCGCTAATATAG AATCGATGTGGGCTGCAAGAAACACCAAATTACATCCATTGGCTTTGAAA GACTCTTGTGCTGACCCTGATTTCCCCGAATTAATCGGTACGGACATTTG ACATAAGCGCTTTTCTAATTCCACAAATGATGAGACTAAAATAGCTAATT TGGGACAAGATTTTTTGCATAGGATATTTCGAATCTTTGGAACGGTAGAT TTCACagcttttttgcttaaaaacgattaaatagtgctttttaagagttt taagctattttagtgaaaattcgtcgcggtccttccccttcgctggactt caatgggtcttatcctTTGCAAgagtgtgtcccacgaggtctaggaccat tgggaaccagctcggccccgtgtagagctcagaataagcttaactaagcc ttcaatacagcgctgtaagcttacagcgtaagtccctGGGTgactctgaa ggcctaaaaaccagttttcagtAGTTCATCACCGGTACGTTTCGTATTGC TATGTGTCTATAAAGAGTTCTCAATTCTAAAGTTGATAATGCTAGATTTT AAGCATTCTCCAATTTAAGATAATAAAATCCAATCTTTATTTTCCAGACG GTTTGGAGTGCAAGGTATTTGTCCCTGgtcaacaaaaagaaaagactttg aaagaatGCACCGAATGGGAATTACTGAATTTGAGAATCGATGATATTTG TTCTTTGACTGATGACGTTATCAAGTGTATCGAGGAGAGAAATCCGGatt tcaaaattgacgtcaaagcaACGGTCGACAAAGCTTTGGAGGTAAAAATT TGTACTTTAAATTTCAACTATTGATTTGATTCCCACTACTTTTAAAAGTA GACCCAAATTAAGTTCTGAGACAGGTTTACTCTTTCTTTGTTCTCGAAGC TTTGTTATTCAACTACCATAATCCCATTTTCGGCCTTGACCACCAATGAA GAATTTGGTAAATCAACCTTCACTTTTTCATTCAGAGAAATTCACCAGTG CAACTTGGCTTACCAGAATTTTACCGACGACATAAGATAGGTGAACCAAG CGCAAAAGATGCATCAGTGAGAACATATCCAAGAGTCTTTTCACCAGGAA CAAATCATTATTCATGGCCGAAAGCATCCACCATTCTTGGCATCGGTGAT TCTAATAACATTCACATTCAAGTTGACAGCAAAGCTCGTCAAGATATTGA GAGTAAGTTCAATTATCTTTCTGTAAAACAAGGCTTCTTTTTCGCAGTCg gtaaaaataattaaaatgacCTGGTGACCTGGTGACTAATTAAATCAGCT CAGTCTGTAAGGCATTGATACTCTAACGCAGTTAACATATCACGAAAAGT CTCTCGGAAAAATCTCCCTAAGTTTTACCTGACACGATTGTTCAAGAATC ATATGCAGTTAACATATCACGAAAAGTCTCTCGGAAGAATCTCCCTAAGT TTTACCTGACACGATTCTTCAAAGTTTATCTTCTCACCAACAGCTCTGGA GAAAGAATTGGATTATGCATTGGAACACCAGATTGCAGTGTTCATGGTAG TGGCAGTGATTGGTTCAACAGAAGAAAGTGCTGTGGATGATATCGCAAGA ATCTTGACTCTCAAACCAAAATATGAAGCGAAGGTATAATCTGGTAttta atcccgggggggggcactcgatctgaaaacgaccatacgttcggcccaaa atttggcttccaaaatcggacccttacagtgcactttttaaaaatttctc gcaaaatttttgcaattttccaagaaaatgtggtatttttcctccaaaat tgaccaattttaccaaaaaattggccttttatcacaatttcctaccctta cagtgcactagctgaactataaaaaacctacccttaagggccaaacgtct ggtaggtcatttaccttgagtgccccccccggtatttaatttcttttata gAGACAGTGAAAAACATTTAGTTTTCCGGTTTCGGTGTAATGCAACGAAC TTACAGTTATCCTTCACTCTAAGTATTTTTATGTCGTTTTTCGTATAAGC AATATTTTGGctcaaatccttttttttttaatgcagAAAATCATATTCCT TGATTACTTTGATGTCCAAGTTGGCATTTGACTCGTTTTTCTAATTCATC CTTTTTTGATAGAGAATAACCTGACTTCTCTCCAGGGTTTGACATTTTCG GTGCACGCAGATGCAGCATGGGGTGGATATTTGAATTGTATGACCCACGA AACTGGTGACAAAGAAAGTAACGTTTATTCCAATTGTCTTCCAACAAAAG CTCATGATTTCGTTCCTGCTATTCCACTTTCCGATTTCGTCAAGAAACAA TATGTCAGTTTGCAGTACGCTGATACAGGTGAGAAACGCTATTGATCGAA TTTCATAATGTAAATGGTTTAACTCTTAAAAAACACTTTACTCAATCTGA CTGCAGTGCTCTAAtactattcttgatatgcgcaAGTCACTTTTCTAACG GAATCATCTGAAAATGTTGGGATTCATCCTGGTCGtatactaaaaataga aacactgtGCTCAAAATTCGACTTTATGGGGTTATTCCGttagaaatttt aaagtcaTCTTGACTAACGTAATTAAGAATTGACGAAATTTGTGCTTTAC AGGAAAAACGTGTGGAGTTTTGATtccttgattttaaaaattacctCTTT AATCTCAGTGACCATCGATCCACACAAGTCTGGATTTTGTCCTTACCCTG CCGGTGCTCTTCTCTATCGAAACGGAACAATGAAAGGTTTCATCACACTT GCTGCACCAGAAGTTTTCCACAGTCCTGATGATTTGAACGTTGGAATTTA TGGTTTAGAAGGATCGAAACCTGGAGCTGCAGCTTGTGGTGTTCTCTTGT CTCATCGGGTAAGGTCGAAAATTGGTCACACCAGCAAGGGTCAGACTTAA TTCAGCTACTCAAGACTATTAATTTTCTACTATTGGACTATTTTAAAGTT AACTGTGATTATCGAAATTTAGCATTTAAAGGTTAAAATGGGTACTTTTC CGACGTATTACTATTTTGAAGATCTTGAGAGATAATGGAAATACATTCTA TTCTCGTTCACTAGGTAATTGGATTAGATCAAAACGGTTACGGTCGAATT CTTGGTCAATGTCAACTTGGTGCCAAACTGTTCTACTGCATGTGGGAAAC AGTCGCCAGAGATGACGATCCTTTCATCTGTTGTAACTTCATTCCACTGG ATTTGAAAGAATTACAAGAAAAAGGATTCGCATTCAAAACGCAACAAGAT GTCCATGACTACATCAAGAAACATATCATCGATAAACCTAATGAACAACT TGTCAAGAATGTCCACAAAGAAATTGATTTCTTGGGAATCGTTGGTCCTG ACGCCTTGATCAATTCGTTCACCGTCAACTGTAAGGATCAAAGCACTGGC AAAGGTCAACAAAATATCGAGCTGGTCAACGATTTACAAAACCTCGTCTT CAACGAATTGACTTGtaagtatttcaaaattttggtttttcttttttgag tcTTGAGCTTGTCTTAAATTTCAGCACTATCACCATGCAATACTGTTTCC TtggaatagacgatatcggctttccaaGATGCTTTGAATACTACGTctaa atagacgatatcggctttccgaatgattacccatgatgcattgcgtaaaa aaattcacagacgatattgactttccgtgaattttttgcgcgatgcatca tgggtaatcattcggaaagccgatatcgtctatttagACGTAGTATTCAA AGCATCTTGGTATCGTTTCTTGGTATAGGTAGACCGAGACAAGAGTGAAA GACTTCAGAAGATAATTCGTAAAGTTGAATCCACTTTCTTTTTAGCGAGT GTTGGCGAAGACACAAAACGTGTGAAGATGTTTTTGACAACCTCCAAACT GGAATATGCAAATTATGGGAAATCTGTCCAACTATTGAAGGAAAGATTGA ATTTACCGACAGAAAATACCCATGATGCACTTGGATTTTTGAGGAACACT TGTATGGAACCGTATCAAGCAAGTGAAGCTTATGTGGAAGTTCTTGGTGA TTTGTTCAGAAAGACTGTTCTTACTTGCATCGGTGCTGTAAGTATCGGAT ATTTGCATTCCTGTAATCTCTATCACAAAGCCGACACCCTTATTATACCT TTCGCGACGAGAGTTCCAAGCTTTCGAaaaagataattaaaaaaaaagga aatctcacatcatctttttttttctcggaCCTTTGTCCTTTGTGATTAAT CGTGCTCAAAAATTAACATCCAACTTTTTCCCCCCAGCTGGACACATCAT ACGGAGAAGAATACGGAGATGCTTTGGATTATCAGACCTTCACTGTTGTC AACAATCTTCGAAAAGACGGAAAAATCTTCTTGGATTTCGTTCCCACTTT CACCAAGAAACAATCGCAATATCAAGCCGTCTTCAGAGTGAAAATCCTCC CGGAAGACCAAGCAACATTTAGGTGGGTTTGAgtaaatcattttcaataa CGTTTACAATCAACGCGCTTTATTTGCTAGCTTGATGTTATCTTATTCGT AGCTTTTATGCTCAATTCGGTCTTGCCGGATTTACTAAAGGCCTTAAACT TCTACAAAGCAGGAaactttttcgattttcatcttCTATTTTGTTAACAG GGAGATTCAATCAAAAGCAACCGAACCACTCTTCATGAGAACAACTGAGA AAGTCAACCTTTTCCATTTCGTCAAAAATGATTTGGCAACAAGAACCATG GCTCTTTACCAAGGTAAATATcgagtgaaaaaaattcaactgattttttt cttcttgaaaaAAAGAATGTTGGTTCGTTTTTAATCTACCAGGAATGTTT TGCTCGAGTTTTAGAAGCCAAAATTCCTTTTGACTGAATTTAATCTGAAC TTTTCATTCAGGAGCCAAGACTTCGAACACGTGTCTGGCAAGCATTCAAT TTCACATTGACGAAGTTTGGAGAATGGAACGTTTCGAATCACCACAATAT GCAGAATACAATaaacttcaaaaatatttcttatacgGAGATGAAGAAGA AGCCTTCATGTCACATGTCGTCACCAAACAACCCNCAGAATACAATaaac ttcaaaaatatttcttatacgGAGATGAAGAAGAAGCCTTCATGTCGCAT GTCGTCACCAAGCAACCCGATTTTTACCAGGTAACACTGTCCCTTATATT TCGTGTCTGTTTTCGAGCTAAAAATTCCTACTACCCTAAGAGAagaaaat tttggcgaatgagctCGCTCGCCAATTTTGGTGCAATCTGAcggaatttg ttttgtttatttaataaaatttctaaatttgagaattaattttgacGAAC GAaccatttttgttcaatattttaactTCCTTTCGAAAGTTACCAAGAAC TGTTCATAATTAATCATTGCAAGTAAAATTGGTCTATGAGTATGGTATAG TAATCATGTCTTTCTATTTTCCTTTGCAGGTCGTGCGTCTAGGTGAATTG CCACATTCAGTGGAACCTCAATTATTGAACCTTGGTTTGATGGTTGAATT ACCAGCTATTCCTGGAACTCCATTGACCGTAGATGGTAAAATCATCGACC CTCTTCAAACTACTCGATATGGTGGCAACTACAGAGGTCGGCAATTTGCA GAATGCACAACTTCACTTTTGGTTGGTGGTGAGAATTGCAAAGTGTATTT CGATTCTGAATATTTGAACACACCTGTCACTGGAACTGATTGCTCATTGG TTTGAATCCGTACCATATCACAAACAATTAAATAATAATCTCAGTATATA AAAACCACTTTCTGTTaaattaaatgtttataaaaaattgtaaaaacgaa aaaaaatattcaagttaactacaaagttcaaattttttcataccTTCTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071259TCONS_00071259Clytia hemisphaericatranscript
TCONS_00071260TCONS_00071260Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:858078..865127 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
968.45 1009.72 684.21 615.73 1.59 1.2 0.38 0.55 0.4 0.94 0.44 0.38 0.25 0.28 0.21 0.31 0.21 0.32 0.95 1.14 2.3 1.27 460.59 378.68 0.65 0.25 19.44 24.44 295.62 352.71