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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021285 ID=TCONS_00021285|Name=TCONS_00021285|organism=Clytia hemisphaerica|type=transcript|length=966bp
NNTTTTGGGGGTGTGGGTTACTTCGTAACCCCTTACACTTATAGTTAGCG
GCTAGTTTAGATCAAGTACACACTGCCCTTCGGGCACACACGACAAGTCC
TCCCGGGACTTTAAGGTCACGACATACCGTAGTCCCAACGGTATTAAGCT
AAGGACACTACACTGCTACGCAGTACCCGCTACGCACCTCAGGCCGTCCG
CGGCTTTCTCAGAGGCTGTCCCGCAGCCCTAGGCGTTTAAGTTATCATTT
ATATTGCATGGTACATCCCCAACGTCACCCCAAATCCTACATCAAGACGC
AGCCACGCAGCAACGCAAAAACTTAAAttacattttcattttacatTCAA
CTCGTTTCGACAATAAATATTTCAGAACTCAATACTTTGTCTCTATTTCT
CTTGTTTCCACTTTGCTTTTTTATTCGATAATTATTGAATCAAAAAACTC
TACATTACGGCCATCTGACGTAGAAATTAATTTATGTTCTgctttacagc
ctggtctccctagagcgatttgcattctctttaagagaatgcagtccgct
tgcaTGCGCTCACTTCGCTAAAACCGTAAGGGCCAATCTACACGgtgttg
agcaattctaaagcaaaaataggatagtcctccagttgctagtgaagata
gggctttctgttacatgaaaacatgaaaaagaagaaaacaagaggcaagt
tcattttccaagaaaacatggttggtcgtggttggtcatgataatgcatg
caaacttttttatggaatttggtgtaatctttggatgttttaaatagttt
tagatcttgtaagactgcttttgattaatttctgttttgctgccctgggt
tgactaggaaacatgggttttcactttcattctctagggagaccaagctc
tataattttagaactttgtatgttgaggtaaattttgttttttctaaaat
tttgagcttggatatc Run BLAST on NCBI transcript from alignment at sc0000380:140865..141830 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021285 ID=TCONS_00021285|Name=TCONS_00021285|organism=Clytia hemisphaerica|type=transcript|length=966bp|location=Sequence derived from alignment at sc0000380:140865..141830 (Clytia hemisphaerica)
gatatccaagctcaaaattttagaaaaaacaaaatttacctcaacataca
aagttctaaaattatagagcttggtctccctagagaatgaaagtgaaaac
ccatgtttcctagtcaacccagggcagcaaaacagaaattaatcaaaagc
agtcttacaagatctaaaactatttaaaacatccaaagattacaccaaat
tccataaaaaagtttgcatgcattatcatgaccaaccacgaccaaccatg
ttttcttggaaaatgaacttgcctcttgttttcttctttttcatgttttc
atgtaacagaaagccctatcttcactagcaactggaggactatcctattt
ttgctttagaattgctcaacacCGTGTAGATTGGCCCTTACGGTTTTAGC
GAAGTGAGCGCAtgcaagcggactgcattctcttaaagagaatgcaaatc
gctctagggagaccaggctgtaaagcAGAACATAAATTAATTTCTACGTC
AGATGGCCGTAATGTAGAGTTTTTTGATTCAATAATTATCGAATAAAAAA
GCAAAGTGGAAACAAGAGAAATAGAGACAAAGTATTGAGTTCTGAAATAT
TTATTGTCGAAACGAGTTGAatgtaaaatgaaaatgtaaTTTAAGTTTTT
GCGTTGCTGCGTGGCTGCGTCTTGATGTAGGATTTGGGGTGACGTTGGGG
ATGTACCATGCAATATAAATGATAACTTAAACGCCTAGGGCTGCGGGACA
GCCTCTGAGAAAGCCGCGGACGGCCTGAGGTGCGTAGCGGGTACTGCGTA
GCAGTGTAGTGTCCTTAGCTTAATACCGTTGGGACTACGGTATGTCGTGA
CCTTAAAGTCCCGGGAGGACTTGTCGTGTGTGCCCGAAGGGCAGTGTGTA
CTTGATCTAAACTAGCCGCTAACTATAAGTGTAAGGGGTTACGAAGTAAC
CCACACCCCCAAAANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021285-exon-sc0000380-1491911889:140865..141830 | TCONS_00021285-exon-sc0000380-1491911889:140865..141830 | Clytia hemisphaerica | exon |
| TCONS_00021285-exon-sc0000380-1510915933:140865..141830 | TCONS_00021285-exon-sc0000380-1510915933:140865..141830 | Clytia hemisphaerica | exon |
| TCONS_00021285-exon-sc0000380-1575043694:140865..141830 | TCONS_00021285-exon-sc0000380-1575043694:140865..141830 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000380 | supercontig | sc0000380:140865..141830 . |
Blast
The following BLAST results are available for this feature:
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