TCONS_00019118 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019118
Unique NameTCONS_00019118
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1428

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019118 ID=TCONS_00019118|Name=TCONS_00019118|organism=Clytia hemisphaerica|type=transcript|length=1428bp
AAAAATGAGTTTAGAAACTGATCGCGTCAGTCTGCCACTTGGTGAAAATT
CTTCCTTTTCAAATCTTTCAAGCAACAGACCGGTTTCACCCGGTGATACA
ATTAGCAGACAGATCCCACCTCTACCTTACAACAATAGACCAACCCCACC
GGTACCAAGCAGTAGTAGGCCTATCCCATCGCCGCCTAACAACAACAGAT
CCACCCCCACGTCACCTAGCAATATTTCACCTATTGCACCACCACGTTTA
CCAAATTTCACCAGTACAACTGCAAACGTTTCACATcctatactgaatga
aaaaagtaaatCCTGGGCGCCGACGCCTGCCCCAAGGCGTACTGGAAATG
TCACCAAAACTACTTCAGATCATGAAGAAGGTTATGTCACTCTACAACGA
TCGCGTTCTGAAATCGAAAGCTCGTACGTGACAATGCGAAGCACTATACC
ACAACCTCCGCGTACCTCCAATAGAGAAACAGAAGCGTCACGAAATAACA
TGTTTCGAAATTCCCAGAACACTTCTTTAGATTCGAAAGGCTACATCCTT
CAATCTCATCCTCCAGACGTTGATCCATACGCTAACCCTGATCATGTTTT
AACGAACAATAATACTCTTCCCACAAATGATCACCATCAAACGAGGGATT
GTTTTTTACCAACTGAAGCTTATTTTGTTGGAGTAGATCGAGATGATTGT
TACAAGTATTTGGCTGGATGGCCCTTAGGGACTTACTTAATCAGAACGAA
ACGGCGAGATGGGAAAGACGCTTTGGGAGTGAAAGTGTCCAACAAAAACG
ACCCCACTGATGTCAAGCATTACATTATTTTCTTCAAAGAGAAAACATAT
TACTTGGATCGTAACACTGATGAAAGATTCGAAGACGTCTTATCTCTCAT
CAAATATTATCATAGAAACGAATTACCAACTTGCAAACAAAAACTCACAC
AGCCTGTGCTCTGAGGATAACAAGTCTTCTTTTCTCCACGTTGACATGGC
AAAGCTGAGCACATTAGCTTTTACAAGTCACCGAGATTAACTCactagcg
agattatgtatcggagatattctacggctacggttgcggggctgcccatg
cgggtcgtcaccaaaggcgacatgtcgttgtctactttgctctgtacgag
aaaaacaccgtataagcaaagtcgacataatgccgtacgtcaaatatcga
acttgctttcacccgccattacttgccttactcgccatttccctcgccgc
tttagccgtagccgtagagaattccagatacataatctcgctactGAATA
ACCagggatttttttcatttcgaatttacacgctttttctagtataagaa
tacactttatatgaacgtccatgatgaaaatggccctcatggaattttgc
tactcaagctaagaatgctacttttaaa
Run BLAST on NCBI

protein sequence of TCONS_00019118-protein

>TCONS_00019118-protein ID=TCONS_00019118-protein|Name=TCONS_00019118-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
KMSLETDRVSLPLGENSSFSNLSSNRPVSPGDTISRQIPPLPYNNRPTPP
VPSSSRPIPSPPNNNRSTPTSPSNISPIAPPRLPNFTSTTANVSHPILNE
KSKSWAPTPAPRRTGNVTKTTSDHEEGYVTLQRSRSEIESSYVTMRSTIP
QPPRTSNRETEASRNNMFRNSQNTSLDSKGYILQSHPPDVDPYANPDHVL
TNNNTLPTNDHHQTRDCFLPTEAYFVGVDRDDCYKYLAGWPLGTYLIRTK
RRDGKDALGVKVSNKNDPTDVKHYIIFFKEKTYYLDRNTDERFEDVLSLI
KYYHRNELPTCKQKLTQPVL
Run BLAST on NCBI

transcript from alignment at sc0000319:255334..260580-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019118 ID=TCONS_00019118|Name=TCONS_00019118|organism=Clytia hemisphaerica|type=transcript|length=5247bp|location=Sequence derived from alignment at sc0000319:255334..260580- (Clytia hemisphaerica)
AAAAATGAGTTTAGAAACTGATCGCGTCAGTCTGCCACTTGGTGAAAATT CTTCCTTTTCAAATCTTTCAAGCAACAGACCGGTTTCACCCGGTGATACA ATTAGCAGACAGATCCCACCTCTACCTTACAACAATAGACCAACCCCACC GGTACCAAGCAGTAGTAGGCCTATCCCATCGCCGCCTAACAACAACAGAT CCACCCCCACGTCACCTAGCAATATTTCACCTATTGCACCACCACGTTTA CCAAATTTCACCAGTACAACTGCAAACGTTTCACATCCTATACTGAATGA AAAAAGTAAATCCTGGGCGCCGACGCCTGCCCCAAGGCGTACTGGAAATG TCACCAAAACTACTTCAGATCATGAAGAAGGTTATGTCACTCTACAACGA TCGCGTTCTGAAATCGAAAGCTCGTACGTGACAATGCGAAGCACTATACC ACAACCTCCGCGTACCTCCAATAGAGAAACAGAAGCGTCACGAAATAACA TGTTTCGAAATTCCCAGAACACTTCTTTAGATTCGAAAGGCTACATCCTT CAATCTCATCCTCCAGACGTTGATCCATACGCTAACCCTGATCATGTTTT AACGAACAATAATACTCTTCCCACAAATGATCACCATCAAACGAGGGATT GTTTTTTACCAACTGAAGCTTATTTTGTTGGAGTAGATCGAGATGATTGT TACAAGTAATTCTTTAAATCCTTAGCAGATTTACGCAACAAAATTTTCAG CTCAGATATTCTATTTCCAACTTGGTGCCTAAGGTTAAAAGCTGATGAAA TTGTAATTGTCTTGTTCCCTTGTGATAAGGAAGCCATATTTTTTGTACAG GCCTTTGGAATTTCTTCTGGGATTTAAGGCTGTTGAACGGTTCTTAGCTC GTTTCTGAAATTAAGACTTCTGCAGTCATAAAACTATTCTTATAAAAAAC ATGATAAAAAACACGGGCTATTTTAATAATTTTGTCACTTTTTATCTCTT CATCAGGTATTTGGCTGGATGGCCCTTAGGGACTTACTTAATCAGAACGA AACGGCGAGATGGGGTAAGTATGTCTGTTCTCGTCAGTTTACTTAATTCA CCTTCTAAGCTACTTTAGAAACAAATTAGGCTTTTTCCAAAGAAACAAAA AATGAGTGTGTTAAGGACATCGATTTAGGACCCTTTTTTTAGATCTGTGT AATTCGGCAGGTTTAATGAATGAATCTCAACTCCAACAGTGCTTGCTTTA AGAATTGATACCACTTGAAAATATTTCCAATATTTTGTGTGATTTTTGAT TTTCAAAACTAAAGTATATGACCCCCCCTGGATTTTCTCATAACTTCCAT GTGGATAATTTTCTTGTAAAGCCTAGTGGTGCTCAAAATATTCCTTCGAA AAATAATGACAATGTGTTTAAATATTCTCTTCGGCGAAGATTATCTGAAT AATAAAGGCCAACAAGCTAGGAAACCCTTTTCATTTTCTCTTTTCAGAAA GACGCTTTGGGAGTGAAAGTGTCCAACAAAAACGACCCCACTGATGTCAA GCATTACATTATTTTCTTCAAAGTAAGTTGCAGTTGATGTATTCTTTACT TTTGATCCTATTTAAGGTATCATATAAATATAGAAAAAGCTTATTTAAAA AAAGTTAGGTGTGATAATTTTTAAATAAAGGTGGATCTTTCGCTTTGCCA CGCCCTTGCTTAAGAAAAGCTTATTTCGATAGCAAACCTTATAAGTACTT ATTTATACCATTTGATCAGAAAGTTTTCGTAAAGGTCAGAATGACGGTCT GAAAANCTTTTTCCAAAGAAACAAAAAATGAGTGTGTTAAGGACATCGAT TTAGGACCCTTTTTTTAGATCTGTGTAATTCGGCAGGTTTAATGAATGAA TCTCAACTCCAACAGTGCTTGCTTTAAGAATTGATACCACTTGAAAATAT TTCCAATATTTTGTGTGATTTTTGATTTTCAAAACTAAAGTATATGACCC CCCCTGGATTTTCTCATAACTTCCATGTGGATAATTTTCTTGTAAAGCCT AGTGGTGCTCAAAATATTCCTTCGAAAAATAATGACAATGTGTTTAAATA TTCTCTTCGGCGAAGATTATCTGAATAATAAAGGCCAACAAGCTAGGAAA CCCTTTTCATTTTCTCTTTTCAGAAAGACGCTTTGGGAGTGAAAGTGTCC AACAAAAACGACCCCACTGATGTCAAGCATTACATTATTTTCTTCAAAGT AAGTTGCAGTTGATGTATTCTTTACTTTTGATCCTATTTAAGGTATCATA TAAATATAGAAAAAGCTTATTTAAAAAAAGTTAGGTGTGATAATTTTTAA ATAAAGGTGGATCTTTCGCTTTGCCACGCCCTTGCTTAAGAAAAGCTTAT TTCGATAGCAAACCTTATAAGTACTTATTTATACCATTTGATCAGAAAGT TTTCGTAAAGGTCAGAATGACGGTCTGAAAACCTGTTGCATGATAACGTT TCAAAATAAATATTTGAGTTCAATCTCTTTCTTGTGAGAGCGACAACACA AAAAATCTGCTTTTGCGGAAATTTTACAGTACGACGCCCCAAAACTTAAT AAGATCACAAAAGTCAAAATTGGTTTGAAAAGCCTGGTATATTCAATCGC ACTCAGACCCTAGAACATTTGATTCCAAAGCAAATGACTTTCTTTTTTCC CGGCAATCTTCTTTTTCCTCAATCAATAAGCACTATAACAATATTCAACT TAAACGATTTATAAATGAGATTCGAACAACTTGATTTAAAGTGTCAAACC GAAACCACCCACTGGCTAACGTGCTTCTATATCCATATTATATATATATA TTGATGATTTGTGTGCCTTAAATGACAGAGATGAGTTTCATAATTGCTAC AAACAGATTTACCCTAAAGAACTAGATCTCAAAGTTGAGCACCATGGAAA CCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNATTCTTAACTTTTTTCGTTTTTATCAGTTTGAGTTATTTATATATC AATACTTTTCTTTTTCTAAAATGACAGATATTACATATCTTCACTATATA TAGGCACCCGGATGAAGAAATTCTCATCCGACACGCTAAAGCTCTAAAAG GTCGGGAAAATTTTTAACATCTGGAAGGTTTAGAATATGAATTTAGCAAG ACCCTGTCAAGGATTTAGCAGCGAGCGTTTTCGGGGGATTGGCGGGTCCA ACCGAAATATTTTAAGGTTTACGCGCAAGGTTGGTTGGACCCGACTGGGG ATGCGACACATCCGAGGCCGACTTACAATCATCTCCGATGGTATATTGGT CCGCTCCTTTAGAGCTTCAGCGTGGGCGGCCGCCAATACGCCATCGGAAT ATCAGATAACAATACCCATAACAATAATCGATTCCGGCTCTTTTTTTCAT CGCTCAGGAGAAAACATATTACTTGGATCGTAACACTGATGAAAGATTCG AAGACGTCTTATCTCTCATCAAATATTATCATAGAAACGAATTACCAACT TGCAAACAAAAACTCACACAGCCTGTGCTCTGAGGATAACAAGTCTTCTT TTCTCCACGTTGACATGGCAAAGCTGAGCACATTAGCTTTTACAAGTCAC CGAGATTAACTCACTAGCGAGATTATGTATCGGAGATATTCTACGGCTAC GGTTGCGGGGCTGCCCATGCGGGTCGTCACCAAAGGCGACATGTCGTTGT CTACTTTGCTCTGTACGAGAAAAACACCGTATAAGCAAAGTCGACATAAT GCCGTACGTCAAATATCGAACTTGCTTTCACCCGCCATTACTTGCCTTAC TCGCCATTTCCCTCGCCGCTTTAGCCGTAGCCGTAGAGAATTCCAGATAC ATAATCTCGCTACTGAATAACCAGGGATTTTTTTCATTTCGAATTTACAC GCTTTTTCTAGTATAAGAATACACTTTATATGAACGTCCATGATGAAAAT GGCCCTCATGGAATTTTGCTACTCAAGCTAAGAATGCTACTTTTAAA

Coding sequence (CDS) from alignment at sc0000319:255334..260580-

>TCONS_00019118 ID=TCONS_00019118|Name=TCONS_00019118|organism=Clytia hemisphaerica|type=CDS|length=4815bp|location=Sequence derived from alignment at sc0000319:255334..260580- (Clytia hemisphaerica)
GAGAAAACATATTACTTGGATCGTAACACTGATGAAAGATTCGAAGACGT
CTTATCTCTCATCAAATATTATCATAGAAACGAATTACCAACTTGCAAAC
AAAAACTCACACAGCCTGTGCTCTGAATTATTTTCTTCAAAAAAGACGCT
TTGGGAGTGAAAGTGTCCAACAAAAACGACCCCACTGATGTCAAGCATTA
CGTATTTGGCTGGATGGCCCTTAGGGACTTACTTAATCAGAACGAAACGG
CGAGATGGGAAAATGAGTTTAGAAACTGATCGCGTCAGTCTGCCACTTGG
TGAAAATTCTTCCTTTTCAAATCTTTCAAGCAACAGACCGGTTTCACCCG
GTGATACAATTAGCAGACAGATCCCACCTCTACCTTACAACAATAGACCA
ACCCCACCGGTACCAAGCAGTAGTAGGCCTATCCCATCGCCGCCTAACAA
CAACAGATCCACCCCCACGTCACCTAGCAATATTTCACCTATTGCACCAC
CACGTTTACCAAATTTCACCAGTACAACTGCAAACGTTTCACATCCTATA
CTGAATGAAAAAAGTAAATCCTGGGCGCCGACGCCTGCCCCAAGGCGTAC
TGGAAATGTCACCAAAACTACTTCAGATCATGAAGAAGGTTATGTCACTC
TACAACGATCGCGTTCTGAAATCGAAAGCTCGTACGTGACAATGCGAAGC
ACTATACCACAACCTCCGCGTACCTCCAATAGAGAAACAGAAGCGTCACG
AAATAACATGTTTCGAAATTCCCAGAACACTTCTTTAGATTCGAAAGGCT
ACATCCTTCAATCTCATCCTCCAGACGTTGATCCATACGCTAACCCTGAT
CATGTTTTAACGAACAATAATACTCTTCCCACAAATGATCACCATCAAAC
GAGGGATTGTTTTTTACCAACTGAAGCTTATTTTGTTGGAGTAGATCGAG
ATGATTGTTACAAGAGAAAACATATTACTTGGATCGTAACACTGATGAAA
GATTCGAAGACGTCTTATCTCTCATCAAATATTATCATAGAAACGAATTA
CCAACTTGCAAACAAAAACTCACACAGCCTGTGCTCTGAATTATTTTCTT
CAAAAAAGACGCTTTGGGAGTGAAAGTGTCCAACAAAAACGACCCCACTG
ATGTCAAGCATTACGTATTTGGCTGGATGGCCCTTAGGGACTTACTTAAT
CAGAACGAAACGGCGAGATGGGAAAATGAGTTTAGAAACTGATCGCGTCA
GTCTGCCACTTGGTGAAAATTCTTCCTTTTCAAATCTTTCAAGCAACAGA
CCGGTTTCACCCGGTGATACAATTAGCAGACAGATCCCACCTCTACCTTA
CAACAATAGACCAACCCCACCGGTACCAAGCAGTAGTAGGCCTATCCCAT
CGCCGCCTAACAACAACAGATCCACCCCCACGTCACCTAGCAATATTTCA
CCTATTGCACCACCACGTTTACCAAATTTCACCAGTACAACTGCAAACGT
TTCACATCCTATACTGAATGAAAAAAGTAAATCCTGGGCGCCGACGCCTG
CCCCAAGGCGTACTGGAAATGTCACCAAAACTACTTCAGATCATGAAGAA
GGTTATGTCACTCTACAACGATCGCGTTCTGAAATCGAAAGCTCGTACGT
GACAATGCGAAGCACTATACCACAACCTCCGCGTACCTCCAATAGAGAAA
CAGAAGCGTCACGAAATAACATGTTTCGAAATTCCCAGAACACTTCTTTA
GATTCGAAAGGCTACATCCTTCAATCTCATCCTCCAGACGTTGATCCATA
CGCTAACCCTGATCATGTTTTAACGAACAATAATACTCTTCCCACAAATG
ATCACCATCAAACGAGGGATTGTTTTTTACCAACTGAAGCTTATTTTGTT
GGAGTAGATCGAGATGATTGTTACAAGAGAAAACATATTACTTGGATCGT
AACACTGATGAAAGATTCGAAGACGTCTTATCTCTCATCAAATATTATCA
TAGAAACGAATTACCAACTTGCAAACAAAAACTCACACAGCCTGTGCTCT
GAATTATTTTCTTCAAAAAAGACGCTTTGGGAGTGAAAGTGTCCAACAAA
AACGACCCCACTGATGTCAAGCATTACGTATTTGGCTGGATGGCCCTTAG
GGACTTACTTAATCAGAACGAAACGGCGAGATGGGAAAATGAGTTTAGAA
ACTGATCGCGTCAGTCTGCCACTTGGTGAAAATTCTTCCTTTTCAAATCT
TTCAAGCAACAGACCGGTTTCACCCGGTGATACAATTAGCAGACAGATCC
CACCTCTACCTTACAACAATAGACCAACCCCACCGGTACCAAGCAGTAGT
AGGCCTATCCCATCGCCGCCTAACAACAACAGATCCACCCCCACGTCACC
TAGCAATATTTCACCTATTGCACCACCACGTTTACCAAATTTCACCAGTA
CAACTGCAAACGTTTCACATCCTATACTGAATGAAAAAAGTAAATCCTGG
GCGCCGACGCCTGCCCCAAGGCGTACTGGAAATGTCACCAAAACTACTTC
AGATCATGAAGAAGGTTATGTCACTCTACAACGATCGCGTTCTGAAATCG
AAAGCTCGTACGTGACAATGCGAAGCACTATACCACAACCTCCGCGTACC
TCCAATAGAGAAACAGAAGCGTCACGAAATAACATGTTTCGAAATTCCCA
GAACACTTCTTTAGATTCGAAAGGCTACATCCTTCAATCTCATCCTCCAG
ACGTTGATCCATACGCTAACCCTGATCATGTTTTAACGAACAATAATACT
CTTCCCACAAATGATCACCATCAAACGAGGGATTGTTTTTTACCAACTGA
AGCTTATTTTGTTGGAGTAGATCGAGATGATTGTTACAAGAGAAAACATA
TTACTTGGATCGTAACACTGATGAAAGATTCGAAGACGTCTTATCTCTCA
TCAAATATTATCATAGAAACGAATTACCAACTTGCAAACAAAAACTCACA
CAGCCTGTGCTCTGAATTATTTTCTTCAAAAAAGACGCTTTGGGAGTGAA
AGTGTCCAACAAAAACGACCCCACTGATGTCAAGCATTACGTATTTGGCT
GGATGGCCCTTAGGGACTTACTTAATCAGAACGAAACGGCGAGATGGGAA
AATGAGTTTAGAAACTGATCGCGTCAGTCTGCCACTTGGTGAAAATTCTT
CCTTTTCAAATCTTTCAAGCAACAGACCGGTTTCACCCGGTGATACAATT
AGCAGACAGATCCCACCTCTACCTTACAACAATAGACCAACCCCACCGGT
ACCAAGCAGTAGTAGGCCTATCCCATCGCCGCCTAACAACAACAGATCCA
CCCCCACGTCACCTAGCAATATTTCACCTATTGCACCACCACGTTTACCA
AATTTCACCAGTACAACTGCAAACGTTTCACATCCTATACTGAATGAAAA
AAGTAAATCCTGGGCGCCGACGCCTGCCCCAAGGCGTACTGGAAATGTCA
CCAAAACTACTTCAGATCATGAAGAAGGTTATGTCACTCTACAACGATCG
CGTTCTGAAATCGAAAGCTCGTACGTGACAATGCGAAGCACTATACCACA
ACCTCCGCGTACCTCCAATAGAGAAACAGAAGCGTCACGAAATAACATGT
TTCGAAATTCCCAGAACACTTCTTTAGATTCGAAAGGCTACATCCTTCAA
TCTCATCCTCCAGACGTTGATCCATACGCTAACCCTGATCATGTTTTAAC
GAACAATAATACTCTTCCCACAAATGATCACCATCAAACGAGGGATTGTT
TTTTACCAACTGAAGCTTATTTTGTTGGAGTAGATCGAGATGATTGTTAC
AAGAGAAAACATATTACTTGGATCGTAACACTGATGAAAGATTCGAAGAC
GTCTTATCTCTCATCAAATATTATCATAGAAACGAATTACCAACTTGCAA
ACAAAAACTCACACAGCCTGTGCTCTGAATTATTTTCTTCAAAAAAGACG
CTTTGGGAGTGAAAGTGTCCAACAAAAACGACCCCACTGATGTCAAGCAT
TACGTATTTGGCTGGATGGCCCTTAGGGACTTACTTAATCAGAACGAAAC
GGCGAGATGGGAAAATGAGTTTAGAAACTGATCGCGTCAGTCTGCCACTT
GGTGAAAATTCTTCCTTTTCAAATCTTTCAAGCAACAGACCGGTTTCACC
CGGTGATACAATTAGCAGACAGATCCCACCTCTACCTTACAACAATAGAC
CAACCCCACCGGTACCAAGCAGTAGTAGGCCTATCCCATCGCCGCCTAAC
AACAACAGATCCACCCCCACGTCACCTAGCAATATTTCACCTATTGCACC
ACCACGTTTACCAAATTTCACCAGTACAACTGCAAACGTTTCACATCCTA
TACTGAATGAAAAAAGTAAATCCTGGGCGCCGACGCCTGCCCCAAGGCGT
ACTGGAAATGTCACCAAAACTACTTCAGATCATGAAGAAGGTTATGTCAC
TCTACAACGATCGCGTTCTGAAATCGAAAGCTCGTACGTGACAATGCGAA
GCACTATACCACAACCTCCGCGTACCTCCAATAGAGAAACAGAAGCGTCA
CGAAATAACATGTTTCGAAATTCCCAGAACACTTCTTTAGATTCGAAAGG
CTACATCCTTCAATCTCATCCTCCAGACGTTGATCCATACGCTAACCCTG
ATCATGTTTTAACGAACAATAATACTCTTCCCACAAATGATCACCATCAA
ACGAGGGATTGTTTTTTACCAACTGAAGCTTATTTTGTTGGAGTAGATCG
AGATGATTGTTACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010721XLOC_010721Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019118-exon-sc0000319-1575043694:259876..260580TCONS_00019118-exon-sc0000319-1575043694:259876..260580Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1575043694:259517..259574TCONS_00019118-exon-sc0000319-1575043694:259517..259574Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1575043694:259024..259083TCONS_00019118-exon-sc0000319-1575043694:259024..259083Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1575043694:258333..258347TCONS_00019118-exon-sc0000319-1575043694:258333..258347Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1575043694:255334..255923TCONS_00019118-exon-sc0000319-1575043694:255334..255923Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1510915933:259876..260580TCONS_00019118-exon-sc0000319-1510915933:259876..260580Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1510915933:259517..259574TCONS_00019118-exon-sc0000319-1510915933:259517..259574Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1510915933:259024..259083TCONS_00019118-exon-sc0000319-1510915933:259024..259083Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1510915933:258333..258347TCONS_00019118-exon-sc0000319-1510915933:258333..258347Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1510915933:255334..255923TCONS_00019118-exon-sc0000319-1510915933:255334..255923Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1491911889:259876..260580TCONS_00019118-exon-sc0000319-1491911889:259876..260580Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1491911889:259517..259574TCONS_00019118-exon-sc0000319-1491911889:259517..259574Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1491911889:259024..259083TCONS_00019118-exon-sc0000319-1491911889:259024..259083Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1491911889:258333..258347TCONS_00019118-exon-sc0000319-1491911889:258333..258347Clytia hemisphaericaexon
TCONS_00019118-exon-sc0000319-1491911889:255334..255923TCONS_00019118-exon-sc0000319-1491911889:255334..255923Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019118-proteinTCONS_00019118-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000319supercontigsc0000319:255334..260580 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.49419 5.57391 4.49281 8.7246 15.6478 9.81843 13.9554 15.5632 7.57507 2.6727 8.92618 4.7776 0.00979591 1.00811 5.80019 0.080857 1.16648 1.68625 0.0285295 6.02089e-10 4.33983 5.21953 3.28862 4.82674 8.64707 4.09615 2.84919 0.999591 4.41475 5.85404
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000980SH2
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019118 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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