TCONS_00017585 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017585
Unique NameTCONS_00017585
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1812

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017585 ID=TCONS_00017585|Name=TCONS_00017585|organism=Clytia hemisphaerica|type=transcript|length=1812bp
AACATTCTATACCAAAGTGAATAGAACTTGTGATTGTGAAACGAGATAAG
CAAGTGTGCTTTGTTCGTGTTGAGGAGCTTTCAGTGATGTAAAACGTCGT
ATTGCCTTTAGTatgaaaatttgattgatttcTCTGGCATGTTTCTACGG
ATTTCAACATGTATTTGCAACAAGTAACAGATGTCGAATCAAACAGCTAT
TCAGTGGATAATTTGGACAAATTCAAACGGACAGATCACCGAGCAAAAAC
AAGATGTTTTGTGCTTTTCGCTCTCTTGTTTACCATTTATCAAATCTCGT
GTTTTTCGAATGGCTGGTTGATCAATGGAGATGAATATTTGGGTTTGTGG
CAACTTTGTTCAGAAAGTGTTGGATGTTTGTGGATGGAACAAAGCCCTTC
CTACGATGTTCCCTTCTTGGATTGGTTTTCAACGGTTCGCGCTTTCCTTC
TTCTAACGTCAATTTTCACCATATTCGCGATGGCTTTTCAAATCGCAAAT
ATTTATTGTGATCAGACCATCTCGATGTTCCCTGTTCGTGTTTGCGCTAT
TTTCAATGTGTTATACCTCTTATTGAGTATTATCATCTTTCCAACGCACA
AACCCAACAACTTTGATGACATCTGGCAACTGGGATGGTCCTATTACGTC
ACTTGTGTTGCTTGCTTACTCAGCATACTTCAAGCTACTATCACTTTCCG
TGTAGGCAGGGAAAACAGGCCTAAAAAAATCTCACCACCGGGAATCTCCG
GACCACCGATCGGCCGAATCCAAATTAACGACCCGACGTCGGCGGAAGGG
GCCGTTGCACGTGACGATTGGACACTCGACGacaaaagtttcttcaataC
AACAGAAGCTGATCCCTTACCTGAGAAGAAGTCTCCCAGCTCCTTATCGA
GTTATAGTGGTGACAATAGTGGCTCTTCGAGTGGGCGTAGCAGTCGTTCG
AGTAGCGTGACAAGCGGGAGTAGCTTTGTAAGTAGTGCTTCGAGTTACTC
GAGTGACTCAGAAAGTATTGGCAAAGAAAGTGATGATCGAATCGATTTGG
TGTGAGTGATGACAATGGACAATTCTTAAACTTTAGTAATTAATGAAAGA
AAGCGAGTTAGTTTCGACTCACTTATATTTTTCTAGATTGAAATAAAGAT
GGGATCgaggaagaaaaaaaaggaCTTTTCATCATCGATGACTATACCTG
TAGAAtattttttacagattttactTTAAACATATTTAGAATCCTTTAGA
AGTCGTATGAtggttaaactttttcattgcCAGTGAAACATTCTTATTGC
CACCCTTTATAACGATAAGATAAAGTCATATCAACTTGTAAGACGGTTAG
CCTCAAGGACATTGCGTGTTGTTTACGCATTTTTACGcagtaatgaaaat
atttttcctggTATGCCCCGAATAAAACAGTGGAAAGATCTTGGAAATGC
GCCAGGAATGTTTCCAGAGAAATTTGAAAGTCTAGCTATCCTACGGTAGC
TTGGCACAGTAACTGTAATATTGAAATATTAGAAGACTAATAACCTtttc
tcgggtgcctaataaatgATATGTATTTTTATAAAGTTAAAGTATCTAGA
GTATTCATTACTAAAGTTTATTTGGTCGTTATGTTCTATTTCATTCCCGG
GGTGGGGGTAATAGGTTTTCGAGATGACGGGTACATATACCGCCTGACTT
TTGGCGGTGGGGCTTTTTGAGGGACTAAAACTAACCCTTAAAGGGACTGA
AATAGAGGAAAAACCAGAATTGTCAAAGATTATATATGACCCTTATTGGG
AGTATTTTGGTT
Run BLAST on NCBI

protein sequence of TCONS_00017585-protein

>TCONS_00017585-protein ID=TCONS_00017585-protein|Name=TCONS_00017585-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
MYLQQVTDVESNSYSVDNLDKFKRTDHRAKTRCFVLFALLFTIYQISCFS
NGWLINGDEYLGLWQLCSESVGCLWMEQSPSYDVPFLDWFSTVRAFLLLT
SIFTIFAMAFQIANIYCDQTISMFPVRVCAIFNVLYLLLSIIIFPTHKPN
NFDDIWQLGWSYYVTCVACLLSILQATITFRVGRENRPKKISPPGISGPP
IGRIQINDPTSAEGAVARDDWTLDDKSFFNTTEADPLPEKKSPSSLSSYS
GDNSGSSSGRSSRSSSVTSGSSFVSSASSYSSDSESIGKESDDRIDLV
Run BLAST on NCBI

transcript from alignment at sc0000271:55981..62898+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017585 ID=TCONS_00017585|Name=TCONS_00017585|organism=Clytia hemisphaerica|type=transcript|length=6918bp|location=Sequence derived from alignment at sc0000271:55981..62898+ (Clytia hemisphaerica)
AACATTCTATACCAAAGTGAATAGAACTTGTGATTGTGAAACGAGATAAG CAAGTGTGCTTTGTTCGTGTTGAGGAGCTTTCAGTGATGTAAAACGTCGT ATTGCCTTTAGTatgaaaatttgattgatttcTCTGGCATGTTTCTACGG ATTTCAACATGTATTTGCAACAAGGTAAAATTTCaacatagctgtcaact ctcccgcattgCGCGGGAGACTCCCGCATTTCTCGACGCGCGTTTAAACC CTTTATCTAAATCGGAATATTACGGAATTATTTGAAAAGTCATTGTCTAA ATTCGCCCGATTTTTCGATCCCGATTTCCCAATAATAATATCCTGATTTC GTGAATTAGAAAGAATCGAATATCGCATTTTTATTCCTAATTTCCCGATT CCCTGATTTTTTTCCTGACTGTTTTTTGAATCTGTTTCTACCGCATTCTA AAATTCTTTGGCTGACTTTTATCTCTTTTACATCGTACACCATTCATAAT TACTTTCATCATTTGGAGTCTTACAAAGTGGCCAACCTTCCTTACATGTT TTGCACtgagaaattttcatttccaattttttgtgaaatttatcACCCAA ATAGTCGCCGTCATGTTTTTCTGCgttttgcctttttttcttAGCATGAT TACGTTCACGCTGCTGAGcttttattttctctttatttttctcataatat tatttttgcttttgtttttgcACTTCTTTTGTCTTAGCTAAATATTcctg atgtttttcttttcgcaaGTCCTTTGTTTTAACCAAATATTCTTTTCGCT TTTGTTTTTGCACTTCTTTTGTCTTAGCTAAATATTcctgatgtttttct tttcgcaaGTCCTTTGTTTTAACCAAATATTCTTTTCGCTTTTCTTTTTG CAAGTTCTTTGTTTTAACTAAATAATCTTTTcgctcatttttatttttct tgtaatattcttttttcttttcttttcgacATCTTTTGTCTTAGCTAAAT ATTCCTTACGcttgtcttttgttttttcGTAATAATTCTtcttatcttca tttttttccctCTTTATAAATTTGCTTCTTAATGAATAGTCCTTTAAATC ACCTTTATCCATCTTTCTTTTTCTCAAAGTTCTAGCTATCTCAAAATGTA CAAGATTTGTTTGATCTGATATGATTTCTTTTACATAAATGCAAAAAAAC CATCCACCCGTTTGAATCTCATAAAGTTGATGCAAGCTTTCATAGCGAAA AGTTGTTTCATTTAAATCATCAATATAGATCCATTCGTTATTATCTAATA CAGCACATGAAAAGTGGTTTCCTTTATGTCTAACAAGACCTCTCAAGGCA TAGTTTTGATCATTTAAGACCAAATTCTTATCATATTTTATCTCATTATC ACCTCCAAATTCTACAAGGTAGATTTTAGGAGTAACAAATGACACTAATG CTGTATCTCtagaaatattttcacacctgcACATTATTGATTTATCAATC GTAATTGGGCTTAAAAGGTTTTGCCATTTATTAAAGTCATCTAAAAGACG CAAGTTTAATTCTGAAACGTAATTTAAAAATGTACTACATTGACGTACCA ATTCTTCACCACAGTTAGAGCATGATCCCTCTAATCTGTAACGTGTCTCA AATAAATCTTTCTCCTGGACTGAAAGATTACAAACAGTCTGTcctgaaaa aatttgagaaaactctGCATTGGCATCACGATTTTCAAAAGATGTACAGT TTGTAATTAAGAAATCCCAAACAGGTTGGCGAATGACAGATaaattttcc tcattttctCTATCGTCTGTAATGTCTGAATTTAAAATGATACTGTAAGA CCTCAAAGAATCTGTtaacaaatcaaaaaataagCTCTGTGTCTCAATTT TGGCAACATAAGAGCCAAACGTAGAATATGCTACTTCCAAAAACGAATCT ACTGCACACGTATACACTGATTCTTGCCGTCTACATGAATTCATAAAATG TAGGTCTCTATTACCTCTATTATTATTGTACATGTAATCATTCTGATCTA TGTGTCCTTCTACTAAACCTTCGACTATATTTTTCTGAGAAATTCCTTCA TAAGAAGGCTGATCAATATTTTCCTGAGAATTTCCTTCATAAGAAGGCTG AAcattatgaatatttttttggcgagcaagtccgctacgtgaagcaacaa aagccccttcGGGGCAAAAAGACTCATTTTTATAGACTCAGGTTATTATT TATCCAAGTgaatcttcaatcttaaaacatttttactGTGAAAAAATGTT CATGAAATATACTCACTTATCATTTTTGCTGAATGAATCAGTGATCAACT TTGGGTTGTATTTTTTTATACGATCCAGTAGTACCTCAGGGGGGTGTCCA AATGCGATGAAGAAATCctaagatacacgtttttttttattagaacacct aaaatttggctgagcctggatgtgcttattttttttagcaattttcagcc taaaatgtttttaaatgcgttcttaatttttcagactactctaaatcgac aatatgataaaaaataaagagcacttaaaatgagcactaaatttggcaaa atttggacaatatttgactctcgatttttgaagatccacccctaaattcg gttaaaactgcttaaaaagaggaaaaaattgtagtttcttgtcttttttt ccaaactgaggccggttagtgtaaaacacaggtcacgggtcacaggtcac gggtcacaggtcacaggtcatacaaattacagaccggaaaactgtaacgc actcgtaacataaAACTCATAGCATAagctcctgaaaatattatatgtaa tgtAAATGtgatatcaaaatatgttatttaaaagacttaaaaatgacaaa tcatcaaccctaaatattgacaacaaatgacacttaaattatgtaaataa tgatgttatctcaaagtatgaggttttgtacaccaattaacatcaaaata tttttcatgcataataggatgctgacgctgcaaatggatatagattgaca ggttttgaaaacaataaatactccgagagagctgttttagagagatgaaa attgtgacgtcattttatcaaaaatacaaagcaagggataaaaatattga aacatttataaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttccaaactgag gctgcgcatgttcttaagatgttcttaatttttcgacgaatttcagccta tatgttcttataaactgggttctaataaaaaaaaacgtgtatatgaaTTT GGTATAAAACTCTTCAGTCATTGCCTTTCCATTCTTGCCTAAGACCCATC GAAATATTTAAGTTTTAATGAATTTGgtgttttcattatattttcacACA ATAAAAATACTGATCCAATTTTCTTTCCCAGTAACAGATGTCGAATCAAA CAGCTATTCAGTGGATAATTTGGACAAATTCAAACGGACAGATCACCGAG CAAAAACAAGATGTTTTGTGCTTTTCGCTCTCTTGTTTACCATTTATCAA ATCTCGTGTTTTTCGAATGGCTGGTTGATCAATGGAGATGAATATTTGGG TTTGTGGCAACTTTGTTCAGAAAGTGTTGGATGTTTGTGGATGGAACAAA GCCCTTCCTACGATGGTATGTACTTAGTAAAATTAAGTTTTCactctaaa aaaatattctatcTACTATACATTGCTATCGATCGATAGCGTCATTTTTT TCAGTAGAATACATACatgttgattattttttcatgaaaagggcttgaga ttaaatttttttatttttttcaaaaaccaaaGGAATATAgccaagtttta tttttctgtcAATAAAACTCTAATAATATAATTTCATTAAAGCcacacac ccccttctcgcagacccagtaggatttttcagccagcgggaataaaaata acggactgaaactcgatggagattgctattctcatattttttatgaatgg agatttcaattcctttttttcaagtcagaaaattcagtttgGATGGGAAA Aagggtaaatattttgcagtgaggattggtttatttgattgttttcagtg gggacaaaaatttgaggataattttccaccggggacgatttttggccaat ttttccagtgggaagggttccaaGTGGGTCTGTGATAAGAGGGTGTATTA GCCAATAGAACAGCTTGGTTTAAGTATTCTTCTTGTCTTTCTCATTTATA GTTCCCTTCTTGGATTGGTTTTCAACGGTTCGCGCTTTCCTTCTTCTAAC GTCAATTTTCACCATATTCGCGATGGCTTTTCAAATCGCAAATATTTATT GTGATCAGACCATCTCGATGTTCCCTGTTCGTGTTTGCGCTATTTTCAAT GGTAAGTTATTCATGTTTccataaaagaatattttttcttgattgtATGC CTTTAttgatcttttaaaaaaacacattttaagcaaaattttatATGATA TAACTCTATTCGATATTTGTATTAAATACCGTGAGAGTATCGCAGTTTTC CTGGACTTGTGCGAATATTAGAGAAATGAGTTTATTAAGAAAAAAATCCT TTAATTAACCCCCAAGAGGCGTAAAAATCTGTATGACGTTTAGGCCTTCA TCCAAGAGGGATCCAAAATTCTTGATGAATATACTATGGTTACCTTTTGT CTCTGGTTGCGCTCTaaatacattaaaggaagaaagtttggcggatttgg cagaTTTGGTCAAAATCTCTCATATAATTTTTTTCGTCATCCACAAAATT AAATTCGCGCTAAATTTAAGTTGCtctatttattcccccaaatgtgtact atttcaggctttaaaacaggtttttccttTCTTGATGgcattttttggac aaaaaaccCCTTTGcgtccaccaaattaaattcccgccaaatttaatttt tcaagttaaccgccaaatggaattccctctgaaaaaactttttcgaatgc atccaccaaattaaattcccgccaaaattccTTTAATGTAGAATCACGAT CTGTCATTACAGTGTATATACATACTCTAATCaatgtgatactcacggta tgGATAGNccgccaaattaaattttcaccaaaatttcttcctttaatgta gaATCGCGATCTGTCATTACAGTGTATATTCATACTCTAGTCaatgtgat actcacggtaaggATAAAAGGGTATTTGAAACaagttttacaaaaacaaa tattttcattacaGTGTTATACCTCTTATTGAGTATTATCATCTTTCCAA CGCACAAACCCAACAACTTTGATGACATCTGGCAACTGGGATGGTCCTAT TACGTCACTTGTGTTGCTTGCTTACTCAGCATACTTCAAGCTACTATCAC TTTCCGTGTAGGCAGGGAAAACAGGCCTAAAAAAATCTCACCACCGGGAA TCTCCGGACCACCGATCGGCCGAATCCAAATTAACGACCCGACGTCGGCG GAAGGGGCCGTTGCACGTGACGATTGGACACTCGACGacaaaagtttctt caataCAACAGAAGCTGATCCCTTACCTGAGAAGAAGTCTCCCAGCTCCT TATCGAGTTATAGTGGTGACAATAGTGGCTCTTCGAGTGGGCGTAGCAGT CGTTCGAGTAGCGTGACAAGCGGGAGTAGCTTTGTAAGTAGTGCTTCGAG TTACTCGAGTGACTCAGAAAGTATTGGCAAAGAAAGTGATGATCGAATCG ATTTGGTGTGAGTGATGACAATGGACAATTCTTAAACTTTAGTAATTAAT GAAAGAAAGCGAGTTAGTTTCGACTCACTTATATTTTTCTAGATTGAAAT AAAGATGGGATCgaggaagaaaaaaaaggaCTTTTCATCATCGATGACTA TACCTGTAGAAtattttttacagattttactTTAAACATATTTAGAATCC TTTAGAAGTCGTATGAtggttaaactttttcattgcCAGTGAAACATTCT TATTGCCACCCTTTATAACGATAAGATAAAGTCATATCAACTTGTAAGAC GGTTAGCCTCAAGGACATTGCGTGTTGTTTACGCATTTTTACGcagtaat gaaaatatttttcctggTATGCCCCGAATAAAACAGTGGAAAGATCTTGG AAATGCGCCAGGAATGTTTCCAGAGAAATTTGAAAGTCTAGCTATCCTAC GGTAGCTTGGCACAGTAACTGTAATATTGAAATATTAGAAGACTAATAAC CTtttctcgggtgcctaataaatgATATGTATTTTTATAAAGTTAAAGTA TCTAGAGTATTCATTACTAAAGTTTATTTGGTCGTTATGTTCTATTTCAT TCCCGGGGTGGGGGTAATAGGTTTTCGAGATGACGGGTACATATACCGCC TGACTTTTGGCGGTGGGGCTTTTTGAGGGACTAAAACTAACCCTTAAAGG GACTGAAATAGAGGAAAAACCAGAATTGTCAAAGATTATATATGACCCTT ATTGGGAGTATTTTGGTT

Coding sequence (CDS) from alignment at sc0000271:55981..62898+

>TCONS_00017585 ID=TCONS_00017585|Name=TCONS_00017585|organism=Clytia hemisphaerica|type=CDS|length=3588bp|location=Sequence derived from alignment at sc0000271:55981..62898+ (Clytia hemisphaerica)
ATGTATTTGCAACAAGTAACAGATGTCGAATCAAACAGCTATTCAGTGGA
TAATTTGGACAAATTCAAACGGACAGATCACCGAGCAAAAACAAGATGTT
TTGTGCTTTTCGCTCTCTTGTTTACCATTTATCAAATCTCGTGTTTTTCG
AATGGCTGGTTGATCAATGGAGATGAATATTTGGGTTTGTGGCAACTTTG
TTCAGAAAGTGTTGGATGTTTGTGGATGGAACAAAGCCCTTCCTACGATG
TTCCCTTCTTGGATTGGTTTTCAACGGTTCGCGCTTTCCTTCTTCTAACG
TCAATTTTCACCATATTCGCGATGGCTTTTCAAATCGCAAATATTTATTG
TGATCAGACCATCTCGATGTTCCCTGTTCGTGTTTGCGCTATTTTCAATG
TGTTATACCTCTTATTGAGTATTATCATCTTTCCAACGCACAAACCCAAC
AACTTTGATGACATCTGGCAACTGGGATGGTCCTATTACGTCACTTGTGT
TGCTTGCTTACTCAGCATACTTCAAGCTACTATCACTTTCCGTGTAGGCA
GGGAAAACAGGCCTAAAAAAATCTCACCACCGGGAATCTCCGGACCACCG
ATCGGCCGAATCCAAATTAACGACCCGACGTCGGCGGAAGGGGCCGTTGC
ACGTGACGATTGGACACTCGACGacaaaagtttcttcaataCAACAGAAG
CTGATCCCTTACCTGAGAAGAAGTCTCCCAGCTCCTTATCGAGTTATAGT
GGTGACAATAGTGGCTCTTCGAGTGGGCGTAGCAGTCGTTCGAGTAGCGT
GACAAGCGGGAGTAGCTTTGTAAGTAGTGCTTCGAGTTACTCGAGTGACT
CAGAAAGTATTGGCAAAGAAAGTGATGATCGAATCGATTTGGTGTGAATG
TATTTGCAACAAGTAACAGATGTCGAATCAAACAGCTATTCAGTGGATAA
TTTGGACAAATTCAAACGGACAGATCACCGAGCAAAAACAAGATGTTTTG
TGCTTTTCGCTCTCTTGTTTACCATTTATCAAATCTCGTGTTTTTCGAAT
GGCTGGTTGATCAATGGAGATGAATATTTGGGTTTGTGGCAACTTTGTTC
AGAAAGTGTTGGATGTTTGTGGATGGAACAAAGCCCTTCCTACGATGTTC
CCTTCTTGGATTGGTTTTCAACGGTTCGCGCTTTCCTTCTTCTAACGTCA
ATTTTCACCATATTCGCGATGGCTTTTCAAATCGCAAATATTTATTGTGA
TCAGACCATCTCGATGTTCCCTGTTCGTGTTTGCGCTATTTTCAATGTGT
TATACCTCTTATTGAGTATTATCATCTTTCCAACGCACAAACCCAACAAC
TTTGATGACATCTGGCAACTGGGATGGTCCTATTACGTCACTTGTGTTGC
TTGCTTACTCAGCATACTTCAAGCTACTATCACTTTCCGTGTAGGCAGGG
AAAACAGGCCTAAAAAAATCTCACCACCGGGAATCTCCGGACCACCGATC
GGCCGAATCCAAATTAACGACCCGACGTCGGCGGAAGGGGCCGTTGCACG
TGACGATTGGACACTCGACGacaaaagtttcttcaataCAACAGAAGCTG
ATCCCTTACCTGAGAAGAAGTCTCCCAGCTCCTTATCGAGTTATAGTGGT
GACAATAGTGGCTCTTCGAGTGGGCGTAGCAGTCGTTCGAGTAGCGTGAC
AAGCGGGAGTAGCTTTGTAAGTAGTGCTTCGAGTTACTCGAGTGACTCAG
AAAGTATTGGCAAAGAAAGTGATGATCGAATCGATTTGGTGTGAATGTAT
TTGCAACAAGTAACAGATGTCGAATCAAACAGCTATTCAGTGGATAATTT
GGACAAATTCAAACGGACAGATCACCGAGCAAAAACAAGATGTTTTGTGC
TTTTCGCTCTCTTGTTTACCATTTATCAAATCTCGTGTTTTTCGAATGGC
TGGTTGATCAATGGAGATGAATATTTGGGTTTGTGGCAACTTTGTTCAGA
AAGTGTTGGATGTTTGTGGATGGAACAAAGCCCTTCCTACGATGTTCCCT
TCTTGGATTGGTTTTCAACGGTTCGCGCTTTCCTTCTTCTAACGTCAATT
TTCACCATATTCGCGATGGCTTTTCAAATCGCAAATATTTATTGTGATCA
GACCATCTCGATGTTCCCTGTTCGTGTTTGCGCTATTTTCAATGTGTTAT
ACCTCTTATTGAGTATTATCATCTTTCCAACGCACAAACCCAACAACTTT
GATGACATCTGGCAACTGGGATGGTCCTATTACGTCACTTGTGTTGCTTG
CTTACTCAGCATACTTCAAGCTACTATCACTTTCCGTGTAGGCAGGGAAA
ACAGGCCTAAAAAAATCTCACCACCGGGAATCTCCGGACCACCGATCGGC
CGAATCCAAATTAACGACCCGACGTCGGCGGAAGGGGCCGTTGCACGTGA
CGATTGGACACTCGACGacaaaagtttcttcaataCAACAGAAGCTGATC
CCTTACCTGAGAAGAAGTCTCCCAGCTCCTTATCGAGTTATAGTGGTGAC
AATAGTGGCTCTTCGAGTGGGCGTAGCAGTCGTTCGAGTAGCGTGACAAG
CGGGAGTAGCTTTGTAAGTAGTGCTTCGAGTTACTCGAGTGACTCAGAAA
GTATTGGCAAAGAAAGTGATGATCGAATCGATTTGGTGTGAATGTATTTG
CAACAAGTAACAGATGTCGAATCAAACAGCTATTCAGTGGATAATTTGGA
CAAATTCAAACGGACAGATCACCGAGCAAAAACAAGATGTTTTGTGCTTT
TCGCTCTCTTGTTTACCATTTATCAAATCTCGTGTTTTTCGAATGGCTGG
TTGATCAATGGAGATGAATATTTGGGTTTGTGGCAACTTTGTTCAGAAAG
TGTTGGATGTTTGTGGATGGAACAAAGCCCTTCCTACGATGTTCCCTTCT
TGGATTGGTTTTCAACGGTTCGCGCTTTCCTTCTTCTAACGTCAATTTTC
ACCATATTCGCGATGGCTTTTCAAATCGCAAATATTTATTGTGATCAGAC
CATCTCGATGTTCCCTGTTCGTGTTTGCGCTATTTTCAATGTGTTATACC
TCTTATTGAGTATTATCATCTTTCCAACGCACAAACCCAACAACTTTGAT
GACATCTGGCAACTGGGATGGTCCTATTACGTCACTTGTGTTGCTTGCTT
ACTCAGCATACTTCAAGCTACTATCACTTTCCGTGTAGGCAGGGAAAACA
GGCCTAAAAAAATCTCACCACCGGGAATCTCCGGACCACCGATCGGCCGA
ATCCAAATTAACGACCCGACGTCGGCGGAAGGGGCCGTTGCACGTGACGA
TTGGACACTCGACGacaaaagtttcttcaataCAACAGAAGCTGATCCCT
TACCTGAGAAGAAGTCTCCCAGCTCCTTATCGAGTTATAGTGGTGACAAT
AGTGGCTCTTCGAGTGGGCGTAGCAGTCGTTCGAGTAGCGTGACAAGCGG
GAGTAGCTTTGTAAGTAGTGCTTCGAGTTACTCGAGTGACTCAGAAAGTA
TTGGCAAAGAAAGTGATGATCGAATCGATTTGGTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009835XLOC_009835Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017585-exon-sc0000271-1491911889:55981..56154TCONS_00017585-exon-sc0000271-1491911889:55981..56154Clytia hemisphaericaexon
TCONS_00017585-exon-sc0000271-1510915933:55981..56154TCONS_00017585-exon-sc0000271-1510915933:55981..56154Clytia hemisphaericaexon
TCONS_00017585-exon-sc0000271-1575043694:55981..56154TCONS_00017585-exon-sc0000271-1575043694:55981..56154Clytia hemisphaericaexon
TCONS_00017585-exon-sc0000271-1491911889:59812..60045TCONS_00017585-exon-sc0000271-1491911889:59812..60045Clytia hemisphaericaexon
TCONS_00017585-exon-sc0000271-1510915933:59812..60045TCONS_00017585-exon-sc0000271-1510915933:59812..60045Clytia hemisphaericaexon
TCONS_00017585-exon-sc0000271-1575043694:59812..60045TCONS_00017585-exon-sc0000271-1575043694:59812..60045Clytia hemisphaericaexon
TCONS_00017585-exon-sc0000271-1491911889:60632..60781TCONS_00017585-exon-sc0000271-1491911889:60632..60781Clytia hemisphaericaexon
TCONS_00017585-exon-sc0000271-1510915933:60632..60781TCONS_00017585-exon-sc0000271-1510915933:60632..60781Clytia hemisphaericaexon
TCONS_00017585-exon-sc0000271-1575043694:60632..60781TCONS_00017585-exon-sc0000271-1575043694:60632..60781Clytia hemisphaericaexon
TCONS_00017585-exon-sc0000271-1491911889:61645..62898TCONS_00017585-exon-sc0000271-1491911889:61645..62898Clytia hemisphaericaexon
TCONS_00017585-exon-sc0000271-1510915933:61645..62898TCONS_00017585-exon-sc0000271-1510915933:61645..62898Clytia hemisphaericaexon
TCONS_00017585-exon-sc0000271-1575043694:61645..62898TCONS_00017585-exon-sc0000271-1575043694:61645..62898Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017585-proteinTCONS_00017585-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000271supercontigsc0000271:55981..62898 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.04021 0.992785 0.000100147 0.000289182 0.000280618 0.000129414 0.000217082 0.000307633 0 0.323419 0.739952 6.11145e-05 6.42639 5.30142 4.07187e-06 0 30.0734 36.6654 9.18656e-05 1.30158e-05 27.2855 28.3396 6.7247 6.34944 14.3286 8.67376 0 6.84424e-05 1.44525e-05 0.000147331
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017585 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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